>ZN511_HUMAN (Q8NB15) Zinc finger protein 511|
          Length = 262

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 47/135 (34%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
 Frame = +3

Query: 162 PNPAEAMEVSAPPE-GEAPKDAGPWLGFWEVSRR-RLTPDDPFFAAGDMERELLAKHVAL 335
           P  AE + V   P  G AP        F  V+R  R   +  FF  GD++R L  + V +
Sbjct: 15  PGAAEPLPVERDPAAGAAP--------FRFVARPVRFPREHQFFEDGDVQRHLYLQDVIM 66

Query: 336 DLSDDDRYQLEKMDVASVSTVCCPIAGCGAHLDCLEDFEDHYSTRHTASCSVCSRVYPTS 515
            ++D         +   V    C +AGC    D L+D+E HY T H   CS C R +P+ 
Sbjct: 67  QVADVP-------EKPRVPAFACQVAGCCQVFDALDDYEHHYHTLHGNVCSFCKRAFPSG 119

Query: 516 RLLSIHISEAHDSFF 560
            LL  HI E HDS F
Sbjct: 120 HLLDAHILEWHDSLF 134

>L2K1_DROME (Q9V574) Protein lethal(2)k10201 (Wunen region protein B)|
          Length = 221

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 453 DHYSTRHTASCSVCSRVYPTSRLLSIHISEAHDSFF 560
           D+     + SC  C ++ PT+ LL +HI+E HD +F
Sbjct: 66  DNIDKEQSYSCVECRKMLPTAHLLDLHITEQHDCYF 101

>YQ23_CAEEL (Q09452) Putative zinc finger protein C09F5.3|
          Length = 359

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
 Frame = +3

Query: 402 CPIAGCGAHLDCLEDFEDHYSTRHTAS------CSVCSRVYPTSRLLSIHISEAHDSF 557
           CPI   G      +   +H +T+H         CS+C   +P+ +  S+H +EAH  +
Sbjct: 152 CPICPVGTPFRDKKSQLEHLTTQHLQIQVTQHICSICDSAFPSPQAQSVHFAEAHKKY 209

>ZXDB_HUMAN (P98169) Zinc finger X-linked protein ZXDB|
          Length = 803

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = +3

Query: 402 CPIAGCGAHLDCLEDFEDH---YSTRHTASCSVCSRVYPTSRLLSIH 533
           CP  GCG     + + + H   +   ++  C VC   +PT   LS H
Sbjct: 336 CPAEGCGKSFTTVYNLKAHMKGHEQENSFKCEVCEESFPTQAKLSAH 382

>TF3A_SCHPO (Q9UTL5) Transcription factor IIIA (Factor A) (TFIIIA)|
          Length = 374

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +3

Query: 402 CPIAGCGAH--LDCLEDFEDHYSTRHTASCSVCSRVYPTSRLLSIHI 536
           CP   C  H   +     ++H    H  SCS+C R + T+  L  H+
Sbjct: 177 CPHESCVGHEGFEKWSQLQNHIREAHVPSCSICGRQFKTAAHLRHHV 223

>TF3A_YEAST (P39933) Transcription factor IIIA (TFIIIA)|
          Length = 429

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
 Frame = +3

Query: 354 RYQLEKMDVASVSTVCCPIAGCGAHLDCLEDFEDHYST--RHTASCSVCSRVYPTSRLLS 527
           R QL++ +V    +  CP  GC            H  +   H  +C  C++ +     L 
Sbjct: 120 RQQLKRHEVTHTKSFICPEEGCNLRFYKHPQLRAHILSVHLHKLTCPHCNKSFQRPYRLR 179

Query: 528 IHISEAHD 551
            HIS+ HD
Sbjct: 180 NHISKHHD 187

>GP135_HUMAN (Q8IZ08) Probable G-protein coupled receptor 135|
          Length = 494

