ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal28c06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK067607.1| Oryza sativa (japonica cultivar-group) cDNA clon... 581 e-162
2gb|AY104680.1| Zea mays PCO092452 mRNA sequence 258 2e-65
3dbj|AK058746.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
5dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
6ref|XM_466621.1| Oryza sativa (japonica cultivar-group), mRNA 66 1e-07
7ref|NM_115828.3| Arabidopsis thaliana unknown protein AT3G59660 ... 54 6e-04
8gb|BT008357.1| Arabidopsis thaliana At3g59660 gene, complete cds 54 6e-04
9gb|AY062641.1| Arabidopsis thaliana putative protein (T16L24.21)... 54 6e-04
10emb|AL138659.1|ATT16L24 Arabidopsis thaliana DNA chromosome 3, B... 48 0.035
11dbj|AP001929.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 48 0.035
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
13dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
14dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.54
15gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.54
16emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb... 44 0.54
17emb|Z77131.1|CEC54C6 Caenorhabditis elegans Cosmid C54C6, comple... 42 2.1
18emb|AL138808.17| Human DNA sequence from clone RP5-974N19 on chr... 42 2.1
19emb|AJ698040.1| Suillus bovinus tubb1 gene for beta-tubulin 1, e... 42 2.1
20gb|AY112730.1| Suillus bovinus beta-tubulin mRNA, complete cds 42 2.1
21ref|NM_065327.2| Caenorhabditis elegans C54C6.2 (tubulin) mRNA, ... 42 2.1
22gb|AF267183.1|AF267183 Jakoba incarcerata beta-tubulin gene, par... 42 2.1
23gb|AE004514.1| Pseudomonas aeruginosa PAO1, section 75 of 529 of... 42 2.1
24gb|AC137517.6| Homo sapiens 3 BAC RP11-671N3 (Roswell Park Cance... 42 2.1
25dbj|AB196534.1| Crassostrea gigas mRNA for beta-tubulin, complet... 42 2.1
26gb|AY700005.1| Cylicocyclus nassatus beta tubulin isotype 2 gene... 42 2.1
27gb|AY666160.1| Cylicocyclus nassatus beta-tubulin isotype 2 mRNA... 42 2.1
28emb|AJ289244.1|TSE289244 Theileria sergenti partial beta tubulin... 42 2.1
29emb|X51668.1|CEBEN1GEE C.elegans DNA for ben-1, a beta-tubulin gene 42 2.1
30ref|XM_471574.1| Oryza sativa (japonica cultivar-group), predic... 40 8.4
31ref|XM_469912.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.4
32ref|XM_478940.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.4
33gb|AC102440.12| Mus musculus chromosome 1, clone RP24-146C18, co... 40 8.4
34ref|XM_361861.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.4
35gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.4
36gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom... 40 8.4
37ref|XM_741885.1| Aspergillus fumigatus Af293 C6 transcription fa... 40 8.4
38emb|CR974460.5| Pig DNA sequence from clone PigE-150I6 on chromo... 40 8.4
39gb|AC130206.2| Mus musculus BAC clone RP24-448F6 from chromosome... 40 8.4
40gb|AC159149.10| Mus musculus 10 BAC RP23-56F17 (Roswell Park Can... 40 8.4
41gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genom... 40 8.4
42gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genom... 40 8.4
43emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genom... 40 8.4
44emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4,... 40 8.4
45gb|AC110811.4| Homo sapiens BAC clone RP11-779N22 from 4, comple... 40 8.4
46gb|AC098675.2| Homo sapiens BAC clone RP11-370K14 from 4, comple... 40 8.4
47gb|AC182430.2| Pan troglodytes BAC clone CH251-398I16 from chrom... 40 8.4
48dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
49dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
50dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
51dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.4
52gb|AC074213.7| Homo sapiens BAC clone RP11-34K3 from 2, complete... 40 8.4
53dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome 40 8.4
54dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
55dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 8.4
56dbj|AK111226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.4
57dbj|AK108320.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.4
58gb|AC104921.9| Mus musculus chromosome 7, clone RP23-474B13, com... 40 8.4
59gb|AC155637.4| Mus musculus 10 BAC RP24-227O16 (Roswell Park Can... 40 8.4
60emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.4
61emb|AL157400.8| Human DNA sequence from clone RP11-80H5 on chrom... 40 8.4
62gb|AC170922.3| Mus musculus BAC clone CH36-2J1 from chromosome 1... 40 8.4 
>dbj|AK067607.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112L10, full
           insert sequence
          Length = 2143

