ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal27l16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 886 bits (447), Expect = 0.0 Identities = 460/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 2 cgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3752 cgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcgg 3811 Query: 62 cgagatcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccac 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3812 cgagatcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccac 3871 Query: 122 gttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3872 gttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtcca 3931 Query: 182 ggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3932 ggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgct 3991 Query: 242 cggccaagccaacgacgacgccatgaagaccggtgccttctacggcaagtagaaggtcct 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3992 cggccaagccaacgacgacgccatgaagaccggtgccttctacggcaagtagaaggtcct 4051 Query: 302 actctacttaagatgcatgcatgcactatatatatgttggactattttggacccgaaatc 361 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4052 actctacttaagatcgatgcatgcactatatatatgttggactattttggacccgaaatc 4111 Query: 362 cactcaaactttttgattcatcgccgcacaggtaacccaattgtaagtctcttcttgaaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4112 cactcaaactttttgattcatcgccgcacaggtaacccaattgtaagtctcttcttgaaa 4171 Query: 422 gagaaaggaattgtatatgttcttaaatcgtcattttccgctt 464 ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4172 gag-aaggaattgtatatgttcttaaatcgtcattttccgctt 4213 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 123 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 182 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 7141 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 7200 Query: 183 gagcaggagaacgtcaagcgtgtgcagct 211 |||||||| || ||||||||||||||||| Sbjct: 7201 gagcaggacaatgtcaagcgtgtgcagct 7229 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 3 gacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggc 62 ||||| ||||| || ||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 7021 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 7080
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 886 bits (447), Expect = 0.0 Identities = 460/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 2 cgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1183 cgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcgg 1242 Query: 62 cgagatcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccac 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1243 cgagatcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccac 1302 Query: 122 gttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1303 gttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtcca 1362 Query: 182 ggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1363 ggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgct 1422 Query: 242 cggccaagccaacgacgacgccatgaagaccggtgccttctacggcaagtagaaggtcct 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1423 cggccaagccaacgacgacgccatgaagaccggtgccttctacggcaagtagaaggtcct 1482 Query: 302 actctacttaagatgcatgcatgcactatatatatgttggactattttggacccgaaatc 361 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1483 actctacttaagatcgatgcatgcactatatatatgttggactattttggacccgaaatc 1542 Query: 362 cactcaaactttttgattcatcgccgcacaggtaacccaattgtaagtctcttcttgaaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1543 cactcaaactttttgattcatcgccgcacaggtaacccaattgtaagtctcttcttgaaa 1602 Query: 422 gagaaaggaattgtatatgttcttaaatcgtcattttccgctt 464 ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1603 gag-aaggaattgtatatgttcttaaatcgtcattttccgctt 1644
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 646 bits (326), Expect = 0.0 Identities = 419/449 (93%), Gaps = 12/449 (2%) Strand = Plus / Plus Query: 2 cgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcgg 61 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1033 cgacttcttcggcgcgctgcgggcgcgggtgtacgacgacgaggtgcgcaagtgggtcgg 1092 Query: 62 cgagatcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccac 121 |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1093 cgagatcggcgtcgagaacatctccaagcggctcgtcaactccagggaggggccgccgac 1152 Query: 122 gttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtcca 181 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1153 gttcgaccagcccaagatgaccatcgagaagctcatggagtacggccacatgctggtcca 1212 Query: 182 ggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgct 241 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1213 ggagcaggagaacgtgaagcgcgtgcagctcgccgacaagtacctcagcgaggcggcgct 1272 Query: 242 cggccaagccaacgacgacgccatgaagaccggtgccttctacggcaagtagaaggtcct 301 ||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||| Sbjct: 1273 cggccaagccaacgacgacgccatggcgaccggcgccttctacggcaagtagaaagtcct 1332 Query: 302 actctacttaaga--------tgcatgcatgcactatatatatgttggactattttggac 353 | ||||||||| ||||||||||||||||||||||| |||| |||||||||| Sbjct: 1333 a---tacttaagatgcatgcgtgcatgcatgcactatatatatgctggaatattttggac 1389 Query: 354 ccgaaatccactcaaactttttgattcatcgccgcacaggtaacccaattgtaagtctct 413 || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1390 tcg-aatccactcaaactttttgattcatcgccgcacaggtagcccaattgtaagtctct 1448 Query: 414 tcttgaaagagaaaggaattgtatatgtt 442 ||||||||||||| ||||||||||||| Sbjct: 1449 tcttgaaagagaatccaattgtatatgtt 1477
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 250 bits (126), Expect = 4e-63 Identities = 234/270 (86%) Strand = Plus / Plus Query: 2 cgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcgg 61 ||||||||||||||||||||| || ||||| |||||||||||||| || |||||| | Sbjct: 639 cgacttcttcggcgcgctgcgtgcccgggtctacgacgacgaggtccgacggtgggtgag 698 Query: 62 cgagatcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccac 121 ||||| |||||| ||||||||| ||| | ||||||||||||| |||||| |||||||| Sbjct: 699 cgagaccggcgtcgagaacatcgccaggaagctcgtcaactccaaggagggcccgcccac 758 Query: 122 gttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtcca 181 |||||| ||||||||||| || || ||||||||| |||||||||| ||||||||||| Sbjct: 759 gttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggc 818 Query: 182 ggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgct 241 |||||||||||||||||||||||||||||| || ||||||||||||| |||||| || || Sbjct: 819 ggagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctct 878 Query: 242 cggccaagccaacgacgacgccatgaagac 271 || |||||||||| |||||||||||||| Sbjct: 879 tggtgaagccaacgaggacgccatgaagac 908
