ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal28j05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT019036.1| Zea mays clone Contig553.F mRNA sequence Length = 1202 Score = 167 bits (84), Expect = 5e-38 Identities = 225/272 (82%) Strand = Plus / Plus Query: 276 gaccccttcttcgccgccggcgacatggagcgcgagctactcgcgaagcacgttgctctg 335 |||||||||||||| ||||| ||| | ||||||||||| || || |||||| |||| ||| Sbjct: 246 gaccccttcttcgctgccggggacctcgagcgcgagctcctggccaagcaccttgccctg 305 Query: 336 gatctctcggatgatgacaggtaccaacttgagaagatggatgtggcgagcgtcagcacg 395 ||||| || || |||||| | |||| |||||||||||||| || || ||| |||| Sbjct: 306 gatctttctgaagatgaccgcaaccagcttgagaagatggaagtagccagcacgtgcaca 365 Query: 396 gtgtgttgtcctattgctggttgtggtgcccatctagattgtttggaggactttgaagac 455 |||| |||||| ||||||||||||||||| ||||||||||| ||||||| ||||| ||| Sbjct: 366 gtgttttgtccaattgctggttgtggtgctcatctagattgcctggaggagtttgaggac 425 Query: 456 cactacagcactcggcatactgcttcttgctctgtatgttcaagagtgtacccaacatca 515 ||||| |||||| ||||||||||| ||||||||||| || |||| || ||||| ||| Sbjct: 426 cactatgtcactcgacatactgcttcatgctctgtatgctcgcgagtttatccaacttca 485 Query: 516 aggctgctgagtattcatatttctgaggcgca 547 ||| ||||||| || ||| |||||||| |||| Sbjct: 486 aggttgctgagcatccatgtttctgagacgca 517
>dbj|AK060702.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G02, full insert sequence Length = 1345 Score = 163 bits (82), Expect = 8e-37 Identities = 136/154 (88%) Strand = Plus / Plus Query: 232 ggctagggttctgggaggtgtcgcggcggcggttgacccccgacgaccccttcttcgccg 291 |||||||||| ||| || | ||||||||||| || |||||||||||||||||||||||| Sbjct: 241 ggctagggttatggttggcggcgcggcggcggctggcccccgacgaccccttcttcgccg 300 Query: 292 ccggcgacatggagcgcgagctactcgcgaagcacgttgctctggatctctcggatgatg 351 |||| ||||||||||||||||| ||||| ||||| ||||||||||||||||| || |||| Sbjct: 301 ccggggacatggagcgcgagctcctcgccaagcaagttgctctggatctctccgaagatg 360 Query: 352 acaggtaccaacttgagaagatggatgtggcgag 385 | ||||||| ||||||| |||||| |||||||| Sbjct: 361 aacggtaccagcttgagaggatggaagtggcgag 394 Score = 161 bits (81), Expect = 3e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 412 ctggttgtggtgcccatctagattgtttggaggactttgaagaccactacagcactcggc 471 |||| |||||||| ||||||||||| ||||| ||||||| |||||||| |||| || | Sbjct: 421 ctggctgtggtgctcatctagattgcctggagaactttgaggaccactatcgcacccgtc 480 Query: 472 atactgcttcttgctctgtatgttcaagagtgtacccaacatcaaggctgctgagtattc 531 |||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 481 atactgcttcatgctctgtatgttggagagtgtatccaacttcaaggctgctgagtattc 540 Query: 532 atatttctgaggcgcatgattcctt 556 ||||||||||||| ||||||||||| Sbjct: 541 atatttctgaggcacatgattcctt 565
>gb|AC152996.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0010E20_PCR, complete sequence Length = 2483 Score = 161 bits (81), Expect = 3e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 412 ctggttgtggtgcccatctagattgtttggaggactttgaagaccactacagcactcggc 471 |||| |||||||| ||||||||||| ||||| ||||||| |||||||| |||| || | Sbjct: 563 ctggctgtggtgctcatctagattgcctggagaactttgaggaccactatcgcacccgtc 622 Query: 472 atactgcttcttgctctgtatgttcaagagtgtacccaacatcaaggctgctgagtattc 531 |||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 623 atactgcttcatgctctgtatgttggagagtgtatccaacttcaaggctgctgagtattc 682 Query: 532 atatttctgaggcgcatgattcctt 556 ||||||||||||| ||||||||||| Sbjct: 683 atatttctgaggcacatgattcctt 707
