ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal28a23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
2ref|NM_187477.1| Oryza sativa (japonica cultivar-group), predic... 139 1e-29
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 96 1e-16
4gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
5gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
7ref|XM_459397.1| Debaryomyces hansenii CBS767 hypothetical prote... 48 0.030
8gb|AF424737.1| Mus musculus carcinoma associated protein-like pr... 48 0.030
9emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 48 0.030
10ref|NM_027760.1| Mus musculus Ras association (RalGDS/AF-6) doma... 48 0.030
11gb|AC136297.6| Homo sapiens chromosome 11, clone CTD-2245O6, com... 46 0.12
12gb|AC091196.6| Homo sapiens chromosome 11, clone RP11-371C18, co... 46 0.12
13ref|NM_185433.2| Oryza sativa (japonica cultivar-group), mRNA 44 0.47
14dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
15dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
16dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
17dbj|AK070995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.47
18emb|AL161668.6|CNS01RHB Human chromosome 14 DNA sequence BAC R-9... 44 0.47
19emb|AL355922.4|CNS05TD4 Human chromosome 14 DNA sequence BAC R-8... 44 0.47
20dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 42 1.8
21gb|AC157996.2| Mus musculus BAC clone RP24-194J17 from chromosom... 42 1.8
22gb|AC157086.2| Mus musculus BAC clone RP24-79B18 from chromosome... 42 1.8
23dbj|AB164633.1| Streptomyces griseus AdBS4 gene cluster (orfA-Ad... 42 1.8
24gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 42 1.8
25gb|AC145808.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
26gb|BC044853.1| Mus musculus SEC14 and spectrin domains 1, mRNA (... 40 7.3
27ref|NM_175465.2| Mus musculus SEC14 and spectrin domains 1 (Sest... 40 7.3
28ref|XR_004117.1| PREDICTED: Mus musculus similar to SEC14 and sp... 40 7.3
29gb|BC013245.1| Mus musculus SEC14 and spectrin domains 1, mRNA (... 40 7.3
30gb|AC134434.4| Mus musculus BAC clone RP24-420E8 from chromosome... 40 7.3
31gb|DQ483294.1| Gymnogyps californianus clone 186A microsatellite... 40 7.3
32gb|DQ483281.1| Gymnogyps californianus clone 173A microsatellite... 40 7.3
33gb|DQ483183.1| Gymnogyps californianus clone 75A microsatellite ... 40 7.3
34gb|DQ483177.1| Gymnogyps californianus clone 69A microsatellite ... 40 7.3
35gb|AC129325.4| Mus musculus BAC clone RP23-255J24 from 1, comple... 40 7.3
36gb|AC116571.5| Mus musculus BAC clone RP23-97B18 from 6, complet... 40 7.3
37gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 40 7.3
38gb|AC009222.4| Homo sapiens chromosome 17, clone RP11-429O1, com... 40 7.3
39dbj|AK031980.1| Mus musculus adult male medulla oblongata cDNA, ... 40 7.3
40gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.3
41dbj|AK047939.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 7.3
42dbj|AK017214.1| Mus musculus 10 days neonate intestine cDNA, RIK... 40 7.3
43dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
44dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
45gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosom... 40 7.3
46dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
47dbj|AK073557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
48gb|AC153653.4| Mus musculus BAC clone RP23-454L5 from 1, complet... 40 7.3
49emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-8... 40 7.3
50gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
51emb|AL772359.8| Mouse DNA sequence from clone RP23-305E10 on chr... 40 7.3
52gb|U15969.1|BTU15969 Bos taurus (hst) gene, complete cds 40 7.3
53gb|AC155340.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 40 7.3
54emb|AL772242.7| Mouse DNA sequence from clone RP23-15E4 on chrom... 40 7.3 
>dbj|AK065357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022G07, full
           insert sequence
          Length = 1645

 Score =  188 bits (95), Expect = 1e-44
 Identities = 248/299 (82%)
 Strand = Plus / Plus

