ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal28d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188271.1| Oryza sativa (japonica cultivar-group), predic... 309 4e-81
2dbj|AK070748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 4e-81
3dbj|AK068509.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 4e-81
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 248 1e-62
5dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic D... 248 1e-62
6dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
7dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
8ref|NM_121203.2| Arabidopsis thaliana catalytic/ hydrolase AT5G1... 48 0.027
9emb|BX831480.1|CNS09ZGU Arabidopsis thaliana Full-length cDNA Co... 48 0.027
10emb|BX831759.1|CNS09YN1 Arabidopsis thaliana Full-length cDNA Co... 48 0.027
11emb|BX830277.1|CNS09YO7 Arabidopsis thaliana Full-length cDNA Co... 48 0.027
12gb|AY085467.1| Arabidopsis thaliana clone 15284 mRNA, complete s... 48 0.027
13gb|AC147428.6| Medicago truncatula clone mth2-34i10, complete se... 46 0.10
14emb|AL163814.1|ATT22P22 Arabidopsis thaliana DNA chromosome 5, B... 46 0.10
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
16dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
17emb|BX119979.9| Zebrafish DNA sequence from clone CH211-201G8 in... 42 1.6
18emb|BX511083.17| Zebrafish DNA sequence from clone CH211-195F22 ... 42 1.6
19gb|U60417.1|SPU60417 Streptomyces pristinaespiralis 4-dimethylam... 42 1.6
20gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.5
21gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.5
22gb|AY658256.1| Synthetic construct Peudomonas aeruginosa clone F... 40 6.5
23gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 6.5
24gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 6.5
25gb|AC144563.15| Medicago truncatula clone mth2-5c24, complete se... 40 6.5
26emb|AL645607.9| Mouse DNA sequence from clone RP23-298N21 on chr... 40 6.5
27gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.5
28dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 40 6.5
29dbj|AK044942.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 40 6.5
30emb|BX832067.1|CNS0A1XI Arabidopsis thaliana Full-length cDNA Co... 40 6.5
31gb|AE004785.1| Pseudomonas aeruginosa PAO1, section 346 of 529 o... 40 6.5
32dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 6.5
33emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 6.5
34dbj|AB010087.1| Pseudomonas aeruginosa rpsB, tsf, pyrH, frr gene... 40 6.5 
>ref|NM_188271.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1188

 Score =  309 bits (156), Expect = 4e-81
 Identities = 330/388 (85%)
 Strand = Plus / Plus

                                                                        
Query: 89   actggaagggatcatcctgacttcaccagctgtgcgtgtaaaaccagcgcatccgatagt 148
            ||||||||| |||||||| |||||||||||| ||||||||||||| || ||||| || ||
Sbjct: 708  actggaaggcatcatcctaacttcaccagctctgcgtgtaaaacctgctcatcccattgt 767

                                                                        
Query: 149  cggggcagtggcaccgatattctctctgattgcacccaagttccaattcaagggagccaa 208
             ||||| ||||| || |||||||||||| | ||||| ||||| || ||||||||||| ||
Sbjct: 768  aggggctgtggcgccaatattctctctgttagcaccaaagtttcagttcaagggagctaa 827

                                                                        
Query: 209  caagcggggcatcccggtgtcccgcgaccctgcggcgctgctagcaaagtactctgaccc 268
            |||| | ||||||||||||||||||||||| || || |||||||| |||||||| || ||
Sbjct: 828  caagagaggcatcccggtgtcccgcgacccggctgccctgctagcgaagtactccgatcc 887

                                                                        
Query: 269  gctggtctacacggggccgatcagggtccgtacgggccacgagatcctgcgcatctcctc 328
            |||||| ||||| ||||||||||| || || || ||||| || ||||| |||||||||||
Sbjct: 888  gctggtttacaccgggccgatcagagttcggaccggccatgaaatcctacgcatctcctc 947

                                                                        
Query: 329  ctacctgctgcacaacctgaagaaggtgactgtcccgtttgtggtcctgcacggcacggc 388
            |||||||||||||||| |||||||||| || ||||| ||  ||||||| || || || ||
Sbjct: 948  ctacctgctgcacaacttgaagaaggtcaccgtcccattcatggtcctccatggaaccgc 1007

                                                                        
Query: 389  ggaccgggtgacggacccgctggcctcgcaggagctctacagggaggcggcgtcgaggca 448
             ||||||||||| ||||| ||||| || ||||| |||||||  |||||  | ||||||||
Sbjct: 1008 agaccgggtgaccgaccccctggcttcacaggacctctacaacgaggcctcatcgaggca 1067