 Score =  581 bits (293), Expect = e-162
 Identities = 518/593 (87%)
 Strand = Plus / Plus

                                                                       
Query: 27  gacgacctcggcctcgcccgggaactcgacggcgccgacaagtataagggaggctccacc 86
           |||||||||  |||||  ||||| |||||||||||||||||||| ||||| ||||| |  
Sbjct: 290 gacgacctcctcctcgtgcgggacctcgacggcgccgacaagtacaagggtggctcgagt 349

                                                                       
Query: 87  gggccgtcggcgtacgtggtgaagctggagctgctagccgcgaagaatttgatcgcggcc 146
           ||||| ||||||||| |||||||||| ||| || | || |||||||||||||| ||||| 
Sbjct: 350 gggccctcggcgtacatggtgaagctagagttgttggctgcgaagaatttgattgcggca 409

                                                                       
Query: 147 aacttgaacgggacctcggacccttatgcacttatcacctgcggcgaagagaagcgtttc 206
           ||||| || |||||||||||||| || ||| | ||||| |||||||||||||||||||||
Sbjct: 410 aacttaaatgggacctcggacccctacgcattgatcacttgcggcgaagagaagcgtttc 469

                                                                       
Query: 207 agctccatggttcctggctcaagaaacccaatgtggggagaggaattcaattttgttgtt 266
           || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 470 agttccatggttcctggctcaagaaacccaatgtggggagaggaattcaatttttttgtt 529

                                                                       
Query: 267 gactctcttcctgtaaagatacaggtgaaaatatatgattgggacattgtatggaagagc 326
           |||  |||||||||||||||| | |||| ||||||||| ||||||||||||||||| || 
Sbjct: 530 gacagtcttcctgtaaagataaatgtgacaatatatgactgggacattgtatggaaaagt 589

                                                                       
Query: 327 acaacacttggttctgttactgttccagtcgagtctgaggggcagagtggaccagtttgg 386
           ||    ||||||||||||| ||||||||| || || ||||| ||||||||||||||||||
Sbjct: 590 actgttcttggttctgttattgttccagttgaatccgagggacagagtggaccagtttgg 649

                                                                       
Query: 387 tatacacttgacagctcatcaggtcaggtttgtctccatattaaggcaatcaaggttcat 446
           ||||| ||||| ||  ||||||| ||||| || || |||||||||||||||||||| |||
Sbjct: 650 tatacgcttgatagtacatcaggccaggtgtgcctacatattaaggcaatcaaggtccat 709

                                                                       
Query: 447 gagagttcctccagggctctaaacaacactgccgaggctgatgctcgtagaaggatttcc 506
           |||||||| || ||||||||||| | | |||| ||||||| |||||||||||| ||||||
Sbjct: 710 gagagttcatcgagggctctaaatagctctgctgaggctggtgctcgtagaagaatttcc 769

                                                                       
Query: 507 ttagacaaacaaggtcctactgtagttcaccaaaaaccaggtcatttgcagacaattttt 566
           || || |||||||| || ||||||||||| ||||||||| ||||||||||||| || |||
Sbjct: 770 ttggataaacaaggacccactgtagttcatcaaaaaccaagtcatttgcagacgatattt 829

                                                                
Query: 567 gggctcccaccagatgaggttgttgaacacagctattcatgtgcacttgagag 619
           || || || |||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 830 ggacttcctccagatgaggttgttgaacatagttattcatgtgcacttgagag 882
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>gb|AY104680.1| Zea mays PCO092452 mRNA sequence
          Length = 690

 Score =  258 bits (130), Expect = 2e-65
 Identities = 217/246 (88%)
 Strand = Plus / Plus

                                                                       
Query: 371 gagtggaccagtttggtatacacttgacagctcatcaggtcaggtttgtctccatattaa 430
           |||||||||| ||||| |||||||||||||| ||||||| ||||| ||||| ||||||||
Sbjct: 47  gagtggaccaatttggcatacacttgacagcacatcaggccaggtgtgtcttcatattaa 106

                                                                       
Query: 431 ggcaatcaaggttcatgagagttcctccagggctctaaacaacactgccgaggctgatgc 490
            | ||||||||||||||| ||||||||||||||  |||| | | | || ||||||| |||
Sbjct: 107 agtaatcaaggttcatgaaagttcctccagggcaataaatagctcagctgaggctggtgc 166

                                                                       
Query: 491 tcgtagaaggatttccttagacaaacaaggtcctactgtagttcaccaaaaaccaggtca 550
           |||||||||||||||||| || || |||||||||||||||||||| ||||| ||||||| 
Sbjct: 167 tcgtagaaggatttccttggataagcaaggtcctactgtagttcatcaaaagccaggtcc 226