                                                                       
Query: 229 ctggaggagatccggcagaagagggcggccgagaggatgcagcagcagcaaacgcccgcc 288
           ||||||||||||||||||||||| || ||||||||||||||||||||||| |  || |||
Sbjct: 187 ctggaggagatccggcagaagagagccgccgagaggatgcagcagcagcacaacccggcc 246

                                                                       
Query: 289 gcgaccgcgtcccacggcgaccctcacgggaaccaaagagccgcggcagagctccttgct 348
           ||  | |||||||  | ||||||| ||||||||| | ||||||  || ||||| |||| |
Sbjct: 247 gccgcggcgtcccttgtcgacccttacgggaacccaggagccggagctgagcttcttggt 306

                                                                       
Query: 349 cgagttcaacaacttgagaatgggaacttggaattggagagggaaaaccaaatgctgatg 408
           ||||||  | ||||||| ||||||||| | | ||||||||||||||||||||||||| | 
Sbjct: 307 cgagttagagaacttgaaaatgggaacatagcattggagagggaaaaccaaatgctgtta 366

                                                                       
Query: 409 tccaagtttgctgagaaggaagttgaaaaggattccctggttagccgattaaatgacctc 468
           |||||| |||||||||||||||| || ||||||||||| |||| ||| || || ||||| 
Sbjct: 367 tccaagattgctgagaaggaagtcgagaaggattccctcgttaaccgcttgaacgacctt 426

                                                                      
Query: 469 gagaaaaatgtagtgccctcgttgaagaagtctctaaatgacatctcactggagaaaga 527
           |||   ||| |||| ||||| ||||| ||| || | |||||||| ||  ||||||||||
Sbjct: 427 gagcggaatatagtaccctccttgaaaaaggctgtgaatgacatttctttggagaaaga 485
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>ref|NM_187477.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1239

 Score =  139 bits (70), Expect = 1e-29
 Identities = 157/186 (84%)
 Strand = Plus / Plus

                                                                       
Query: 229 ctggaggagatccggcagaagagggcggccgagaggatgcagcagcagcaaacgcccgcc 288
           ||||||||||||||||||||||| || ||||||||||||||||||||||| |  || |||
Sbjct: 37  ctggaggagatccggcagaagagagccgccgagaggatgcagcagcagcacaacccggcc 96

                                                                       
Query: 289 gcgaccgcgtcccacggcgaccctcacgggaaccaaagagccgcggcagagctccttgct 348
           ||  | |||||||  | ||||||| ||||||||| | ||||||  || ||||| |||| |
Sbjct: 97  gccgcggcgtcccttgtcgacccttacgggaacccaggagccggagctgagcttcttggt 156

                                                                       
Query: 349 cgagttcaacaacttgagaatgggaacttggaattggagagggaaaaccaaatgctgatg 408
           ||||||  | ||||||| ||||||||| | | ||||||||||||||||||||||||| | 
Sbjct: 157 cgagttagagaacttgaaaatgggaacatagcattggagagggaaaaccaaatgctgtta 216

                 
Query: 409 tccaag 414
           ||||||
Sbjct: 217 tccaag 222
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 54/56 (96%)
 Strand = Plus / Minus

                                                                       
Query: 223     tggcagctggaggagatccggcagaagagggcggccgagaggatgcagcagcagca 278
               ||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 8867439 tggcagctggaggagatccggcagaagagagccgccgagaggatgcagcagcagca 8867384



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                           
Query: 338     agctccttgctcgagttcaacaacttgagaatgggaacttggaattggagagggaaaacc 397
               |||| |||| |||||||  | ||||||| ||||||||| | | |||||||||||||||||
Sbjct: 8867124 agcttcttggtcgagttagagaacttgaaaatgggaacatagcattggagagggaaaacc 8867065

                                
Query: 398     aaatgctgatgtccaag 414
               |||||||| | ||||||
Sbjct: 8867064 aaatgctgttatccaag 8867048



