ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal29a01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z28347.1|HVPLASC1 H.vulgare (NK 1558) gene for plastocyanin Length = 1884 Score = 896 bits (452), Expect = 0.0 Identities = 478/486 (98%), Gaps = 8/486 (1%) Strand = Plus / Plus Query: 45 gccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctg 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1094 gccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctg 1153 Query: 105 ggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgag 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1154 ggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgag 1213 Query: 165 accatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgcc 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1214 accatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgcc 1273 Query: 225 gtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggc 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1274 gtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggc 1333 Query: 285 gagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccccac 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1334 gagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccccac 1393 Query: 345 gctggggccggcatggtcggaaaggtcaccgtcaactaatgaagctaccaatttgggtcg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 gctggggccggcatggtcggaaaggtcaccgtcaactaatgaagctaccaatttgggtcg 1453 Query: 405 attgatcgctcaaattggacgtgtcgtcatgcatgcatcatattgattaattgtacgcta 464 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1454 attgatcgctcaaattggacgtgtcg---tgcatgcatcatattgattaattgtacgcta 1510 Query: 465 tatgtatgtatatgttt-----tctactctactctactctataagatcgatgaggctctt 519 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1511 tatgtatgtatatgttttctactctactctactctactctataagatcgatgaggctctt 1570 Query: 520 cgtgat 525 |||||| Sbjct: 1571 cgtgat 1576 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 2 cttggctaggctagctctcctcctctgcattacgtagcaagcagccatggccgcc 56 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 919 cttggctaggctagctctcctcctctgcagtacgtagcaagcagccatggccgcc 973
>emb|Y00704.1|HVPCR Barley mRNA for plastocyanin precursor Length = 662 Score = 896 bits (452), Expect = 0.0 Identities = 478/486 (98%), Gaps = 8/486 (1%) Strand = Plus / Plus Query: 45 gccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctg 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctg 239 Query: 105 ggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgag 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 ggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgag 299 Query: 165 accatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgcc 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 accatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgcc 359 Query: 225 gtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggc 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggc 419 Query: 285 gagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccccac 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 gagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccccac 479 Query: 345 gctggggccggcatggtcggaaaggtcaccgtcaactaatgaagctaccaatttgggtcg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 gctggggccggcatggtcggaaaggtcaccgtcaactaatgaagctaccaatttgggtcg 539 Query: 405 attgatcgctcaaattggacgtgtcgtcatgcatgcatcatattgattaattgtacgcta 464 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 540 attgatcgctcaaattggacgtgtcg---tgcatgcatcatattgattaattgtacgcta 596 Query: 465 tatgtatgtatatgttt-----tctactctactctactctataagatcgatgaggctctt 519 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 597 tatgtatgtatatgttttctactctactctactctactctataagatcgatgaggctctt 656 Query: 520 cgtgat 525 |||||| Sbjct: 657 cgtgat 662 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 2 cttggctaggctagctctcctcctctgcattacgtagcaagcagccatggccgcc 56 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 5 cttggctaggctagctctcctcctctgcagtacgtagcaagcagccatggccgcc 59
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 369 bits (186), Expect = 6e-99 Identities = 299/336 (88%), Gaps = 3/336 (0%) Strand = Plus / Minus Query: 49 tggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctgggtg 108 |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| || || | Sbjct: 148989 tggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgcttctcggcg 148933 Query: 109 ccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgagacca 168 |||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 148932 ccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggcgagacca 148873 Query: 169 tcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccgtgc 228 |||| ||||||||||||||||| | ||| |||||||||||||||||||||||||| || | Sbjct: 148872 tcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggacgcggttc 148813 Query: 229 cctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggcgaga 288 | |||||||||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 148812 cgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgcccccggcgaga 148753 Query: 289 ccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccccacgctg 348 ||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 148752 ccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccgcacgccg 148693 Query: 349 gggccggcatggtcggaaaggtcaccgtcaactaat 384 | || || |||||||| ||||||||||||||||||| Sbjct: 148692 gagctgggatggtcggcaaggtcaccgtcaactaat 148657
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 369 bits (186), Expect = 6e-99 Identities = 299/336 (88%), Gaps = 3/336 (0%) Strand = Plus / Minus Query: 49 tggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctgggtg 108 |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| || || | Sbjct: 13885 tggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgcttctcggcg 13829 Query: 109 ccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgagacca 168 |||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 13828 ccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggcgagacca 13769 Query: 169 tcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccgtgc 228 |||| ||||||||||||||||| | ||| |||||||||||||||||||||||||| || | Sbjct: 13768 tcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggacgcggttc 13709 Query: 229 cctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggcgaga 288 | |||||||||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 13708 cgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgcccccggcgaga 13649 Query: 289 ccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccccacgctg 348 ||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 13648 ccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccgcacgccg 13589 Query: 349 gggccggcatggtcggaaaggtcaccgtcaactaat 384 | || || |||||||| ||||||||||||||||||| Sbjct: 13588 gagctgggatggtcggcaaggtcaccgtcaactaat 13553
