ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal28b16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
2dbj|AP003574.3| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
3dbj|AK068937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
4dbj|AK066777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
6emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4,... 48 0.022
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.34
9emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC OJ1618... 44 0.34
10dbj|AP007285.1| Lotus japonicus genomic DNA, chromosome 2, clone... 44 0.34
11gb|AC124963.32| Medicago truncatula clone mth2-24f5, complete se... 42 1.3
12gb|AF459722.1| Elaeocarpus angustifolius clone scu09Eg microsate... 42 1.3
13dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.3
14dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
15gb|AC138303.4| Mus musculus BAC clone RP23-43G12 from chromosome... 42 1.3
16gb|AE016753.1| Mus musculus chromosome 10 high-growth region, se... 42 1.3
17dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
18dbj|AP005926.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
19ref|NM_114988.2| Arabidopsis thaliana unknown protein AT3G51290 ... 40 5.3
20ref|XM_509007.1| PREDICTED: Pan troglodytes similar to REST/NRSF... 40 5.3
21ref|NM_153026.1| Homo sapiens prickle-like 1 (Drosophila) (PRICK... 40 5.3
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.3
23gb|AC163353.3| Mus musculus BAC clone RP23-55G7 from chromosome ... 40 5.3
24gb|AF399844.1| Homo sapiens REST/NRSF-interacting lim domain pro... 40 5.3
25gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genom... 40 5.3
26gb|AC137825.26| Medicago truncatula clone mth2-23j1, complete se... 40 5.3
27emb|AL356433.19| Human DNA sequence from clone RP11-453F1 on chr... 40 5.3
28gb|BC042722.1| Homo sapiens prickle-like 1 (Drosophila), mRNA (c... 40 5.3
29gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genom... 40 5.3
30emb|AL132980.3|ATF24M12 Arabidopsis thaliana DNA chromosome 3, B... 40 5.3
31gb|AC079601.25| Homo sapiens 12 BAC RP11-328C8 (Roswell Park Can... 40 5.3
32dbj|AK122877.1| Homo sapiens cDNA FLJ16519 fis, clone NT2RI30076... 40 5.3
33dbj|AK056499.1| Homo sapiens cDNA FLJ31937 fis, clone NT2RP70065... 40 5.3
34dbj|AK056189.1| Homo sapiens cDNA FLJ31627 fis, clone NT2RI2003338 40 5.3
35gb|AF149806.1| Oryza sativa hypothetical protein, fertilin alpha... 40 5.3
36gb|AC011260.8| Homo sapiens, clone RP11-1E21, complete sequence 40 5.3
37gb|AC092135.4| Homo sapiens chromosome 16 clone RP11-274A11, com... 40 5.3
38dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
39gb|AC099480.5| Homo sapiens chromosome 16 clone CTB-159O23, comp... 40 5.3
40emb|BX824890.1|CNS0A7UL Arabidopsis thaliana Full-length cDNA Co... 40 5.3
41gb|AC016776.6| Homo sapiens BAC clone RP11-574K22 from 2, comple... 40 5.3
42gb|AC016751.7| Homo sapiens BAC clone RP11-504O20 from 2, comple... 40 5.3
43ref|XM_343855.2| PREDICTED: Rattus norvegicus similar to RUN dom... 40 5.3
44dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
45emb|BX005213.15| Mouse DNA sequence from clone RP23-412I2 on chr... 40 5.3
46gb|AC127328.6| Mus musculus BAC clone RP23-259B8 from 6, complet... 40 5.3 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                            
Query: 160      ggccatggaagtggtttcttccagccactcttgcttggcatttcatcaaacacctagcag 219
                |||||||||||||||||||||||||||||| |||||||||||| | | ||||||||||||
Sbjct: 14370264 ggccatggaagtggtttcttccagccactcctgcttggcatttaaccgaacacctagcag 14370323

                                                 
Query: 220      tgctcggaggttcctgggcactggccttggtcc 252
                |||| ||||||| | ||| | ||| ||||||||
Sbjct: 14370324 tgcttggaggtttccggggaatggtcttggtcc 14370356



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     tcttcctcctcctccgctct 80
              ||||||||||||||||||||
Sbjct: 393092 tcttcctcctcctccgctct 393073
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>dbj|AP003574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0526E12
          Length = 150872

 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                         
Query: 160   ggccatggaagtggtttcttccagccactcttgcttggcatttcatcaaacacctagcag 219
             |||||||||||||||||||||||||||||| |||||||||||| | | ||||||||||||
Sbjct: 98139 ggccatggaagtggtttcttccagccactcctgcttggcatttaaccgaacacctagcag 98198

