ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal28j19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (E... 39 0.003
2GSTXA_ARATH (P46421) Glutathione S-transferase 103-1A (EC 2.5.1.18) 35 0.045
3GSTX1_TOBAC (Q03662) Probable glutathione S-transferase (EC 2.5.... 33 0.22
4GSTX2_TOBAC (Q03663) Probable glutathione S-transferase (EC 2.5.... 32 0.29
5GSTX3_TOBAC (Q03664) Probable glutathione S-transferase (EC 2.5.... 32 0.38
6GSTZ2_ARATH (Q9ZVQ4) Probable glutathione S-transferase zeta-cla... 32 0.50
7GSTZ1_ARATH (Q9ZVQ3) Glutathione S-transferase zeta-class 1 (EC ... 31 0.85
8GSTZ_EUPES (P57108) Glutathione S-transferase zeta class (EC 2.5... 30 1.5
9MAAI_VIBCH (Q9KSB2) Probable maleylacetoacetate isomerase (EC 5.... 30 1.5
10GSTX6_SOYBN (P32110) Probable glutathione S-transferase (EC 2.5.... 30 1.9
11YMI3_YEAST (Q04526) Hypothetical 47.3 kDa protein in TUB1-CPR3 i... 28 4.2
12TRI29_MOUSE (Q8R2Q0) Tripartite motif protein 29 28 4.2
13MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-pro... 28 5.5
14GSTZ_WHEAT (O04437) Glutathione S-transferase (EC 2.5.1.18) (GST... 28 5.5
15MSI4_ARATH (O22607) WD-40 repeat protein MSI4 (Altered cold-resp... 28 7.2
16CARD8_HUMAN (Q9Y2G2) Caspase recruitment domain-containing prote... 28 7.2
17FTHS_LISMO (Q8Y624) Formate--tetrahydrofolate ligase (EC 6.3.4.3... 28 7.2
18FTHS_LISMF (Q71YD9) Formate--tetrahydrofolate ligase (EC 6.3.4.3... 28 7.2
19FTHS_LISIN (Q92AD2) Formate--tetrahydrofolate ligase (EC 6.3.4.3... 28 7.2
20GSTX1_SOLTU (P32111) Probable glutathione S-transferase (EC 2.5.... 27 9.4
21RSP5_CAEEL (Q10021) Probable splicing factor, arginine/serine-ri... 27 9.4
22GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC ... 27 9.4

>GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28|
           kDa cold-induced protein)
          Length = 236

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +1

Query: 280 LKLLGTWRGPFALRVRLALNFKGLSY 357
           LKLLG W  P+A+RVR+ LN K L Y
Sbjct: 7   LKLLGVWSSPYAIRVRVVLNLKSLPY 32



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>GSTXA_ARATH (P46421) Glutathione S-transferase 103-1A (EC 2.5.1.18)|
          Length = 224

 Score = 35.0 bits (79), Expect = 0.045
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 280 LKLLGTWRGPFALRVRLALNFKGLSY 357
           +KLLG W  PF+ RV +AL  KG+ Y
Sbjct: 7   VKLLGIWASPFSRRVEMALKLKGIPY 32



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>GSTX1_TOBAC (Q03662) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Auxin-induced protein PGNT1/PCNT110)
          Length = 223

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 280 LKLLGTWRGPFALRVRLALNFKGLSY 357
           +KLLG W  PF+ RV  AL  KG+ Y
Sbjct: 4   VKLLGFWYSPFSRRVEWALKIKGVKY 29



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>GSTX2_TOBAC (Q03663) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Auxin-induced protein PGNT35/PCNT111)
          Length = 223

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 280 LKLLGTWRGPFALRVRLALNFKGLSY 357
           +KLLG W  PF+ RV  AL  KG+ Y
Sbjct: 4   VKLLGFWYSPFSHRVEWALKIKGVKY 29



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>GSTX3_TOBAC (Q03664) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Auxin-induced protein PCNT103)
          Length = 223

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +1

Query: 280 LKLLGTWRGPFALRVRLALNFKGLSY 357
           +KLLG W  PF  RV  AL  KG+ Y
Sbjct: 4   VKLLGFWYSPFTHRVEWALKLKGVKY 29



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>GSTZ2_ARATH (Q9ZVQ4) Probable glutathione S-transferase zeta-class 2 (EC|
           2.5.1.18)
          Length = 223

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +1

Query: 280 LKLLGTWRGPFALRVRLALNFKGLSY 357
           LKL   WR   A RVR+AL  KGL Y
Sbjct: 12  LKLYSYWRSSCAHRVRIALTLKGLDY 37



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>GSTZ1_ARATH (Q9ZVQ3) Glutathione S-transferase zeta-class 1 (EC 2.5.1.18)|
           (AtGSTZ1) (Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
          Length = 221

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +1

Query: 280 LKLLGTWRGPFALRVRLALNFKGLSY 357
           LKL   WR   A RVR+AL  KGL Y
Sbjct: 9   LKLYSYWRSSCAHRVRIALALKGLDY 34



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>GSTZ_EUPES (P57108) Glutathione S-transferase zeta class (EC 2.5.1.18)|
          Length = 225

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 280 LKLLGTWRGPFALRVRLALNFKGLSY 357
           LKL   +R   + RVR+ALN KGL Y
Sbjct: 12  LKLYSYFRSSCSFRVRIALNLKGLDY 37



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>MAAI_VIBCH (Q9KSB2) Probable maleylacetoacetate isomerase (EC 5.2.1.2) (MAAI)|
          Length = 215

