ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal28k23 |
|---|---|
| Clone Library Name | barley_pub |
>MOT2_HUMAN (O60669) Monocarboxylate transporter 2 (MCT 2)| Length = 478 Score = 36.2 bits (82), Expect = 0.096 Identities = 27/78 (34%), Positives = 37/78 (47%) Frame = +2 Query: 62 ETIEIFFNYVQRIFKNIFDHAEQISKAMVARGYRGDPSKHKIYFLAESSFGIVDALSLLC 241 + + +FF +Q+IF + IS M+A Y G P + S +V A LLC Sbjct: 38 KAVTVFFKEIQQIFHTTYSEIAWISSIMLAVMYAGGPVS-SVLVNKYGSRPVVIAGGLLC 96 Query: 242 LLAVMGLASFSERLV*WY 295 L M LASFS +V Y Sbjct: 97 CLG-MVLASFSSSVVQLY 113
>NRAM1_RAT (P70553) Natural resistance-associated macrophage protein 1 (NRAMP| 1) Length = 507 Score = 31.2 bits (69), Expect = 3.1 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +2 Query: 107 NIFDHAEQISKAMVARGYRGDPSKHKIYFLAESSFGI-VDALSLLCLLAVMGLASFSE 277 NI+ H+ + V R RGD + +YFL E++ + V + L ++AV G A + + Sbjct: 212 NIYLHSALVKSREVDRTRRGDVREANMYFLTEATIALFVSFIINLFVMAVFGQAFYQQ 269
>MOT2_RAT (Q63344) Monocarboxylate transporter 2 (MCT 2)| Length = 489 Score = 31.2 bits (69), Expect = 3.1 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Frame = +2 Query: 62 ETIEIFFNYVQRIFKNIFDHAEQISKAMVARGYRGDPSKHKIYFLAESSFGIVDAL---S 232 + + +FFN ++ IFK IS M+A Y G P I + +++G L Sbjct: 44 KAVTVFFNDIKDIFKTTSSQIAWISSIMLAVMYAGGP----ISSVLVNNYGSRPVLIVGG 99 Query: 233 LLCLLAVMGLASFSERLV*WY 295 LLC ++ LASFS ++ Y Sbjct: 100 LLCCTGMI-LASFSSSVIELY 119
>MOT2_MESAU (P53988) Monocarboxylate transporter 2 (MCT 2)| Length = 484 Score = 30.4 bits (67), Expect = 5.2 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Frame = +2 Query: 62 ETIEIFFNYVQRIFKNIFDHAEQISKAMVARGYRGDPSKHKIYFLAESSFG---IVDALS 232 + + +FF +Q+IF+ + IS M+A Y G P I + +++G +V Sbjct: 39 KAVTVFFKDIQQIFQASYSEIAWISSIMLAVMYAGGP----ISSVLVNNYGSRPVVIIGG 94 Query: 233 LLCLLAVMGLASFSERLV*WY 295 LLC ++ LASFS ++ Y Sbjct: 95 LLCCTGMI-LASFSNSVLELY 114
>NRAM1_CHICK (P51027) Natural resistance-associated macrophage protein 1 (NRAMP| 1) Length = 555 Score = 30.0 bits (66), Expect = 6.9 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = +2 Query: 107 NIFDHAEQISKAMVARGYRGDPSKHKIYFLAESSFGI-VDALSLLCLLAVMGLASFSER 280 NIF H+ + + R + + + +YFL ES + V L L ++AV G A + +R Sbjct: 261 NIFLHSSLVKTRAIDRSKKEEVKEANMYFLTESCLALFVSFLINLFVMAVFGEAFYHQR 319
>MOT2_MOUSE (O70451) Monocarboxylate transporter 2 (MCT 2)| Length = 484 Score = 30.0 bits (66), Expect = 6.9 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Frame = +2 Query: 62 ETIEIFFNYVQRIFKNIFDHAEQISKAMVARGYRGDPSKHKIYFLAESSFG---IVDALS 232 + + +FF +Q IF IS M+A Y G P I + +++G +V Sbjct: 39 KAVTVFFKDIQEIFNTTSSQIAWISSIMLAVMYAGGP----ISSVLVNNYGSRPVVIVGG 94 Query: 233 LLCLLAVMGLASFSERLV*WY 295 LLC + ++ LAS+S ++ Y Sbjct: 95 LLCCIGMI-LASYSNSVIELY 114
>NRAM1_CEREL (P56436) Natural resistance-associated macrophage protein 1 (NRAMP| 1) Length = 548 Score = 30.0 bits (66), Expect = 6.9 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +2 Query: 107 NIFDHAEQISKAMVARGYRGDPSKHKIYFLAESSFGI-VDALSLLCLLAVMGLASFSE 277 NI+ H+ + V R R D + +YFL E++ + V L L ++AV G A + + Sbjct: 253 NIYLHSSLVKSREVDRSRRADIREANMYFLIEATIALSVSFLINLFVMAVFGQAFYKQ 310
>NRAM1_BUBBU (Q27946) Natural resistance-associated macrophage protein 1 (NRAMP| 1) Length = 548 Score = 30.0 bits (66), Expect = 6.9 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +2 Query: 107 NIFDHAEQISKAMVARGYRGDPSKHKIYFLAESSFGI-VDALSLLCLLAVMGLASFSE 277 NI+ H+ + V R R D + +YFL E++ + V L L ++AV G A + + Sbjct: 253 NIYLHSSLVKSREVDRSRRADIREANMYFLIEATIALSVSFLINLFVMAVFGQAFYKQ 310
>NRAM1_BOVIN (Q27981) Natural resistance-associated macrophage protein 1 (NRAMP| 1) Length = 548 Score = 30.0 bits (66), Expect = 6.9 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +2 Query: 107 NIFDHAEQISKAMVARGYRGDPSKHKIYFLAESSFGI-VDALSLLCLLAVMGLASFSE 277 NI+ H+ + V R R D + +YFL E++ + V L L ++AV G A + + Sbjct: 253 NIYLHSSLVKSREVDRSRRADIREANMYFLIEATIALSVSFLINLFVMAVFGQAFYKQ 310
>NRAM1_BISBI (Q95102) Natural resistance-associated macrophage protein 1 (NRAMP| 1) Length = 548 Score = 30.0 bits (66), Expect = 6.9 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +2 Query: 107 NIFDHAEQISKAMVARGYRGDPSKHKIYFLAESSFGI-VDALSLLCLLAVMGLASFSE 277 NI+ H+ + V R R D + +YFL E++ + V L L ++AV G A + + Sbjct: 253 NIYLHSSLVKSREVDRSRRADIREANMYFLIEATIALSVSFLINLFVMAVFGQAFYKQ 310
>CHS5_USTMA (O13394) Chitin synthase 5 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 5) (Class-IV chitin synthase 5) Length = 1239 Score = 29.6 bits (65), Expect = 9.0 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +2 Query: 155 GYRGDPSKHKIYFLAESSFGIVDALSL 235 GYR + KHK + A+S F + D LSL Sbjct: 558 GYRPNARKHKSFLPAKSRFSVADPLSL 584 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,684,365 Number of Sequences: 219361 Number of extensions: 2090829 Number of successful extensions: 4773 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 4657 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4772 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
