Clone Information

BLAST Search Result

Clone Name	baal27n12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TSN2_MOUSE (Q922J6) Tetraspanin-2 (Tspan-2)	39	0.013
2	CD82_RAT (O70352) CD82 antigen (Metastasis suppressor homolog)	38	0.023
3	CD82_MOUSE (P40237) CD82 antigen (Inducible membrane protein R2)...	38	0.023
4	CD82_HUMAN (P27701) CD82 antigen (Inducible membrane protein R2)...	37	0.029
5	IM23_SCHMA (P19331) 23 kDa integral membrane protein (Sm23)	37	0.038
6	IM23_SCHHA (Q26499) 23 kDa integral membrane protein (Sh23)	37	0.038
7	TSN2_HUMAN (O60636) Tetraspanin-2 (Tspan-2)	37	0.038
8	CD53_HUMAN (P19397) Leukocyte surface antigen CD53 (Cell surface...	37	0.050
9	TSN18_MOUSE (Q80WR1) Tetraspanin-18 (Tspan-18)	36	0.066
10	TSN1_PONPY (Q5RC27) Tetraspanin-1 (Tspan-1)	36	0.066
11	TSN1_HUMAN (O60635) Tetraspanin-1 (Tspan-1) (Tetraspan NET-1) (T...	36	0.066
12	IM23_SCHJA (P27591) 23 kDa integral membrane protein (Sj23)	35	0.11
13	TSN2_RAT (Q9JJW1) Tetraspanin-2 (Tspan-2)	35	0.11
14	TSN18_BOVIN (Q58CY8) Tetraspanin-18 (Tspan-18)	35	0.19
15	CD53_RAT (P24485) Leukocyte surface antigen CD53 (Cell surface g...	34	0.33
16	TSN5_RAT (Q68VK5) Tetraspanin-5 (Tspan-5) (Transmembrane 4 super...	34	0.33
17	TSN5_MOUSE (P62080) Tetraspanin-5 (Tspan-5) (Transmembrane 4 sup...	34	0.33
18	TSN5_HUMAN (P62079) Tetraspanin-5 (Tspan-5) (Transmembrane 4 sup...	34	0.33
19	CD9_FELCA (P40239) CD9 antigen	33	0.43
20	CD9_BOVIN (P30932) CD9 antigen	33	0.43
21	CD53_MOUSE (Q61451) Leukocyte surface antigen CD53 (Cell surface...	33	0.56
22	TSN9_MOUSE (Q8BJU2) Tetraspanin-9 (Tspan-9) (Tetraspan NET-5)	33	0.73
23	TSN9_HUMAN (O75954) Tetraspanin-9 (Tspan-9) (Tetraspan NET-5)	33	0.73
24	TSN10_MOUSE (Q8VCF5) Tetraspanin-10 (Tspan-10) (Oculospanin)	33	0.73
25	CD9_PIG (Q8WMQ3) CD9 antigen	33	0.73
26	CD9_HUMAN (P21926) CD9 antigen (p24) (Leukocyte antigen MIC3) (M...	32	0.95
27	CD9_CERAE (P30409) CD9 antigen (27 kDa diphtheria toxin receptor...	32	0.95
28	TSN18_HUMAN (Q96SJ8) Tetraspanin-18 (Tspan-18)	32	0.95
29	CD9_RAT (P40241) CD9 antigen	32	0.95
30	CD9_MOUSE (P40240) CD9 antigen	32	0.95
31	TSN3_MOUSE (Q9QY33) Tetraspanin-3 (Tspan-3) (Transmembrane 4 sup...	32	1.2
32	CD81_SAGOE (Q9N0J9) CD81 protein	32	1.2
33	CD81_RAT (Q62745) CD81 antigen (26 kDa cell surface protein TAPA...	32	1.2
34	CD81_PANTR (P60034) CD81 antigen (26 kDa cell surface protein TA...	32	1.2
35	CD81_MOUSE (P35762) CD81 antigen (26 kDa cell surface protein TA...	32	1.2
36	CD81_HUMAN (P60033) CD81 antigen (26 kDa cell surface protein TA...	32	1.2
37	CD81_CERAE (O97703) CD81 antigen	32	1.2
38	CD63_MOUSE (P41731) CD63 antigen	32	1.2
39	CD63_FELCA (Q76B49) CD63 antigen	32	1.6
40	CD63_BOVIN (Q9XSK2) CD63 antigen	31	2.1
41	CD63_RAT (P28648) CD63 antigen (Mast cell antigen AD1)	31	2.1
42	TSN17_HUMAN (Q96FV3) Tetraspanin-17 (Tspan-17) (Transmembrane 4 ...	31	2.8
43	SIG10_HUMAN (Q96LC7) Sialic acid-binding Ig-like lectin 10 precu...	31	2.8
44	TSN17_MOUSE (Q9D7W4) Tetraspanin-17 (Tspan-17) (Transmembrane 4 ...	31	2.8
45	NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neur...	30	3.6
46	MYCN_CHICK (P18444) N-myc proto-oncogene protein	30	4.7
47	YGGA_AERHY (P52047) Putative amino acid transporter yggA	30	4.7
48	CD63_RABIT (Q28709) CD63 antigen	30	4.7
49	CD63_HUMAN (P08962) CD63 antigen (Melanoma-associated antigen ME...	30	4.7
50	KLC_STRPU (Q05090) Kinesin light chain (KLC)	30	6.1
51	RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)	30	6.1
52	NEO1_HUMAN (Q92859) Neogenin precursor	30	6.1
53	M3K2_MOUSE (Q61083) Mitogen-activated protein kinase kinase kina...	29	8.0
54	SPIKE_CVBLY (P25192) Spike glycoprotein precursor (Peplomer prot...	29	8.0
55	NEO1_RAT (P97603) Neogenin precursor (Fragment)	29	8.0
56	SYSM_MOUSE (Q9JJL8) Seryl-tRNA synthetase, mitochondrial precurs...	29	8.0
57	MKL1_MOUSE (Q8K4J6) MKL/myocardin-like protein 1 (Myocardin-rela...	29	8.0
58	TSN8_HUMAN (P19075) Tetraspanin-8 (Tspan-8) (Transmembrane 4 sup...	29	8.0

