ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal27h17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic D... 260 5e-66
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 260 5e-66
3dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic D... 260 5e-66
4dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic D... 260 5e-66
5dbj|AK101567.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 5e-66
6ref|NM_193801.1| Oryza sativa (japonica cultivar-group), predic... 256 7e-65
7ref|XM_790829.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.1
8ref|XM_790808.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.1
9gb|L00113.1|RATELAI2 Rat elastase I gene, exons 3 and 4 42 2.1
10gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 gen... 42 2.1
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
12gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
13ref|XM_428279.1| PREDICTED: Gallus gallus similar to Gene model ... 40 8.2
14gb|DQ366713.1| Uncultured Prochlorococcus marinus clone ASNC1430... 40 8.2
15emb|AL391054.10| Human DNA sequence from clone RP1-228J4 on chro... 40 8.2
16emb|AL355604.11| Human DNA sequence from clone RP11-404E6 on chr... 40 8.2
17emb|AL031588.1|HS1163J1 Human DNA sequence from clone RP5-1163J1... 40 8.2
18emb|AL662843.11| Mouse DNA sequence from clone RP23-411E22 on ch... 40 8.2
19gb|AF448221.1| Homo sapiens 5-methylaminomethyl-2-thiouridylate-... 40 8.2
20dbj|AK093743.1| Homo sapiens cDNA FLJ36424 fis, clone THYMU20113... 40 8.2
21gb|AC024093.46| Homo sapiens 12 BAC RP11-791I2 (Roswell Park Can... 40 8.2
22dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
23dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
24dbj|BS000040.1| Pan troglodytes chromosome 22 clone:PTB-075B06, ... 40 8.2
25dbj|AK000212.1| Homo sapiens cDNA FLJ20205 fis, clone COLF1506 40 8.2
26emb|BX897712.12| Zebrafish DNA sequence from clone CH211-146A9 i... 40 8.2
27gb|AC145932.3| Gallus gallus BAC clone CH261-37K10 from chromoso... 40 8.2
28emb|AL672247.8| Mouse DNA sequence from clone RP23-95I19 on chro... 40 8.2 
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0560B06
          Length = 161720

 Score =  260 bits (131), Expect = 5e-66
 Identities = 283/334 (84%), Gaps = 6/334 (1%)
 Strand = Plus / Minus

                                                                        
Query: 130  agatggattacatatcccctgagagaagtctggatgggacttgtggagaccctgggcctt 189
            |||||||||||||||||||||| ||||||||||| ||| |||||||||| || || ||||
Sbjct: 9602 agatggattacatatcccctgatagaagtctggaaggggcttgtggagatcccggacctt 9543

                                                                        
Query: 190  tatttggagatcaagatggtagcttgttggagcacatggattatcatggtgaaggaatta 249
            ||||||||||||| ||||| |||||||| |||||||||| || ||| || ||      | 
Sbjct: 9542 tatttggagatcatgatgggagcttgttagagcacatgggttttcacgggga------tc 9489

                                                                        
Query: 250  cacaacctgaatccccaccgctgaatgatggacttttagttgatgcagccgatcaaattt 309
            |||||| || ||| |||| ||| ||||| || |||||||||||| || | || |||||||
Sbjct: 9488 cacaacatgtatctccacagctaaatgaagggcttttagttgattcaactgaccaaattt 9429

                                                                        
Query: 310  catatttgtctgcagattctgtaccctatatgaatgatcagatcatgtgcaatacaatga 369
            |||||||| |||| ||||||    |||  ||||||||||| |||   |||||||||||||
Sbjct: 9428 catatttggctgctgattctccgtccttcatgaatgatcaaatcccatgcaatacaatga 9369

                                                                        
Query: 370  aatctgcttcaactagtccagcatctcccctgaagcaagacgaggagcatcatgtgcata 429
            | ||||| |||||||||||||||||||||||||||||||  || || |||||||||||||
Sbjct: 9368 agtctgcctcaactagtccagcatctcccctgaagcaagcagatgaccatcatgtgcata 9309

                                              
Query: 430  tagaatctgatatgcaaaatgatgcagctgaaca 463
            |||| ||||||||| |||||||||||||||||||
Sbjct: 9308 tagattctgatatggaaaatgatgcagctgaaca 9275
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  260 bits (131), Expect = 5e-66
 Identities = 283/334 (84%), Gaps = 6/334 (1%)
 Strand = Plus / Minus

