ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal27i20 |
|---|---|
| Clone Library Name | barley_pub |
>FADR_VIBVY (Q7MJP0) Fatty acid metabolism regulator protein| Length = 279 Score = 33.1 bits (74), Expect = 0.36 Identities = 17/38 (44%), Positives = 22/38 (57%) Frame = -2 Query: 459 FHREGGLIYSQFYNSVKEIYDANKCFPFANDAMEELAL 346 FH G IY +N +K++YD F F+N A ELAL Sbjct: 194 FH-SGNQIYGLIFNGLKKLYDRVGSFYFSNPASRELAL 230
>FADR_VIBVU (Q8DAG8) Fatty acid metabolism regulator protein| Length = 279 Score = 33.1 bits (74), Expect = 0.36 Identities = 17/38 (44%), Positives = 22/38 (57%) Frame = -2 Query: 459 FHREGGLIYSQFYNSVKEIYDANKCFPFANDAMEELAL 346 FH G IY +N +K++YD F F+N A ELAL Sbjct: 194 FH-SGNQIYGLIFNGLKKLYDRVGSFYFSNPASRELAL 230
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 32.0 bits (71), Expect = 0.81 Identities = 23/66 (34%), Positives = 37/66 (56%) Frame = +3 Query: 129 AVVRSRCGSDP*FPETQPTLRGAPRGCRMTSVVRLVVHDGSVAYLPSTPPRRFSRLDGPL 308 AV S G DP FP P +P+ + ++ +L V D +V + +TPP FSRL+ Sbjct: 2311 AVCPSAHGQDP-FPSCGPNSVLSPQRLALEALCKLCVTDANVDLVIATPP--FSRLE--- 2364 Query: 309 QVCSLL 326 ++C++L Sbjct: 2365 KLCAVL 2370
>6PGD_HAEDU (Q7VMX4) 6-phosphogluconate dehydrogenase, decarboxylating (EC| 1.1.1.44) Length = 484 Score = 31.6 bits (70), Expect = 1.1 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -2 Query: 453 REGGLIYSQFYNSVKEIYDANKCFPFANDAMEELALDPNIRNATRNILGGGRR-DAKTVE 277 REG +I S F ++++ Y+AN F L DP +N ++ + R+ AK++E Sbjct: 363 REGCIIRSAFLGNIRDAYEANPGLVF-------LGSDPYFQNILQSAMADWRKVVAKSIE 415 Query: 276 VG 271 +G Sbjct: 416 IG 417
>FADR_VIBPA (Q87N05) Fatty acid metabolism regulator protein| Length = 279 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -2 Query: 459 FHREGGLIYSQFYNSVKEIYDANKCFPFANDAMEELAL 346 FH G IY +N +K++YD + F+N A +LAL Sbjct: 194 FH-SGNQIYGLIFNGLKKLYDRVGSYYFSNPASRDLAL 230
>XDH_RAT (P22985) Xanthine dehydrogenase/oxidase [Includes: Xanthine| dehydrogenase (EC 1.17.1.4) (XD); Xanthine oxidase (EC 1.17.3.2) (XO) (Xanthine oxidoreductase)] Length = 1330 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/52 (28%), Positives = 26/52 (50%) Frame = +2 Query: 227 ASRSARWVRCLLAKYPTSTVFASRRPPPSMFLVAFRMLGSRASSSIASFANG 382 A ++ R VRC+L + + R P + + V F G+ + +A F+NG Sbjct: 815 AHKTGRPVRCMLDRDEDMLITGGRHPFLAKYKVGFMKTGTVVALEVAHFSNG 866
>PEPT_STRMU (Q8CWX9) Peptidase T (EC 3.4.11.4) (Tripeptide aminopeptidase)| (Aminotripeptidase) (Tripeptidase) Length = 406 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -2 Query: 438 IYSQFYNSVKEIYDANKCFPFANDAMEELALDPNI 334 IY Q+YN K I C A ME LA++P I Sbjct: 316 IYDQYYNMRKIIKKDMTCVKLAKKVMENLAIEPII 350
>6PGD_HAEIN (P43774) 6-phosphogluconate dehydrogenase, decarboxylating (EC| 1.1.1.44) Length = 484 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -2 Query: 453 REGGLIYSQFYNSVKEIYDANKCFPFANDAMEELALDPNIRNATRNILGGGRR-DAKTVE 277 REG +I S+F ++++ Y+AN F L D + N L R+ AK++E Sbjct: 363 REGCIIRSRFLGNIRDAYEANPNLVF-------LGSDSYFKGILENALSDWRKVVAKSIE 415 Query: 276 VG 271 VG Sbjct: 416 VG 417
>FADR_VIBCH (Q9KQU8) Fatty acid metabolism regulator protein| Length = 279 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -2 Query: 459 FHREGGLIYSQFYNSVKEIYDANKCFPFANDAMEELALD 343 FH G IY +N +K++YD + F+N ELA++ Sbjct: 194 FH-SGNQIYGLIFNGLKKLYDRVGSYYFSNPQARELAME 231