>TSN2_MOUSE (Q922J6) Tetraspanin-2 (Tspan-2)|
          Length = 221

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
 Frame = +2

Query: 11  MAACRGFFECLLRLL---NFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXEL 181
           M   RG   C+  LL   N    +AG A++ +G+     W R                  
Sbjct: 1   MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGL-----WFR------------------ 37

Query: 182 LMFGRPMLTVVALGEGGSFFDKLPEAWFI--YLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
             FG  M  +       S  DK PE +++  Y+ +G GA++  V  FGC GA   + C L
Sbjct: 38  --FGGTMKDL-------SSEDKSPEYFYVGLYVLVGAGALMMTVGFFGCCGAMRESQCVL 88

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>CD82_RAT (O70352) CD82 antigen (Metastasis suppressor homolog)|
          Length = 266

 Score = 37.7 bits (86), Expect = 0.023
 Identities = 29/117 (24%), Positives = 43/117 (36%)
 Frame = +2

Query: 14  AACRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFG 193
           A C    +  L L N    + G  ++G+G+++LA+                    +L   
Sbjct: 3   AGCVKVTKYFLFLFNLLFFILGAVILGFGVWILAD--------------KSSFISVLQTS 48

Query: 194 RPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 364
              L V A                 Y+FIGVGA+  ++   GCIGA     C L  Y
Sbjct: 49  SSSLQVGA-----------------YVFIGVGAITMLMGFLGCIGAVNEVRCLLGLY 88

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>CD82_MOUSE (P40237) CD82 antigen (Inducible membrane protein R2) (C33 antigen)|
           (IA4)
          Length = 266

 Score = 37.7 bits (86), Expect = 0.023
 Identities = 29/117 (24%), Positives = 43/117 (36%)
 Frame = +2

Query: 14  AACRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFG 193
           A C    +  L L N    + G  ++G+G+++LA+                    +L   
Sbjct: 3   AGCVKVTKYFLFLFNLLFFILGAVILGFGVWILAD--------------KNSFISVLQTS 48