                                                                            
Query: 130      agatggattacatatcccctgagagaagtctggatgggacttgtggagaccctgggcctt 189
                |||||||||||||||||||||| ||||||||||| ||| |||||||||| || || ||||
Sbjct: 14993550 agatggattacatatcccctgatagaagtctggaaggggcttgtggagatcccggacctt 14993491

                                                                            
Query: 190      tatttggagatcaagatggtagcttgttggagcacatggattatcatggtgaaggaatta 249
                ||||||||||||| ||||| |||||||| |||||||||| || ||| || ||      | 
Sbjct: 14993490 tatttggagatcatgatgggagcttgttagagcacatgggttttcacgggga------tc 14993437

                                                                            
Query: 250      cacaacctgaatccccaccgctgaatgatggacttttagttgatgcagccgatcaaattt 309
                |||||| || ||| |||| ||| ||||| || |||||||||||| || | || |||||||
Sbjct: 14993436 cacaacatgtatctccacagctaaatgaagggcttttagttgattcaactgaccaaattt 14993377

                                                                            
Query: 310      catatttgtctgcagattctgtaccctatatgaatgatcagatcatgtgcaatacaatga 369
                |||||||| |||| ||||||    |||  ||||||||||| |||   |||||||||||||
Sbjct: 14993376 catatttggctgctgattctccgtccttcatgaatgatcaaatcccatgcaatacaatga 14993317

                                                                            
Query: 370      aatctgcttcaactagtccagcatctcccctgaagcaagacgaggagcatcatgtgcata 429
                | ||||| |||||||||||||||||||||||||||||||  || || |||||||||||||
Sbjct: 14993316 agtctgcctcaactagtccagcatctcccctgaagcaagcagatgaccatcatgtgcata 14993257

                                                  
Query: 430      tagaatctgatatgcaaaatgatgcagctgaaca 463
                |||| ||||||||| |||||||||||||||||||
Sbjct: 14993256 tagattctgatatggaaaatgatgcagctgaaca 14993223
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>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0784G04
          Length = 157458

 Score =  260 bits (131), Expect = 5e-66
 Identities = 283/334 (84%), Gaps = 6/334 (1%)
 Strand = Plus / Minus

                                                                         
Query: 130   agatggattacatatcccctgagagaagtctggatgggacttgtggagaccctgggcctt 189
             |||||||||||||||||||||| ||||||||||| ||| |||||||||| || || ||||
Sbjct: 33112 agatggattacatatcccctgatagaagtctggaaggggcttgtggagatcccggacctt 33053

                                                                         
Query: 190   tatttggagatcaagatggtagcttgttggagcacatggattatcatggtgaaggaatta 249
             ||||||||||||| ||||| |||||||| |||||||||| || ||| || ||      | 
Sbjct: 33052 tatttggagatcatgatgggagcttgttagagcacatgggttttcacgggga------tc 32999

                                                                         
Query: 250   cacaacctgaatccccaccgctgaatgatggacttttagttgatgcagccgatcaaattt 309
             |||||| || ||| |||| ||| ||||| || |||||||||||| || | || |||||||
Sbjct: 32998 cacaacatgtatctccacagctaaatgaagggcttttagttgattcaactgaccaaattt 32939

                                                                         
Query: 310   catatttgtctgcagattctgtaccctatatgaatgatcagatcatgtgcaatacaatga 369
             |||||||| |||| ||||||    |||  ||||||||||| |||   |||||||||||||
Sbjct: 32938 catatttggctgctgattctccgtccttcatgaatgatcaaatcccatgcaatacaatga 32879

                                                                         
Query: 370   aatctgcttcaactagtccagcatctcccctgaagcaagacgaggagcatcatgtgcata 429
             | ||||| |||||||||||||||||||||||||||||||  || || |||||||||||||
Sbjct: 32878 agtctgcctcaactagtccagcatctcccctgaagcaagcagatgaccatcatgtgcata 32819

                                               
Query: 430   tagaatctgatatgcaaaatgatgcagctgaaca 463
             |||| ||||||||| |||||||||||||||||||
Sbjct: 32818 tagattctgatatggaaaatgatgcagctgaaca 32785
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>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1329D01
          Length = 141938

 Score =  260 bits (131), Expect = 5e-66
 Identities = 283/334 (84%), Gaps = 6/334 (1%)
 Strand = Plus / Minus