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 168 PAEAMEVSAPPEGEAPKDA-GPWLGFWEVSR 257
           PA  +++  PP G AP  A GPW GF   SR
Sbjct: 158 PAAFLDLFTPPGGSAPAAAAGPWRGFCAASR 188

>ZO84_XENLA (P18753) Oocyte zinc finger protein XLCOF8.4 (Fragment)|
          Length = 780

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = +3

Query: 417 CGAHLDCLEDFEDHYSTRHTA----SCSVCSRVYPTSRLLSIH 533
           CG       DF  H  T HT     SCS C R +PTS +L+ H
Sbjct: 679 CGKCFTRSSDFNVHRRT-HTGEKPYSCSECGRCFPTSSVLTSH 720

>ZXDA_HUMAN (P98168) Zinc finger X-linked protein ZXDA|
          Length = 799

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = +3

Query: 402 CPIAGCGAHLDCLEDFEDH---YSTRHTASCSVCSRVYPTSRLLSIH 533
           CP  GCG     + + + H   +   ++  C VC   +PT   L  H
Sbjct: 332 CPAEGCGKSFTTVYNLKAHMKGHEQENSFKCEVCEESFPTQAKLGAH 378

>NIN_MOUSE (Q61043) Ninein|
          Length = 2035

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 21/77 (27%), Positives = 32/77 (41%)
 Frame = +3

Query: 300  MERELLAKHVALDLSDDDRYQLEKMDVASVSTVCCPIAGCGAHLDCLEDFEDHYSTRHTA 479
            M++    KH   DL D +   L     +SV    C      A LDC  + E+   TR T 
Sbjct: 1122 MKQGPATKHFLSDLGDHEARDLASTGTSSVQRQECKTEASEASLDCFSELENSEDTR-TE 1180

Query: 480  SCSVCSRVYPTSRLLSI 530
            S  + S++      L++
Sbjct: 1181 SWDLKSQISQLREQLTV 1197

>ZN692_MOUSE (Q3U381) Zinc finger protein 692|
          Length = 531

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +3

Query: 399 CCPIAGCGAHLDCLEDFEDH---YSTRHTASCSVCSRVYPTSRLLSIH 533
           CCP   CG   +  +  ++H   +S      C  C+R + TS  L IH
Sbjct: 359 CCPEPACGKSFNFKKHLKEHVKLHSDTRDYICEFCARSFRTSSNLVIH 406

>P43_XENBO (P25066) P43 5S RNA-binding protein (42S P43) (Thesaurin-B)|
          Length = 365

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
 Frame = +3

Query: 402 CPIAGCGAHLDCLEDFEDHYSTRH----TASCSV--CSRVYPTSRLLSIHISE 542
           CP AGC       +    H   +H       CSV  C R +   R L IH+SE
Sbjct: 77  CPTAGCKMTFSTKKSLSRHKLYKHGDAVPLKCSVPGCKRSFRKKRALRIHVSE 129

>KRUH_DROME (P08155) Krueppel homologous protein 1|
          Length = 845

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
 Frame = +3

Query: 402 CPIAGCGAHLDCLEDFEDHYSTRHTAS----CSVCSRVYPTSRLLSIH 533
           CP  GCG    C +  + H S  HT      C +C R +  + +L +H
Sbjct: 385 CPEPGCGKGFTCSKQLKVH-SRTHTGEKPYHCDICFRDFGYNHVLKLH 431

>CD59B_MOUSE (P58019) CD59B glycoprotein precursor (Membrane attack complex|
           inhibition factor) (MACIF) (MAC-inhibitory protein)
           (MAC-IP) (Protectin)
          Length = 129

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 339 LSD-DDRYQLEKMDVASVSTVCCPIAGCGAHLDCLED 446
           LSD +  Y + ++DVA + + CC    C  +LD LE+
Sbjct: 65  LSDCNSNYIMSRLDVAGIQSKCCQWGLCNKNLDGLEE 101