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 242 bits (122), Expect = 9e-61 Identities = 230/266 (86%) Strand = Plus / Plus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||||||||| || ||||| |||||||||||||| || |||||| ||||| Sbjct: 1038 ttcttcggcgcgctgcgtgcccgggtctacgacgacgaggtccgacggtgggtgagcgag 1097 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | |||||| ||||||||| ||| | ||||||||||||| |||||| |||||||||||| Sbjct: 1098 accggcgtcgagaacatcgccaggaagctcgtcaactccaaggagggcccgcccacgttc 1157 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || ||||||||||| || || ||||||||| |||||||||| ||||||||||| |||| Sbjct: 1158 gagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcggag 1217 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || ||||||||||||| |||||| || || || Sbjct: 1218 caggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctcttggt 1277 Query: 246 caagccaacgacgacgccatgaagac 271 |||||||||| |||||||||||||| Sbjct: 1278 gaagccaacgaggacgccatgaagac 1303
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 226 bits (114), Expect = 5e-56 Identities = 228/266 (85%) Strand = Plus / Plus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||||||||| || ||| |||||||||||||| || |||||| ||||| Sbjct: 1038 ttcttcggcgcgctgcgtgccacggtctacgacgacgaggtccgacggtgggtgagcgag 1097 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | |||||| ||||||||| ||| | ||||||||||||| |||||| |||||||||||| Sbjct: 1098 accggcgtcgagaacatcgccaggaagctcgtcaactccaaggagggcccgcccacgttc 1157 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || ||||||||||| || || ||||||||| |||||||||| ||||||||||| |||| Sbjct: 1158 gagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcggag 1217 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || ||||||||||||| |||||| || || || Sbjct: 1218 caggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctcttggt 1277 Query: 246 caagccaacgacgacgccatgaagac 271 |||||||||| |||||||||||||| Sbjct: 1278 gaagccaacgaggacgccatgaagac 1303
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 137 bits (69), Expect = 4e-29 Identities = 228/281 (81%) Strand = Plus / Minus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||| || || || || || |||||||||||||||||||||||||| || Sbjct: 108591 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggtgtcggac 108532 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | || ||||||||||| |||| | || || ||||| |||||||| || || |||| Sbjct: 108531 acgggtgtggagaacattggcaagaggctggtgaactcgagggagggcccaccggagttc 108472 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || |||||||||||||| || || ||||||||||||||||| ||||||| || ||||| Sbjct: 108471 gagcagcccaagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggag 108412 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || || ||||| | |||||||| || || || Sbjct: 108411 caggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggt 108352 Query: 246 caagccaacgacgacgccatgaagaccggtgccttctacgg 286 | || ||| ||||||||||||||| ||| |||||||||| Sbjct: 108351 gacgctaactccgacgccatgaagactggttccttctacgg 108311 Score = 109 bits (55), Expect = 8e-21 Identities = 104/120 (86%), Gaps = 4/120 (3%) Strand = Plus / Minus Query: 129 cagcccaagatgaccatagagaagctcatggagtacggcc----acatgctggtccagga 184 |||||||||||||| || || ||||| ||||||||||| | |||||||||| ||| Sbjct: 112305 cagcccaagatgacgatcgacaagctgatggagtacgggccggcacatgctggtgaggga 112246 Query: 185 gcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcgg 244 |||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||| Sbjct: 112245 gcaggagaacgtcaagagggtgcggctcgccgataagtacctcagcgaggcggcgctcgg 112186 Score = 83.8 bits (42), Expect = 5e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 2 cgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcgg 61 |||||||||||| ||||||||||| |||||||||| |||||||||||| |||||| | Sbjct: 112425 cgacttcttcggggcgctgcgggcgcgggtgtacggcgacgaggtgcggcggtgggtggc 112366 Query: 62 cgagatcggcgtggagaacatc 83 |||||||| |||||||||||| Sbjct: 112365 ggagatcggggtggagaacatc 112344
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 137 bits (69), Expect = 4e-29 Identities = 228/281 (81%) Strand = Plus / Minus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||| || || || || || |||||||||||||||||||||||||| || Sbjct: 30468 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggtgtcggac 30409 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | || ||||||||||| |||| | || || ||||| |||||||| || || |||| Sbjct: 30408 acgggtgtggagaacattggcaagaggctggtgaactcgagggagggcccaccggagttc 30349 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || |||||||||||||| || || ||||||||||||||||| ||||||| || ||||| Sbjct: 30348 gagcagcccaagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggag 30289 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || || ||||| | |||||||| || || || Sbjct: 30288 caggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggt 30229 Query: 246 caagccaacgacgacgccatgaagaccggtgccttctacgg 286 | || ||| ||||||||||||||| ||| |||||||||| Sbjct: 30228 gacgctaactccgacgccatgaagactggttccttctacgg 30188 Score = 109 bits (55), Expect = 8e-21 Identities = 104/120 (86%), Gaps = 4/120 (3%) Strand = Plus / Minus Query: 129 cagcccaagatgaccatagagaagctcatggagtacggcc----acatgctggtccagga 184 |||||||||||||| || || ||||| ||||||||||| | |||||||||| ||| Sbjct: 34182 cagcccaagatgacgatcgacaagctgatggagtacgggccggcacatgctggtgaggga 34123 Query: 185 gcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcgg 244 |||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||| Sbjct: 34122 gcaggagaacgtcaagagggtgcggctcgccgataagtacctcagcgaggcggcgctcgg 34063 Score = 83.8 bits (42), Expect = 5e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 2 cgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcgg 61 |||||||||||| ||||||||||| |||||||||| |||||||||||| |||||| | Sbjct: 34302 cgacttcttcggggcgctgcgggcgcgggtgtacggcgacgaggtgcggcggtgggtggc 34243 Query: 62 cgagatcggcgtggagaacatc 83 |||||||| |||||||||||| Sbjct: 34242 ggagatcggggtggagaacatc 34221