>dbj|AK070447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049C22, full insert sequence Length = 703 Score = 369 bits (186), Expect = 6e-99 Identities = 299/336 (88%), Gaps = 3/336 (0%) Strand = Plus / Plus Query: 49 tggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctgggtg 108 |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| || || | Sbjct: 200 tggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgcttctcggcg 256 Query: 109 ccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgagacca 168 |||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 257 ccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggcgagacca 316 Query: 169 tcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccgtgc 228 |||| ||||||||||||||||| | ||| |||||||||||||||||||||||||| || | Sbjct: 317 tcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggacgcggttc 376 Query: 229 cctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggcgaga 288 | |||||||||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 377 cgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgcccccggcgaga 436 Query: 289 ccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccccacgctg 348 ||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 437 ccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccgcacgccg 496 Query: 349 gggccggcatggtcggaaaggtcaccgtcaactaat 384 | || || |||||||| ||||||||||||||||||| Sbjct: 497 gagctgggatggtcggcaaggtcaccgtcaactaat 532
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 369 bits (186), Expect = 6e-99 Identities = 299/336 (88%), Gaps = 3/336 (0%) Strand = Plus / Plus Query: 49 tggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctgggtg 108 |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| || || | Sbjct: 71553 tggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgcttctcggcg 71609 Query: 109 ccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgagacca 168 |||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 71610 ccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggcgagacca 71669 Query: 169 tcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccgtgc 228 |||| ||||||||||||||||| | ||| |||||||||||||||||||||||||| || | Sbjct: 71670 tcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggacgcggttc 71729 Query: 229 cctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggcgaga 288 | |||||||||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 71730 cgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgcccccggcgaga 71789 Query: 289 ccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccccacgctg 348 ||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 71790 ccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccgcacgccg 71849 Query: 349 gggccggcatggtcggaaaggtcaccgtcaactaat 384 | || || |||||||| ||||||||||||||||||| Sbjct: 71850 gagctgggatggtcggcaaggtcaccgtcaactaat 71885
>gb|AF093636.1|AF093636 Oryza sativa plastocyanin precursor, mRNA, complete cds Length = 676 Score = 369 bits (186), Expect = 6e-99 Identities = 299/336 (88%), Gaps = 3/336 (0%) Strand = Plus / Plus Query: 49 tggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctgggtg 108 |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| || || | Sbjct: 182 tggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgcttctcggcg 238 Query: 109 ccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgagacca 168 |||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 239 ccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggcgagacca 298 Query: 169 tcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccgtgc 228 |||| ||||||||||||||||| | ||| |||||||||||||||||||||||||| || | Sbjct: 299 tcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggacgcggttc 358 Query: 229 cctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggcgaga 288 | |||||||||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 359 cgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgcccccggcgaga 418 Query: 289 ccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccccacgctg 348 ||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 419 ccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccgcacgccg 478 Query: 349 gggccggcatggtcggaaaggtcaccgtcaactaat 384 | || || |||||||| ||||||||||||||||||| Sbjct: 479 gagctgggatggtcggcaaggtcaccgtcaactaat 514
>gb|AF009412.1|AF009412 Oryza sativa plastocyanin precursor, mRNA, complete cds Length = 745 Score = 331 bits (167), Expect = 1e-87 Identities = 294/336 (87%), Gaps = 3/336 (0%) Strand = Plus / Plus Query: 49 tggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctgggtg 108 |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| || || | Sbjct: 194 tggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgcttctcggcg 250 Query: 109 ccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgagacca 168 |||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 251 ccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggcgagacca 310 Query: 169 tcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccgtgc 228 |||| ||||||||||||||||| | ||| |||||||||||||||||| ||||||| || | Sbjct: 311 tcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacaaggacgcggttc 370 Query: 229 cctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggcgaga 288 | ||||||| || | ||||| || || ||||||||||||||||||||||||||||||| Sbjct: 371 cgagcggcgtcaacttgtccaaaatatcgcaggaggagtacctcaacgcccccggcgaga 430 Query: 289 ccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccccacgctg 348 ||||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||| | Sbjct: 431 ccttctccgtcacgctcaccgtccccggcacatacggnttctactgcgagccgcacgccg 490 Query: 349 gggccggcatggtcggaaaggtcaccgtcaactaat 384 | || || |||||||| ||||||||||||||||||| Sbjct: 491 gagctgggatggtcggcaaggtcaccgtcaactaat 526
>gb|AY104253.1| Zea mays PCO133617 mRNA sequence Length = 1001 Score = 246 bits (124), Expect = 6e-62 Identities = 238/276 (86%) Strand = Plus / Plus Query: 116 cggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgagaccatcacctt 175 ||||| ||| || |||||||||| | | |||| ||||||||||||||| |||||||| || Sbjct: 462 cggcgggctcgtcttcgagcccagccagttcaccgtcaaggccggcgacaccatcacatt 521 Query: 176 caagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccgtgccctccgg 235 ||||||||||||||| | |||||||||||| || |||||||| |||| ||||| ||| Sbjct: 522 caagaacaacgccggcttcccgcacaacgtcgtcttcgacgaagacgaggtgccgagcgg 581 Query: 236 cgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggcgagaccttctc 295 |||||||| | |||||||||| |||||||||||||||||||| || |||||||||| ||| Sbjct: 582 cgtcgacgccaccaagatctcgcaggaggagtacctcaacgcgccaggcgagacctactc 641 Query: 296 cgtcaccctcaccgtccccggcacctacggcttctactgcgagccccacgctggggccgg 355 ||||||||||||||| || || ||||||||||||||||||||||| || || ||||| Sbjct: 642 cgtcaccctcaccgtgccgggaacctacggcttctactgcgagccgcatcaaggagccgg 701 Query: 356 catggtcggaaaggtcaccgtcaactaatgaagcta 391 |||||||| ||| ||||||||||||||| |||||| Sbjct: 702 aatggtcggcaagatcaccgtcaactaattaagcta 737