                                        
Query: 449  caaggacctgcggctgtacgaggggttc 476
            |||||| ||| |||||||||| ||||||
Sbjct: 1068 caaggatctgaggctgtacgatgggttc 1095
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>dbj|AK070748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068O10, full
            insert sequence
          Length = 2538

 Score =  309 bits (156), Expect = 4e-81
 Identities = 330/388 (85%)
 Strand = Plus / Plus

                                                                        
Query: 89   actggaagggatcatcctgacttcaccagctgtgcgtgtaaaaccagcgcatccgatagt 148
            ||||||||| |||||||| |||||||||||| ||||||||||||| || ||||| || ||
Sbjct: 1828 actggaaggcatcatcctaacttcaccagctctgcgtgtaaaacctgctcatcccattgt 1887

                                                                        
Query: 149  cggggcagtggcaccgatattctctctgattgcacccaagttccaattcaagggagccaa 208
             ||||| ||||| || |||||||||||| | ||||| ||||| || ||||||||||| ||
Sbjct: 1888 aggggctgtggcgccaatattctctctgttagcaccaaagtttcagttcaagggagctaa 1947

                                                                        
Query: 209  caagcggggcatcccggtgtcccgcgaccctgcggcgctgctagcaaagtactctgaccc 268
            |||| | ||||||||||||||||||||||| || || |||||||| |||||||| || ||
Sbjct: 1948 caagagaggcatcccggtgtcccgcgacccggctgccctgctagcgaagtactccgatcc 2007

                                                                        
Query: 269  gctggtctacacggggccgatcagggtccgtacgggccacgagatcctgcgcatctcctc 328
            |||||| ||||| ||||||||||| || || || ||||| || ||||| |||||||||||
Sbjct: 2008 gctggtttacaccgggccgatcagagttcggaccggccatgaaatcctacgcatctcctc 2067

                                                                        
Query: 329  ctacctgctgcacaacctgaagaaggtgactgtcccgtttgtggtcctgcacggcacggc 388
            |||||||||||||||| |||||||||| || ||||| ||  ||||||| || || || ||
Sbjct: 2068 ctacctgctgcacaacttgaagaaggtcaccgtcccattcatggtcctccatggaaccgc 2127

                                                                        
Query: 389  ggaccgggtgacggacccgctggcctcgcaggagctctacagggaggcggcgtcgaggca 448
             ||||||||||| ||||| ||||| || ||||| |||||||  |||||  | ||||||||
Sbjct: 2128 agaccgggtgaccgaccccctggcttcacaggacctctacaacgaggcctcatcgaggca 2187

                                        
Query: 449  caaggacctgcggctgtacgaggggttc 476
            |||||| ||| |||||||||| ||||||
Sbjct: 2188 caaggatctgaggctgtacgatgggttc 2215
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>dbj|AK068509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154B19, full
            insert sequence
          Length = 1485

 Score =  309 bits (156), Expect = 4e-81
 Identities = 330/388 (85%)
 Strand = Plus / Plus

                                                                        
Query: 89   actggaagggatcatcctgacttcaccagctgtgcgtgtaaaaccagcgcatccgatagt 148
            ||||||||| |||||||| |||||||||||| ||||||||||||| || ||||| || ||
Sbjct: 771  actggaaggcatcatcctaacttcaccagctctgcgtgtaaaacctgctcatcccattgt 830

                                                                        
Query: 149  cggggcagtggcaccgatattctctctgattgcacccaagttccaattcaagggagccaa 208
             ||||| ||||| || |||||||||||| | ||||| ||||| || ||||||||||| ||
Sbjct: 831  aggggctgtggcgccaatattctctctgttagcaccaaagtttcagttcaagggagctaa 890

                                                                        
Query: 209  caagcggggcatcccggtgtcccgcgaccctgcggcgctgctagcaaagtactctgaccc 268
            |||| | ||||||||||||||||||||||| || || |||||||| |||||||| || ||
Sbjct: 891  caagagaggcatcccggtgtcccgcgacccggctgccctgctagcgaagtactccgatcc 950

                                                                        
Query: 269  gctggtctacacggggccgatcagggtccgtacgggccacgagatcctgcgcatctcctc 328
            |||||| ||||| ||||||||||| || || || ||||| || ||||| |||||||||||
Sbjct: 951  gctggtttacaccgggccgatcagagttcggaccggccatgaaatcctacgcatctcctc 1010