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 137 bits (69), Expect = 4e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||| || || || || || |||||||||||||||||||||||||| || Sbjct: 1029 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggtgtcggac 1088 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | || ||||||||||| |||| | || || ||||| |||||||| || || |||| Sbjct: 1089 acgggtgtggagaacattggcaagaggctggtgaactcgagggagggcccaccggagttc 1148 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || |||||||||||||| || || ||||||||||||||||| ||||||| || ||||| Sbjct: 1149 gagcagcccaagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggag 1208 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || || ||||| | |||||||| || || || Sbjct: 1209 caggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggt 1268 Query: 246 caagccaacgacgacgccatgaagaccggtgccttctacgg 286 | || ||| ||||||||||||||| ||| |||||||||| Sbjct: 1269 gacgctaactccgacgccatgaagactggttccttctacgg 1309
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 137 bits (69), Expect = 4e-29 Identities = 228/281 (81%) Strand = Plus / Minus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||| || || || || || |||||||||||||||||||||||||| || Sbjct: 28303730 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggtgtcggac 28303671 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | || ||||||||||| |||| | || || ||||| |||||||| || || |||| Sbjct: 28303670 acgggtgtggagaacattggcaagaggctggtgaactcgagggagggcccaccggagttc 28303611 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || |||||||||||||| || || ||||||||||||||||| ||||||| || ||||| Sbjct: 28303610 gagcagcccaagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggag 28303551 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || || ||||| | |||||||| || || || Sbjct: 28303550 caggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggt 28303491 Query: 246 caagccaacgacgacgccatgaagaccggtgccttctacgg 286 | || ||| ||||||||||||||| ||| |||||||||| Sbjct: 28303490 gacgctaactccgacgccatgaagactggttccttctacgg 28303450 Score = 109 bits (55), Expect = 8e-21 Identities = 104/120 (86%), Gaps = 4/120 (3%) Strand = Plus / Minus Query: 129 cagcccaagatgaccatagagaagctcatggagtacggcc----acatgctggtccagga 184 |||||||||||||| || || ||||| ||||||||||| | |||||||||| ||| Sbjct: 28307444 cagcccaagatgacgatcgacaagctgatggagtacgggccggcacatgctggtgaggga 28307385 Query: 185 gcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcgg 244 |||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||| Sbjct: 28307384 gcaggagaacgtcaagagggtgcggctcgccgataagtacctcagcgaggcggcgctcgg 28307325 Score = 83.8 bits (42), Expect = 5e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 2 cgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcgg 61 |||||||||||| ||||||||||| |||||||||| |||||||||||| |||||| | Sbjct: 28307564 cgacttcttcggggcgctgcgggcgcgggtgtacggcgacgaggtgcggcggtgggtggc 28307505 Query: 62 cgagatcggcgtggagaacatc 83 |||||||| |||||||||||| Sbjct: 28307504 ggagatcggggtggagaacatc 28307483
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 137 bits (69), Expect = 4e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 107 ggaggggccgcccacgttcgaccagcccaagatgaccatagagaagctcatggagtacgg 166 |||||||||||| ||||||| ||||||||||||||| | || ||||| |||||||||| Sbjct: 824 ggaggggccgccgacgttcgcgcagcccaagatgaccctggacaagctgctggagtacgg 883 Query: 167 ccacatgctggtccaggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacct 226 | |||||||||| ||||||||||||||||| ||| | |||||||| |||||||||||||| Sbjct: 884 caacatgctggtgcaggagcaggagaacgtgaagagggtgcagctggccgacaagtacct 943 Query: 227 cagcgaggc 235 |||||||| Sbjct: 944 gagcgaggc 952 Score = 46.1 bits (23), Expect = 0.10 Identities = 59/71 (83%) Strand = Plus / Plus Query: 3 gacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggc 62 ||||||||||| || ||| |||| |||| ||||||||||||||| | |||||| | | | Sbjct: 720 gacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtggattgcc 779 Query: 63 gagatcggcgt 73 || |||||||| Sbjct: 780 gaaatcggcgt 790
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 137 bits (69), Expect = 4e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 107 ggaggggccgcccacgttcgaccagcccaagatgaccatagagaagctcatggagtacgg 166 |||||||||||| ||||||| ||||||||||||||| | || ||||| |||||||||| Sbjct: 1018 ggaggggccgccgacgttcgcgcagcccaagatgaccctggacaagctgctggagtacgg 1077 Query: 167 ccacatgctggtccaggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacct 226 | |||||||||| ||||||||||||||||| ||| | |||||||| |||||||||||||| Sbjct: 1078 caacatgctggtgcaggagcaggagaacgtgaagagggtgcagctggccgacaagtacct 1137 Query: 227 cagcgaggc 235 |||||||| Sbjct: 1138 gagcgaggc 1146 Score = 46.1 bits (23), Expect = 0.10 Identities = 59/71 (83%) Strand = Plus / Plus Query: 3 gacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggc 62 ||||||||||| || ||| |||| |||| ||||||||||||||| | |||||| | | | Sbjct: 914 gacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtggattgcc 973 Query: 63 gagatcggcgt 73 || |||||||| Sbjct: 974 gaaatcggcgt 984
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 137 bits (69), Expect = 4e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||| || || || || || |||||||||||||||||||||||||| || Sbjct: 1077 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggtgtcggac 1136 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | || ||||||||||| |||| | || || ||||| |||||||| || || |||| Sbjct: 1137 acgggtgtggagaacattggcaagaggctggtgaactcgagggagggcccaccggagttc 1196 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || |||||||||||||| || || ||||||||||||||||| ||||||| || ||||| Sbjct: 1197 gagcagcccaagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggag 1256 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || || ||||| | |||||||| || || || Sbjct: 1257 caggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggt 1316 Query: 246 caagccaacgacgacgccatgaagaccggtgccttctacgg 286 | || ||| ||||||||||||||| ||| |||||||||| Sbjct: 1317 gacgctaactccgacgccatgaagactggttccttctacgg 1357