                                                                         
Query: 130   agatggattacatatcccctgagagaagtctggatgggacttgtggagaccctgggcctt 189
             |||||||||||||||||||||| ||||||||||| ||| |||||||||| || || ||||
Sbjct: 19797 agatggattacatatcccctgatagaagtctggaaggggcttgtggagatcccggacctt 19738

                                                                         
Query: 190   tatttggagatcaagatggtagcttgttggagcacatggattatcatggtgaaggaatta 249
             ||||||||||||| ||||| |||||||| |||||||||| || ||| || ||      | 
Sbjct: 19737 tatttggagatcatgatgggagcttgttagagcacatgggttttcacgggga------tc 19684

                                                                         
Query: 250   cacaacctgaatccccaccgctgaatgatggacttttagttgatgcagccgatcaaattt 309
             |||||| || ||| |||| ||| ||||| || |||||||||||| || | || |||||||
Sbjct: 19683 cacaacatgtatctccacagctaaatgaagggcttttagttgattcaactgaccaaattt 19624

                                                                         
Query: 310   catatttgtctgcagattctgtaccctatatgaatgatcagatcatgtgcaatacaatga 369
             |||||||| |||| ||||||    |||  ||||||||||| |||   |||||||||||||
Sbjct: 19623 catatttggctgctgattctccgtccttcatgaatgatcaaatcccatgcaatacaatga 19564

                                                                         
Query: 370   aatctgcttcaactagtccagcatctcccctgaagcaagacgaggagcatcatgtgcata 429
             | ||||| |||||||||||||||||||||||||||||||  || || |||||||||||||
Sbjct: 19563 agtctgcctcaactagtccagcatctcccctgaagcaagcagatgaccatcatgtgcata 19504

                                               
Query: 430   tagaatctgatatgcaaaatgatgcagctgaaca 463
             |||| ||||||||| |||||||||||||||||||
Sbjct: 19503 tagattctgatatggaaaatgatgcagctgaaca 19470
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>dbj|AK101567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050F16, full
           insert sequence
          Length = 3056

 Score =  260 bits (131), Expect = 5e-66
 Identities = 283/334 (84%), Gaps = 6/334 (1%)
 Strand = Plus / Plus

                                                                       
Query: 130 agatggattacatatcccctgagagaagtctggatgggacttgtggagaccctgggcctt 189
           |||||||||||||||||||||| ||||||||||| ||| |||||||||| || || ||||
Sbjct: 297 agatggattacatatcccctgatagaagtctggaaggggcttgtggagatcccggacctt 356

                                                                       
Query: 190 tatttggagatcaagatggtagcttgttggagcacatggattatcatggtgaaggaatta 249
           ||||||||||||| ||||| |||||||| |||||||||| || ||| || ||      | 
Sbjct: 357 tatttggagatcatgatgggagcttgttagagcacatgggttttcacgggga------tc 410

                                                                       
Query: 250 cacaacctgaatccccaccgctgaatgatggacttttagttgatgcagccgatcaaattt 309
           |||||| || ||| |||| ||| ||||| || |||||||||||| || | || |||||||
Sbjct: 411 cacaacatgtatctccacagctaaatgaagggcttttagttgattcaactgaccaaattt 470

                                                                       
Query: 310 catatttgtctgcagattctgtaccctatatgaatgatcagatcatgtgcaatacaatga 369
           |||||||| |||| ||||||    |||  ||||||||||| |||   |||||||||||||
Sbjct: 471 catatttggctgctgattctccgtccttcatgaatgatcaaatcccatgcaatacaatga 530

                                                                       
Query: 370 aatctgcttcaactagtccagcatctcccctgaagcaagacgaggagcatcatgtgcata 429
           | ||||| |||||||||||||||||||||||||||||||  || || |||||||||||||
Sbjct: 531 agtctgcctcaactagtccagcatctcccctgaagcaagcagatgaccatcatgtgcata 590

                                             
Query: 430 tagaatctgatatgcaaaatgatgcagctgaaca 463
           |||| ||||||||| |||||||||||||||||||
Sbjct: 591 tagattctgatatggaaaatgatgcagctgaaca 624
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>ref|NM_193801.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1149

 Score =  256 bits (129), Expect = 7e-65
 Identities = 281/332 (84%), Gaps = 6/332 (1%)
 Strand = Plus / Plus