                                                                        
Query: 329  ctacctgctgcacaacctgaagaaggtgactgtcccgtttgtggtcctgcacggcacggc 388
            |||||||||||||||| |||||||||| || ||||| ||  ||||||| || || || ||
Sbjct: 1011 ctacctgctgcacaacttgaagaaggtcaccgtcccattcatggtcctccatggaaccgc 1070

                                                                        
Query: 389  ggaccgggtgacggacccgctggcctcgcaggagctctacagggaggcggcgtcgaggca 448
             ||||||||||| ||||| ||||| || ||||| |||||||  |||||  | ||||||||
Sbjct: 1071 agaccgggtgaccgaccccctggcttcacaggacctctacaacgaggcctcatcgaggca 1130

                                        
Query: 449  caaggacctgcggctgtacgaggggttc 476
            |||||| ||| |||||||||| ||||||
Sbjct: 1131 caaggatctgaggctgtacgatgggttc 1158
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  248 bits (125), Expect = 1e-62
 Identities = 272/321 (84%)
 Strand = Plus / Minus

                                                                           
Query: 156     gtggcaccgatattctctctgattgcacccaagttccaattcaagggagccaacaagcgg 215
               ||||| || |||||||||||| | ||||| ||||| || ||||||||||| |||||| | 
Sbjct: 5389484 gtggcgccaatattctctctgttagcaccaaagtttcagttcaagggagctaacaagaga 5389425

                                                                           
Query: 216     ggcatcccggtgtcccgcgaccctgcggcgctgctagcaaagtactctgacccgctggtc 275
               ||||||||||||||||||||||| || || |||||||| |||||||| || |||||||| 
Sbjct: 5389424 ggcatcccggtgtcccgcgacccggctgccctgctagcgaagtactccgatccgctggtt 5389365

                                                                           
Query: 276     tacacggggccgatcagggtccgtacgggccacgagatcctgcgcatctcctcctacctg 335
               ||||| ||||||||||| || || || ||||| || ||||| ||||||||||||||||||
Sbjct: 5389364 tacaccgggccgatcagagttcggaccggccatgaaatcctacgcatctcctcctacctg 5389305

                                                                           
Query: 336     ctgcacaacctgaagaaggtgactgtcccgtttgtggtcctgcacggcacggcggaccgg 395
               ||||||||| |||||||||| || ||||| ||  ||||||| || || || || ||||||
Sbjct: 5389304 ctgcacaacttgaagaaggtcaccgtcccattcatggtcctccatggaaccgcagaccgg 5389245

                                                                           
Query: 396     gtgacggacccgctggcctcgcaggagctctacagggaggcggcgtcgaggcacaaggac 455
               ||||| ||||| ||||| || ||||| |||||||  |||||  | |||||||||||||| 
Sbjct: 5389244 gtgaccgaccccctggcttcacaggacctctacaacgaggcctcatcgaggcacaaggat 5389185

                                    
Query: 456     ctgcggctgtacgaggggttc 476
               ||| |||||||||| ||||||
Sbjct: 5389184 ctgaggctgtacgatgggttc 5389164



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                     
Query: 21       aatggtgcaaagcattaacaaaatagcctggttgaaa 57
                |||||||||||||||||||||||||||||||||||||
Sbjct: 41555276 aatggtgcaaagcattaacaaaatagcctggttgaaa 41555312



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                    
Query: 21      aatggtgcaaagcattaacaaaatagcctggttgaaa 57
               |||||||||||||||||||||||||||||||||||||
Sbjct: 5390191 aatggtgcaaagcattaacaaaatagcctggttgaaa 5390155



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                     
Query: 89      actggaagggatcatcctgacttcaccagctgtgcgtgtaaaaccagcgcatcc 142
               ||||||||| |||||||| |||||||||||| ||||||||||||| || |||||
Sbjct: 5390036 actggaaggcatcatcctaacttcaccagctctgcgtgtaaaacctgctcatcc 5389983



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 75       catatcagaaccagactggaagggatcatcctgacttcaccagc 118
                ||||||||| | | ||||||||| |||||||| |||||||||||
Sbjct: 41555417 catatcagagcaaaactggaaggcatcatcctaacttcaccagc 41555460
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>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1046G12
          Length = 163533

 Score =  248 bits (125), Expect = 1e-62
 Identities = 272/321 (84%)
 Strand = Plus / Minus