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 137 bits (69), Expect = 4e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||| || || || || || |||||||||||||||||||||||||| || Sbjct: 1028 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggtgtcggac 1087 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | || ||||||||||| |||| | || || ||||| |||||||| || || |||| Sbjct: 1088 acgggtgtggagaacattggcaagaggctggtgaactcgagggagggcccaccggagttc 1147 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || |||||||||||||| || || ||||||||||||||||| ||||||| || ||||| Sbjct: 1148 gagcagcccaagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggag 1207 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || || ||||| | |||||||| || || || Sbjct: 1208 caggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggt 1267 Query: 246 caagccaacgacgacgccatgaagaccggtgccttctacgg 286 | || ||| ||||||||||||||| ||| |||||||||| Sbjct: 1268 gacgctaactccgacgccatgaagactggttccttctacgg 1308
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 137 bits (69), Expect = 4e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||| || || || || || |||||||||||||||||||||||||| || Sbjct: 1066 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggtgtcggac 1125 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | || ||||||||||| |||| | || || ||||| |||||||| || || |||| Sbjct: 1126 acgggtgtggagaacattggcaagaggctggtgaactcgagggagggcccaccggagttc 1185 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || |||||||||||||| || || ||||||||||||||||| ||||||| || ||||| Sbjct: 1186 gagcagcccaagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggag 1245 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || || ||||| | |||||||| || || || Sbjct: 1246 caggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggt 1305 Query: 246 caagccaacgacgacgccatgaagaccggtgccttctacgg 286 | || ||| ||||||||||||||| ||| |||||||||| Sbjct: 1306 gacgctaactccgacgccatgaagactggttccttctacgg 1346
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 137 bits (69), Expect = 4e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||| || || || || || |||||||||||||||||||||||||| || Sbjct: 1065 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggtgtcggac 1124 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | || ||||||||||| |||| | || || ||||| |||||||| || || |||| Sbjct: 1125 acgggtgtggagaacattggcaagaggctggtgaactcgagggagggcccaccggagttc 1184 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || |||||||||||||| || || ||||||||||||||||| ||||||| || ||||| Sbjct: 1185 gagcagcccaagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggag 1244 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || || ||||| | |||||||| || || || Sbjct: 1245 caggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggt 1304 Query: 246 caagccaacgacgacgccatgaagaccggtgccttctacgg 286 | || ||| ||||||||||||||| ||| |||||||||| Sbjct: 1305 gacgctaactccgacgccatgaagactggttccttctacgg 1345
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 137 bits (69), Expect = 4e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||| || || || || || |||||||||||||||||||||||||| || Sbjct: 849 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggtgtcggac 908 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | || ||||||||||| |||| | || || ||||| |||||||| || || |||| Sbjct: 909 acgggtgtggagaacattggcaagaggctggtgaactcgagggagggcccaccggagttc 968 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || |||||||||||||| || || ||||||||||||||||| ||||||| || ||||| Sbjct: 969 gagcagcccaagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggag 1028 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || || ||||| | |||||||| || || || Sbjct: 1029 caggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggt 1088 Query: 246 caagccaacgacgacgccatgaagaccggtgccttctacgg 286 | || ||| ||||||||||||||| ||| |||||||||| Sbjct: 1089 gacgctaactccgacgccatgaagactggttccttctacgg 1129
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 137 bits (69), Expect = 4e-29 Identities = 228/281 (81%) Strand = Plus / Minus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||| || || || || || |||||||||||||||||||||||||| || Sbjct: 28286179 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggtgtcggac 28286120 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | || ||||||||||| |||| | || || ||||| |||||||| || || |||| Sbjct: 28286119 acgggtgtggagaacattggcaagaggctggtgaactcgagggagggcccaccggagttc 28286060 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || |||||||||||||| || || ||||||||||||||||| ||||||| || ||||| Sbjct: 28286059 gagcagcccaagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggag 28286000 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || || ||||| | |||||||| || || || Sbjct: 28285999 caggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggt 28285940 Query: 246 caagccaacgacgacgccatgaagaccggtgccttctacgg 286 | || ||| ||||||||||||||| ||| |||||||||| Sbjct: 28285939 gacgctaactccgacgccatgaagactggttccttctacgg 28285899 Score = 109 bits (55), Expect = 8e-21 Identities = 104/120 (86%), Gaps = 4/120 (3%) Strand = Plus / Minus Query: 129 cagcccaagatgaccatagagaagctcatggagtacggcc----acatgctggtccagga 184 |||||||||||||| || || ||||| ||||||||||| | |||||||||| ||| Sbjct: 28289893 cagcccaagatgacgatcgacaagctgatggagtacgggccggcacatgctggtgaggga 28289834 Query: 185 gcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcgg 244 |||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||| Sbjct: 28289833 gcaggagaacgtcaagagggtgcggctcgccgataagtacctcagcgaggcggcgctcgg 28289774 Score = 83.8 bits (42), Expect = 5e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 2 cgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcgg 61 |||||||||||| ||||||||||| |||||||||| |||||||||||| |||||| | Sbjct: 28290013 cgacttcttcggggcgctgcgggcgcgggtgtacggcgacgaggtgcggcggtgggtggc 28289954 Query: 62 cgagatcggcgtggagaacatc 83 |||||||| |||||||||||| Sbjct: 28289953 ggagatcggggtggagaacatc 28289932
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 137 bits (69), Expect = 4e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||| || || || || || |||||||||||||||||||||||||| || Sbjct: 1070 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggtgtcggac 1129 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | || ||||||||||| |||| | || || ||||| |||||||| || || |||| Sbjct: 1130 acgggtgtggagaacattggcaagaggctggtgaactcgagggagggcccaccggagttc 1189 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || |||||||||||||| || || ||||||||||||||||| ||||||| || ||||| Sbjct: 1190 gagcagcccaagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggag 1249 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || || ||||| | |||||||| || || || Sbjct: 1250 caggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggt 1309 Query: 246 caagccaacgacgacgccatgaagaccggtgccttctacgg 286 | || ||| ||||||||||||||| ||| |||||||||| Sbjct: 1310 gacgctaactccgacgccatgaagactggttccttctacgg 1350