                                                                       
Query: 551 tttgcagacaatttttgggctcccaccagatgaggttgttgaacacagctattcatgtgc 610
           |||||||||||||||||  || || ||||||||||||||||| ||||| |||||||||||
Sbjct: 227 tttgcagacaatttttgaactgcctccagatgaggttgttgaccacagttattcatgtgc 286

                 
Query: 611 acttga 616
           ||||||
Sbjct: 287 acttga 292
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>dbj|AK058746.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H03, full
           insert sequence
          Length = 1391

 Score =  149 bits (75), Expect = 1e-32
 Identities = 117/131 (89%)
 Strand = Plus / Plus

                                                                       
Query: 489 gctcgtagaaggatttccttagacaaacaaggtcctactgtagttcaccaaaaaccaggt 548
           ||||||||||| |||||||| || |||||||| || ||||||||||| ||||||||| ||
Sbjct: 1   gctcgtagaagaatttccttggataaacaaggacccactgtagttcatcaaaaaccaagt 60

                                                                       
Query: 549 catttgcagacaatttttgggctcccaccagatgaggttgttgaacacagctattcatgt 608
           ||||||||||| || ||||| || || |||||||||||||||||||| || |||||||||
Sbjct: 61  catttgcagacgatatttggacttcctccagatgaggttgttgaacatagttattcatgt 120

                      
Query: 609 gcacttgagag 619
           |||||||||||
Sbjct: 121 gcacttgagag 131
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  125 bits (63), Expect = 2e-25
 Identities = 72/75 (96%)
 Strand = Plus / Minus

                                                                            
Query: 210      tccatggttcctggctcaagaaacccaatgtggggagaggaattcaattttgttgttgac 269
                ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 19857851 tccatggttcctggctcaagaaacccaatgtggggagaggaattcaatttttttgttgac 19857792

                               
Query: 270      tctcttcctgtaaag 284
                  |||||||||||||
Sbjct: 19857791 agtcttcctgtaaag 19857777



 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Minus

                                                                            
Query: 459      agggctctaaacaacactgccgaggctgatgctcgtagaaggatttccttagacaaacaa 518
                ||||||||||| | | |||| ||||||| |||||||||||| |||||||| || ||||||
Sbjct: 19856830 agggctctaaatagctctgctgaggctggtgctcgtagaagaatttccttggataaacaa 19856771

                                                                            
Query: 519      ggtcctactgtagttcaccaaaaaccaggtcatttgcagacaatttttgggctcccacca 578
                || || ||||||||||| ||||||||| ||||||||||||| || ||||| || || |||
Sbjct: 19856770 ggacccactgtagttcatcaaaaaccaagtcatttgcagacgatatttggacttcctcca 19856711

                        
Query: 579      gatgaggt 586
                ||||||||
Sbjct: 19856710 gatgaggt 19856703



 Score =  105 bits (53), Expect = 2e-19
 Identities = 107/125 (85%)
 Strand = Plus / Minus

                                                                            
Query: 291      gtgaaaatatatgattgggacattgtatggaagagcacaacacttggttctgttactgtt 350
                |||| ||||||||| ||||||||||||||||| || ||    ||||||||||||| ||||
Sbjct: 19857394 gtgacaatatatgactgggacattgtatggaaaagtactgttcttggttctgttattgtt 19857335

                                                                            
Query: 351      ccagtcgagtctgaggggcagagtggaccagtttggtatacacttgacagctcatcaggt 410
                ||||| || || ||||| ||||||||||||||||||||||| ||||| ||  ||||||| 
Sbjct: 19857334 ccagttgaatccgagggacagagtggaccagtttggtatacgcttgatagtacatcaggc 19857275

                     
Query: 411      caggt 415
                |||||
Sbjct: 19857274 caggt 19857270



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                            
Query: 126      gcgaagaatttgatcgcggccaacttgaacgggacctcggacccttatgcacttatcacc 185
                |||||||||||||| ||||| ||||| || |||||||||||||| || ||| | ||||| 
Sbjct: 19858528 gcgaagaatttgattgcggcaaacttaaatgggacctcggacccctacgcattgatcact 19858469

                                       
Query: 186      tgcggcgaagagaagcgtttcag 208
                |||||||||||||||||||||||
Sbjct: 19858468 tgcggcgaagagaagcgtttcag 19858446