                                                                          
Query: 156    gtggcaccgatattctctctgattgcacccaagttccaattcaagggagccaacaagcgg 215
              ||||| || |||||||||||| | ||||| ||||| || ||||||||||| |||||| | 
Sbjct: 140828 gtggcgccaatattctctctgttagcaccaaagtttcagttcaagggagctaacaagaga 140769

                                                                          
Query: 216    ggcatcccggtgtcccgcgaccctgcggcgctgctagcaaagtactctgacccgctggtc 275
              ||||||||||||||||||||||| || || |||||||| |||||||| || |||||||| 
Sbjct: 140768 ggcatcccggtgtcccgcgacccggctgccctgctagcgaagtactccgatccgctggtt 140709

                                                                          
Query: 276    tacacggggccgatcagggtccgtacgggccacgagatcctgcgcatctcctcctacctg 335
              ||||| ||||||||||| || || || ||||| || ||||| ||||||||||||||||||
Sbjct: 140708 tacaccgggccgatcagagttcggaccggccatgaaatcctacgcatctcctcctacctg 140649

                                                                          
Query: 336    ctgcacaacctgaagaaggtgactgtcccgtttgtggtcctgcacggcacggcggaccgg 395
              ||||||||| |||||||||| || ||||| ||  ||||||| || || || || ||||||
Sbjct: 140648 ctgcacaacttgaagaaggtcaccgtcccattcatggtcctccatggaaccgcagaccgg 140589

                                                                          
Query: 396    gtgacggacccgctggcctcgcaggagctctacagggaggcggcgtcgaggcacaaggac 455
              ||||| ||||| ||||| || ||||| |||||||  |||||  | |||||||||||||| 
Sbjct: 140588 gtgaccgaccccctggcttcacaggacctctacaacgaggcctcatcgaggcacaaggat 140529

                                   
Query: 456    ctgcggctgtacgaggggttc 476
              ||| |||||||||| ||||||
Sbjct: 140528 ctgaggctgtacgatgggttc 140508



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                   
Query: 21     aatggtgcaaagcattaacaaaatagcctggttgaaa 57
              |||||||||||||||||||||||||||||||||||||
Sbjct: 141535 aatggtgcaaagcattaacaaaatagcctggttgaaa 141499



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                    
Query: 89     actggaagggatcatcctgacttcaccagctgtgcgtgtaaaaccagcgcatcc 142
              ||||||||| |||||||| |||||||||||| ||||||||||||| || |||||
Sbjct: 141380 actggaaggcatcatcctaacttcaccagctctgcgtgtaaaacctgctcatcc 141327
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>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0614D08
          Length = 147548

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                   
Query: 21     aatggtgcaaagcattaacaaaatagcctggttgaaa 57
              |||||||||||||||||||||||||||||||||||||
Sbjct: 111569 aatggtgcaaagcattaacaaaatagcctggttgaaa 111605



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 75     catatcagaaccagactggaagggatcatcctgacttcaccagc 118
              ||||||||| | | ||||||||| |||||||| |||||||||||
Sbjct: 111710 catatcagagcaaaactggaaggcatcatcctaacttcaccagc 111753
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>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0660F12
          Length = 147203

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                   
Query: 21     aatggtgcaaagcattaacaaaatagcctggttgaaa 57
              |||||||||||||||||||||||||||||||||||||
Sbjct: 123475 aatggtgcaaagcattaacaaaatagcctggttgaaa 123511



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 75     catatcagaaccagactggaagggatcatcctgacttcaccagc 118
              ||||||||| | | ||||||||| |||||||| |||||||||||
Sbjct: 123616 catatcagagcaaaactggaaggcatcatcctaacttcaccagc 123659
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>ref|NM_121203.2| Arabidopsis thaliana catalytic/ hydrolase AT5G11650 mRNA, complete
           cds
          Length = 1571

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 138/176 (78%)
 Strand = Plus / Plus

                                                                       
Query: 123 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 182
           ||||| ||||| || ||||| || ||||||||| | || || || |||||  || | |||
Sbjct: 798 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 857

                                                                       
Query: 183 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 242
           || | |||||||||||| ||||| |||||| | ||||| ||||| ||  | |||||||  
Sbjct: 858 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 917

                                                                   
Query: 243 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 298
           || ||  |||| ||||||||||| ||| | |||||||| || ||||| || |||||
Sbjct: 918 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 973
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>emb|BX831480.1|CNS09ZGU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS9ZB05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1363