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 137 bits (69), Expect = 4e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||| || || || || || |||||||||||||||||||||||||| || Sbjct: 1064 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggtgtcggac 1123 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | || ||||||||||| |||| | || || ||||| |||||||| || || |||| Sbjct: 1124 acgggtgtggagaacattggcaagaggctggtgaactcgagggagggcccaccggagttc 1183 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || |||||||||||||| || || ||||||||||||||||| ||||||| || ||||| Sbjct: 1184 gagcagcccaagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggag 1243 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || || ||||| | |||||||| || || || Sbjct: 1244 caggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggt 1303 Query: 246 caagccaacgacgacgccatgaagaccggtgccttctacgg 286 | || ||| ||||||||||||||| ||| |||||||||| Sbjct: 1304 gacgctaactccgacgccatgaagactggttccttctacgg 1344
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 129 bits (65), Expect = 9e-27 Identities = 227/281 (80%) Strand = Plus / Plus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||| || || || || || |||||||||||||||||||||||||| || Sbjct: 1034 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggtgtcggac 1093 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | || ||||||||||| |||| | || || ||||| |||||||| || || |||| Sbjct: 1094 acgggtgtggagaacattggcaagaggctggtgaactcgagggagggcccaccggagttc 1153 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || |||||||||||||| || || |||||||| |||||||| ||||||| || ||||| Sbjct: 1154 gagcagcccaagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggag 1213 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || || ||||| | |||||||| || || || Sbjct: 1214 caggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggt 1273 Query: 246 caagccaacgacgacgccatgaagaccggtgccttctacgg 286 | || ||| ||||||||||||||| ||| |||||||||| Sbjct: 1274 gacgctaactccgacgccatgaagactggttccttctacgg 1314
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA, partial cds; nuclear gene for chloroplast product Length = 651 Score = 129 bits (65), Expect = 9e-27 Identities = 227/281 (80%) Strand = Plus / Plus Query: 6 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 65 ||||||||||| || || || || || |||||||||||||||||||||||||| || Sbjct: 283 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggtgtcggac 342 Query: 66 atcggcgtggagaacatctccaagcgcctcgtcaactccagggaggggccgcccacgttc 125 | || ||||||||||| |||| | || || ||||| |||||||| || || |||| Sbjct: 343 acgggtgtggagaacattggcaagaggctggtgaactcgagggagggcccaccggagttc 402 Query: 126 gaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggag 185 || |||||||||||||| || || |||||||| |||||||| ||||||| || ||||| Sbjct: 403 gagcagcccaagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggag 462 Query: 186 caggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgctcggc 245 |||||||||||||||||||||||||| || || ||||| | |||||||| || || || Sbjct: 463 caggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggt 522 Query: 246 caagccaacgacgacgccatgaagaccggtgccttctacgg 286 | || ||| ||||||||||||||| ||| |||||||||| Sbjct: 523 gacgctaactccgacgccatgaagactggttccttctacgg 563
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 121 bits (61), Expect = 2e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 107 ggaggggccgcccacgttcgaccagcccaagatgaccatagagaagctcatggagtacgg 166 |||||||||||| ||||||| ||||||||||||||| | || ||||| |||||||||| Sbjct: 1125 ggaggggccgccgacgttcgcgcagcccaagatgaccctggacaagctgctggagtacgg 1184 Query: 167 ccacatgctggtccaggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacct 226 | | |||||||| ||||| ||||||||||| ||| | |||||||| |||||||||||||| Sbjct: 1185 caatatgctggtgcaggaacaggagaacgtgaagagggtgcagctggccgacaagtacct 1244 Query: 227 cagcgaggc 235 |||||||| Sbjct: 1245 gagcgaggc 1253 Score = 46.1 bits (23), Expect = 0.10 Identities = 59/71 (83%) Strand = Plus / Plus Query: 3 gacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggc 62 ||||||||||| || ||| |||| |||| ||||||||||||||| | |||||| | | | Sbjct: 1021 gacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtggattgcc 1080 Query: 63 gagatcggcgt 73 || |||||||| Sbjct: 1081 gaaatcggcgt 1091
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 121 bits (61), Expect = 2e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 107 ggaggggccgcccacgttcgaccagcccaagatgaccatagagaagctcatggagtacgg 166 |||||||||||| ||||||| ||||||||||||||| | || ||||| |||||||||| Sbjct: 988 ggaggggccgccgacgttcgcgcagcccaagatgaccctggacaagctgctggagtacgg 1047 Query: 167 ccacatgctggtccaggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacct 226 | | |||||||| ||||| ||||||||||| ||| | |||||||| |||||||||||||| Sbjct: 1048 caatatgctggtgcaggaacaggagaacgtgaagagggtgcagctggccgacaagtacct 1107 Query: 227 cagcgaggc 235 |||||||| Sbjct: 1108 gagcgaggc 1116 Score = 46.1 bits (23), Expect = 0.10 Identities = 59/71 (83%) Strand = Plus / Plus Query: 3 gacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggc 62 ||||||||||| || ||| |||| |||| ||||||||||||||| | |||||| | | | Sbjct: 884 gacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtggattgcc 943 Query: 63 gagatcggcgt 73 || |||||||| Sbjct: 944 gaaatcggcgt 954
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 97.6 bits (49), Expect = 3e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 123 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 182 ||||| |||||||||||||| | |||||| | ||||||||||||||||||| |||||| Sbjct: 1189 ttcgagcagcccaagatgacggtggagaagttgctggagtacggccacatgcttgtccag 1248 Query: 183 gagcaggagaacgtcaagcgtgtgcagct 211 |||||||| || ||||||||||||||||| Sbjct: 1249 gagcaggacaatgtcaagcgtgtgcagct 1277 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 2 cgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 58 |||||||||||| || ||||| || ||||||||||||| ||||||||||||||||| Sbjct: 1068 cgacttcttcggtgctctgcgtgctcgggtgtacgacgttgaggtgcgcaagtgggt 1124