>gb|AY614612.1| Ulva pertusa plastocyanin precursor, mRNA, complete cds; nuclear gene for plastid product Length = 787 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 313 ccggcacctacggcttctactgcgagccccacgctggggccggcatg 359 ||||||| |||||| |||||||||||||||| ||||| ||||||||| Sbjct: 390 ccggcacatacggcgtctactgcgagccccatgctggcgccggcatg 436
>gb|AF031545.1|AF031545 Fritillaria agrestis plastocyanin (ploc) mRNA, complete cds Length = 720 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 174 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgagga 220 ||||||||||||||||||| ||||||||| ||| ||||||| ||||| Sbjct: 320 ttcaagaacaacgccgggttcccgcacaatgtgttgttcgatgagga 366
>ref|NM_106259.2| Arabidopsis thaliana copper ion binding / electron transporter AT1G76100 mRNA, complete cds Length = 771 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 174 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 222 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 326 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 374
>gb|BT025525.1| Arabidopsis thaliana At1g76100 mRNA, complete cds Length = 516 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 174 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 222 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 301 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 349
>emb|Z83321.1|ATZ83321 A.thaliana 16 kb chromosome 1 DNA fragment Length = 16202 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 174 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 222 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 8687 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 8735
>gb|BT021977.1| Arabidopsis thaliana At1g76100 mRNA, complete cds Length = 746 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 174 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 222 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 337 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 385
>gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana BAC T23E18 from chromosome I, complete sequence Length = 97554 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 174 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 222 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 10610 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 10562
>emb|X02965.1|SPPCYA Silene pratensis mRNA for plastocyanin precursor Length = 773 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 168 atcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgagga 220 |||||||||||||||||||| |||| ||| ||||| || || ||||||||||| Sbjct: 350 atcaccttcaagaacaacgctgggttcccacacaatgtcgtcttcgacgagga 402
>gb|M20937.1|ATHPCG A.thaliana plastocyanin gene, complete cds Length = 1447 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 174 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 222 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 957 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 1005
>emb|X04693.1|SOPCG Spinach gene for plastocyanin Length = 1000 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 174 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccgtgccctcc 233 ||||||||||| ||||| | ||| |||||||| ||||| |||||||||| | |||||| Sbjct: 542 ttcaagaacaatgccggattcccccacaacgtagtgtttgacgaggacgagattccctcc 601 Query: 234 ggcgtcgacg 243 || ||||||| Sbjct: 602 ggtgtcgacg 611
>gb|DQ226793.1| Boechera divaricarpa isolate SLW-B-C02 mRNA sequence Length = 701 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 174 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 222 ||||||||||| || |||| ||| |||||||| |||||||| ||||||| Sbjct: 343 ttcaagaacaatgctgggttcccacacaacgttgtgttcgatgaggacg 391
>gb|J05524.1|CREAPCYN C.reinhardtii apoplastocyanin (PC6-2) mRNA, complete cds Length = 577 Score = 48.1 bits (24), Expect = 0.030 Identities = 72/88 (81%) Strand = Plus / Plus Query: 151 tcaaggccggcgagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgt 210 ||||| ||||||||||| | | |||| ||||||||| || | ||| |||||| | || | Sbjct: 227 tcaagtccggcgagaccgtgaacttcgtgaacaacgctggcttcccccacaacatcgtct 286 Query: 211 tcgacgaggacgccgtgccctccggcgt 238 |||||||||| ||| | ||||||||||| Sbjct: 287 tcgacgaggatgccatcccctccggcgt 314 Score = 44.1 bits (22), Expect = 0.47 Identities = 79/98 (80%) Strand = Plus / Plus Query: 267 tacctcaacgcccccggcgagaccttctccgtcaccctcaccgtccccggcacctacggc 326 ||||| ||||||||||||||||||| ||| || | || |||| ||||| |||||| Sbjct: 343 tacctgaacgcccccggcgagacctactcggtgaagctgaccgctgccggcgagtacggc 402 Query: 327 ttctactgcgagccccacgctggggccggcatggtcgg 364 | |||||||||||||||| || || ||||||||||| Sbjct: 403 tactactgcgagccccaccagggcgctggcatggtcgg 440
>emb|Z50186.1|PNPCBMR P.nigra mRNA for plastocyanin b Length = 699 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 173 cttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgc 223 |||||||||||| ||||||| ||| || ||||| | |||||||||||||| Sbjct: 322 cttcaagaacaatgccgggttcccacataacgttctcttcgacgaggacgc 372
>gb|AC007594.5| Drosophila melanogaster, chromosome 3R, region 87B-87C, BAC clone BACR28I14, complete sequence Length = 161601 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 463 tatatgtatgtatatgttttcta 485 ||||||||||||||||||||||| Sbjct: 14878 tatatgtatgtatatgttttcta 14856
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 42 gcagccatggccgccggcgccatgctgctgg 72 ||||||||||||| ||||||||||| ||||| Sbjct: 4826405 gcagccatggccggcggcgccatgccgctgg 4826435
>gb|AC009741.5|AC009741 Drosophila melanogaster, chromosome 3R, region 87B-87B, BAC clone BACR44K17, complete sequence Length = 166863 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 463 tatatgtatgtatatgttttcta 485 ||||||||||||||||||||||| Sbjct: 137841 tatatgtatgtatatgttttcta 137819
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 42 gcagccatggccgccggcgccatgctgctgg 72 ||||||||||||| ||||||||||| ||||| Sbjct: 106995 gcagccatggccggcggcgccatgccgctgg 107025
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 42 gcagccatggccgccggcgccatgctgctgg 72 ||||||||||||| ||||||||||| ||||| Sbjct: 68564 gcagccatggccggcggcgccatgccgctgg 68594
>gb|AE003695.2| Drosophila melanogaster chromosome 3R, section 33 of 118 of the complete sequence Length = 225655 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 463 tatatgtatgtatatgttttcta 485 ||||||||||||||||||||||| Sbjct: 169136 tatatgtatgtatatgttttcta 169114
>gb|M97702.1|DROGLUSTD Drosophila melanogaster glutathione S-transferase gene Length = 14707 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 463 tatatgtatgtatatgttttcta 485 ||||||||||||||||||||||| Sbjct: 8840 tatatgtatgtatatgttttcta 8862
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Minus Query: 315 ggcacctacggcttctactgcgagccccacgctggggccggcatggtcgg 364 |||||||||| || |||||||||||||||| || || ||||||||||| Sbjct: 962984 ggcacctacgactactactgcgagccccaccgcggtgctggcatggtcgg 962935