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 416     ttgctgagaaggaagttgaaaaggattccctggtta 451
               |||||||||||||||| || ||||||||||| ||||
Sbjct: 8866964 ttgctgagaaggaagtcgagaaggattccctcgtta 8866929
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>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02,
             complete sequence
          Length = 126027

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 54/56 (96%)
 Strand = Plus / Minus

                                                                     
Query: 223   tggcagctggaggagatccggcagaagagggcggccgagaggatgcagcagcagca 278
             ||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 58327 tggcagctggaggagatccggcagaagagagccgccgagaggatgcagcagcagca 58272



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                         
Query: 338   agctccttgctcgagttcaacaacttgagaatgggaacttggaattggagagggaaaacc 397
             |||| |||| |||||||  | ||||||| ||||||||| | | |||||||||||||||||
Sbjct: 58012 agcttcttggtcgagttagagaacttgaaaatgggaacatagcattggagagggaaaacc 57953

                              
Query: 398   aaatgctgatgtccaag 414
             |||||||| | ||||||
Sbjct: 57952 aaatgctgttatccaag 57936



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 416   ttgctgagaaggaagttgaaaaggattccctggtta 451
             |||||||||||||||| || ||||||||||| ||||
Sbjct: 57852 ttgctgagaaggaagtcgagaaggattccctcgtta 57817
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>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02,
              complete sequence
          Length = 112265

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 54/56 (96%)
 Strand = Plus / Minus

                                                                      
Query: 223    tggcagctggaggagatccggcagaagagggcggccgagaggatgcagcagcagca 278
              ||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 110592 tggcagctggaggagatccggcagaagagagccgccgagaggatgcagcagcagca 110537



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                          
Query: 338    agctccttgctcgagttcaacaacttgagaatgggaacttggaattggagagggaaaacc 397
              |||| |||| |||||||  | ||||||| ||||||||| | | |||||||||||||||||
Sbjct: 110277 agcttcttggtcgagttagagaacttgaaaatgggaacatagcattggagagggaaaacc 110218

                               
Query: 398    aaatgctgatgtccaag 414
              |||||||| | ||||||
Sbjct: 110217 aaatgctgttatccaag 110201



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 416    ttgctgagaaggaagttgaaaaggattccctggtta 451
              |||||||||||||||| || ||||||||||| ||||
Sbjct: 110117 ttgctgagaaggaagtcgagaaggattccctcgtta 110082
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 54/56 (96%)
 Strand = Plus / Minus

                                                                       
Query: 223     tggcagctggaggagatccggcagaagagggcggccgagaggatgcagcagcagca 278
               ||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 8865274 tggcagctggaggagatccggcagaagagagccgccgagaggatgcagcagcagca 8865219



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                           
Query: 338     agctccttgctcgagttcaacaacttgagaatgggaacttggaattggagagggaaaacc 397
               |||| |||| |||||||  | ||||||| ||||||||| | | |||||||||||||||||
Sbjct: 8864959 agcttcttggtcgagttagagaacttgaaaatgggaacatagcattggagagggaaaacc 8864900

                                
Query: 398     aaatgctgatgtccaag 414
               |||||||| | ||||||
Sbjct: 8864899 aaatgctgttatccaag 8864883



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 416     ttgctgagaaggaagttgaaaaggattccctggtta 451
               |||||||||||||||| || ||||||||||| ||||
Sbjct: 8864799 ttgctgagaaggaagtcgagaaggattccctcgtta 8864764
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>ref|XM_459397.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E02156g)
            partial mRNA
          Length = 6672

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 120  tttaactttctttccttttctgga 143
            ||||||||||||||||||||||||
Sbjct: 1376 tttaactttctttccttttctgga 1353
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>gb|AF424737.1| Mus musculus carcinoma associated protein-like protein (Hoj1) mRNA,
           complete cds
          Length = 1733

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 226 cagctggaggagatccggcagaag 249
           ||||||||||||||||||||||||
Sbjct: 804 cagctggaggagatccggcagaag 827
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>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
              hansenii
          Length = 2037969