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                               
Query: 408      ggtcaggtttgtctccatattaaggcaatcaaggttcatgagagttc 454
                |||||||| || || |||||||||||||||||||| |||||||||||
Sbjct: 19857195 ggtcaggtgtgcctacatattaaggcaatcaaggtccatgagagttc 19857149



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 583      aggttgttgaacacagctattcatgtgcacttgagag 619
                ||||||||||||| || ||||||||||||||||||||
Sbjct: 19856610 aggttgttgaacatagttattcatgtgcacttgagag 19856574



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 27       gacgacctcggcctcgcccgggaactcgacggcgccgacaag 68
                |||||||||  |||||  ||||| ||||||||||||||||||
Sbjct: 19858852 gacgacctcctcctcgtgcgggacctcgacggcgccgacaag 19858811



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 87       gggccgtcggcgtacgtggtgaag 110
                ||||| ||||||||||||||||||
Sbjct: 19858653 gggccctcggcgtacgtggtgaag 19858630
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>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0034B12
          Length = 124083

 Score =  125 bits (63), Expect = 2e-25
 Identities = 72/75 (96%)
 Strand = Plus / Minus

                                                                         
Query: 210   tccatggttcctggctcaagaaacccaatgtggggagaggaattcaattttgttgttgac 269
             ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 82291 tccatggttcctggctcaagaaacccaatgtggggagaggaattcaatttttttgttgac 82232

                            
Query: 270   tctcttcctgtaaag 284
               |||||||||||||
Sbjct: 82231 agtcttcctgtaaag 82217



 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Minus

                                                                         
Query: 459   agggctctaaacaacactgccgaggctgatgctcgtagaaggatttccttagacaaacaa 518
             ||||||||||| | | |||| ||||||| |||||||||||| |||||||| || ||||||
Sbjct: 81270 agggctctaaatagctctgctgaggctggtgctcgtagaagaatttccttggataaacaa 81211

                                                                         
Query: 519   ggtcctactgtagttcaccaaaaaccaggtcatttgcagacaatttttgggctcccacca 578
             || || ||||||||||| ||||||||| ||||||||||||| || ||||| || || |||
Sbjct: 81210 ggacccactgtagttcatcaaaaaccaagtcatttgcagacgatatttggacttcctcca 81151

                     
Query: 579   gatgaggt 586
             ||||||||
Sbjct: 81150 gatgaggt 81143



 Score =  105 bits (53), Expect = 2e-19
 Identities = 107/125 (85%)
 Strand = Plus / Minus

                                                                         
Query: 291   gtgaaaatatatgattgggacattgtatggaagagcacaacacttggttctgttactgtt 350
             |||| ||||||||| ||||||||||||||||| || ||    ||||||||||||| ||||
Sbjct: 81834 gtgacaatatatgactgggacattgtatggaaaagtactgttcttggttctgttattgtt 81775

                                                                         
Query: 351   ccagtcgagtctgaggggcagagtggaccagtttggtatacacttgacagctcatcaggt 410
             ||||| || || ||||| ||||||||||||||||||||||| ||||| ||  ||||||| 
Sbjct: 81774 ccagttgaatccgagggacagagtggaccagtttggtatacgcttgatagtacatcaggc 81715

                  
Query: 411   caggt 415
             |||||
Sbjct: 81714 caggt 81710



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 126   gcgaagaatttgatcgcggccaacttgaacgggacctcggacccttatgcacttatcacc 185
             |||||||||||||| ||||| ||||| || |||||||||||||| || ||| | ||||| 
Sbjct: 82968 gcgaagaatttgattgcggcaaacttaaatgggacctcggacccctacgcattgatcact 82909

                                    
Query: 186   tgcggcgaagagaagcgtttcag 208
             |||||||||||||||||||||||
Sbjct: 82908 tgcggcgaagagaagcgtttcag 82886



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                            
Query: 408   ggtcaggtttgtctccatattaaggcaatcaaggttcatgagagttc 454
             |||||||| || || |||||||||||||||||||| |||||||||||
Sbjct: 81635 ggtcaggtgtgcctacatattaaggcaatcaaggtccatgagagttc 81589



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                  
Query: 583   aggttgttgaacacagctattcatgtgcacttgagag 619
             ||||||||||||| || ||||||||||||||||||||
Sbjct: 81050 aggttgttgaacatagttattcatgtgcacttgagag 81014



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 27    gacgacctcggcctcgcccgggaactcgacggcgccgacaag 68
             |||||||||  |||||  ||||| ||||||||||||||||||
Sbjct: 83292 gacgacctcctcctcgtgcgggacctcgacggcgccgacaag 83251