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 44.1 bits (22), Expect = 0.47 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 ctactgcgagccccacgctggggccggcatggtcggaaaggt 370 |||||||||||||||| ||| ||||||||||| || ||||| Sbjct: 903783 ctactgcgagccccaccgtggtgccggcatggttggcaaggt 903742
>gb|DQ122875.1| Chlamydomonas incerta chloroplast plastocyanin (petE) mRNA, complete cds; nuclear gene for chloroplast product Length = 620 Score = 44.1 bits (22), Expect = 0.47 Identities = 64/78 (82%) Strand = Plus / Plus Query: 267 tacctcaacgcccccggcgagaccttctccgtcaccctcaccgtccccggcacctacggc 326 ||||| ||||||||||||||||||| ||| ||| || ||| | ||||| |||||| Sbjct: 364 tacctgaacgcccccggcgagacctactcgctcaagctgaccaccgccggcgagtacggc 423 Query: 327 ttctactgcgagccccac 344 | |||||||||||||||| Sbjct: 424 tactactgcgagccccac 441 Score = 44.1 bits (22), Expect = 0.47 Identities = 73/90 (81%) Strand = Plus / Plus Query: 149 cgtcaaggccggcgagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggt 208 ||||||| ||||||||||||| | |||| ||||||||| || | ||| |||||| | || Sbjct: 246 cgtcaagtccggcgagaccattaacttcgtgaacaacgctggcttcccccacaacatcgt 305 Query: 209 gttcgacgaggacgccgtgccctccggcgt 238 ||||| ||||| ||| | ||||| ||||| Sbjct: 306 cttcgatgaggatgccatcccctcgggcgt 335
>gb|AC023740.4| Drosophila melanogaster X BAC RP98-27J18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163764 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 479 ttttctactctactctactcta 500 |||||||||||||||||||||| Sbjct: 79575 ttttctactctactctactcta 79554
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 gccggcgccatgctgctgggcg 75 |||||||||||||||||||||| Sbjct: 4921238 gccggcgccatgctgctgggcg 4921217
>gb|AC119572.26| Ustilago hordei strain 4875-4 clone uhobac-5d9, complete sequence Length = 152059 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 157 ccggcgagaccatcaccttcaa 178 |||||||||||||||||||||| Sbjct: 108213 ccggcgagaccatcaccttcaa 108234
>gb|AE012090.1| Xanthomonas axonopodis pv. citri str. 306, section 468 of 469 of the complete genome Length = 10947 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 gccggcgccatgctgctgggcg 75 |||||||||||||||||||||| Sbjct: 5924 gccggcgccatgctgctgggcg 5903
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 tgggtgccaacggcggcgtgct 124 |||||||||||||||||||||| Sbjct: 1090565 tgggtgccaacggcggcgtgct 1090586
>emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain 364 Length = 526707 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 157 ccggcgagaccatcaccttcaa 178 |||||||||||||||||||||| Sbjct: 478061 ccggcgagaccatcaccttcaa 478082
>gb|AE003435.3| Drosophila melanogaster chromosome X, section 19 of 74 of the complete sequence Length = 290042 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 479 ttttctactctactctactcta 500 |||||||||||||||||||||| Sbjct: 5079 ttttctactctactctactcta 5058
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 gccggcgccatgctgctgggcg 75 |||||||||||||||||||||| Sbjct: 4922474 gccggcgccatgctgctgggcg 4922453
>gb|L07282.1|CREPETE Chlamydomonas reinhardtii plastocyanin (petE) gene, complete cds Length = 3380 Score = 44.1 bits (22), Expect = 0.47 Identities = 64/78 (82%) Strand = Plus / Plus Query: 267 tacctcaacgcccccggcgagaccttctccgtcaccctcaccgtccccggcacctacggc 326 ||||| ||||||||||||||||||| ||| || | || |||| ||||| |||||| Sbjct: 2589 tacctgaacgcccccggcgagacctactcggtgaagctgaccgctgccggcgagtacggc 2648 Query: 327 ttctactgcgagccccac 344 | |||||||||||||||| Sbjct: 2649 tactactgcgagccccac 2666
>dbj|AB026687.1| Physcomitrella patens mRNA for plastocyanin precursor, complete cds Length = 816 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 311 ccccggcacctacggcttctactgcgagcc 340 |||||||||||||| |||||||||||||| Sbjct: 504 ccccggcacctacgagttctactgcgagcc 533
>gb|AC099576.12| Mus musculus chromosome 3, clone RP23-93G15, complete sequence Length = 156835 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctata 502 ||||||||||||||||||||| Sbjct: 10739 tctactctactctactctata 10719
>gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, complete sequence Length = 178764 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactctat 501 ||||||||||||||||||||| Sbjct: 81036 ttctactctactctactctat 81016 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 81111 ttctactctactctactcta 81092 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 81060 tctactctactctactctat 81041
>gb|AC150415.3| Branchiostoma floridae clone CH302-62D14, complete sequence Length = 147823 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 tttctactctactctactcta 500 ||||||||||||||||||||| Sbjct: 9733 tttctactctactctactcta 9753
>gb|AF101236.1| Naja sputatrix neutral phospholipase A2 (NPLA2) gene, complete cds Length = 5879 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctata 502 ||||||||||||||||||||| Sbjct: 5187 tctactctactctactctata 5167 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 5229 ttctactctactctactcta 5210 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 5218 tctactctactctactctat 5199 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 5193 ttctactctactctactcta 5174
>gb|AF101235.1| Naja sputatrix acidic phospholipase A2 (APLA2) gene, complete cds Length = 5879 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctata 502 ||||||||||||||||||||| Sbjct: 5187 tctactctactctactctata 5167 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 5229 ttctactctactctactcta 5210 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 5218 tctactctactctactctat 5199 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 5193 ttctactctactctactcta 5174
>gb|AC074257.5| Homo sapiens BAC clone RP11-796I2 from 7, complete sequence Length = 186047 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 aggctagctctcctcctctgc 29 ||||||||||||||||||||| Sbjct: 148698 aggctagctctcctcctctgc 148678
>gb|AC112273.4| Mus musculus BAC clone RP24-122H5 from 3, complete sequence Length = 180155 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactctat 501 ||||||||||||||||||||| Sbjct: 23610 ttctactctactctactctat 23590
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 agaccatcaccttcaagaaca 183 ||||||||||||||||||||| Sbjct: 1887121 agaccatcaccttcaagaaca 1887141
>emb|AL390056.7| Human DNA sequence from clone RP3-493I16 on chromosome 6 Contains the 5' end of the RAB3IP2 gene for RAB3 interacting protein 2 and a CpG island, complete sequence Length = 62390 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 464 atatgtatgtatatgttttct 484 ||||||||||||||||||||| Sbjct: 54158 atatgtatgtatatgttttct 54178
>gb|AC128655.8| Homo sapiens 3 BAC RP11-260O18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 88017 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 tatatgtatgtatatgttttc 483 ||||||||||||||||||||| Sbjct: 15105 tatatgtatgtatatgttttc 15125