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 138/176 (78%)
 Strand = Plus / Plus

                                                                       
Query: 123 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 182
           ||||| ||||| || ||||| || ||||||||| | || || || |||||  || | |||
Sbjct: 789 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 848

                                                                       
Query: 183 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 242
           || | |||||||||||| ||||| |||||| | ||||| ||||| ||  | |||||||  
Sbjct: 849 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 908

                                                                   
Query: 243 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 298
           || ||  |||| ||||||||||| ||| | |||||||| || ||||| || |||||
Sbjct: 909 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 964
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>emb|BX831759.1|CNS09YN1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH28ZC11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1317

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 138/176 (78%)
 Strand = Plus / Plus

                                                                       
Query: 123 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 182
           ||||| ||||| || ||||| || ||||||||| | || || || |||||  || | |||
Sbjct: 779 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 838

                                                                       
Query: 183 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 242
           || | |||||||||||| ||||| |||||| | ||||| ||||| ||  | |||||||  
Sbjct: 839 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 898

                                                                   
Query: 243 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 298
           || ||  |||| ||||||||||| ||| | |||||||| || ||||| || |||||
Sbjct: 899 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 954
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>emb|BX830277.1|CNS09YO7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB6ZH11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1296

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 138/176 (78%)
 Strand = Plus / Plus

                                                                       
Query: 123 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 182
           ||||| ||||| || ||||| || ||||||||| | || || || |||||  || | |||
Sbjct: 734 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 793

                                                                       
Query: 183 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 242
           || | |||||||||||| ||||| |||||| | ||||| ||||| ||  | |||||||  
Sbjct: 794 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 853

                                                                   
Query: 243 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 298
           || ||  |||| ||||||||||| ||| | |||||||| || ||||| || |||||
Sbjct: 854 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 909
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>gb|AY085467.1| Arabidopsis thaliana clone 15284 mRNA, complete sequence
          Length = 1406

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 138/176 (78%)
 Strand = Plus / Plus

                                                                       
Query: 123 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 182
           ||||| ||||| || ||||| || ||||||||| | || || || |||||  || | |||
Sbjct: 798 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 857

                                                                       
Query: 183 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 242
           || | |||||||||||| ||||| |||||| | ||||| ||||| ||  | |||||||  
Sbjct: 858 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 917

                                                                   
Query: 243 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 298
           || ||  |||| ||||||||||| ||| | |||||||| || ||||| || |||||
Sbjct: 918 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 973
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>gb|AC147428.6| Medicago truncatula clone mth2-34i10, complete sequence
          Length = 112873

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 252   gcaaagtactctgacccgctggtctacacggggcc 286
             |||||||||||||| || ||||||||||| |||||
Sbjct: 82206 gcaaagtactctgatcctctggtctacacagggcc 82240
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>emb|AL163814.1|ATT22P22 Arabidopsis thaliana DNA chromosome 5, BAC clone T22P22 (ESSA project)
          Length = 93205

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                         
Query: 188   gttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcggcgct 247
             |||||||||||| ||||| |||||| | ||||| ||||| ||  | |||||||  || ||
Sbjct: 25399 gttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaagctct 25458

                                                                
Query: 248   gctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 298
               |||| ||||||||||| ||| | |||||||| || ||||| || |||||
Sbjct: 25459 cttagccaagtactctgatccgttagtctacactggtccgattagagtccg 25509
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 89       actggaagggatcatcctgacttcaccagc 118
                ||||||||| |||||||| |||||||||||
Sbjct: 22269025 actggaaggcatcatcctaacttcaccagc 22269054
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>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1267B06
          Length = 156989

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 89    actggaagggatcatcctgacttcaccagc 118
             ||||||||| |||||||| |||||||||||
Sbjct: 27669 actggaaggcatcatcctaacttcaccagc 27698
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>emb|BX119979.9| Zebrafish DNA sequence from clone CH211-201G8 in linkage group 1,
             complete sequence
          Length = 194023