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 87    gggccgtcggcgtacgtggtgaag 110
             ||||| ||||||||||||||||||
Sbjct: 83093 gggccctcggcgtacgtggtgaag 83070
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>ref|XM_466621.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1386

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                       
Query: 144 gccaacttgaacgggacctcggacccttatgcacttatcacctgcggcgaagagaagcgt 203
           |||||||||||||||| ||| || ||||| ||  | ||| ||||||||||  |||  || 
Sbjct: 388 gccaacttgaacgggagctccgatccttacgccgtcatctcctgcggcgagcagagacgc 447

                                                                
Query: 204 ttcagctccatggttcctggctcaagaaacccaatgtggggagaggaattcaa 256
           ||||| |||||||| ||| |||||||||||||  ||||||| ||||| |||||
Sbjct: 448 ttcagttccatggtgcctagctcaagaaacccgttgtggggggaggagttcaa 500
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>ref|NM_115828.3| Arabidopsis thaliana unknown protein AT3G59660 mRNA, complete cds
          Length = 2206

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 198 aagcgtttcagctccatggttcctggctcaagaaacccaatgtggggagaggaattcaat 257
           ||||| ||||| || ||||| |||||||| ||||| ||||||||||| || || ||||||
Sbjct: 513 aagcgattcagttctatggtccctggctcgagaaatccaatgtggggtgaagagttcaat 572

              
Query: 258 ttt 260
           |||
Sbjct: 573 ttt 575



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 579 gatgaggttgttgaacacagctattcatgtgcacttgagag 619
           ||||||||||| || ||||| ||||||||||| || |||||
Sbjct: 891 gatgaggttgtcgagcacagttattcatgtgccctggagag 931
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>gb|BT008357.1| Arabidopsis thaliana At3g59660 gene, complete cds
          Length = 1785

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 198 aagcgtttcagctccatggttcctggctcaagaaacccaatgtggggagaggaattcaat 257
           ||||| ||||| || ||||| |||||||| ||||| ||||||||||| || || ||||||
Sbjct: 340 aagcgattcagttctatggtccctggctcgagaaatccaatgtggggtgaagagttcaat 399

              
Query: 258 ttt 260
           |||
Sbjct: 400 ttt 402



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 579 gatgaggttgttgaacacagctattcatgtgcacttgagag 619
           ||||||||||| || ||||| ||||||||||| || |||||
Sbjct: 718 gatgaggttgtcgagcacagttattcatgtgccctggagag 758
to top
>gb|AY062641.1| Arabidopsis thaliana putative protein (T16L24.21) mRNA, complete
           cds
          Length = 2157

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 198 aagcgtttcagctccatggttcctggctcaagaaacccaatgtggggagaggaattcaat 257
           ||||| ||||| || ||||| |||||||| ||||| ||||||||||| || || ||||||
Sbjct: 513 aagcgattcagttctatggtccctggctcgagaaatccaatgtggggtgaagagttcaat 572

              
Query: 258 ttt 260
           |||
Sbjct: 573 ttt 575



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 579 gatgaggttgttgaacacagctattcatgtgcacttgagag 619
           ||||||||||| || ||||| ||||||||||| || |||||
Sbjct: 891 gatgaggttgtcgagcacagttattcatgtgccctggagag 931
to top
>emb|AL138659.1|ATT16L24 Arabidopsis thaliana DNA chromosome 3, BAC clone T16L24
          Length = 91851

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 213   atggttcctggctcaagaaacccaatgtggggagaggaattcaatttt 260
             ||||| |||||||| ||||| ||||||||||| || || |||||||||
Sbjct: 60607 atggtccctggctcgagaaatccaatgtggggtgaagagttcaatttt 60560
to top
>dbj|AP001929.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-640N11, complete
             sequence
          Length = 161547

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 443   tcatgagagttcctccagggctct 466
             ||||||||||||||||||||||||
Sbjct: 66943 tcatgagagttcctccagggctct 66920
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 210      tccatggttcctggctcaagaaacccaatgtggggagaggaattcaa 256
                |||||||| ||| |||||||||||||  ||||||| ||||| |||||
Sbjct: 23740566 tccatggtgcctagctcaagaaacccgttgtggggggaggagttcaa 23740612
to top
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1058_F07
          Length = 95841

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 210   tccatggttcctggctcaagaaacccaatgtggggagaggaattcaa 256
             |||||||| ||| |||||||||||||  ||||||| ||||| |||||
Sbjct: 51150 tccatggtgcctagctcaagaaacccgttgtggggggaggagttcaa 51196
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 19      cgggcgccgacgacctcggcctcgcc 44
               |||||||||||||| |||||||||||
Sbjct: 4169633 cgggcgccgacgacgtcggcctcgcc 4169658