>gb|AC135569.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018F17, complete sequence Length = 104291 Score = 161 bits (81), Expect = 3e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 412 ctggttgtggtgcccatctagattgtttggaggactttgaagaccactacagcactcggc 471 |||| |||||||| ||||||||||| ||||| ||||||| |||||||| |||| || | Sbjct: 103690 ctggctgtggtgctcatctagattgcctggagaactttgaggaccactatcgcacccgtc 103749 Query: 472 atactgcttcttgctctgtatgttcaagagtgtacccaacatcaaggctgctgagtattc 531 |||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 103750 atactgcttcatgctctgtatgttggagagtgtatccaacttcaaggctgctgagtattc 103809 Query: 532 atatttctgaggcgcatgattcctt 556 ||||||||||||| ||||||||||| Sbjct: 103810 atatttctgaggcacatgattcctt 103834 Score = 107 bits (54), Expect = 4e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 232 ggctagggttctgggaggtgtcgcggcggcggttgacccccgacgaccccttcttcgccg 291 |||||||||| ||| || | ||||||||||| || |||||||||||||||||||||||| Sbjct: 101816 ggctagggttatggttggcggcgcggcggcggctggcccccgacgaccccttcttcgccg 101875 Query: 292 ccggcgacatggagcgcgagctactcgcgaagca 325 |||| ||||||||||||||||| ||||| ||||| Sbjct: 101876 ccggggacatggagcgcgagctcctcgccaagca 101909 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 327 gttgctctggatctctcggatgatgacaggtaccaacttgagaagatggatgtggcgag 385 ||||||||||||||||| || ||||| ||||||| ||||||| |||||| |||||||| Sbjct: 102347 gttgctctggatctctccgaagatgaacggtaccagcttgagaggatggaagtggcgag 102405
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 161 bits (81), Expect = 3e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 412 ctggttgtggtgcccatctagattgtttggaggactttgaagaccactacagcactcggc 471 |||| |||||||| ||||||||||| ||||| ||||||| |||||||| |||| || | Sbjct: 17129229 ctggctgtggtgctcatctagattgcctggagaactttgaggaccactatcgcacccgtc 17129288 Query: 472 atactgcttcttgctctgtatgttcaagagtgtacccaacatcaaggctgctgagtattc 531 |||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 17129289 atactgcttcatgctctgtatgttggagagtgtatccaacttcaaggctgctgagtattc 17129348 Query: 532 atatttctgaggcgcatgattcctt 556 ||||||||||||| ||||||||||| Sbjct: 17129349 atatttctgaggcacatgattcctt 17129373 Score = 107 bits (54), Expect = 4e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 232 ggctagggttctgggaggtgtcgcggcggcggttgacccccgacgaccccttcttcgccg 291 |||||||||| ||| || | ||||||||||| || |||||||||||||||||||||||| Sbjct: 17127355 ggctagggttatggttggcggcgcggcggcggctggcccccgacgaccccttcttcgccg 17127414 Query: 292 ccggcgacatggagcgcgagctactcgcgaagca 325 |||| ||||||||||||||||| ||||| ||||| Sbjct: 17127415 ccggggacatggagcgcgagctcctcgccaagca 17127448 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 327 gttgctctggatctctcggatgatgacaggtaccaacttgagaagatggatgtggcgag 385 ||||||||||||||||| || ||||| ||||||| ||||||| |||||| |||||||| Sbjct: 17127886 gttgctctggatctctccgaagatgaacggtaccagcttgagaggatggaagtggcgag 17127944
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 161 bits (81), Expect = 3e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 412 ctggttgtggtgcccatctagattgtttggaggactttgaagaccactacagcactcggc 471 |||| |||||||| ||||||||||| ||||| ||||||| |||||||| |||| || | Sbjct: 17224415 ctggctgtggtgctcatctagattgcctggagaactttgaggaccactatcgcacccgtc 17224474 Query: 472 atactgcttcttgctctgtatgttcaagagtgtacccaacatcaaggctgctgagtattc 531 |||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 17224475 atactgcttcatgctctgtatgttggagagtgtatccaacttcaaggctgctgagtattc 17224534 Query: 532 atatttctgaggcgcatgattcctt 556 ||||||||||||| ||||||||||| Sbjct: 17224535 atatttctgaggcacatgattcctt 17224559 Score = 107 bits (54), Expect = 4e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 232 ggctagggttctgggaggtgtcgcggcggcggttgacccccgacgaccccttcttcgccg 291 |||||||||| ||| || | ||||||||||| || |||||||||||||||||||||||| Sbjct: 17222541 ggctagggttatggttggcggcgcggcggcggctggcccccgacgaccccttcttcgccg 17222600 Query: 292 ccggcgacatggagcgcgagctactcgcgaagca 325 |||| ||||||||||||||||| ||||| ||||| Sbjct: 17222601 ccggggacatggagcgcgagctcctcgccaagca 17222634 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 327 gttgctctggatctctcggatgatgacaggtaccaacttgagaagatggatgtggcgag 385 ||||||||||||||||| || ||||| ||||||| ||||||| |||||| |||||||| Sbjct: 17223072 gttgctctggatctctccgaagatgaacggtaccagcttgagaggatggaagtggcgag 17223130