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 120    tttaactttctttccttttctgga 143
              ||||||||||||||||||||||||
Sbjct: 145931 tttaactttctttccttttctgga 145954
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>ref|NM_027760.1| Mus musculus Ras association (RalGDS/AF-6) domain family 8
           (Rassf8), mRNA
          Length = 1733

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 226 cagctggaggagatccggcagaag 249
           ||||||||||||||||||||||||
Sbjct: 804 cagctggaggagatccggcagaag 827
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>gb|AC136297.6| Homo sapiens chromosome 11, clone CTD-2245O6, complete sequence
          Length = 185908

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 124   actttctttccttttctggaggc 146
             |||||||||||||||||||||||
Sbjct: 23005 actttctttccttttctggaggc 22983
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>gb|AC091196.6| Homo sapiens chromosome 11, clone RP11-371C18, complete sequence
          Length = 132211

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 124   actttctttccttttctggaggc 146
             |||||||||||||||||||||||
Sbjct: 38367 actttctttccttttctggaggc 38389
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>ref|NM_185433.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 906

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 240 ccggcagaagagggcggccgag 261
           ||||||||||||||||||||||
Sbjct: 659 ccggcagaagagggcggccgag 680
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 240    ccggcagaagagggcggccgag 261
              ||||||||||||||||||||||
Sbjct: 866773 ccggcagaagagggcggccgag 866752
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>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0541H01
          Length = 157519

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 240    ccggcagaagagggcggccgag 261
              ||||||||||||||||||||||
Sbjct: 149907 ccggcagaagagggcggccgag 149886
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>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0019F11
          Length = 123673

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 240   ccggcagaagagggcggccgag 261
             ||||||||||||||||||||||
Sbjct: 47668 ccggcagaagagggcggccgag 47647
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>dbj|AK070995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078L22, full
           insert sequence
          Length = 906

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 240 ccggcagaagagggcggccgag 261
           ||||||||||||||||||||||
Sbjct: 659 ccggcagaagagggcggccgag 680
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>emb|AL161668.6|CNS01RHB Human chromosome 14 DNA sequence BAC R-998D10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 203363

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 117   gcttttaactttctttcctttt 138
             ||||||||||||||||||||||
Sbjct: 55460 gcttttaactttctttcctttt 55439
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>emb|AL355922.4|CNS05TD4 Human chromosome 14 DNA sequence BAC R-84C10 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 157979

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 117  gcttttaactttctttcctttt 138
            ||||||||||||||||||||||
Sbjct: 1332 gcttttaactttctttcctttt 1353
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 28      ctcccgccccggccgatccat 48
               |||||||||||||||||||||
Sbjct: 1885688 ctcccgccccggccgatccat 1885708
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>gb|AC157996.2| Mus musculus BAC clone RP24-194J17 from chromosome 9, complete sequence
          Length = 158268

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 120    tttaactttctttccttttct 140
              |||||||||||||||||||||
Sbjct: 106399 tttaactttctttccttttct 106419
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>gb|AC157086.2| Mus musculus BAC clone RP24-79B18 from chromosome 9, complete sequence
          Length = 200734

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 120    tttaactttctttccttttct 140
              |||||||||||||||||||||
Sbjct: 185940 tttaactttctttccttttct 185920
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>dbj|AB164633.1| Streptomyces griseus AdBS4 gene cluster (orfA-AdBS4, orf1-AdBS4,
            orf2-AdBS4, orf3-AdBS4), complete and partial cds
          Length = 8426

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 83   gggccgccgcaccgtacgcct 103
            |||||||||||||||||||||
Sbjct: 6737 gggccgccgcaccgtacgcct 6757
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 28      ctcccgccccggccgatccat 48
               |||||||||||||||||||||
Sbjct: 2431339 ctcccgccccggccgatccat 2431319
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>gb|AC145808.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0057F07 map near 50283S, complete sequence
          Length = 139827