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 23       cgccgacgacctcggcctcg 42
                ||||||||||||||||||||
Sbjct: 21800974 cgccgacgacctcggcctcg 21800993
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 19      cgggcgccgacgacctcggcctcgcc 44
               |||||||||||||| |||||||||||
Sbjct: 4169620 cgggcgccgacgacgtcggcctcgcc 4169645



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 23       cgccgacgacctcggcctcg 42
                ||||||||||||||||||||
Sbjct: 21729319 cgccgacgacctcggcctcg 21729338
to top
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 123469

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 19     cgggcgccgacgacctcggcctcgcc 44
              |||||||||||||| |||||||||||
Sbjct: 112029 cgggcgccgacgacgtcggcctcgcc 112054
to top
>emb|Z77131.1|CEC54C6 Caenorhabditis elegans Cosmid C54C6, complete sequence
          Length = 35500

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 210   tccatggttcctggctcaaga 230
             |||||||||||||||||||||
Sbjct: 17265 tccatggttcctggctcaaga 17285
to top
>emb|AL138808.17| Human DNA sequence from clone RP5-974N19 on chromosome 20 Contains a
             novel gene and the 5' end of a novel gene, complete
             sequence
          Length = 89487

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 305   ttgggacattgtatggaagag 325
             |||||||||||||||||||||
Sbjct: 39077 ttgggacattgtatggaagag 39097
to top
>emb|AJ698040.1| Suillus bovinus tubb1 gene for beta-tubulin 1, exons 1-10
          Length = 2544

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 210 tccatggttcctggctcaaga 230
           |||||||||||||||||||||
Sbjct: 796 tccatggttcctggctcaaga 776
to top
>gb|AY112730.1| Suillus bovinus beta-tubulin mRNA, complete cds
          Length = 1584

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 210 tccatggttcctggctcaaga 230
           |||||||||||||||||||||
Sbjct: 260 tccatggttcctggctcaaga 240
to top
>ref|NM_065327.2| Caenorhabditis elegans C54C6.2 (tubulin) mRNA, complete cds
          Length = 1383

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 210 tccatggttcctggctcaaga 230
           |||||||||||||||||||||
Sbjct: 236 tccatggttcctggctcaaga 216
to top
>gb|AF267183.1|AF267183 Jakoba incarcerata beta-tubulin gene, partial cds
          Length = 1162

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 210 tccatggttcctggctcaaga 230
           |||||||||||||||||||||
Sbjct: 177 tccatggttcctggctcaaga 157
to top
>gb|AE004514.1| Pseudomonas aeruginosa PAO1, section 75 of 529 of the complete genome
          Length = 10522

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 184  cctgcggcgaagagaagcgtt 204
            |||||||||||||||||||||
Sbjct: 9726 cctgcggcgaagagaagcgtt 9746
to top
>gb|AC137517.6| Homo sapiens 3 BAC RP11-671N3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 105622

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 542   accaggtcatttgcagacaattttt 566
             |||||||| ||||||||||||||||
Sbjct: 87137 accaggtcttttgcagacaattttt 87113
to top
>dbj|AB196534.1| Crassostrea gigas mRNA for beta-tubulin, complete cds
          Length = 1610

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 210 tccatggttcctggctcaaga 230
           |||||||||||||||||||||
Sbjct: 294 tccatggttcctggctcaaga 274
to top
>gb|AY700005.1| Cylicocyclus nassatus beta tubulin isotype 2 gene, 3' UTR and
           partial cds
          Length = 2605

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 210 tccatggttcctggctcaaga 230
           |||||||||||||||||||||
Sbjct: 177 tccatggttcctggctcaaga 157
to top
>gb|AY666160.1| Cylicocyclus nassatus beta-tubulin isotype 2 mRNA, complete cds
          Length = 1442

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 210 tccatggttcctggctcaaga 230
           |||||||||||||||||||||
Sbjct: 279 tccatggttcctggctcaaga 259
to top
>emb|AJ289244.1|TSE289244 Theileria sergenti partial beta tubulin gene, exons 1-2
          Length = 367

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 210 tccatggttcctggctcaaga 230
           |||||||||||||||||||||
Sbjct: 265 tccatggttcctggctcaaga 245
to top
>emb|X51668.1|CEBEN1GEE C.elegans DNA for ben-1, a beta-tubulin gene
          Length = 3949