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 97.6 bits (49), Expect = 3e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 123 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 182 ||||| |||||||||||||| | |||||| | ||||||||||||||||||| |||||| Sbjct: 1199 ttcgagcagcccaagatgacggtggagaagttgctggagtacggccacatgcttgtccag 1258 Query: 183 gagcaggagaacgtcaagcgtgtgcagct 211 |||||||| || ||||||||||||||||| Sbjct: 1259 gagcaggacaatgtcaagcgtgtgcagct 1287 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 2 cgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 58 |||||||||||| || ||||| || |||||||||||||||||||||||||||||||| Sbjct: 1078 cgacttcttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggt 1134
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 123 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 182 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 1258 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 1317 Query: 183 gagcaggagaacgtcaagcgtgtgcagct 211 |||||||| || ||||||||||||||||| Sbjct: 1318 gagcaggacaatgtcaagcgtgtgcagct 1346 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 3 gacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggc 62 ||||| ||||| || ||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 1138 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 1197
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 123 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 182 ||||| ||||| |||||||| | |||||||| | |||||||| |||||||| |||||| Sbjct: 1003 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 1062 Query: 183 gagcaggagaacgtcaagcgtgtgcagct 211 |||||||| || ||||||||||||||||| Sbjct: 1063 gagcaggacaatgtcaagcgtgtgcagct 1091 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 3 gacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggc 62 ||||| ||||| || ||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 883 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 942
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase precursor RNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 129 cagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggagcag 188 ||||| |||||||| | |||||||| | |||||||| |||||||| |||||||||||| Sbjct: 334 cagccaaagatgacagtggagaagctgctagagtacgggcacatgctcgtccaggagcag 393 Query: 189 gagaacgtcaagcgtgtgcagct 211 || || ||||||||||||||||| Sbjct: 394 gacaatgtcaagcgtgtgcagct 416 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 2 cgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 58 |||||| ||||| || ||||| || |||||||||||||||||||||||||||||||| Sbjct: 207 cgactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggt 263
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 129 cagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggagcag 188 ||||| |||||||| | |||||||| | |||||||| |||||||| |||||||||||| Sbjct: 1184 cagccaaagatgacagtggagaagctgctagagtacgggcacatgctcgtccaggagcag 1243 Query: 189 gagaacgtcaagcgtgtgcagct 211 || || ||||||||||||||||| Sbjct: 1244 gacaatgtcaagcgtgtgcagct 1266 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 2 cgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 58 |||||| ||||| || ||||| || |||||||||||||||||||||||||||||||| Sbjct: 1057 cgactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggt 1113
>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco activase (rba1 gene) Length = 321 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 129 cagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggagcag 188 ||||| |||||||| | |||||||| | |||||||| |||||||| |||||||||||| Sbjct: 128 cagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcag 187 Query: 189 gagaacgtcaagcgtgtgcagct 211 || || ||||||||||||||||| Sbjct: 188 gacaatgtcaagcgtgtgcagct 210 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 3 gacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 58 ||||| ||||| || ||||| || |||||||||||||||||||||||||||||||| Sbjct: 2 gactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggt 57
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 129 cagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccaggagcag 188 |||||||||||||| || || |||||| | | ||||| |||||| |||||||||||| Sbjct: 1222 cagcccaagatgacaattgataagctccttggctacggaggcatgcttgtccaggagcag 1281 Query: 189 gagaacgtcaag 200 |||||||||||| Sbjct: 1282 gagaacgtcaag 1293
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 183 gagcaggagaacgtcaagcgtgtgcagctcgccga 217 |||||||||||||||||||| |||||||| ||||| Sbjct: 3205 gagcaggagaacgtcaagcgcgtgcagctggccga 3239 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 3 gacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgg 56 |||||||||||||| ||||| || || |||||||||||| ||||||| ||||| Sbjct: 2686 gacttcttcggcgccctgcgtgcccgcgtgtacgacgacatggtgcgccagtgg 2739
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 183 gagcaggagaacgtcaagcgtgtgcagctcgccga 217 |||||||||||||||||||| |||||||| ||||| Sbjct: 1173 gagcaggagaacgtcaagcgcgtgcagctggccga 1207 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 3 gacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgg 56 |||||||||||||| ||||| || || |||||||||||| ||||||| ||||| Sbjct: 996 gacttcttcggcgccctgcgtgcccgcgtgtacgacgacatggtgcgccagtgg 1049
>gb|DQ123944.1| Coffea arabica x Coffea canephora clone HT-SSH2-H08 mRNA sequence Length = 488 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 161 gtacggccacatgctggtccaggagcaggagaacgt 196 ||||||| ||||||| ||||| |||||||||||||| Sbjct: 1 gtacggcaacatgctcgtccaagagcaggagaacgt 36
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 2 cgacttcttcggcgcgctgcgggcacgggtgtacgacgac 41 ||||||||||||||| || || || ||||||||||||||| Sbjct: 580 cgacttcttcggcgccctccgcgcccgggtgtacgacgac 619
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 2 cgacttcttcggcgcgctgcgggcacgggtgtacgacgac 41 ||||||||||||||| || || || ||||||||||||||| Sbjct: 588 cgacttcttcggcgccctccgcgcccgggtgtacgacgac 627
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 183 gagcaggagaacgtcaagcgtgtgcagctcgc 214 ||||||||||| |||||||| ||||||||||| Sbjct: 2105 gagcaggagaatgtcaagcgcgtgcagctcgc 2136
>gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosome 13, complete sequence Length = 192473 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gctggtccaggagcaggagaacgtcaagc 201 |||||||||||| |||||||| ||||||| Sbjct: 170592 gctggtccaggaacaggagaatgtcaagc 170620