Query: 194 RPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 364
              L V A                 Y+FIGVGA+  ++   GCIGA     C L  Y
Sbjct: 49  SSSLQVGA-----------------YVFIGVGAITIVMGFLGCIGAVNEVRCLLGLY 88

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>CD82_HUMAN (P27701) CD82 antigen (Inducible membrane protein R2) (C33 antigen)|
           (IA4) (Metastasis suppressor Kangai 1) (Suppressor of
           tumorigenicity-6) (Tetraspanin-27) (Tspan-27)
          Length = 267

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 29/117 (24%), Positives = 44/117 (37%)
 Frame = +2

Query: 14  AACRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFG 193
           +AC    +  L L N    + G  ++G+G+++LA+                    +L   
Sbjct: 3   SACIKVTKYFLFLFNLIFFILGAVILGFGVWILAD--------------KSSFISVLQTS 48

Query: 194 RPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 364
              L + A                 Y+FIGVGAV  ++   GCIGA     C L  Y
Sbjct: 49  SSSLRMGA-----------------YVFIGVGAVTMLMGFLGCIGAVNEVRCLLGLY 88

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>IM23_SCHMA (P19331) 23 kDa integral membrane protein (Sm23)|
          Length = 218

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = +2

Query: 179 LLMFGRPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLC 358
           L++ G      V   + G    K+ +A  I + + VG +I IVS  GC GA   N C L 
Sbjct: 27  LVLIGAGAYVEVKFSQYGDNLHKVWQAAPIAIIV-VGVIILIVSFLGCCGAIKENVCMLY 85

Query: 359 CYSFLV 376
            Y+F +
Sbjct: 86  MYAFFL 91

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>IM23_SCHHA (Q26499) 23 kDa integral membrane protein (Sh23)|
          Length = 218

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = +2

Query: 179 LLMFGRPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLC 358
           L++ G      V   + G    K+ +A  I + + VG +I IVS  GC GA   N C L 
Sbjct: 27  LVLIGAGAYVEVKFSQYGDNLHKVWQAAPIAIIV-VGVIILIVSFLGCCGAIKENVCMLY 85

Query: 359 CYSFLV 376
            Y+F +
Sbjct: 86  MYAFFL 91

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>TSN2_HUMAN (O60636) Tetraspanin-2 (Tspan-2)|
          Length = 221

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
 Frame = +2

Query: 11  MAACRGFFECLLRLL---NFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXEL 181
           M   RG   C+  LL   N    +AG A++ +G+     W R                  
Sbjct: 1   MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGL-----WFR------------------ 37

Query: 182 LMFGRPMLTVVALGEGGSFFDKLPEAWFI--YLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
             FG  +  +       S  DK PE +++  Y+ +G GA++  V  FGC GA   + C L
Sbjct: 38  --FGGAIKEL-------SSEDKSPEYFYVGLYVLVGAGALMMAVGFFGCCGAMRESQCVL 88

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>CD53_HUMAN (P19397) Leukocyte surface antigen CD53 (Cell surface glycoprotein|
           CD53) (Tetraspanin-25) (Tspan-25)
          Length = 219

 Score = 36.6 bits (83), Expect = 0.050
 Identities = 25/112 (22%), Positives = 40/112 (35%)
 Frame = +2

Query: 41  LLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRPMLTVVAL 220
           +L   N    + G  ++G+GIYLL                                    
Sbjct: 12  VLFFFNLLFWICGCCILGFGIYLLIH---------------------------------- 37

Query: 221 GEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 376
              G  F  LP      +F+ VG++I +V+  GC+G+   N C L  +  L+
Sbjct: 38  NNFGVLFHNLPSLTLGNVFVIVGSIIMVVAFLGCMGSIKENKCLLMSFFILL 89

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>TSN18_MOUSE (Q80WR1) Tetraspanin-18 (Tspan-18)|
          Length = 248

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 24/119 (20%), Positives = 46/119 (38%)
 Frame = +2

Query: 20  CRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRP 199
           C    + L+ + NFF+ + G  ++G GI++L +                     ++   P
Sbjct: 5   CLSCMKYLMFVFNFFVFLGGACLLGVGIWVLVD---------------PTGFREIVATNP 49