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 cggcgagaccatcaccttcaagaac 182 |||| |||||||||||||||||||| Sbjct: 246840 cggcaagaccatcaccttcaagaac 246816
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 tggtgttcgacgaggacgccg 225 ||||||||||||||||||||| Sbjct: 9760 tggtgttcgacgaggacgccg 9780
>dbj|AB223673.1| Aspergillus oryzae cDNA, contig sequence: AoEST0513 Length = 679 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 136 ccaacgacttcagcgtcaaggccgg 160 |||||||||||| |||||||||||| Sbjct: 209 ccaacgacttcaccgtcaaggccgg 233
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 136 ccaacgacttcagcgtcaaggccgg 160 |||||||||||| |||||||||||| Sbjct: 1916264 ccaacgacttcaccgtcaaggccgg 1916240
>gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, complete sequence Length = 214702 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 463 tatatgtatgtatatgttttc 483 ||||||||||||||||||||| Sbjct: 80609 tatatgtatgtatatgttttc 80589
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 cgtcaaggccggcgagaccat 169 ||||||||||||||||||||| Sbjct: 1713828 cgtcaaggccggcgagaccat 1713808
>gb|AC159909.8| Mus musculus 10 BAC RP23-312M21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184546 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 ttctactctactctactctat 501 ||||||||||||||||||||| Sbjct: 101275 ttctactctactctactctat 101295 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 101295 ttctactctactctactcta 101314
>gb|AF260581.1|AF260581 Amycolatopsis mediterranei plasmid pHGF8002 tripeptidyl aminopeptidase gene, partial cds; 3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase gene, complete cds; and 2,5 dichloro-2,5 cyclohexadiene-1,4 diol dehydrogenase gene, partial cds Length = 2049 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 219 gacgccgtgccctccggcgtcgacg 243 |||||||||||| |||||||||||| Sbjct: 182 gacgccgtgcccgccggcgtcgacg 158
>gb|AC153941.3| Mus musculus 10 BAC RP24-403F8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 205654 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 ttctactctactctactctat 501 ||||||||||||||||||||| Sbjct: 19418 ttctactctactctactctat 19438 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 19438 ttctactctactctactcta 19457
>emb|CR788232.9| Zebrafish DNA sequence from clone DKEY-283M16 in linkage group 2, complete sequence Length = 70979 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 ttctactctactctactctat 501 ||||||||||||||||||||| Sbjct: 60677 ttctactctactctactctat 60697
>dbj|AP004948.1| Lotus japonicus genomic DNA, chromosome , clone:LjT35I07, TM0121b, complete sequence Length = 56086 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 168 atcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgagga 220 ||||| ||||||||||| || || | ||| |||||||| || ||||||||||| Sbjct: 47310 atcacgttcaagaacaatgctggtttccctcacaacgttgtcttcgacgagga 47362
>gb|AC115939.8| Mus musculus chromosome 3, clone RP24-549I13, complete sequence Length = 178373 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactctat 501 ||||||||||||||||||||| Sbjct: 172943 ttctactctactctactctat 172923
>gb|AC099884.12| Mus musculus chromosome 15, clone RP23-11F24, complete sequence Length = 265797 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 456 tgtacgctatatgtatgtatatgt 479 |||||| ||||||||||||||||| Sbjct: 81926 tgtacgatatatgtatgtatatgt 81949
>gb|AC123743.11| Mus musculus chromosome 5, clone RP24-116M4, complete sequence Length = 177350 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 19643 tctactctactctactctat 19624
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 caacggcggcgtgctggtgt 129 |||||||||||||||||||| Sbjct: 1000597 caacggcggcgtgctggtgt 1000616
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 cggcggcgtgctggtgttcg 132 |||||||||||||||||||| Sbjct: 1997585 cggcggcgtgctggtgttcg 1997604
>gb|AC005179.1| Homo sapiens chromosome 5, P1 clone 1041F10 (LBNL H88), complete sequence Length = 59765 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 atgtatgtatatgttttcta 485 |||||||||||||||||||| Sbjct: 37299 atgtatgtatatgttttcta 37318
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 gttcgacgaggacgccgtgccctc 232 |||| ||||||||||||||||||| Sbjct: 4219622 gttcaacgaggacgccgtgccctc 4219645
>gb|AC122283.3| Mus musculus BAC clone RP23-242G6 from chromosome 10, complete sequence Length = 184346 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 137767 tctactctactctactctat 137748
>gb|AC140291.2| Mus musculus BAC clone RP24-326N12 from chromosome 5, complete sequence Length = 167269 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 59328 tctactctactctactctat 59347
>gb|AC147876.1| Homo sapiens BAC clone RP11-718M20 from 4, complete sequence Length = 119938 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 23507 ttctactctactctactcta 23526
>gb|AY491539.1| Nicotiana tabacum voucher Et4-10 ERT10 (ERT10) mRNA, partial cds Length = 457 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 174 ttcaagaacaacgccgggtacccgcacaacgt 205 ||||||||||| ||||||| ||| |||||||| Sbjct: 246 ttcaagaacaatgccgggttcccccacaacgt 277
>gb|AC139350.3| Mus musculus BAC clone RP24-254D18 from chromosome 15, complete sequence Length = 161300 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 40812 tatatgtatgtatatgtttt 40793
>gb|AC141437.4| Mus musculus BAC clone RP23-283O7 from chromosome 19, complete sequence Length = 134644 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ccaagatctcccaggaggag 266 |||||||||||||||||||| Sbjct: 74211 ccaagatctcccaggaggag 74230
>emb|CT025613.9| Mouse DNA sequence from clone RP23-208M16 on chromosome 13, complete sequence Length = 166222 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 23419 ttctactctactctactcta 23400 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 23358 tctactctactctactctat 23339
>emb|Z99292.1|SPAC17A2 S.pombe chromosome I cosmid c17A2 Length = 36642 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 27445 tctactctactctactctat 27464
>ref|XM_960955.1| Plasmodium falciparum 3D7 DNA repair protein (rad50) partial mRNA Length = 6711 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 3409 tatatgtatgtatatgtttt 3390
>ref|XM_572256.1| Cryptococcus neoformans var. neoformans JEC21 Rab guanyl-nucleotide exchange factor (CNH00630) partial mRNA Length = 3246 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 caacggcggcgtgctggtgt 129 |||||||||||||||||||| Sbjct: 111 caacggcggcgtgctggtgt 130
>gb|AC127412.4| Mus musculus BAC clone RP23-234O14 from chromosome 16, complete sequence Length = 225685 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 132159 tctactctactctactctat 132178
>gb|AC108409.8| Mus musculus chromosome 19, clone RP23-84G7, complete sequence Length = 270854 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 237396 ttctactctactctactcta 237377 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 237385 tctactctactctactctat 237366