                                                                       
Query: 132 atggattacatatcccctgagagaagtctggatgggacttgtggagaccctgggccttta 191
           |||||||||||||||||||| ||||||||||| ||| |||||||||| || || ||||||
Sbjct: 1   atggattacatatcccctgatagaagtctggaaggggcttgtggagatcccggaccttta 60

                                                                       
Query: 192 tttggagatcaagatggtagcttgttggagcacatggattatcatggtgaaggaattaca 251
           ||||||||||| ||||| |||||||| |||||||||| || ||| || ||      | ||
Sbjct: 61  tttggagatcatgatgggagcttgttagagcacatgggttttcacgggga------tcca 114

                                                                       
Query: 252 caacctgaatccccaccgctgaatgatggacttttagttgatgcagccgatcaaatttca 311
           |||| || ||| |||| ||| ||||| || |||||||||||| || | || |||||||||
Sbjct: 115 caacatgtatctccacagctaaatgaagggcttttagttgattcaactgaccaaatttca 174

                                                                       
Query: 312 tatttgtctgcagattctgtaccctatatgaatgatcagatcatgtgcaatacaatgaaa 371
           |||||| |||| ||||||    |||  ||||||||||| |||   |||||||||||||| 
Sbjct: 175 tatttggctgctgattctccgtccttcatgaatgatcaaatcccatgcaatacaatgaag 234

                                                                       
Query: 372 tctgcttcaactagtccagcatctcccctgaagcaagacgaggagcatcatgtgcatata 431
           ||||| |||||||||||||||||||||||||||||||  || || |||||||||||||||
Sbjct: 235 tctgcctcaactagtccagcatctcccctgaagcaagcagatgaccatcatgtgcatata 294

                                           
Query: 432 gaatctgatatgcaaaatgatgcagctgaaca 463
           || ||||||||| |||||||||||||||||||
Sbjct: 295 gattctgatatggaaaatgatgcagctgaaca 326
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>ref|XM_790829.1| PREDICTED: Strongylocentrotus purpuratus similar to golgi
           associated PDZ and coiled-coil motif containing
           (LOC591258), mRNA
          Length = 549

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 232 atcatggtgaaggaattacacaacc 256
           ||||||| |||||||||||||||||
Sbjct: 259 atcatggagaaggaattacacaacc 283
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>ref|XM_790808.1| PREDICTED: Strongylocentrotus purpuratus similar to golgi
           associated PDZ and coiled-coil motif containing
           (LOC591235), mRNA
          Length = 408

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 232 atcatggtgaaggaattacacaacc 256
           ||||||| |||||||||||||||||
Sbjct: 85  atcatggagaaggaattacacaacc 109
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>gb|L00113.1|RATELAI2 Rat elastase I gene, exons 3 and 4
          Length = 891

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 1   aggcttcccttctctctccag 21
           |||||||||||||||||||||
Sbjct: 466 aggcttcccttctctctccag 486
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>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete
             sequence
          Length = 139614

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 300   gatcaaatttcatatttgtct 320
             |||||||||||||||||||||
Sbjct: 83875 gatcaaatttcatatttgtct 83895
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 300      gatcaaatttcatatttgtct 320
                |||||||||||||||||||||
Sbjct: 18267295 gatcaaatttcatatttgtct 18267275
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 300      gatcaaatttcatatttgtct 320
                |||||||||||||||||||||
Sbjct: 18276548 gatcaaatttcatatttgtct 18276528
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>ref|XM_428279.1| PREDICTED: Gallus gallus similar to Gene model 672, (NCBI)
           (LOC430727), partial mRNA
          Length = 3140

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 552 cttcctccagagcttcatgaaagc 575
           ||||||||||||||||| ||||||
Sbjct: 692 cttcctccagagcttcaggaaagc 669
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>gb|DQ366713.1| Uncultured Prochlorococcus marinus clone ASNC1430 genomic sequence
          Length = 38037

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   ctgatatgcaaaatgatgca 455
             ||||||||||||||||||||
Sbjct: 17406 ctgatatgcaaaatgatgca 17387
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>emb|AL391054.10| Human DNA sequence from clone RP1-228J4 on chromosome 6 Contains a
            ubiquinol-cytochrome c reductase, Rieske iron-sulfur
            polypeptide 1 (UQCRFS1) pseudogene, complete sequence
          Length = 20295