Query: 200 MLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 376
           +LT  A                 Y+ + +G ++F++   GC GA   N C L  +   +
Sbjct: 50  LLTTGA-----------------YIVLAMGGLLFLLGFLGCCGAVRENRCLLLFFFLFI 91

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>TSN1_PONPY (Q5RC27) Tetraspanin-1 (Tspan-1)|
          Length = 241

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 27/119 (22%), Positives = 44/119 (36%)
 Frame = +2

Query: 20  CRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRP 199
           C  F + ++ L N  + + G A++  GI     W+ I                L +FG  
Sbjct: 3   CFSFIKTMMILFNLLIFLCGAALLAVGI-----WVSIDGASF-----------LKIFGPL 46

Query: 200 MLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 376
             + +     G            Y  I  G V+F +   GC GA T + C L  + F++
Sbjct: 47  SSSAMQFVNVG------------YFLIAAGVVVFALGFLGCYGAKTESKCALMTFFFIL 93

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>TSN1_HUMAN (O60635) Tetraspanin-1 (Tspan-1) (Tetraspan NET-1) (Tetraspanin|
           TM4-C)
          Length = 241

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 27/119 (22%), Positives = 44/119 (36%)
 Frame = +2

Query: 20  CRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRP 199
           C  F + ++ L N  + + G A++  GI     W+ I                L +FG  
Sbjct: 3   CFSFIKTMMILFNLLIFLCGAALLAVGI-----WVSIDGASF-----------LKIFGPL 46

Query: 200 MLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 376
             + +     G            Y  I  G V+F +   GC GA T + C L  + F++
Sbjct: 47  SSSAMQFVNVG------------YFLIAAGVVVFALGFLGCYGAKTESKCALVTFFFIL 93

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>IM23_SCHJA (P27591) 23 kDa integral membrane protein (Sj23)|
          Length = 218

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = +2

Query: 278 IGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 376
           I VG VI IVS  GC GA   N C L  Y+F +
Sbjct: 59  IVVGVVILIVSFLGCCGAIKENVCMLYMYAFFL 91

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>TSN2_RAT (Q9JJW1) Tetraspanin-2 (Tspan-2)|
          Length = 221

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
 Frame = +2

Query: 11  MAACRGFFECLLRLL---NFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXEL 181
           M   RG   C+  LL   N    +AG A++ +G+     W R                  
Sbjct: 1   MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGL-----WFR------------------ 37

Query: 182 LMFGRPMLTVVALGEGGSFFDKLPEAWFI--YLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
             FG  +  +       S  +K PE +++  Y+ +G GA++  V  FGC GA   + C L
Sbjct: 38  --FGGTIKDL-------SSEEKSPEYFYVGLYVLVGAGALMMAVGFFGCCGAMRESQCVL 88

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>TSN18_BOVIN (Q58CY8) Tetraspanin-18 (Tspan-18)|
          Length = 249

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 22/119 (18%), Positives = 45/119 (37%)
 Frame = +2

Query: 20  CRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRP 199
           C    + L+ + NFF+ + G  ++G GI+++ +                     ++   P
Sbjct: 5   CLSCMKYLMFVFNFFIFLGGACLLGIGIWVMVD---------------PTGFREIVAANP 49

Query: 200 MLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 376
           +L   A                 Y+ + +G ++F++   GC GA   N C L  +   +
Sbjct: 50  LLITGA-----------------YILLAMGGLLFLLGFLGCCGAVRENKCLLLFFFLFI 91

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>CD53_RAT (P24485) Leukocyte surface antigen CD53 (Cell surface glycoprotein|
           CD53) (Leukocyte antigen MRC OX-44)
          Length = 218

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 25/112 (22%), Positives = 41/112 (36%)
 Frame = +2

Query: 41  LLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRPMLTVVAL 220
           +L   NF   V G  ++G+GI+LL +                                  
Sbjct: 11  VLFFFNFLFWVCGCCILGFGIHLLVQ---------------------------------- 36

Query: 221 GEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 376
              G  F  LP      + + VG++I +V+  GC+G+   N C L  +  L+
Sbjct: 37  NTYGILFRNLPFLTLGNVLVIVGSIIMVVAFLGCMGSIKENKCLLMSFFVLL 88