>gb|AC143339.12| Medicago truncatula clone mth2-20g20, complete sequence Length = 99993 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 97019 tatatgtatgtatatgtttt 97038
>gb|AC160629.6| Medicago truncatula clone mth2-24p23, complete sequence Length = 64145 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 14997 tatatgtatgtatatgtttt 15016
>emb|CR339051.6| Zebrafish DNA sequence from clone DKEY-223N8 in linkage group 7, complete sequence Length = 176851 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 5751 ttctactctactctactcta 5770
>gb|AC147365.4| Medicago truncatula clone mth2-10f9, complete sequence Length = 89850 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 64661 tatatgtatgtatatgtttt 64642
>emb|Z99291.1|HS308I13 Human DNA sequence from clone RP1-308I13 on chromosome 1p35-36.3 Contains part of a novel gene, complete sequence Length = 96608 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 atgcatcatattgattaatt 456 |||||||||||||||||||| Sbjct: 33691 atgcatcatattgattaatt 33672
>emb|AL445204.3| Human DNA sequence from clone RP11-232K22 on chromosome 13 Contains the 3' end of a novel gene, complete sequence Length = 129923 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 5678 tctactctactctactctat 5659
>emb|AL355512.22| Human DNA sequence from clone RP11-525A16 on chromosome 10 Contains the DUSP5 gene for dual specificity phosphatase 5 (HVH3), two novel genes, a high-mobility group box 3 (HMGB3) pseudogene and a CpG island, complete sequence Length = 199785 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 tatgtatgtatatgttttct 484 |||||||||||||||||||| Sbjct: 154770 tatgtatgtatatgttttct 154751
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 caaggccggcgagaccatca 171 |||||||||||||||||||| Sbjct: 2396512 caaggccggcgagaccatca 2396531
>emb|AL157780.12| Human DNA sequence from clone RP11-98E22 on chromosome 9q33.1-33.3 Contains a CpG island, complete sequence Length = 160114 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 156120 tctactctactctactctat 156139 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 156050 tctactctactctactctat 156069 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 156044 ttctactctactctactcta 156063
>gb|AC055713.29| Homo sapiens 12 BAC RP11-486O12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 118312 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 38497 tctactctactctactctat 38516
>gb|AC092982.3| Homo sapiens 3q BAC RP11-758I14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 189219 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 87652 tatatgtatgtatatgtttt 87671
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 catcaccttcaagaacaacgccgg 190 |||||||||||| ||||||||||| Sbjct: 1002222 catcaccttcaacaacaacgccgg 1002199
>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5 Length = 349418 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 241110 tatatgtatgtatatgtttt 241129
>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland Research Institute) complete sequence Length = 147560 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 452 taattgtacgctatatgtatgtatatgt 479 |||||||| | ||||||||||||||||| Sbjct: 13474 taattgtatgttatatgtatgtatatgt 13447
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 gttcgacgaggacgccgtgccctc 232 |||| ||||||||||||||||||| Sbjct: 60577 gttcaacgaggacgccgtgccctc 60600
>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7 Length = 349213 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 313 ccggcacctacggcttctactgcgagccccac 344 ||||||||| || || |||||||||||||||| Sbjct: 59995 ccggcaccttcgactactactgcgagccccac 60026
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 gttcgacgaggacgccgtgccctc 232 |||| ||||||||||||||||||| Sbjct: 96604 gttcaacgaggacgccgtgccctc 96627
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 ccgtcaccctcaccgtccccggca 318 |||||||| ||||||||||||||| Sbjct: 231553 ccgtcaccgtcaccgtccccggca 231576
>emb|AL662936.4|OSJN00137 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052P16, complete sequence Length = 155702 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 atgtatgtatatgttttcta 485 |||||||||||||||||||| Sbjct: 155318 atgtatgtatatgttttcta 155299
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 acgcccccggcgagaccttc 293 |||||||||||||||||||| Sbjct: 76965 acgcccccggcgagaccttc 76984
>emb|AJ010302.1|RSP010302 Rhodobacter sphaeroides photosynthetic gene cluster Length = 40707 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cggcggcgtgctggtgttcg 132 |||||||||||||||||||| Sbjct: 23564 cggcggcgtgctggtgttcg 23545
>emb|AL844607.4| Mouse DNA sequence from clone RP24-280G18 on chromosome 4, complete sequence Length = 160298 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 accatcaccttcaagaacaa 184 |||||||||||||||||||| Sbjct: 5651 accatcaccttcaagaacaa 5632
>emb|AL844601.4| Mouse DNA sequence from clone RP23-245J22 on chromosome 4, complete sequence Length = 166294 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 12615 tctactctactctactctat 12596
>emb|CR456624.7| Zebrafish DNA sequence from clone CH211-69E5 in linkage group 13, complete sequence Length = 172195 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 cgctatatgtatgtatatgt 479 |||||||||||||||||||| Sbjct: 90542 cgctatatgtatgtatatgt 90561
>gb|AC107909.5| Homo sapiens chromosome 8, clone CTD-2340D6, complete sequence Length = 149001 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 9980 ttctactctactctactcta 9961 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 9929 tctactctactctactctat 9910
>emb|BX470065.7| Zebrafish DNA sequence from clone DKEY-105H11 in linkage group 24, complete sequence Length = 198444 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 142819 tatatgtatgtatatgtttt 142838
>emb|BX465841.9| Zebrafish DNA sequence from clone CH211-198K5 in linkage group 21, complete sequence Length = 83186 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 28723 ttctactctactctactcta 28704 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 28717 tctactctactctactctat 28698 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 28656 ttctactctactctactcta 28637 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 28645 tctactctactctactctat 28626 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 28584 ttctactctactctactcta 28565 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 28573 tctactctactctactctat 28554
>gb|AC104986.5| Homo sapiens chromosome 8, clone RP11-410L14, complete sequence Length = 153411 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 22913 tctactctactctactctat 22932
>gb|DQ450368.1| Uncultured bacterium clone X16 16S ribosomal RNA gene, partial sequence Length = 361 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ggtgttcgacgaggacgccg 225 |||||||||||||||||||| Sbjct: 67 ggtgttcgacgaggacgccg 86