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 210  tccatggttcctggctcaaga 230
            |||||||||||||||||||||
Sbjct: 1496 tccatggttcctggctcaaga 1476
to top
>ref|XM_471574.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1353

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  ggcgccgacgacctcggcctcgcc 44
           ||||||||||| ||||||||||||
Sbjct: 105 ggcgccgacgagctcggcctcgcc 82
to top
>ref|XM_469912.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2178

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgacgacctcggcctcg 42
           ||||||||||||||||||||
Sbjct: 732 cgccgacgacctcggcctcg 751
to top
>ref|XM_478940.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 922

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 23  cgccgacgacctcggcctcg 42
           ||||||||||||||||||||
Sbjct: 344 cgccgacgacctcggcctcg 325
to top
>gb|AC102440.12| Mus musculus chromosome 1, clone RP24-146C18, complete sequence
          Length = 144770

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 278   tgtaaagatacaggtgaaaatata 301
             |||||||||| |||||||||||||
Sbjct: 88349 tgtaaagataaaggtgaaaatata 88372
to top
>ref|XM_361861.1| Magnaporthe grisea 70-15 hypothetical protein (MG04335.4) partial
           mRNA
          Length = 2058

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 24  gccgacgacctcggcctcgc 43
           ||||||||||||||||||||
Sbjct: 237 gccgacgacctcggcctcgc 218
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 23       cgccgacgacctcggcctcg 42
                ||||||||||||||||||||
Sbjct: 31482447 cgccgacgacctcggcctcg 31482466



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 274      ttcctgtaaagatacaggtgaaaa 297
                ||||||||||| ||||||||||||
Sbjct: 25099597 ttcctgtaaagttacaggtgaaaa 25099574
to top
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
              sequence
          Length = 133449

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     cgccgacgacctcggcctcg 42
              ||||||||||||||||||||
Sbjct: 110149 cgccgacgacctcggcctcg 110130
to top
>ref|XM_741885.1| Aspergillus fumigatus Af293 C6 transcription factor (Afu8g02280)
           partial mRNA
          Length = 2286

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 cagtcgagtctgaggggcag 371
           ||||||||||||||||||||
Sbjct: 464 cagtcgagtctgaggggcag 483
to top
>emb|CR974460.5| Pig DNA sequence from clone PigE-150I6 on chromosome 7, complete
             sequence
          Length = 122162

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 359   gtctgaggggcagagtggaccagt 382
             ||||||||||||||||| ||||||
Sbjct: 63913 gtctgaggggcagagtgaaccagt 63936
to top
>gb|AC130206.2| Mus musculus BAC clone RP24-448F6 from chromosome 13, complete sequence
          Length = 155659

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   gaggaattcaattttgttgt 265
             ||||||||||||||||||||
Sbjct: 52083 gaggaattcaattttgttgt 52102
to top
>gb|AC159149.10| Mus musculus 10 BAC RP23-56F17 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 219585

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 590  tgaacacagctattcatgtg 609
            ||||||||||||||||||||
Sbjct: 2464 tgaacacagctattcatgtg 2445
to top
>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete
              sequence
          Length = 170020

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 274    ttcctgtaaagatacaggtgaaaa 297
              ||||||||||| ||||||||||||
Sbjct: 131404 ttcctgtaaagttacaggtgaaaa 131381
to top
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete
             sequence
          Length = 159091

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    cgccgacgacctcggcctcg 42
             ||||||||||||||||||||
Sbjct: 13353 cgccgacgacctcggcctcg 13334
to top
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16
          Length = 349260

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 15     ccagcgggcgccgacgacctcggcctcg 42
              ||||||||||| | ||||||||||||||
Sbjct: 249537 ccagcgggcgcggccgacctcggcctcg 249564
to top
>emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032D24,
              complete sequence
          Length = 132465

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 21     ggcgccgacgacctcggcctcgcc 44
              ||||||||||| ||||||||||||
Sbjct: 118739 ggcgccgacgagctcggcctcgcc 118716
to top
>gb|AC110811.4| Homo sapiens BAC clone RP11-779N22 from 4, complete sequence
          Length = 21104

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 308  ggacattgtatggaagagca 327
            ||||||||||||||||||||
Sbjct: 7467 ggacattgtatggaagagca 7448
to top
>gb|AC098675.2| Homo sapiens BAC clone RP11-370K14 from 4, complete sequence
          Length = 91915

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 252   ttcaattttgttgttgactctctt 275
             |||||||||||| |||||||||||
Sbjct: 67472 ttcaattttgttcttgactctctt 67495
to top
>gb|AC182430.2| Pan troglodytes BAC clone CH251-398I16 from chromosome 4, complete
             sequence
          Length = 145600