>ref|NM_184603.1| Oryza sativa (japonica cultivar-group), mRNA Length = 537 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 287 cgccgccggcgacatggagcgcg 309 ||||||||||||||||||||||| Sbjct: 390 cgccgccggcgacatggagcgcg 412
>gb|AC084295.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015K03, complete sequence Length = 89172 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 cgccgccggcgacatggagcgcg 309 ||||||||||||||||||||||| Sbjct: 60208 cgccgccggcgacatggagcgcg 60186
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 cgccgccggcgacatggagcgcg 309 ||||||||||||||||||||||| Sbjct: 16065990 cgccgccggcgacatggagcgcg 16065968
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 cgccgccggcgacatggagcgcg 309 ||||||||||||||||||||||| Sbjct: 16060523 cgccgccggcgacatggagcgcg 16060501
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 gacgaccccttcttcgccgccg 294 |||||||||||||||||||||| Sbjct: 18482 gacgaccccttcttcgccgccg 18461 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gtcgcggcggcggttgaccc 270 |||||||||||||||||||| Sbjct: 676583 gtcgcggcggcggttgaccc 676602
>ref|XM_311118.2| Anopheles gambiae str. PEST ENSANGP00000017376 (ENSANGG00000014887), partial mRNA Length = 1635 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 244 gggaggtgtcgcggcggcggtt 265 |||||||||||||||||||||| Sbjct: 343 gggaggtgtcgcggcggcggtt 364
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 gacgaccccttcttcgccgccg 294 |||||||||||||||||||||| Sbjct: 1885597 gacgaccccttcttcgccgccg 1885618 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gtcgcggcggcggttgaccc 270 |||||||||||||||||||| Sbjct: 347222 gtcgcggcggcggttgaccc 347241
>gb|AC139939.6| Mus musculus chromosome 1, clone RP23-458O23, complete sequence Length = 175033 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 473 tactgcttcttgctctgtatg 493 ||||||||||||||||||||| Sbjct: 9183 tactgcttcttgctctgtatg 9203
>gb|AC152392.6| Mus musculus chromosome 1, clone RP23-300P10, complete sequence Length = 225267 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 473 tactgcttcttgctctgtatg 493 ||||||||||||||||||||| Sbjct: 146223 tactgcttcttgctctgtatg 146243
>gb|AE005771.1| Caulobacter crescentus CB15 section 97 of 359 of the complete genome Length = 10665 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 ccgaggccatggaggtctccg 192 ||||||||||||||||||||| Sbjct: 3087 ccgaggccatggaggtctccg 3107
>gb|AC055731.22| Homo sapiens 3 BAC RP11-588D3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152537 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 490 tatgttcaagagtgtacccaa 510 ||||||||||||||||||||| Sbjct: 31177 tatgttcaagagtgtacccaa 31157
>gb|AC025155.20| Homo sapiens 3 BAC RP11-487M24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 40307 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 gagtattcatatttctgaggc 544 ||||||||||||||||||||| Sbjct: 37780 gagtattcatatttctgaggc 37760
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 gcgcagcacctgcgcgtcgc 26 |||||||||||||||||||| Sbjct: 3235617 gcgcagcacctgcgcgtcgc 3235598
>gb|AC084385.5| Mus musculus chromosome 15 clone RP23-54K18, complete sequence Length = 203712 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgtccctccgagaggaggac 102 |||||||||||||||||||| Sbjct: 119156 tgtccctccgagaggaggac 119137
>gb|AC121517.7| Mus musculus chromosome 15, clone RP23-120A12, complete sequence Length = 222681 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tgtccctccgagaggaggac 102 |||||||||||||||||||| Sbjct: 185793 tgtccctccgagaggaggac 185812