>gb|AC026339.23| Homo sapiens 12 BAC RP11-109A15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55087 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 38098 ttctactctactctactcta 38079 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 38057 tctactctactctactctat 38038
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 cggcgagaccatcaccttcaagaa 181 |||| ||||||||||||||||||| Sbjct: 1631008 cggcaagaccatcaccttcaagaa 1631031
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 40 aagcagccatggccgccggcgccatgctgctgggcg 75 |||| ||| ||||||||| |||| |||||||||||| Sbjct: 4469642 aagccgccctggccgccgacgccgtgctgctgggcg 4469677
>gb|AF195122.1| Rhodobacter sphaeroides photosynthetic gene cluster, partial sequence Length = 66280 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cggcggcgtgctggtgttcg 132 |||||||||||||||||||| Sbjct: 48670 cggcggcgtgctggtgttcg 48651
>gb|AC097513.2| Homo sapiens BAC clone RP11-419E3 from 4, complete sequence Length = 151389 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 atatgtatgtatatgttttc 483 |||||||||||||||||||| Sbjct: 75049 atatgtatgtatatgttttc 75068
>gb|AC182460.2| Gallus gallus BAC clone CH261-132N3 from chromosome ul, complete sequence Length = 212965 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 159833 tctactctactctactctat 159814
>gb|AC009309.4| Homo sapiens BAC clone RP11-301O19 from 2, complete sequence Length = 170720 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 162484 tctactctactctactctat 162465
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 gcgccatgctgctgggcggg 77 |||||||||||||||||||| Sbjct: 3039756 gcgccatgctgctgggcggg 3039775
>gb|AC177806.2| Gallus gallus BAC clone CH261-13L12 from chromosome ul, complete sequence Length = 250495 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 89054 tctactctactctactctat 89035
>emb|AL844155.6| Mouse DNA sequence from clone RP23-163L4 on chromosome 2, complete sequence Length = 193188 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 38955 ttctactctactctactcta 38936 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 38904 tctactctactctactctat 38885
>emb|BX936465.15| Zebrafish DNA sequence from clone CH211-95J16 in linkage group 18, complete sequence Length = 116706 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 4677 tatatgtatgtatatgtttt 4696
>gb|AC124805.3| Branchiostoma floridae, clone -25B24, complete sequence Length = 67731 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 41208 tctactctactctactctat 41227
>gb|AC160392.2| Mus musculus BAC clone RP23-240E9 from chromosome 9, complete sequence Length = 199695 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 69008 ttctactctactctactcta 68989
>dbj|AK036340.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630059E20 product:unclassifiable, full insert sequence Length = 4703 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 2984 ttctactctactctactcta 2965
>gb|AC009110.10| Homo sapiens chromosome 16 clone RP11-467O15, complete sequence Length = 188763 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 95794 tctactctactctactctat 95813
>gb|AC007351.40|AC007351 Homo sapiens 12 BAC RP11-492N15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 195501 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 101952 ttctactctactctactcta 101933
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 agaccatcaccttcaagaac 182 |||||||||||||||||||| Sbjct: 4353267 agaccatcaccttcaagaac 4353248
>gb|AC007082.5|AC007082 Drosophila melanogaster, chromosome 2L, region 37D, BAC clone BACR28G24, complete sequence Length = 171375 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 atatgtatgtatatgttttc 483 |||||||||||||||||||| Sbjct: 57060 atatgtatgtatatgttttc 57041
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 atgtatgtatatgttttcta 485 |||||||||||||||||||| Sbjct: 5454669 atgtatgtatatgttttcta 5454650
>gb|AC048340.24| Homo sapiens 12 BAC RP11-469A24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 76354 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 44137 tctactctactctactctat 44156
>gb|AC157523.2| Pan troglodytes BAC clone CH251-526G6 from chromosome unknown, complete sequence Length = 165776 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 63718 tctactctactctactctat 63737 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 63682 ttctactctactctactcta 63701
>gb|AC022415.5|AC022415 Homo sapiens chromosome 19 clone CTC-359D24, complete sequence Length = 180510 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 119818 ttctactctactctactcta 119837
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 tggtgttcgagcccaacgac 143 |||||||||||||||||||| Sbjct: 454459 tggtgttcgagcccaacgac 454478
>gb|AC013354.6|AC013354 Genomic sequence for Arabidopsis thaliana BAC F15H18 from chromosome I, complete sequence Length = 95327 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 79932 tctactctactctactctat 79913
>gb|AC104201.12| Mus musculus chromosome 19, clone RP24-531I1, complete sequence Length = 166165 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 28549 ttctactctactctactcta 28530 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 28538 tctactctactctactctat 28519
>gb|AC129949.4| Branchiostoma floridae, clone -25H14, complete sequence Length = 71462 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 9007 tctactctactctactctat 8988
>gb|AC096554.1| Homo sapiens BAC clone RP11-76I14 from 2, complete sequence Length = 144683 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 112788 tctactctactctactctat 112807 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 112752 ttctactctactctactcta 112771
>gb|AC084288.9| Mus musculus Strain C57BL6/J Chromosome 2 BAC, RP23-108H5, complete sequence Length = 200393 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 47308 tctactctactctactctat 47327 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 47257 ttctactctactctactcta 47276
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ggtgttcgacgaggacgccg 225 |||||||||||||||||||| Sbjct: 55231 ggtgttcgacgaggacgccg 55212
>gb|AC108857.13| Mus musculus chromosome 1, clone RP24-389A10, complete sequence Length = 190617 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 34978 tctactctactctactctat 34997
>gb|AC135388.2| Homo sapiens 12 BAC RP11-474D1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85801 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 17044 tctactctactctactctat 17063 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 16998 ttctactctactctactcta 17017
>gb|AC069551.4|AC069551 Genomic sequence for Arabidopsis thaliana BAC T10O22 from chromosome I, complete sequence Length = 92948 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 88074 tctactctactctactctat 88093
>dbj|AB006038.1| Cyprinus carpio cERK1 mRNA for extracellular signal regulated protein kinase 1, complete cds Length = 1539 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 1533 tatatgtatgtatatgtttt 1514