>ref|XM_974982.1| PREDICTED: Mus musculus desmoplakin (Dsp), mRNA Length = 8280 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gctggtccaggagcaggagaacgtcaagc 201 |||||||||||| |||||||| ||||||| Sbjct: 4749 gctggtccaggaacaggagaatgtcaagc 4777
>ref|XM_912083.2| PREDICTED: Mus musculus desmoplakin, transcript variant 3 (Dsp), mRNA Length = 8583 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gctggtccaggagcaggagaacgtcaagc 201 |||||||||||| |||||||| ||||||| Sbjct: 4968 gctggtccaggaacaggagaatgtcaagc 4996
>ref|XM_621314.3| PREDICTED: Mus musculus desmoplakin, transcript variant 1 (Dsp), mRNA Length = 9592 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gctggtccaggagcaggagaacgtcaagc 201 |||||||||||| |||||||| ||||||| Sbjct: 5332 gctggtccaggaacaggagaatgtcaagc 5360
>gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, complete sequence Length = 199240 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gctggtccaggagcaggagaacgtcaagc 201 |||||||||||| |||||||| ||||||| Sbjct: 40057 gctggtccaggaacaggagaatgtcaagc 40085
>gb|AC079326.8| Homo sapiens chromosome 11, clone RP11-233I10, complete sequence Length = 180353 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 419 aaagagaaaggaattgtatatgttcttaa 447 ||||||||||||||||| |||||| |||| Sbjct: 123387 aaagagaaaggaattgtgtatgttattaa 123415
>gb|AC091097.8| Homo sapiens chromosome 11, clone RP11-65C9, complete sequence Length = 162515 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 419 aaagagaaaggaattgtatatgttcttaa 447 ||||||||||||||||| |||||| |||| Sbjct: 140931 aaagagaaaggaattgtgtatgttattaa 140903
>dbj|AK009006.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2300002E22 product:desmoplakin, full insert sequence Length = 1423 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gctggtccaggagcaggagaacgtcaagc 201 |||||||||||| |||||||| ||||||| Sbjct: 775 gctggtccaggaacaggagaatgtcaagc 803
>gb|BC033467.1| Mus musculus desmoplakin, mRNA (cDNA clone IMAGE:4949004) Length = 2915 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gctggtccaggagcaggagaacgtcaagc 201 |||||||||||| |||||||| ||||||| Sbjct: 2579 gctggtccaggaacaggagaatgtcaagc 2607
>ref|NM_124725.2| Arabidopsis thaliana GLT1 AT5G53460 (GLT1) mRNA, complete cds Length = 6627 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 ttaaatcgtcattttccgct 463 |||||||||||||||||||| Sbjct: 278 ttaaatcgtcattttccgct 297
>gb|AC155204.4| Colobus guereza clone CH272-163G5, complete sequence Length = 26789 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aaagagaaaggaattgtata 438 |||||||||||||||||||| Sbjct: 16435 aaagagaaaggaattgtata 16416
>gb|BC033474.1| Homo sapiens renin, mRNA (cDNA clone MGC:34221 IMAGE:5188566), complete cds Length = 1475 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 937 ccatagagaagctcatggag 956
>gb|AY664490.1| Macaca fascicularis renin (REN) mRNA, complete cds Length = 1280 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 970 ccatagagaagctcatggag 989
>gb|BC047752.1| Homo sapiens renin, mRNA (cDNA clone MGC:54147 IMAGE:5590211), complete cds Length = 1471 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 940 ccatagagaagctcatggag 959
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 40.1 bits (20), Expect = 6.4 Identities = 74/92 (80%) Strand = Plus / Plus Query: 135 aagatgaccatagagaagctcatggagtacggccacatgctggtccaggagcaggagaac 194 |||||||| || || |||||| | ||||||||| ||||||| || || ||||| ||||| Sbjct: 1241 aagatgactatcgataagctcctcgagtacggcaacatgcttgttcaagagcaagagaat 1300 Query: 195 gtcaagcgtgtgcagctcgccgacaagtacct 226 || ||| | || ||| | || ||||||||||| Sbjct: 1301 gttaagagagttcagttagctgacaagtacct 1332
>gb|AC091381.3| Papio anubis clone RP41-468N20, complete sequence Length = 156353 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aaagagaaaggaattgtata 438 |||||||||||||||||||| Sbjct: 124727 aaagagaaaggaattgtata 124708
>gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, complete sequence Length = 162020 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 314 atgcatgcatgcactatatatatg 337 |||||||||||||||||| ||||| Sbjct: 122721 atgcatgcatgcactatacatatg 122744
>ref|NM_001032916.1| Macaca mulatta prorenin (REN), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 955 ccatagagaagctcatggag 974
>ref|XM_743857.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g05590) partial mRNA Length = 720 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gagaagctcatggagtacgg 166 |||||||||||||||||||| Sbjct: 193 gagaagctcatggagtacgg 212
>gb|L00071.1|HUMREN08 Human renin gene, exon 8 Length = 172 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 105 ccatagagaagctcatggag 124
>gb|AC093889.2| Homo sapiens BAC clone RP11-671G14 from 7, complete sequence Length = 198453 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 atgcatgcactatatatatg 337 |||||||||||||||||||| Sbjct: 31492 atgcatgcactatatatatg 31511
>ref|NM_000537.2| Homo sapiens renin (REN), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 955 ccatagagaagctcatggag 974
>emb|AL592146.8| Human DNA sequence from clone RP11-74C13 on chromosome 1 Contains the SOX13 gene for SOX13 SRY (sex determining region Y)-box 13, two novel genes, a novel gene (FLJ10761), the 3' end of the REN gene for renin and two CpG islands, complete sequence Length = 101862 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 95070 ccatagagaagctcatggag 95051
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cggcgcgctgcgggcacggg 30 |||||||||||||||||||| Sbjct: 2456155 cggcgcgctgcgggcacggg 2456174
>emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in linkage group 19, complete sequence Length = 187377 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 atgcatgcatgcactatata 333 |||||||||||||||||||| Sbjct: 65551 atgcatgcatgcactatata 65570
>emb|X00063.1|HSRENK Human kidney mRNA fragment for renin (aa 105-401) Length = 1096 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 590 ccatagagaagctcatggag 609
>emb|CR926484.1| Pongo pygmaeus mRNA; cDNA DKFZp469I191 (from clone DKFZp469I191) Length = 1474 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 955 ccatagagaagctcatggag 974