                                              
Query: 220   tgctcggaggttcctgggcactggccttggtcc 252
             |||| ||||||| | ||| | ||| ||||||||
Sbjct: 98199 tgcttggaggtttccggggaatggtcttggtcc 98231
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>dbj|AK068937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003K12, full
           insert sequence
          Length = 1830

 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                       
Query: 160 ggccatggaagtggtttcttccagccactcttgcttggcatttcatcaaacacctagcag 219
           |||||||||||||||||||||||||||||| |||||||||||| | | ||||||||||||
Sbjct: 90  ggccatggaagtggtttcttccagccactcctgcttggcatttaaccgaacacctagcag 149

                                            
Query: 220 tgctcggaggttcctgggcactggccttggtcc 252
           |||| ||||||| | ||| | ||| ||||||||
Sbjct: 150 tgcttggaggtttccggggaatggtcttggtcc 182
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>dbj|AK066777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075L23, full
           insert sequence
          Length = 2082

 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                       
Query: 160 ggccatggaagtggtttcttccagccactcttgcttggcatttcatcaaacacctagcag 219
           |||||||||||||||||||||||||||||| |||||||||||| | | ||||||||||||
Sbjct: 109 ggccatggaagtggtttcttccagccactcctgcttggcatttaaccgaacacctagcag 168

                                            
Query: 220 tgctcggaggttcctgggcactggccttggtcc 252
           |||| ||||||| | ||| | ||| ||||||||
Sbjct: 169 tgcttggaggtttccggggaatggtcttggtcc 201
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 196     ggcatttcatcaaacacctagcag 219
               ||||||||||||||||||||||||
Sbjct: 5500632 ggcatttcatcaaacacctagcag 5500609
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>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01,
             complete sequence
          Length = 150283

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 196   ggcatttcatcaaacacctagcag 219
             ||||||||||||||||||||||||
Sbjct: 55262 ggcatttcatcaaacacctagcag 55239
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 65      cctcctcctccgctctactgtg 86
               ||||||||||||||||||||||
Sbjct: 5916365 cctcctcctccgctctactgtg 5916386
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 65      cctcctcctccgctctactgtg 86
               ||||||||||||||||||||||
Sbjct: 5916358 cctcctcctccgctctactgtg 5916379
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>emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC OJ1618_C05 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 169662

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 65     cctcctcctccgctctactgtg 86
              ||||||||||||||||||||||
Sbjct: 112010 cctcctcctccgctctactgtg 112031
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>dbj|AP007285.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01H08, TM0053,
           complete sequence
          Length = 109326

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 193 cttggcatttcatcaaacacct 214
           ||||||||||||||||||||||
Sbjct: 427 cttggcatttcatcaaacacct 406
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>gb|AC124963.32| Medicago truncatula clone mth2-24f5, complete sequence
          Length = 159515

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 194    ttggcatttcatcaaacacctagca 218
              ||||||||||||||||||| |||||
Sbjct: 133944 ttggcatttcatcaaacacttagca 133920
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>gb|AF459722.1| Elaeocarpus angustifolius clone scu09Eg microsatellite sequence
          Length = 688

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 195 tggcatttcatcaaacaccta 215
           |||||||||||||||||||||
Sbjct: 76  tggcatttcatcaaacaccta 96
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 5       tcctccgccgaacaagcctcgggca 29
               |||||||||||||| ||||||||||
Sbjct: 1292137 tcctccgccgaacaggcctcgggca 1292113
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 194     ttggcatttcatcaaacacct 214
               |||||||||||||||||||||
Sbjct: 8505117 ttggcatttcatcaaacacct 8505097
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>gb|AC138303.4| Mus musculus BAC clone RP23-43G12 from chromosome 12, complete sequence
          Length = 207693

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 226   gaggttcctgggcactggcct 246
             |||||||||||||||||||||
Sbjct: 60776 gaggttcctgggcactggcct 60756
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>gb|AE016753.1| Mus musculus chromosome 10 high-growth region, section 1 of 2 of the
              complete sequence
          Length = 350029

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 60     ttcttcctcctcctccgctct 80
              |||||||||||||||||||||
Sbjct: 249511 ttcttcctcctcctccgctct 249531
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>dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0079G12
          Length = 139796