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +1

Query: 280 LKLLGTWRGPFALRVRLALNFKGLSY 357
           L L G WR   A RVR+ALN K L Y
Sbjct: 4   LILYGYWRSSAAYRVRIALNIKQLVY 29



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>GSTX6_SOYBN (P32110) Probable glutathione S-transferase (EC 2.5.1.18) (Heat|
           shock protein 26A) (G2-4)
          Length = 225

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 280 LKLLGTWRGPFALRVRLALNFKGLSY 357
           +KLLG    PF  RV++AL  KG+ Y
Sbjct: 8   VKLLGIVGSPFVCRVQIALKLKGVEY 33



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>YMI3_YEAST (Q04526) Hypothetical 47.3 kDa protein in TUB1-CPR3 intergenic|
           region
          Length = 418

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 121 PPVIIA-GRCSSARFVFSSPSANTKLIVPSSSTNNP 225
           PP+I+A  +  S  F +SSP      I+PS STN P
Sbjct: 29  PPIILALDQQHSLTFGYSSPRCLPTPILPSMSTNTP 64



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>TRI29_MOUSE (Q8R2Q0) Tripartite motif protein 29|
          Length = 587

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +1

Query: 109 ARSRPPVIIAGRCSSARFVFSSPSANTKLIV-PSSSTNNPYPATD 240
           A  +PPV  A +    + +FS P   T  IV P     N YP  D
Sbjct: 113 ASKKPPVTFAEKGELRKSIFSEPRKPTVTIVEPGEVRRNSYPRAD 157



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>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3 (EC|
            2.7.11.1)
          Length = 1309

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 20/62 (32%), Positives = 26/62 (41%)
 Frame = +1

Query: 46   HTRAMALHGLVLPNSLVVLTAARSRPPVIIAGRCSSARFVFSSPSANTKLIVPSSSTNNP 225
            HTR  +LHGL          AA+  PP    GR  S   +  SP A   +  P   + +P
Sbjct: 1155 HTRPSSLHGL----------AAKLGPPRPKTGRRKSTSSIPPSPLACPPISAPPPRSPSP 1204

Query: 226  YP 231
             P
Sbjct: 1205 LP 1206



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>GSTZ_WHEAT (O04437) Glutathione S-transferase (EC 2.5.1.18) (GST class-zeta)|
          Length = 213

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 286 LLGTWRGPFALRVRLALNFKGLSY 357
           L G W    + RVR+ALN KG+ Y
Sbjct: 8   LYGAWISSCSHRVRIALNLKGVDY 31



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>MSI4_ARATH (O22607) WD-40 repeat protein MSI4 (Altered cold-responsive gene 1|
           protein)
          Length = 507

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 82  PNSLVVLTAARSRPPVIIAGRCSSARFVFS 171
           PN   VL AA SRP +I+ G   +A F  +
Sbjct: 198 PNRHAVLGAANSRPDLILTGHQDNAEFALA 227



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>CARD8_HUMAN (Q9Y2G2) Caspase recruitment domain-containing protein 8 (Apoptotic|
           protein NDPP1) (DACAR) (CARD-inhibitor of
           NF-kappaB-activating ligand) (CARDINAL)
           (Tumor-up-regulated CARD-containing antagonist of CASP9)
           (TUCAN)
          Length = 431

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 230 GYGLLVEDEGTMSLVFADGEENTKRALEHRPAIITGG 120
           G G LV DE T+++ F    ++    L+H    + GG
Sbjct: 91  GLGFLVRDEVTVTIAFGSWSQHLALDLQHHEQWLVGG 127



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>FTHS_LISMO (Q8Y624) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 560

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 206 EGTMSLVFADG-EENTKRALEHRPAIITGG 120
           EG ++L+  D  + N  + LEH PAI+ GG
Sbjct: 245 EGALTLLLKDALKPNLVQTLEHTPAIVHGG 274



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>FTHS_LISMF (Q71YD9) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 560

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 206 EGTMSLVFADG-EENTKRALEHRPAIITGG 120
           EG ++L+  D  + N  + LEH PAI+ GG
Sbjct: 245 EGALTLLLKDALKPNLVQTLEHTPAIVHGG 274



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>FTHS_LISIN (Q92AD2) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 560

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 206 EGTMSLVFADG-EENTKRALEHRPAIITGG 120
           EG ++L+  D  + N  + LEH PAI+ GG
Sbjct: 245 EGALTLLLKDALKPNLVQTLEHTPAIVHGG 274



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>GSTX1_SOLTU (P32111) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Pathogenesis-related protein 1)
          Length = 217

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 280 LKLLGTWRGPFALRVRLALNFKGLSY 357
           +KLLG    PF+ RV  AL  KG+ Y
Sbjct: 4   VKLLGLRYSPFSHRVEWALKIKGVKY 29



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>RSP5_CAEEL (Q10021) Probable splicing factor, arginine/serine-rich 5|
           (RNA-binding protein srp-3) (CeSC35-2)
          Length = 208

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +1

Query: 103 TAARSRPPVIIAGRCSSARFVFSSPSANTKLIVPSSSTNNPYPATDR 243
           +++RSR PV  + R S +R    SPS    L   +S + +P PA DR
Sbjct: 121 SSSRSRSPVRESRRRSESR----SPSPKRDLKREASRSRSPLPAKDR 163



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>GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC 2.5.1.18)|
           (Protein bronze-2)
          Length = 236

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +1

Query: 280 LKLLGTWRGPFALRVRLALNFKGLSY 357
           +++LG    PF  R RLAL+ +G++Y
Sbjct: 1   MRVLGGEVSPFTARARLALDLRGVAY 26


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,217,170
Number of Sequences: 219361
Number of extensions: 724959
Number of successful extensions: 2056
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2055
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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