>LIN13_CAEEL (Q11107) Zinc finger protein lin-13 (Abnormal cell lineage protein|
            13)
          Length = 2248

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 16/86 (18%)
 Frame = +3

Query: 351  DRYQLEKMDVASVSTVCCPIAGC--------GAHLDCLEDFEDHYSTRHTASCSVCSRVY 506
            D+     +D       CCPI G           H DCL+     +   + +SC  C + +
Sbjct: 2050 DQEHASFLDSNGTDASCCPICGSLSMWSLPKDPHTDCLQSHIIRHGLDYRSSCRQCLKQF 2109

Query: 507  PT--------SRLLSIHISEAHDSFF 560
            P         + +L  H    H + F
Sbjct: 2110 PADVNQDQVIAHILDTHGMSMHGNTF 2135



 Score = 29.6 bits (65), Expect = 6.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 432 DCLEDFEDHYSTRHTASCSVCSRVYPTSRLLSIH 533
           + +E +  H+   H   C +C RVYP+   L+ H
Sbjct: 344 ETIEHYLGHHDVVHLFGCDICYRVYPSRYELTKH 377

>SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100|
          Length = 1038

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
 Frame = +3

Query: 168 PAEAMEVSAPPEGEAPKDAGPWLGFWEVSRRRLTPD-----DPFFAAG 296
           PA +   SAPP G  P+  GP  G   V  R  TP       PF A+G
Sbjct: 15  PASSPFASAPPPGIPPQSGGPPTGSEAVGFRPFTPSASQPTRPFTASG 62

>SRYD_DROME (P07664) Serendipity locus protein delta|
          Length = 433

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
 Frame = +3

Query: 297 DMERELLAKHVALDLSDDDRYQLEKMDVASVSTVCCPIAGCGAHLDCLEDFEDHYSTRHT 476
           +++RE + +    D  DDD +  E +DV     +    +          D ED  + +  
Sbjct: 143 EIKREFVDEEEEEDDDDDDEFICEDVDVGDSEALYGKSS----------DGEDRPTKKRV 192

Query: 477 AS-CSVCSRVYPTSRLLSIHISEAH 548
              C+ C +VY +   L  HISE H
Sbjct: 193 KQECTTCGKVYNSWYQLQKHISEEH 217

>ERF4_ARATH (O80340) Ethylene-responsive transcription factor 4|
           (Ethylene-responsive element-binding factor 4) (Related
           to APETALA-2 protein 5) (EREBP-4) (AtERF4)
          Length = 222

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 32  PTILPSSNQRFPTSLARCPSERRTTEARLP 121
           PT L  S+Q+ PT  AR PS+  T +   P
Sbjct: 81  PTFLELSDQKVPTGFARSPSQSSTLDCASP 110

>NCAP_VSVSJ (P03521) Nucleocapsid protein (Nucleoprotein)|
          Length = 422

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 180 MEVSAPPEGEAPKDAGPWLGFWEVSRRRLTPD 275
           +  +APP+G   +D   WLG++E   R+ TPD
Sbjct: 364 LTTNAPPQG---RDVVEWLGWFEDQNRKPTPD 392

>NCAP_VSVIG (P11212) Nucleocapsid protein (Nucleoprotein)|
          Length = 422

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 180 MEVSAPPEGEAPKDAGPWLGFWEVSRRRLTPD 275
           +  +APP+G   +D   WLG++E   R+ TPD
Sbjct: 364 LTTNAPPQG---RDVVEWLGWFEDQNRKPTPD 392

>PSAE_SPIOL (P12354) Photosystem I reaction center subunit IV, chloroplast|
           precursor (PSI-E)
          Length = 125