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 351  atcatgtgcaatacaatgaaatct 374
            |||||||||| |||||||||||||
Sbjct: 9657 atcatgtgcattacaatgaaatct 9634
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>emb|AL355604.11| Human DNA sequence from clone RP11-404E6 on chromosome 9 Contains a
             pseudogene similar to part of dipeptidylpeptidase 3
             (DPP3), complete sequence
          Length = 183010

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   tatgcaaaatgatgcagctg 459
             ||||||||||||||||||||
Sbjct: 80261 tatgcaaaatgatgcagctg 80242
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>emb|AL031588.1|HS1163J1 Human DNA sequence from clone RP5-1163J1 on chromosome 22q13.2-13.33,
             complete sequence
          Length = 127168

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 396   cccctgaagcaagacgaggagcat 419
             ||||||||||| ||||||||||||
Sbjct: 75304 cccctgaagcaggacgaggagcat 75327
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>emb|AL662843.11| Mouse DNA sequence from clone RP23-411E22 on chromosome 11 Contains the
              3' end of the Col23a1 gene for procollagen (type XXIII,
              alpha 1), the 5' end of a novel gene and a CpG island,
              complete sequence
          Length = 155917

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      cttcccttctctctccaggg 23
              ||||||||||||||||||||
Sbjct: 112136 cttcccttctctctccaggg 112117
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>gb|AF448221.1| Homo sapiens 5-methylaminomethyl-2-thiouridylate-methyltransferase
            gene, complete cds
          Length = 24500

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 396  cccctgaagcaagacgaggagcat 419
            ||||||||||| ||||||||||||
Sbjct: 4303 cccctgaagcaggacgaggagcat 4326
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>dbj|AK093743.1| Homo sapiens cDNA FLJ36424 fis, clone THYMU2011390, highly similar to
            PROBABLE TRNA
          Length = 2653

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 396  cccctgaagcaagacgaggagcat 419
            ||||||||||| ||||||||||||
Sbjct: 1311 cccctgaagcaggacgaggagcat 1288
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>gb|AC024093.46| Homo sapiens 12 BAC RP11-791I2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 148869

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   gattatcatggtgaaggaat 247
             ||||||||||||||||||||
Sbjct: 45455 gattatcatggtgaaggaat 45436
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 414      gagcatcatgtgcatataga 433
                ||||||||||||||||||||
Sbjct: 17402582 gagcatcatgtgcatataga 17402563
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>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0040H05
          Length = 172623

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 414   gagcatcatgtgcatataga 433
             ||||||||||||||||||||
Sbjct: 14579 gagcatcatgtgcatataga 14560
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>dbj|BS000040.1| Pan troglodytes chromosome 22 clone:PTB-075B06, map 22, complete
             sequences
          Length = 172697

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   atatgaatgatcagatcatg 356
             ||||||||||||||||||||
Sbjct: 22085 atatgaatgatcagatcatg 22066
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>dbj|AK000212.1| Homo sapiens cDNA FLJ20205 fis, clone COLF1506
          Length = 1990

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 396 cccctgaagcaagacgaggagcat 419
           ||||||||||| ||||||||||||
Sbjct: 118 cccctgaagcaggacgaggagcat 95
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>emb|BX897712.12| Zebrafish DNA sequence from clone CH211-146A9 in linkage group 4,
            complete sequence
          Length = 119220

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  tcctccagagcttcatgaaa 573
            ||||||||||||||||||||
Sbjct: 9764 tcctccagagcttcatgaaa 9783
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>gb|AC145932.3| Gallus gallus BAC clone CH261-37K10 from chromosome unknown, complete
             sequence
          Length = 189873

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 520   tgcatcagaatacagaagtg 539
             ||||||||||||||||||||
Sbjct: 57348 tgcatcagaatacagaagtg 57329
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>emb|AL672247.8| Mouse DNA sequence from clone RP23-95I19 on chromosome X, complete
             sequence
          Length = 224241

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   gatcatgtgcaatacaatga 369
             ||||||||||||||||||||
Sbjct: 38050 gatcatgtgcaatacaatga 38069


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,435,510
Number of Sequences: 3902068
Number of extensions: 5435510
Number of successful extensions: 104446
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104272
Number of HSP's gapped (non-prelim): 168
length of query: 602
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 579
effective length of database: 17,143,297,704
effective search space: 9925969370616
effective search space used: 9925969370616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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