>6PGD_STAES (Q8CP47) 6-phosphogluconate dehydrogenase, decarboxylating (EC| 1.1.1.44) Length = 468 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -2 Query: 453 REGGLIYSQFYNSVKEIYDANKCFPFANDAMEELALDPNIRN 328 REG +I +QF +K+ YD N+ ++ L LDP +N Sbjct: 360 REGCIIRAQFLQKIKDAYD-------NNENLQNLLLDPYFKN 394
>6PGD_STAEQ (Q5HP42) 6-phosphogluconate dehydrogenase, decarboxylating (EC| 1.1.1.44) Length = 468 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -2 Query: 453 REGGLIYSQFYNSVKEIYDANKCFPFANDAMEELALDPNIRN 328 REG +I +QF +K+ YD N+ ++ L LDP +N Sbjct: 360 REGCIIRAQFLQKIKDAYD-------NNENLQNLLLDPYFKN 394
>HUTG_VIBCH (Q9KSQ2) Formimidoylglutamase (EC 3.5.3.8) (Formiminoglutamase)| (Formiminoglutamate hydrolase) Length = 336 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/62 (30%), Positives = 25/62 (40%) Frame = -2 Query: 312 LGGGRRDAKTVEVGYLASKQRTHRALRDARQKSYGIREEHRVTWAVFQGIMDRFRTESAR 133 LG R + +E Q +AL AR G H + WA FQG+ F + Sbjct: 90 LGNIRCEGDELEQAQQECAQVIQQALPHARAIVLG--GGHEIAWATFQGLAQHFLATGVK 147 Query: 132 QP 127 QP Sbjct: 148 QP 149
>6PGD_STAAW (P63335) 6-phosphogluconate dehydrogenase, decarboxylating (EC| 1.1.1.44) Length = 468 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 453 REGGLIYSQFYNSVKEIYDANKCFPFANDAMEELALDPNIRN 328 REG +I +QF +K+ YD N ++ L LDP +N Sbjct: 360 REGCIIRAQFLQKIKDAYD-------NNPGLQNLLLDPYFKN 394
>6PGD_STAAS (Q6G954) 6-phosphogluconate dehydrogenase, decarboxylating (EC| 1.1.1.44) Length = 468 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 453 REGGLIYSQFYNSVKEIYDANKCFPFANDAMEELALDPNIRN 328 REG +I +QF +K+ YD N ++ L LDP +N Sbjct: 360 REGCIIRAQFLQKIKDAYD-------NNPGLQNLLLDPYFKN 394
>6PGD_STAAR (Q6GGI7) 6-phosphogluconate dehydrogenase, decarboxylating (EC| 1.1.1.44) Length = 468 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 453 REGGLIYSQFYNSVKEIYDANKCFPFANDAMEELALDPNIRN 328 REG +I +QF +K+ YD N ++ L LDP +N Sbjct: 360 REGCIIRAQFLQKIKDAYD-------NNPGLQNLLLDPYFKN 394
>6PGD_STAAN (P63334) 6-phosphogluconate dehydrogenase, decarboxylating (EC| 1.1.1.44) Length = 468 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 453 REGGLIYSQFYNSVKEIYDANKCFPFANDAMEELALDPNIRN 328 REG +I +QF +K+ YD N ++ L LDP +N Sbjct: 360 REGCIIRAQFLQKIKDAYD-------NNPGLQNLLLDPYFKN 394
>6PGD_STAAM (Q931R3) 6-phosphogluconate dehydrogenase, decarboxylating (EC| 1.1.1.44) Length = 468 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 453 REGGLIYSQFYNSVKEIYDANKCFPFANDAMEELALDPNIRN 328 REG +I +QF +K+ YD N ++ L LDP +N Sbjct: 360 REGCIIRAQFLQKIKDAYD-------NNPGLQNLLLDPYFKN 394
>6PGD_STAAC (Q5HFR2) 6-phosphogluconate dehydrogenase, decarboxylating (EC| 1.1.1.44) Length = 468 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 453 REGGLIYSQFYNSVKEIYDANKCFPFANDAMEELALDPNIRN 328 REG +I +QF +K+ YD N ++ L LDP +N Sbjct: 360 REGCIIRAQFLQKIKDAYD-------NNPGLQNLLLDPYFKN 394
>XDH_MOUSE (Q00519) Xanthine dehydrogenase/oxidase [Includes: Xanthine| dehydrogenase (EC 1.17.1.4) (XD); Xanthine oxidase (EC 1.17.3.2) (XO) (Xanthine oxidoreductase)] Length = 1334 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/52 (28%), Positives = 26/52 (50%) Frame = +2 Query: 227 ASRSARWVRCLLAKYPTSTVFASRRPPPSMFLVAFRMLGSRASSSIASFANG 382 A ++ R VRC+L + + R P + + V F G+ + +A F+NG Sbjct: 818 AYKTGRPVRCMLDRDEDMLITGGRHPFLAKYKVGFMKTGTIVALEVAHFSNG 869