>emb|Z50185.1|PNPCAMR P.nigra mRNA for plastocyanin a Length = 721 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 173 cttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgagga 220 |||||||||||| ||||| | ||| |||||| | || ||||||||||| Sbjct: 334 cttcaagaacaatgccggattcccacacaacattgtcttcgacgagga 381
>gb|AF114235.1|AF114235 Scenedesmus obliquus plastocyanin (Pcy) gene, Pcy-1 allele, complete cds Length = 3736 Score = 40.1 bits (20), Expect = 7.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 333 tgcgagccccacgctggggccggcatggtcggaaaggtca 372 |||||||||||| || |||||||||||||| ||||||| Sbjct: 3122 tgcgagccccaccagggcgccggcatggtcggcaaggtca 3161
>emb|CR925781.6| Zebrafish DNA sequence from clone DKEY-3B23 in linkage group 10, complete sequence Length = 202134 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 atgcatcatattgattaatt 456 |||||||||||||||||||| Sbjct: 88397 atgcatcatattgattaatt 88416
>emb|BX927197.7| Zebrafish DNA sequence from clone DKEY-28F16 in linkage group 18, complete sequence Length = 70511 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 3618 tatatgtatgtatatgtttt 3637
>emb|AL135928.6| Human DNA sequence from clone RP4-534P7 on chromosome 1 Contains the 5' end of a gene for a beta 1,3-N-acetylgalactosaminyltransferase-II (MGC39558) protein and a mitochondrial cytochrome b (MTCYB) pocessed pseudogene, complete sequence Length = 82939 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 73022 tatatgtatgtatatgtttt 73003
>gb|AE003662.3| Drosophila melanogaster chromosome 2L, section 71 of 83 of the complete sequence Length = 266205 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 atatgtatgtatatgttttc 483 |||||||||||||||||||| Sbjct: 188632 atatgtatgtatatgttttc 188613
>gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32 of 73 of the complete sequence Length = 291923 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 ctatatgtatgtatatgttt 481 |||||||||||||||||||| Sbjct: 56082 ctatatgtatgtatatgttt 56101
>dbj|AP004835.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-629D8, complete sequence Length = 134743 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 129615 ttctactctactctactcta 129596
>gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, region 50A2-50A3, P1 clones DS08976 and DS01149, complete sequence Length = 129605 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 ctatatgtatgtatatgttt 481 |||||||||||||||||||| Sbjct: 96938 ctatatgtatgtatatgttt 96957
>dbj|AP002778.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-643C11, complete sequence Length = 160242 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 11908 ttctactctactctactcta 11889
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 ataagatcgatgaggctctt 519 |||||||||||||||||||| Sbjct: 1855669 ataagatcgatgaggctctt 1855650
>gb|AC150407.2| Branchiostoma floridae clone CH302-54J24, complete sequence Length = 175896 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 61340 tctactctactctactctat 61321
>emb|BX901974.11| Zebrafish DNA sequence from clone DKEY-30F3 in linkage group 3, complete sequence Length = 192650 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 123053 tatatgtatgtatatgtttt 123034
>gb|AC150390.2| Branchiostoma floridae clone CH302-115N8, complete sequence Length = 230518 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 tttctactctactctactct 499 |||||||||||||||||||| Sbjct: 157630 tttctactctactctactct 157611 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 137910 tctactctactctactctat 137891
>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01, complete sequence Length = 150283 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 atgtatgtatatgttttcta 485 |||||||||||||||||||| Sbjct: 9299 atgtatgtatatgttttcta 9280
>gb|AF017642.1|AF017642 Rhodobacter sphaeroides magnesium chelatase subunits BchI (bchI) and BchD (bchD) genes, complete cds; and BchO (bchO) gene, partial cds Length = 3154 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 cggcggcgtgctggtgttcg 132 |||||||||||||||||||| Sbjct: 87 cggcggcgtgctggtgttcg 106
>emb|BX000989.10| Mouse DNA sequence from clone RP23-33D17 on chromosome 4, complete sequence Length = 236166 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 183219 ttctactctactctactcta 183200 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 183198 tctactctactctactctat 183179
>gb|AD000012.1|MSGY126 Mycobacterium tuberculosis sequence from clone y126 Length = 37164 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 gttcgacgaggacgccgtgccctc 232 |||| ||||||||||||||||||| Sbjct: 13958 gttcaacgaggacgccgtgccctc 13981
>emb|AL731697.16| Mouse DNA sequence from clone RP23-188L7 on chromosome X, complete sequence Length = 200250 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 121408 tctactctactctactctat 121389
>emb|AL844882.9| Mouse DNA sequence from clone RP23-360H15 on chromosome 2, complete sequence Length = 167978 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 72111 tatatgtatgtatatgtttt 72130
>emb|AL772278.7| Mouse DNA sequence from clone RP23-416G5 on chromosome 4, complete sequence Length = 199565 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 21610 tatatgtatgtatatgtttt 21629
>emb|AL806522.4| Mouse DNA sequence from clone RP23-167H2 on chromosome 2, complete sequence Length = 189104 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 128602 ttctactctactctactcta 128621
>gb|AC138594.10| Mus musculus chromosome 7, clone RP24-283N22, complete sequence Length = 167184 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 tatatgtatgtatatgtttt 482 |||||||||||||||||||| Sbjct: 99158 tatatgtatgtatatgtttt 99139
>dbj|AP004294.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1651H12 Length = 180236 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttctactctactctactcta 500 |||||||||||||||||||| Sbjct: 48006 ttctactctactctactcta 47987 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tctactctactctactctat 501 |||||||||||||||||||| Sbjct: 47965 tctactctactctactctat 47946
>dbj|AP004369.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-448P19, complete sequences Length = 158310 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 tatgtatgtatatgttttct 484 |||||||||||||||||||| Sbjct: 81398 tatgtatgtatatgttttct 81417 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,075,939 Number of Sequences: 3902068 Number of extensions: 4075939 Number of successful extensions: 126728 Number of sequences better than 10.0: 169 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 124256 Number of HSP's gapped (non-prelim): 2420 length of query: 541 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 518 effective length of database: 17,143,297,704 effective search space: 8880228210672 effective search space used: 8880228210672 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