>emb|CR536498.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0620D for gene REN, renin; complete cds, incl. stopcodon Length = 1221 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 911 ccatagagaagctcatggag 930
>gb|AY436324.1| Homo sapiens renin (REN) gene, complete cds Length = 14148 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 11619 ccatagagaagctcatggag 11638
>emb|AJ132342.1|CJA132342 Callithrix jacchus mRNA for preprorenin Length = 1203 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 893 ccatagagaagctcatggag 912
>emb|AL589679.14| Mouse DNA sequence from clone RP23-189A16 on chromosome 13 Contains the 3' end of the Csh1 gene for chorionic somatomammotropin hormone 1, two genes for novel proteins similar to chorionic somatomammotropin hormone 1 (Csh1), the Prlpi gene for prolactin-like protein I (Prlpj, decidualin), the Csh2 gene for chorionic somatomammotropin hormone 2, the gene for protein 1600016E11RIK similar to prolactin and a novel gene (4930511O05Rik), complete sequence Length = 207737 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 cactatatatatgttggactattt 348 |||||||||||| ||||||||||| Sbjct: 162403 cactatatatattttggactattt 162426
>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase (pJQ11) Length = 883 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 135 aagatgaccatagagaagctcatggagtacgg 166 ||||||||||| ||||||||| | |||||||| Sbjct: 464 aagatgaccattgagaagctcctcgagtacgg 495
>gb|M10151.1|HUMRENA4 Homo sapiens renin (REN) gene, exons 6, 7, 8, and 9 Length = 3057 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 2153 ccatagagaagctcatggag 2172
>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold Length = 1678549 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aaagagaaaggaattgtata 438 |||||||||||||||||||| Sbjct: 1390510 aaagagaaaggaattgtata 1390491
>gb|AC024259.17| Homo sapiens chromosome 7 clone RP11-105B19, complete sequence Length = 177303 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 atgcatgcactatatatatg 337 |||||||||||||||||||| Sbjct: 68652 atgcatgcactatatatatg 68633
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 gggtcggcgagatcggcgtg 74 |||||||||||||||||||| Sbjct: 2558516 gggtcggcgagatcggcgtg 2558497
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 cttgaaagagaaaggaattg 434 |||||||||||||||||||| Sbjct: 731305 cttgaaagagaaaggaattg 731324
>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold Length = 1825024 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aaagagaaaggaattgtata 438 |||||||||||||||||||| Sbjct: 1413326 aaagagaaaggaattgtata 1413307
>gb|AC123966.4| Macaca mulatta clone CH250-72H9, complete sequence Length = 114602 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aaagagaaaggaattgtata 438 |||||||||||||||||||| Sbjct: 65226 aaagagaaaggaattgtata 65207
>gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosome 13, complete sequence Length = 146998 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gcatgcactatatatatgtt 339 |||||||||||||||||||| Sbjct: 90 gcatgcactatatatatgtt 109
>gb|AF193454.1|F193446S09 Pan troglodytes renin (REN) gene, exon 8 Length = 142 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 93 ccatagagaagctcatggag 112
>gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, complete sequence Length = 157544 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 tgcatgcatgcactatatatatgt 338 |||||||||| ||||||||||||| Sbjct: 121036 tgcatgcatgtactatatatatgt 121059
>ref|NM_001009122.1| Pan troglodytes renin (REN), mRNA Length = 1221 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 911 ccatagagaagctcatggag 930
>gb|AC079378.2| Rattus norvegicus strain Brown Norway chromosome 4 clone RP31-7L11, complete sequence Length = 189137 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tcttgaaagagaaaggaatt 433 |||||||||||||||||||| Sbjct: 76233 tcttgaaagagaaaggaatt 76252
>gb|AC078941.6| Homo sapiens BAC clone RP11-180B10 from 2, complete sequence Length = 165176 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 419 aaagagaaaggaattgtatatgttctta 446 ||||||||||||||||||| ||| |||| Sbjct: 33392 aaagagaaaggaattgtatctgtactta 33365
>gb|AY662332.2| Macaca mulatta prorenin (REN) mRNA, complete cds Length = 1461 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ccatagagaagctcatggag 161 |||||||||||||||||||| Sbjct: 955 ccatagagaagctcatggag 974
>dbj|AB020754.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYN8 Length = 54528 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 ttaaatcgtcattttccgct 463 |||||||||||||||||||| Sbjct: 41556 ttaaatcgtcattttccgct 41575
>emb|BX936423.12| Zebrafish DNA sequence from clone DKEY-174M14 in linkage group 20, complete sequence Length = 170767 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 ccaagatgaccatagagaagctca 156 ||||||||||||| |||||||||| Sbjct: 59964 ccaagatgaccattgagaagctca 59941
>gb|AC154184.1| Mus musculus BAC clone RP24-67K24 from 13, complete sequence Length = 151468 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 gcatgcactatatatatgtt 339 |||||||||||||||||||| Sbjct: 19309 gcatgcactatatatatgtt 19290
>gb|AC138437.3| Cercopithecus aethiops clone CH252-390I5, complete sequence Length = 182169 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aaagagaaaggaattgtata 438 |||||||||||||||||||| Sbjct: 109427 aaagagaaaggaattgtata 109408
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 135 aagatgaccatagagaagctcatggagtacgg 166 ||||||||||| ||||||||| | |||||||| Sbjct: 1224 aagatgaccattgagaagctcctcgagtacgg 1255
>emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chromosome X, complete sequence Length = 175802 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 acttaagatgcatgcatgca 326 |||||||||||||||||||| Sbjct: 22306 acttaagatgcatgcatgca 22325 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,997,365 Number of Sequences: 3902068 Number of extensions: 3997365 Number of successful extensions: 81607 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81121 Number of HSP's gapped (non-prelim): 463 length of query: 471 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 449 effective length of database: 17,147,199,772 effective search space: 7699092697628 effective search space used: 7699092697628 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