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
 Frame = +3

Query: 171 AEAMEVSAPPEGEAPKDAG--PWLGFWEVSRRRLTPDDPFFAAGDMERELLAKHVALDLS 344
           A A   +A PEGEAPK A   P +G    S+ R+   + ++  G      +   VA+D  
Sbjct: 39  AAAAPAAASPEGEAPKAAAKPPPIGPKRGSKVRIMRKESYWYKG------VGSVVAVDQD 92

Query: 345 DDDRY----QLEKMDVASVST 395
              RY    +  K++ A+VST
Sbjct: 93  PKTRYPVVVRFNKVNYANVST 113

>PRDM5_MOUSE (Q9CXE0) PR domain zinc finger protein 5 (PR domain-containing|
           protein 5)
          Length = 599

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +3

Query: 411 AGCGAHLDCLEDFEDHYSTRHTASCSVCSRVYPTSRLLSIHISEAH 548
           AG   HL C EDF          +C  C   +P+  +L+ H+   H
Sbjct: 155 AGSKGHLGCEEDF----------ACPQCESSFPSEEVLTEHLQSLH 190

>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)|
          Length = 681

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
 Frame = +3

Query: 339 LSDDDRYQLEKMDVASVSTVCCP------IAGCGAHLDCLEDFEDHYSTRHTASCSVCSR 500
           L  +D  QLE +   +  +VC        I  CG H+ C +  ++  + R    C  C+R
Sbjct: 612 LLQEDEQQLEALRSIAKCSVCSKNWKDTAITVCG-HVFCSKCTQERLAAR-LRRCPSCNR 669

Query: 501 VYPTSRLLSIHI 536
            +  + LLSIH+
Sbjct: 670 GFSANDLLSIHL 681

>BAB1_DROME (Q9W0K7) Protein bric-a-brac 1|
          Length = 977

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/52 (32%), Positives = 21/52 (40%)
 Frame = -1

Query: 489 QSKKQYAECCSGLQSPPNNLDGHHNQQ*DNTPC*RSPHPSSQVGTCHHPRDP 334
           QS +Q      G    P  L  HH+          +PHPS   G+ HHP  P
Sbjct: 382 QSPQQQQAQQQGQLPLPLPLHPHHHAS-------PAPHPSQTAGSAHHPASP 426

>ZO22_XENLA (P18745) Oocyte zinc finger protein XLCOF22|
          Length = 435

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +3

Query: 399 CCPIAGCGAHLDCLEDFEDHYSTRHTASCSVCSRVYPTSRLLSIHISEAH 548
           C     C ++  CL   +  ++  +  SCS C + + TS  L+ H  + H
Sbjct: 353 CSECGKCFSNQSCLRVHQRTHTGENLFSCSECGKSFVTSSKLASHQRQTH 402

>HBL1_CAEEL (Q9XYD3) Hunchback-like protein|
          Length = 982

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 16/49 (32%), Positives = 20/49 (40%)
 Frame = +3

Query: 402 CPIAGCGAHLDCLEDFEDHYSTRHTASCSVCSRVYPTSRLLSIHISEAH 548
           CPI  CG        F  H +T     CS+C     T   L  H+ E+H
Sbjct: 338 CPI--CGFMCPSKFHFNSHMNTHGDHQCSMCDYTSRTEGRLKKHMRESH 384

>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)|
          Length = 691

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
 Frame = +3

Query: 339 LSDDDRYQLEKMDVASVSTVCCP------IAGCGAHLDCLEDFEDHYSTRHTASCSVCSR 500
           L +D+R QLE +   +  +VC        I  CG H+ CL   ++  + R    C  C++
Sbjct: 623 LQEDER-QLEALRSIAKCSVCSKNWKDTAITVCG-HVFCLGCTQERLAAR-LRRCPTCNK 679

Query: 501 VYPTSRLLSIHI 536
            +  + LLSIH+
Sbjct: 680 GFSANDLLSIHL 691


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,919,324
Number of Sequences: 219361
Number of extensions: 1101447
Number of successful extensions: 3797
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3788
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)