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   cgcccgccgcgaccgcgtcc 300
             ||||||||||||||||||||
Sbjct: 84807 cgcccgccgcgaccgcgtcc 84788
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>gb|BC044853.1| Mus musculus SEC14 and spectrin domains 1, mRNA (cDNA clone
           MGC:51459 IMAGE:3978465), complete cds
          Length = 2732

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 226 cagctggaggagatccggcagaag 249
           |||||||||||||||| |||||||
Sbjct: 870 cagctggaggagatccagcagaag 893
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>ref|NM_175465.2| Mus musculus SEC14 and spectrin domains 1 (Sestd1), mRNA
          Length = 2732

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 226 cagctggaggagatccggcagaag 249
           |||||||||||||||| |||||||
Sbjct: 870 cagctggaggagatccagcagaag 893
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>ref|XR_004117.1| PREDICTED: Mus musculus similar to SEC14 and spectrin domains 1
           (LOC627892), mRNA
          Length = 896

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 226 cagctggaggagatccggcagaag 249
           |||||||||||||||| |||||||
Sbjct: 304 cagctggaggagatccagcagaag 327
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>gb|BC013245.1| Mus musculus SEC14 and spectrin domains 1, mRNA (cDNA clone
           IMAGE:3588319)
          Length = 2860

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 226 cagctggaggagatccggcagaag 249
           |||||||||||||||| |||||||
Sbjct: 951 cagctggaggagatccagcagaag 974
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>gb|AC134434.4| Mus musculus BAC clone RP24-420E8 from chromosome 7, complete sequence
          Length = 214856

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 226    cagctggaggagatccggcagaag 249
              |||||||||||||||| |||||||
Sbjct: 167215 cagctggaggagatccagcagaag 167238
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>gb|DQ483294.1| Gymnogyps californianus clone 186A microsatellite sequence
          Length = 674

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 260 agaggatgcagcagcagcaa 279
           ||||||||||||||||||||
Sbjct: 472 agaggatgcagcagcagcaa 453
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>gb|DQ483281.1| Gymnogyps californianus clone 173A microsatellite sequence
          Length = 580

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 agaggatgcagcagcagcaa 279
           ||||||||||||||||||||
Sbjct: 117 agaggatgcagcagcagcaa 136
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>gb|DQ483183.1| Gymnogyps californianus clone 75A microsatellite sequence
          Length = 588

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 260 agaggatgcagcagcagcaa 279
           ||||||||||||||||||||
Sbjct: 472 agaggatgcagcagcagcaa 453
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>gb|DQ483177.1| Gymnogyps californianus clone 69A microsatellite sequence
          Length = 576

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 260 agaggatgcagcagcagcaa 279
           ||||||||||||||||||||
Sbjct: 460 agaggatgcagcagcagcaa 441
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>gb|AC129325.4| Mus musculus BAC clone RP23-255J24 from 1, complete sequence
          Length = 194106

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   ttttaactttctttcctttt 138
             ||||||||||||||||||||
Sbjct: 85974 ttttaactttctttcctttt 85993
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>gb|AC116571.5| Mus musculus BAC clone RP23-97B18 from 6, complete sequence
          Length = 113258

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 226    cagctggaggagatccggcagaag 249
              |||||||||||||| |||||||||
Sbjct: 105375 cagctggaggagatacggcagaag 105398
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>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 174     ttcgcccgtcagcttctgat 193
               ||||||||||||||||||||
Sbjct: 2493266 ttcgcccgtcagcttctgat 2493285
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>gb|AC009222.4| Homo sapiens chromosome 17, clone RP11-429O1, complete sequence
          Length = 184304

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    atgggaacttggaattggag 387
              ||||||||||||||||||||
Sbjct: 133606 atgggaacttggaattggag 133587
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>dbj|AK031980.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330521L19 product:hypothetical
           protein, full insert sequence
          Length = 1305