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 106   tgacttcaccagctgtgcgtgtaaa 130
             ||||||| |||||||||||||||||
Sbjct: 54625 tgacttctccagctgtgcgtgtaaa 54601
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>emb|BX511083.17| Zebrafish DNA sequence from clone CH211-195F22 in linkage group 1,
             complete sequence
          Length = 211668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 106   tgacttcaccagctgtgcgtgtaaa 130
             ||||||| |||||||||||||||||
Sbjct: 69397 tgacttctccagctgtgcgtgtaaa 69373
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>gb|U60417.1|SPU60417 Streptomyces pristinaespiralis 4-dimethylamino-L-phenylalanine
            precursor biosynthesis (papA, papC, papB, papM) genes,
            complete cds
          Length = 4740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 387  gcggaccgggtgacggacccg 407
            |||||||||||||||||||||
Sbjct: 2327 gcggaccgggtgacggacccg 2347
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 203     agccaacaagcggggcatcccggt 226
               ||||||||||| ||||||||||||
Sbjct: 2106197 agccaacaagctgggcatcccggt 2106174
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 203     agccaacaagcggggcatcccggt 226
               ||||||||||| ||||||||||||
Sbjct: 1275583 agccaacaagctgggcatcccggt 1275606
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>gb|AY658256.1| Synthetic construct Peudomonas aeruginosa clone FLH052696.01F
           PA3656 gene, partial cds
          Length = 741

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 203 agccaacaagcggggcatcccggt 226
           ||||||||||| ||||||||||||
Sbjct: 525 agccaacaagctgggcatcccggt 548
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 203     agccaacaagcggggcatcccggt 226
               ||||||||||| ||||||||||||
Sbjct: 1694081 agccaacaagctgggcatcccggt 1694104
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 203     agccaacaagcggggcatcccggt 226
               ||||||||||| ||||||||||||
Sbjct: 1523741 agccaacaagctgggcatcccggt 1523764
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>gb|AC144563.15| Medicago truncatula clone mth2-5c24, complete sequence
          Length = 111376

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 91    tggaagggatcatcctgacttcac 114
             |||||||||| |||||||||||||
Sbjct: 94564 tggaagggatgatcctgacttcac 94541
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>emb|AL645607.9| Mouse DNA sequence from clone RP23-298N21 on chromosome 11, complete
             sequence
          Length = 124112

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 88    gactggaagggatcatcctgactt 111
             ||||||| ||||||||||||||||
Sbjct: 83926 gactggatgggatcatcctgactt 83949
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 203     agccaacaagcggggcatcccggt 226
               ||||||||||| ||||||||||||
Sbjct: 1348428 agccaacaagctgggcatcccggt 1348451
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>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 366     tttgtggtcctgcacggcac 385
               ||||||||||||||||||||
Sbjct: 1175660 tttgtggtcctgcacggcac 1175641
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>dbj|AK044942.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
            enriched library, clone:B130014M11
            product:unclassifiable, full insert sequence
          Length = 1930

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 88   gactggaagggatcatcctgactt 111
            ||||||| ||||||||||||||||
Sbjct: 1324 gactggatgggatcatcctgactt 1347
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>emb|BX832067.1|CNS0A1XI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH49ZF02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1272

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 83/104 (79%)
 Strand = Plus / Plus

                                                                       
Query: 123 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 182
           ||||| ||||| || ||||| || ||||||||| | || || || |||||  || | |||
Sbjct: 780 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 839

                                                       
Query: 183 cccaagttccaattcaagggagccaacaagcggggcatcccggt 226
           || | |||||||||||| ||||| |||||| | ||||| |||||
Sbjct: 840 ccaaggttccaattcaaaggagcaaacaagagaggcattccggt 883
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>gb|AE004785.1| Pseudomonas aeruginosa PAO1, section 346 of 529 of the complete
            genome
          Length = 14537

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 203  agccaacaagcggggcatcccggt 226
            ||||||||||| ||||||||||||
Sbjct: 6923 agccaacaagctgggcatcccggt 6900
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 204     gccaacaagcggggcatccc 223
               ||||||||||||||||||||
Sbjct: 2974843 gccaacaagcggggcatccc 2974824
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 203     agccaacaagcggggcatcccggt 226
               ||||||||||| ||||||||||||
Sbjct: 4502966 agccaacaagctgggcatcccggt 4502943
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>dbj|AB010087.1| Pseudomonas aeruginosa rpsB, tsf, pyrH, frr genes for ribosomal
           protein S2, elongation factor Ts, UMP kinase, ribosome
           recycling factor, complete cds
          Length = 4003

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 203 agccaacaagcggggcatcccggt 226
           ||||||||||| ||||||||||||
Sbjct: 787 agccaacaagctgggcatcccggt 810


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,898,752
Number of Sequences: 3902068
Number of extensions: 2898752
Number of successful extensions: 47673
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 47307
Number of HSP's gapped (non-prelim): 367
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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