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 194   ttggcatttcatcaaacacct 214
             |||||||||||||||||||||
Sbjct: 26327 ttggcatttcatcaaacacct 26307
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>dbj|AP005926.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0054E15
          Length = 142898

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 194    ttggcatttcatcaaacacct 214
              |||||||||||||||||||||
Sbjct: 130466 ttggcatttcatcaaacacct 130446
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>ref|NM_114988.2| Arabidopsis thaliana unknown protein AT3G51290 mRNA, complete cds
          Length = 1941

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  tgttcttcctcctcctccgc 77
           ||||||||||||||||||||
Sbjct: 306 tgttcttcctcctcctccgc 325
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>ref|XM_509007.1| PREDICTED: Pan troglodytes similar to REST/NRSF-interacting lim
            domain protein (LOC451838), mRNA
          Length = 3852

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   ggtgttcttcctcctcctcc 75
            ||||||||||||||||||||
Sbjct: 3641 ggtgttcttcctcctcctcc 3660
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>ref|NM_153026.1| Homo sapiens prickle-like 1 (Drosophila) (PRICKLE1), mRNA
          Length = 3293

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   ggtgttcttcctcctcctcc 75
            ||||||||||||||||||||
Sbjct: 2545 ggtgttcttcctcctcctcc 2564
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 56       ggtgttcttcctcctcctcc 75
                ||||||||||||||||||||
Sbjct: 17187565 ggtgttcttcctcctcctcc 17187546



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 56       ggtgttcttcctcctcctcc 75
                ||||||||||||||||||||
Sbjct: 17175130 ggtgttcttcctcctcctcc 17175111
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>gb|AC163353.3| Mus musculus BAC clone RP23-55G7 from chromosome 6, complete sequence
          Length = 264135

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 177    cttccagccactcttgcttggcatttca 204
              ||||||| |||||||||||||| |||||
Sbjct: 254987 cttccagtcactcttgcttggcctttca 254960
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>gb|AF399844.1| Homo sapiens REST/NRSF-interacting lim domain protein (RILP) mRNA,
            complete cds
          Length = 3312

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   ggtgttcttcctcctcctcc 75
            ||||||||||||||||||||
Sbjct: 2545 ggtgttcttcctcctcctcc 2564
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>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete
             sequence
          Length = 115326

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ggtgttcttcctcctcctcc 75
             ||||||||||||||||||||
Sbjct: 20309 ggtgttcttcctcctcctcc 20290



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   ggtgttcttcctcctcctcc 75
            ||||||||||||||||||||
Sbjct: 7874 ggtgttcttcctcctcctcc 7855
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>gb|AC137825.26| Medicago truncatula clone mth2-23j1, complete sequence
          Length = 130938

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   tggcatttcatcaaacacct 214
             ||||||||||||||||||||
Sbjct: 30537 tggcatttcatcaaacacct 30556
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>emb|AL356433.19| Human DNA sequence from clone RP11-453F1 on chromosome 10 Contains three
              CpG islands, complete sequence
          Length = 159810

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 52     ggaaggtgttcttcctcctcctcc 75
              |||||| |||||||||||||||||
Sbjct: 105693 ggaaggagttcttcctcctcctcc 105716
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>gb|BC042722.1| Homo sapiens prickle-like 1 (Drosophila), mRNA (cDNA clone
           IMAGE:4827577)
          Length = 2791

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  ggtgttcttcctcctcctcc 75
           ||||||||||||||||||||
Sbjct: 656 ggtgttcttcctcctcctcc 637
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>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
             sequence
          Length = 153247

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ggtgttcttcctcctcctcc 75
             ||||||||||||||||||||
Sbjct: 78958 ggtgttcttcctcctcctcc 78939



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ggtgttcttcctcctcctcc 75
             ||||||||||||||||||||
Sbjct: 66523 ggtgttcttcctcctcctcc 66504
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>emb|AL132980.3|ATF24M12 Arabidopsis thaliana DNA chromosome 3, BAC clone F24M12
          Length = 129516

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    tgttcttcctcctcctccgc 77
             ||||||||||||||||||||
Sbjct: 99610 tgttcttcctcctcctccgc 99629
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>gb|AC079601.25| Homo sapiens 12 BAC RP11-328C8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 96201

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    ggtgttcttcctcctcctcc 75
             ||||||||||||||||||||
Sbjct: 26531 ggtgttcttcctcctcctcc 26550
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>dbj|AK122877.1| Homo sapiens cDNA FLJ16519 fis, clone NT2RI3007684, moderately
            similar to LIM-ONLY PROTEIN 6
          Length = 3325