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>TSN5_RAT (Q68VK5) Tetraspanin-5 (Tspan-5) (Transmembrane 4 superfamily|
           member 9)
          Length = 268

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 367
           ++LF+ VG V+FI+   GCIGA   NT  L  +S
Sbjct: 62  VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFS 95

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>TSN5_MOUSE (P62080) Tetraspanin-5 (Tspan-5) (Transmembrane 4 superfamily|
           member 9) (Tetraspan NET-4)
          Length = 268

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 367
           ++LF+ VG V+FI+   GCIGA   NT  L  +S
Sbjct: 62  VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFS 95

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>TSN5_HUMAN (P62079) Tetraspanin-5 (Tspan-5) (Transmembrane 4 superfamily|
           member 9) (Tetraspan NET-4)
          Length = 268

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 367
           ++LF+ VG V+FI+   GCIGA   NT  L  +S
Sbjct: 62  VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFS 95

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>CD9_FELCA (P40239) CD9 antigen|
          Length = 225

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +2

Query: 242 DKLPEAWF--IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
           D  P +++  +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 47  DSQPSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCML 86

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>CD9_BOVIN (P30932) CD9 antigen|
          Length = 225

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL-CCYSFLV 376
           +Y+ IG GA++ +V   GC GA   + C L   +SFL+
Sbjct: 57  VYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFSFLL 94

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>CD53_MOUSE (Q61451) Leukocyte surface antigen CD53 (Cell surface glycoprotein|
           CD53)
          Length = 218

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 24/112 (21%), Positives = 40/112 (35%)
 Frame = +2

Query: 41  LLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRPMLTVVAL 220
           +L + N    V G  ++G+GIY L +                                  
Sbjct: 11  VLFIFNLLFWVCGCCILGFGIYFLVQ---------------------------------- 36

Query: 221 GEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 376
              G  F  LP      + + VG++I +V+  GC+G+   N C L  +  L+
Sbjct: 37  NTYGVLFRNLPFLTLGNILVIVGSIIMVVAFLGCMGSIKENKCLLMSFFVLL 88

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>TSN9_MOUSE (Q8BJU2) Tetraspanin-9 (Tspan-9) (Tetraspan NET-5)|
          Length = 239

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +2

Query: 212 VALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 364
           V+ G   +F    P      L I +G ++ +    GC+GA   N C L  +
Sbjct: 36  VSQGNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSF 86

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>TSN9_HUMAN (O75954) Tetraspanin-9 (Tspan-9) (Tetraspan NET-5)|
          Length = 239

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +2

Query: 212 VALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 364
           V+ G   +F    P      L I +G ++ +    GC+GA   N C L  +
Sbjct: 36  VSQGNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSF 86

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>TSN10_MOUSE (Q8VCF5) Tetraspanin-10 (Tspan-10) (Oculospanin)|
          Length = 331

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
 Frame = +2

Query: 185 MFGRPMLTVVALG---------EGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGT 337
           +F  P L  +A G         +G  +   +P    + L +G G V+ +VSL GC+GA  
Sbjct: 84  LFSLPSLLALAAGLWGLTVKRSQGIGWGGPVPTDPMLMLVLG-GLVVSVVSLSGCLGAFC 142

Query: 338 RNTCCLCCY 364
            N+C L  Y
Sbjct: 143 ENSCLLHWY 151

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>CD9_PIG (Q8WMQ3) CD9 antigen|
          Length = 225

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 57  VYILIGAGALMMVVGFLGCCGAVQESQCML 86

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>CD9_HUMAN (P21926) CD9 antigen (p24) (Leukocyte antigen MIC3)|
           (Motility-related protein) (MRP-1) (Tetraspanin-29)
           (Tspan-29)
          Length = 227

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 59  VYILIGAGALMMLVGFLGCCGAVQESQCML 88

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>CD9_CERAE (P30409) CD9 antigen (27 kDa diphtheria toxin receptor-associated|
           protein) (DRAP27)
          Length = 227

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 59  VYILIGAGALMMLVGFLGCCGAVQESQCML 88

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>TSN18_HUMAN (Q96SJ8) Tetraspanin-18 (Tspan-18)|
          Length = 248