>ATTY_RAT (P04694) Tyrosine aminotransferase (EC 2.6.1.5)| (L-tyrosine:2-oxoglutarate aminotransferase) (TAT) Length = 454 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 11/68 (16%) Frame = -2 Query: 423 YNSVKEIYDANKCFPFANDAMEELAL-----------DPNIRNATRNILGGGRRDAKTVE 277 +N ++ I D K P N + L++ DP + A ++ L G+ + Sbjct: 53 FNPIRAIVDNMKVQPNPNKTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPS 112 Query: 276 VGYLASKQ 253 +GYL+S++ Sbjct: 113 IGYLSSRE 120
>ATTY_MOUSE (Q8QZR1) Tyrosine aminotransferase (EC 2.6.1.5)| (L-tyrosine:2-oxoglutarate aminotransferase) (TAT) Length = 454 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 11/68 (16%) Frame = -2 Query: 423 YNSVKEIYDANKCFPFANDAMEELAL-----------DPNIRNATRNILGGGRRDAKTVE 277 +N ++ I D K P N + L++ DP + A ++ L G+ + Sbjct: 53 FNPIRAIVDNMKVKPNPNKTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPS 112 Query: 276 VGYLASKQ 253 +GYL+S++ Sbjct: 113 IGYLSSRE 120
>ATTY_HUMAN (P17735) Tyrosine aminotransferase (EC 2.6.1.5)| (L-tyrosine:2-oxoglutarate aminotransferase) (TAT) Length = 454 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 11/68 (16%) Frame = -2 Query: 423 YNSVKEIYDANKCFPFANDAMEELAL-----------DPNIRNATRNILGGGRRDAKTVE 277 +N ++ I D K P N M L++ DP + A ++ L G+ + Sbjct: 53 FNPIRAIVDNMKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPS 112 Query: 276 VGYLASKQ 253 +G+L+S++ Sbjct: 113 IGFLSSRE 120
>6PGD_ACTAC (P70718) 6-phosphogluconate dehydrogenase, decarboxylating (EC| 1.1.1.44) Length = 484 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -2 Query: 453 REGGLIYSQFYNSVKEIYDANKCFPFANDAMEELALDPNIRNATRNILGGGRR-DAKTVE 277 REG +I S+F ++++ Y+AN F L D + N + R+ AK++E Sbjct: 363 REGCIIRSRFLGNIRDAYEANPDLIF-------LGSDSYFKGILENAMSDWRKVVAKSIE 415 Query: 276 VG 271 VG Sbjct: 416 VG 417
>O2T34_HUMAN (Q8NGX1) Olfactory receptor 2T34 (Olfactory receptor OR1-63)| Length = 318 Score = 28.9 bits (63), Expect = 6.8 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 8/60 (13%) Frame = +3 Query: 195 APRGCRMTSVVRLVVHDGSVAYLPSTPPRRFSRLDGPL--------QVCSLLRSGCWDLG 350 +P GC + L + V L + R++ + PL +VC LL S CW LG Sbjct: 98 SPSGCGIQMFFHLTLAGAEVFLLAAMAYDRYAAVCRPLHYPLLMNQRVCQLLVSACWVLG 157
>DPO1_THEAQ (P19821) DNA polymerase I, thermostable (EC 2.7.7.7) (Taq| polymerase 1) Length = 832 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +1 Query: 79 SPDGPRVRRAFIQERCWLSCAL 144 +P G R+RRAFI E WL AL Sbjct: 588 TPLGQRIRRAFIAEEGWLLVAL 609
>MURB_BURS3 (Q39DI6) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 349 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = +1 Query: 61 EVDVYFSPDGP-RVRRAFIQERC-WLSCALGAEAIHD 165 EV Y PDG ++ ++ +RC W ALGA A+HD Sbjct: 270 EVVSYPQPDGQVKLAAGWLIDRCGWKGRALGAAAVHD 306 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,322,895 Number of Sequences: 219361 Number of extensions: 1497207 Number of successful extensions: 4436 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 4319 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4434 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