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 226 cagctggaggagatccggcagaag 249
           |||||||||||||| |||||||||
Sbjct: 110 cagctggaggagatacggcagaag 133
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 280     acgcccgccgcgaccgcgtc 299
               ||||||||||||||||||||
Sbjct: 1272286 acgcccgccgcgaccgcgtc 1272305
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>dbj|AK047939.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130022N23 product:hypothetical Cellular
           retinaldehyde-binding protein (CRAL)/Triple function
           domain (TRIO) containing protein, full insert sequence
          Length = 1891

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 226 cagctggaggagatccggcagaag 249
           |||||||||||||||| |||||||
Sbjct: 868 cagctggaggagatccagcagaag 891
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>dbj|AK017214.1| Mus musculus 10 days neonate intestine cDNA, RIKEN full-length
           enriched library, clone:5133400D11 product:RIKEN cDNA
           5133400D11 gene, full insert sequence
          Length = 1140

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 226 cagctggaggagatccggcagaag 249
           |||||||||||||| |||||||||
Sbjct: 211 cagctggaggagatacggcagaag 234
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 281      cgcccgccgcgaccgcgtcc 300
                ||||||||||||||||||||
Sbjct: 14161487 cgcccgccgcgaccgcgtcc 14161506
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 119     ttttaactttctttcctttt 138
               ||||||||||||||||||||
Sbjct: 4882376 ttttaactttctttcctttt 4882357
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>gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosome 6, complete sequence
          Length = 230020

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 226    cagctggaggagatccggcagaag 249
              |||||||||||||| |||||||||
Sbjct: 193610 cagctggaggagatacggcagaag 193633
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>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1012G11
          Length = 167168

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   ttttaactttctttcctttt 138
             ||||||||||||||||||||
Sbjct: 64908 ttttaactttctttcctttt 64889
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>dbj|AK073557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046C19, full
            insert sequence
          Length = 2846

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 281  cgcccgccgcgaccgcgtcc 300
            ||||||||||||||||||||
Sbjct: 1815 cgcccgccgcgaccgcgtcc 1834
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>gb|AC153653.4| Mus musculus BAC clone RP23-454L5 from 1, complete sequence
          Length = 180403

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    ttttaactttctttcctttt 138
              ||||||||||||||||||||
Sbjct: 132065 ttttaactttctttcctttt 132046
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>emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-872J21 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188020

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    gcttttaactttctttcctt 136
              ||||||||||||||||||||
Sbjct: 136604 gcttttaactttctttcctt 136623
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 281      cgcccgccgcgaccgcgtcc 300
                ||||||||||||||||||||
Sbjct: 14243489 cgcccgccgcgaccgcgtcc 14243508
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>emb|AL772359.8| Mouse DNA sequence from clone RP23-305E10 on chromosome 11, complete
             sequence
          Length = 105736

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   ttttaactttctttcctttt 138
             ||||||||||||||||||||
Sbjct: 39767 ttttaactttctttcctttt 39748
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>gb|U15969.1|BTU15969 Bos taurus (hst) gene, complete cds
          Length = 2250

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 137 ttctggaggcgggaggcggctcag 160
           ||||| ||||||||||||||||||
Sbjct: 583 ttctgaaggcgggaggcggctcag 560
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>gb|AC155340.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH020D15, complete sequence
          Length = 143633

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   taactttctttccttttctg 141
             ||||||||||||||||||||
Sbjct: 57556 taactttctttccttttctg 57575
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>emb|AL772242.7| Mouse DNA sequence from clone RP23-15E4 on chromosome 2, complete
             sequence
          Length = 196548

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 226   cagctggaggagatccggcagaag 249
             |||||||||||||||| |||||||
Sbjct: 74489 cagctggaggagatccagcagaag 74512


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,387,008
Number of Sequences: 3902068
Number of extensions: 5387008
Number of successful extensions: 124761
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124189
Number of HSP's gapped (non-prelim): 570
length of query: 537
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 514
effective length of database: 17,143,297,704
effective search space: 8811655019856
effective search space used: 8811655019856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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