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 21/119 (17%), Positives = 44/119 (36%)
 Frame = +2

Query: 20  CRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRP 199
           C    + L+ + NFF+ + G  ++  GI+++ +                     ++   P
Sbjct: 5   CLSCMKYLMFVFNFFIFLGGACLLAIGIWVMVD---------------PTGFREIVAANP 49

Query: 200 MLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 376
           +L   A                 Y+ + +G ++F++   GC GA   N C L  +   +
Sbjct: 50  LLLTGA-----------------YILLAMGGLLFLLGFLGCCGAVRENKCLLLFFFLFI 91

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>CD9_RAT (P40241) CD9 antigen|
          Length = 225

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 57  VYILIGAGALMMLVGFLGCCGAVQESQCML 86

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>CD9_MOUSE (P40240) CD9 antigen|
          Length = 225

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 57  VYILIGAGALMMLVGFLGCCGAVQESQCML 86

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>TSN3_MOUSE (Q9QY33) Tetraspanin-3 (Tspan-3) (Transmembrane 4 superfamily|
           member 8) (Tetraspanin TM4-A) (OSP-associated protein 1)
           (OAP-1)
          Length = 253

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 236 FFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 376
           FF+ +   +   + I VGA++FI+ L GC      + C L  + F++
Sbjct: 44  FFEDVYTLFPAVVIIAVGALLFIIGLIGCCATIRESRCGLATFVFIL 90

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>CD81_SAGOE (Q9N0J9) CD81 protein|
          Length = 236

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>CD81_RAT (Q62745) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target|
           of the antiproliferative antibody 1)
          Length = 236

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>CD81_PANTR (P60034) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target|
           of the antiproliferative antibody 1)
          Length = 236

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>CD81_MOUSE (P35762) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target|
           of the antiproliferative antibody 1)
          Length = 236

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>CD81_HUMAN (P60033) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target|
           of the antiproliferative antibody 1) (Tetraspanin-28)
           (Tspan-28)
          Length = 236

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>CD81_CERAE (O97703) CD81 antigen|
          Length = 236

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 355
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>CD63_MOUSE (P41731) CD63 antigen|
          Length = 237

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +2

Query: 272 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLVXXXXXXXXXXXXXXXXDHSWKDVIP 451
           + I VGA +F+V+  GC GA   N C +  ++  +                 + ++D + 
Sbjct: 55  VIIAVGAFLFLVAFVGCCGACKENYCLMITFAIFL---SLIMLVEVAVAIAGYVFRDQVK 111

Query: 452 VDKTQNF-DAMYDFLKEN 502
            +  ++F   M ++LK+N
Sbjct: 112 SEFNKSFQQQMQNYLKDN 129

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>CD63_FELCA (Q76B49) CD63 antigen|
          Length = 237

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
 Frame = +2

Query: 179 LLMFGRPMLTVVALGEGGSFFDK-------LPEAWFIYLFIGVGAVIFIVSLFGCIGAGT 337
           LL F    + ++A+G G     +        P +    + I VGA +F+V+  GC GA  
Sbjct: 17  LLAFCACAVGLIAVGVGAQLVLRQTIVQGATPGSLLPVVIIAVGAFLFLVAFVGCCGACK 76

Query: 338 RNTCCLCCYSFLV 376
            N C +  ++  +
Sbjct: 77  ENYCLMVTFAIFL 89

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>CD63_BOVIN (Q9XSK2) CD63 antigen|
          Length = 236

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 272 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 376
           + I VGA +F+V+  GC GA   N C +  ++  +
Sbjct: 55  VIIAVGAFLFLVAFVGCCGACKENYCLMITFAIFL 89

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>CD63_RAT (P28648) CD63 antigen (Mast cell antigen AD1)|
          Length = 237

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 272 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 376
           + I VGA +F+V+  GC GA   N C +  ++  +
Sbjct: 55  VIIAVGAFLFLVAFVGCCGACKENYCLMITFAIFL 89

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>TSN17_HUMAN (Q96FV3) Tetraspanin-17 (Tspan-17) (Transmembrane 4 superfamily|
           member 17) (Tetraspan protein SB134) (F-box only protein
           23)
          Length = 263