>ref|XM_818292.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.26.0090) partial mRNA Length = 3492 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 agaggaggacgacggaggcg 112 |||||||||||||||||||| Sbjct: 1353 agaggaggacgacggaggcg 1372
>emb|X70943.1|TTASPS T.thermophilus gene for aspartyl-tRNA synthetase Length = 1761 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 gtcgcggcggcggttgaccc 270 |||||||||||||||||||| Sbjct: 104 gtcgcggcggcggttgaccc 85
>gb|DQ301755.1| Thanatephorus cucumeris strain SJ07 RNA polymerase II second largest subunit (RPB2) gene, partial sequence Length = 728 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 tcaagagtgtacccaacatc 514 |||||||||||||||||||| Sbjct: 157 tcaagagtgtacccaacatc 138
>gb|DQ301750.1| Thanatephorus cucumeris strain CBS 346.84 RNA polymerase II second largest subunit (RPB2) gene, partial sequence Length = 763 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 tcaagagtgtacccaacatc 514 |||||||||||||||||||| Sbjct: 183 tcaagagtgtacccaacatc 164
>gb|DQ301746.1| Thanatephorus cucumeris strain CBS 200.25 RNA polymerase II second largest subunit (RPB2) gene, partial sequence Length = 747 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 tcaagagtgtacccaacatc 514 |||||||||||||||||||| Sbjct: 166 tcaagagtgtacccaacatc 147
>gb|DQ301745.1| Thanatephorus cucumeris strain CBS 174.83 RNA polymerase II second largest subunit (RPB2) gene, partial sequence Length = 726 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 tcaagagtgtacccaacatc 514 |||||||||||||||||||| Sbjct: 153 tcaagagtgtacccaacatc 134
>gb|DQ301741.1| Thanatephorus cucumeris strain AG-7 RNA polymerase II second largest subunit (RPB2) gene, partial sequence Length = 721 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 tcaagagtgtacccaacatc 514 |||||||||||||||||||| Sbjct: 153 tcaagagtgtacccaacatc 134
>gb|DQ301739.1| Thanatephorus cucumeris strain AG-5 RNA polymerase II second largest subunit (RPB2) gene, partial sequence Length = 761 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 tcaagagtgtacccaacatc 514 |||||||||||||||||||| Sbjct: 590 tcaagagtgtacccaacatc 609
>gb|DQ301735.1| Thanatephorus cucumeris strain AG-3 RNA polymerase II second largest subunit (RPB2) gene, partial sequence Length = 744 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 tcaagagtgtacccaacatc 514 |||||||||||||||||||| Sbjct: 165 tcaagagtgtacccaacatc 146
>gb|DQ301734.1| Thanatephorus cucumeris strain AG-22IV RNA polymerase II second largest subunit (RPB2) gene, partial sequence Length = 728 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 tcaagagtgtacccaacatc 514 |||||||||||||||||||| Sbjct: 155 tcaagagtgtacccaacatc 136
>gb|DQ301729.1| Thanatephorus cucumeris strain CBS 293.31 RNA polymerase II second largest subunit (RPB2) gene, partial sequence Length = 763 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 tcaagagtgtacccaacatc 514 |||||||||||||||||||| Sbjct: 586 tcaagagtgtacccaacatc 605
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tgtcgcggcggcggttgacc 269 |||||||||||||||||||| Sbjct: 26567 tgtcgcggcggcggttgacc 26586
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 tcttcgccgccggcgacatg 302 |||||||||||||||||||| Sbjct: 5118888 tcttcgccgccggcgacatg 5118869
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ccccttcttcgccgccggcg 297 |||||||||||||||||||| Sbjct: 3237166 ccccttcttcgccgccggcg 3237185 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ccccttcttcgccgccggcg 297 |||||||||||||||||||| Sbjct: 3230484 ccccttcttcgccgccggcg 3230503