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   ggacattgtatggaagagca 327
             ||||||||||||||||||||
Sbjct: 66285 ggacattgtatggaagagca 66304
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 21       ggcgccgacgacctcggcctcgcc 44
                ||||||||||| ||||||||||||
Sbjct: 12444711 ggcgccgacgagctcggcctcgcc 12444688
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 23       cgccgacgacctcggcctcg 42
                ||||||||||||||||||||
Sbjct: 23920103 cgccgacgacctcggcctcg 23920084
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 23       cgccgacgacctcggcctcg 42
                ||||||||||||||||||||
Sbjct: 31572963 cgccgacgacctcggcctcg 31572982



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 274      ttcctgtaaagatacaggtgaaaa 297
                ||||||||||| ||||||||||||
Sbjct: 25190906 ttcctgtaaagttacaggtgaaaa 25190883
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 41      cgcccgggaactcgacggcg 60
               ||||||||||||||||||||
Sbjct: 8446494 cgcccgggaactcgacggcg 8446513
to top
>gb|AC074213.7| Homo sapiens BAC clone RP11-34K3 from 2, complete sequence
          Length = 176539

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 529    tagttcaccaaaaaccaggtcatt 552
              ||||||||||||||| ||||||||
Sbjct: 121423 tagttcaccaaaaacaaggtcatt 121400
to top
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome
          Length = 1584804

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 143   ggccaacttgaacgggacctcgga 166
             ||||||||||||||||| ||||||
Sbjct: 83778 ggccaacttgaacgggaactcgga 83801
to top
>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0005G07
          Length = 142850

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    cgccgacgacctcggcctcg 42
             ||||||||||||||||||||
Sbjct: 75030 cgccgacgacctcggcctcg 75011
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 137     gatcgcggccaacttgaacg 156
               ||||||||||||||||||||
Sbjct: 3612430 gatcgcggccaacttgaacg 3612449



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     ccgggaactcgacggcgccg 63
              ||||||||||||||||||||
Sbjct: 335883 ccgggaactcgacggcgccg 335864
to top
>dbj|AK111226.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-D09, full
           insert sequence
          Length = 2493

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgacgacctcggcctcg 42
           ||||||||||||||||||||
Sbjct: 869 cgccgacgacctcggcctcg 888
to top
>dbj|AK108320.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-H01, full
           insert sequence
          Length = 922

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 23  cgccgacgacctcggcctcg 42
           ||||||||||||||||||||
Sbjct: 344 cgccgacgacctcggcctcg 325
to top
>gb|AC104921.9| Mus musculus chromosome 7, clone RP23-474B13, complete sequence
          Length = 182487

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 537    caaaaaccaggtcatttgca 556
              ||||||||||||||||||||
Sbjct: 115805 caaaaaccaggtcatttgca 115786
to top
>gb|AC155637.4| Mus musculus 10 BAC RP24-227O16 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 159189

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 590   tgaacacagctattcatgtg 609
             ||||||||||||||||||||
Sbjct: 94920 tgaacacagctattcatgtg 94939
to top
>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 186030

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    cgccgacgacctcggcctcg 42
             ||||||||||||||||||||
Sbjct: 11577 cgccgacgacctcggcctcg 11558
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>emb|AL157400.8| Human DNA sequence from clone RP11-80H5 on chromosome 10 Contains the
              PANK1 gene for pantothenate kinase 1, a pantothenate kinase
              1 (PANK1) pseudogene, four novel genes, the 5' end of the
              MPHOSPH1 gene for M-phase phosphoprotein 1, a Homo sapiens
              miR-107-precursor-10 micro RNA and two CpG islands,
              complete sequence
          Length = 148396

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    tcaggtttgtctccatattaaggc 433
              ||||||||||||||| ||||||||
Sbjct: 114438 tcaggtttgtctccacattaaggc 114461
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>gb|AC170922.3| Mus musculus BAC clone CH36-2J1 from chromosome 13, complete sequence
          Length = 178680

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   gaggaattcaattttgttgt 265
             ||||||||||||||||||||
Sbjct: 46824 gaggaattcaattttgttgt 46805


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,389,065
Number of Sequences: 3902068
Number of extensions: 5389065
Number of successful extensions: 97841
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97060
Number of HSP's gapped (non-prelim): 777
length of query: 619
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 596
effective length of database: 17,143,297,704
effective search space: 10217405431584
effective search space used: 10217405431584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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