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 367
           ++LF+ VG V+ ++   GCIGA   NT  L  +S
Sbjct: 64  VWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFS 97

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>SIG10_HUMAN (Q96LC7) Sialic acid-binding Ig-like lectin 10 precursor|
           (Siglec-10) (Siglec-like protein 2)
          Length = 697

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +3

Query: 27  DSSSACLGCSTFSSPSPALPWSAMGSTCSRSG*GSPVVAE 146
           +  S CL C T SSP   L W+  G   S S    P V E
Sbjct: 372 EGQSLCLVCVTHSSPPARLSWTQRGQVLSPSQPSDPGVLE 411

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>TSN17_MOUSE (Q9D7W4) Tetraspanin-17 (Tspan-17) (Transmembrane 4 superfamily|
           member 17) (Tetraspan protein SB134) (F-box only protein
           23)
          Length = 270

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 266 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 367
           ++LF+ VG V+ ++   GCIGA   NT  L  +S
Sbjct: 64  VWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFS 97

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>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neurofilament|
           protein) (Neurofilament medium polypeptide) (NF-M)
          Length = 925

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -1

Query: 148 PSATTGDPHPLREQVDPIADHG-KAGDGEEKVEQPKQALEESP 23
           P+A +  P    E+V P A+ G + G+ +EKVE+ K+  +ESP
Sbjct: 685 PAAKSPAPKSPVEEVKPKAEAGAEKGEQKEKVEEEKKEAKESP 727

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>MYCN_CHICK (P18444) N-myc proto-oncogene protein|
          Length = 441

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = -3

Query: 248 ACRRNCRPLQGPRPSASGGRT*VTQPAGPETAVPLRHHRRSSSTPRAGRSHSRPWQGRR 72
           ACRR  +P +GP  +  GG   V +   P    P   ++R ++ P  G +   P  GRR
Sbjct: 168 ACRRREQPQRGPGRAELGGS--VPECVDPAVVFPFPVNKREAAVPSGGET---PRGGRR 221

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>YGGA_AERHY (P52047) Putative amino acid transporter yggA|
          Length = 225

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 310 SVWLHWSRDKEYMLLVLLFFLGHIINPC*GWRC 408
           S WL  SR     LL+LL     +++PC GWRC
Sbjct: 171 SPWLARSRQGYSKLLILL-----LVSPCWGWRC 198

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>CD63_RABIT (Q28709) CD63 antigen|
          Length = 237

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
 Frame = +2

Query: 179 LLMFGRPMLTVVALGEGGSFF-------DKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGT 337
           LL F    + ++A+G G              P +    + I VGA +F+V+  GC G   
Sbjct: 17  LLAFCACAVGLIAVGVGAQLVLSQTITHGATPGSLLPVVIIAVGAFLFLVAFVGCCGTCK 76

Query: 338 RNTCCLCCYSFLV 376
            N C +  ++  +
Sbjct: 77  ENYCLMITFAIFL 89

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>CD63_HUMAN (P08962) CD63 antigen (Melanoma-associated antigen ME491)|
           (Lysosome-associated membrane glycoprotein 3) (LAMP-3)
           (Ocular melanoma-associated antigen) (OMA81H)
           (Granulophysin) (Tetraspanin-30) (Tspan-30)
          Length = 237

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
 Frame = +2

Query: 179 LLMFGRPMLTVVALGEGGSFF-------DKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGT 337
           LL F    + ++A+G G              P +    + I VG  +F+V+  GC GA  
Sbjct: 17  LLAFCACAVGLIAVGVGAQLVLSQTIIQGATPGSLLPVVIIAVGVFLFLVAFVGCCGACK 76

Query: 338 RNTCCLCCYSFLV 376
            N C +  ++  +
Sbjct: 77  ENYCLMITFAIFL 89

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>KLC_STRPU (Q05090) Kinesin light chain (KLC)|
          Length = 686