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   ggtgttcttcctcctcctcc 75
            ||||||||||||||||||||
Sbjct: 2573 ggtgttcttcctcctcctcc 2592
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>dbj|AK056499.1| Homo sapiens cDNA FLJ31937 fis, clone NT2RP7006527, moderately
            similar to LIM-ONLY PROTEIN 6
          Length = 3293

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   ggtgttcttcctcctcctcc 75
            ||||||||||||||||||||
Sbjct: 2545 ggtgttcttcctcctcctcc 2564
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>dbj|AK056189.1| Homo sapiens cDNA FLJ31627 fis, clone NT2RI2003338
          Length = 1914

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   ggtgttcttcctcctcctcc 75
            ||||||||||||||||||||
Sbjct: 1163 ggtgttcttcctcctcctcc 1182
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>gb|AF149806.1| Oryza sativa hypothetical protein, fertilin alpha subunit, membrane
             protein homolog, and Myb-related protein genes, complete
             cds; and unknown gene
          Length = 33178

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    tcttcctcctcctccgctct 80
             ||||||||||||||||||||
Sbjct: 18623 tcttcctcctcctccgctct 18604
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>gb|AC011260.8| Homo sapiens, clone RP11-1E21, complete sequence
          Length = 168476

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    tggaaggtgttcttcctcct 70
             ||||||||||||||||||||
Sbjct: 73097 tggaaggtgttcttcctcct 73116
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>gb|AC092135.4| Homo sapiens chromosome 16 clone RP11-274A11, complete sequence
          Length = 185193

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    tcttcctcctcctccgctct 80
             ||||||||||||||||||||
Sbjct: 41838 tcttcctcctcctccgctct 41819
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 56       ggtgttcttcctcctcctcc 75
                ||||||||||||||||||||
Sbjct: 17181134 ggtgttcttcctcctcctcc 17181115



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 56       ggtgttcttcctcctcctcc 75
                ||||||||||||||||||||
Sbjct: 17168699 ggtgttcttcctcctcctcc 17168680
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>gb|AC099480.5| Homo sapiens chromosome 16 clone CTB-159O23, complete sequence
          Length = 146500

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    tcttcctcctcctccgctct 80
             ||||||||||||||||||||
Sbjct: 98036 tcttcctcctcctccgctct 98017
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>emb|BX824890.1|CNS0A7UL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH80ZB05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2351

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  tgttcttcctcctcctccgc 77
           ||||||||||||||||||||
Sbjct: 562 tgttcttcctcctcctccgc 581
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>gb|AC016776.6| Homo sapiens BAC clone RP11-574K22 from 2, complete sequence
          Length = 197425

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   ggaggttcctgggcactggc 244
             ||||||||||||||||||||
Sbjct: 78032 ggaggttcctgggcactggc 78051
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>gb|AC016751.7| Homo sapiens BAC clone RP11-504O20 from 2, complete sequence
          Length = 176379

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    ggtgattcaggaaagcttca 339
              ||||||||||||||||||||
Sbjct: 163339 ggtgattcaggaaagcttca 163358
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>ref|XM_343855.2| PREDICTED: Rattus norvegicus similar to RUN domain containing 2A
            (LOC363536), mRNA
          Length = 2640

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 60   ttcttcctcctcctccgctc 79
            ||||||||||||||||||||
Sbjct: 2300 ttcttcctcctcctccgctc 2281
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>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0644B06
          Length = 194509

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     tcttcctcctcctccgctct 80
              ||||||||||||||||||||
Sbjct: 103045 tcttcctcctcctccgctct 103026
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>emb|BX005213.15| Mouse DNA sequence from clone RP23-412I2 on chromosome X, complete
             sequence
          Length = 96535

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ctgccctccagggcatctcc 394
             ||||||||||||||||||||
Sbjct: 81943 ctgccctccagggcatctcc 81924
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>gb|AC127328.6| Mus musculus BAC clone RP23-259B8 from 6, complete sequence
          Length = 186950

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 177   cttccagccactcttgcttggcatttca 204
             ||||||| |||||||||||||| |||||
Sbjct: 48385 cttccagtcactcttgcttggcctttca 48358


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,843,819
Number of Sequences: 3902068
Number of extensions: 3843819
Number of successful extensions: 137902
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137333
Number of HSP's gapped (non-prelim): 569
length of query: 395
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 373
effective length of database: 17,147,199,772
effective search space: 6395905514956
effective search space used: 6395905514956
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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