>gb|AY795790.1| Uncultured bacterium clone Schla.nosZ.04 nitrous oxide reductase (nosZ) gene, partial cds Length = 715 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cgacgaccccttcttcgccg 291 |||||||||||||||||||| Sbjct: 369 cgacgaccccttcttcgccg 388
>gb|AY795785.1| Uncultured bacterium clone Schla.nosZ.02 nitrous oxide reductase (nosZ) gene, partial cds Length = 716 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cgacgaccccttcttcgccg 291 |||||||||||||||||||| Sbjct: 369 cgacgaccccttcttcgccg 388
>gb|AY795782.1| Uncultured bacterium clone Schla.nosZ.01 nitrous oxide reductase-like (nosZ) gene, partial sequence Length = 715 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cgacgaccccttcttcgccg 291 |||||||||||||||||||| Sbjct: 369 cgacgaccccttcttcgccg 388
>gb|AC147060.2| Homo sapiens BAC clone RP11-268B15 from 4, complete sequence Length = 174548 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 gtttggaggactttgaagac 455 |||||||||||||||||||| Sbjct: 61153 gtttggaggactttgaagac 61134
>gb|AC145621.2| Homo sapiens BAC clone RP11-365B19 from 4, complete sequence Length = 167934 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 gtttggaggactttgaagac 455 |||||||||||||||||||| Sbjct: 61153 gtttggaggactttgaagac 61134
>gb|AC118282.4| Homo sapiens BAC clone RP11-1281K21 from 4, complete sequence Length = 208765 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 gtttggaggactttgaagac 455 |||||||||||||||||||| Sbjct: 142907 gtttggaggactttgaagac 142888
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ccttcttcgccgccggcgac 299 |||||||||||||||||||| Sbjct: 1502605 ccttcttcgccgccggcgac 1502624
>gb|AY912918.1| Uncultured forest soil bacterium clone DUNnos010 nitrous oxide reductase (nosZ) gene, partial cds Length = 672 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cgacgaccccttcttcgccg 291 |||||||||||||||||||| Sbjct: 348 cgacgaccccttcttcgccg 367
>gb|AY912917.1| Uncultured forest soil bacterium clone DUNnos009 nitrous oxide reductase (nosZ) gene, partial cds Length = 672 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cgacgaccccttcttcgccg 291 |||||||||||||||||||| Sbjct: 348 cgacgaccccttcttcgccg 367
>gb|AY912916.1| Uncultured forest soil bacterium clone DUNnos008 nitrous oxide reductase (nosZ) gene, partial cds Length = 672 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cgacgaccccttcttcgccg 291 |||||||||||||||||||| Sbjct: 348 cgacgaccccttcttcgccg 367
>gb|AY912915.1| Uncultured forest soil bacterium clone DUNnos007 nitrous oxide reductase (nosZ) gene, partial cds Length = 672 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cgacgaccccttcttcgccg 291 |||||||||||||||||||| Sbjct: 348 cgacgaccccttcttcgccg 367
>gb|AY912914.1| Uncultured forest soil bacterium clone DUNnos006 nitrous oxide reductase (nosZ) gene, partial cds Length = 672 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cgacgaccccttcttcgccg 291 |||||||||||||||||||| Sbjct: 348 cgacgaccccttcttcgccg 367
>gb|AF047554.1|AF047554 Myxococcus xanthus putative ABC transporter (abcA) and putative carbamoyl transferase (ctrA) genes, complete cds; and unknown genes Length = 6945 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 cttcttcgccgccggcgacatgga 304 |||||||||||||| ||||||||| Sbjct: 6450 cttcttcgccgccgtcgacatgga 6473 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,960,281 Number of Sequences: 3902068 Number of extensions: 3960281 Number of successful extensions: 69067 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68481 Number of HSP's gapped (non-prelim): 585 length of query: 561 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 538 effective length of database: 17,143,297,704 effective search space: 9223094164752 effective search space used: 9223094164752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