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 16/60 (26%)
 Frame = -3

Query: 143 RHHRRSSSTPRAGRSHS---------------RPWQGRRR-*GKS*AA*AGTRRIPGTPP 12
           RHHRRSS TPR G + S                 W+ +R+   +S +  AG   IP +PP
Sbjct: 536 RHHRRSSGTPRHGSTESVSYEKTDGSEEVSIGVAWKAKRKAKDRSRSIPAGYVEIPRSPP 595

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>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)|
          Length = 574

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
 Frame = -3

Query: 242 RRNCRPLQGPRPSASGGRT*VTQPAGPE-----TAVPLRHHRRSSSTP 114
           RRN RP++G  P+ +   T +  PA P       A P+R   +SS +P
Sbjct: 512 RRNGRPVEGAEPAVAS--TPIAAPAAPRKPTQVVATPVRAANKSSGSP 557

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>NEO1_HUMAN (Q92859) Neogenin precursor|
          Length = 1461

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 33  SSACLGCSTFSSPSPALPWSAMGSTCSRSG*GSPVVAEGHRRLRP 167
           SS  L CS +S PSP + W   G+  +       +V++  R+L P
Sbjct: 68  SSVILNCSAYSEPSPKIEWKKDGTFLN-------LVSDDRRQLLP 105

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>M3K2_MOUSE (Q61083) Mitogen-activated protein kinase kinase kinase 2 (EC|
           2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2)
           (MEKK 2)
          Length = 619

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +1

Query: 124 EDLRWWRRGTAVSGPAG*VTYVRPPDADGRGP--WRGRQFLRQATRSMVHL 270
           +D R  RRG+ +  P   VT + PP    R P  WR  + L Q     V+L
Sbjct: 322 DDSRIRRRGSDIDNPTLTVTDISPPSRSPRAPTNWRLGKLLGQGAFGRVYL 372

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>SPIKE_CVBLY (P25192) Spike glycoprotein precursor (Peplomer protein) (E2)|
            [Contains: Spike protein S1 (90B); Spike protein S2
            (90A)]
          Length = 1363

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
 Frame = +2

Query: 260  WFIYLFIGVGAVIFIVSLF---GCIGAGTR--NTCCLCC 361
            W+++L IG+  V  +V LF    C G GT     C  CC
Sbjct: 1308 WYVWLLIGLAGVAMLVLLFFICCCTGCGTSCFKKCGGCC 1346

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>NEO1_RAT (P97603) Neogenin precursor (Fragment)|
          Length = 1377

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 33  SSACLGCSTFSSPSPALPWSAMGSTCSRSG*GSPVVAEGHRRLRP 167
           SS  L CS +S PSP + W   G+  +       +V++  R+L P
Sbjct: 37  SSVILNCSAYSEPSPNIEWKKDGTFLN-------LVSDDRRQLLP 74

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>SYSM_MOUSE (Q9JJL8) Seryl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.11) (Serine--tRNA ligase) (SerRSmt)
          Length = 518

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -2

Query: 429 WSKNMNAAPPASARINNMTKKE*QHKQHVFLVPAPMQPNRETMKITAPT 283
           ++  +NA   A  R+     +  Q K    LVPA +QP   T +ITAPT
Sbjct: 446 FAHTVNATACAVPRVLIALLESNQQKDGSVLVPAALQPYLGTDRITAPT 494

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>MKL1_MOUSE (Q8K4J6) MKL/myocardin-like protein 1 (Myocardin-related|
           transcription factor A) (MRTF-A) (Megakaryoblastic
           leukemia 1 protein homolog) (Basic SAP coiled-coil
           transcription activator)
          Length = 964

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 360 QHKQHVFLVPAPMQPNRETMKITAPTP 280
           QH  +  ++PAP +P+ ET   +APTP
Sbjct: 320 QHYNYQAILPAPPKPSAETPGSSAPTP 346

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>TSN8_HUMAN (P19075) Tetraspanin-8 (Tspan-8) (Transmembrane 4 superfamily|
           member 3) (Tumor-associated antigen CO-029)
          Length = 237

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 272 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 364
           + I VGA+I I+   GC GA   + C L  +
Sbjct: 58  ILIAVGAIIMILGFLGCCGAIKESRCMLLLF 88


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,251,893
Number of Sequences: 219361
Number of extensions: 1787455
Number of successful extensions: 6167
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 5823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6160
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result