>TP53B_MOUSE (P70399) Tumor suppressor p53-binding protein 1 (p53-binding protein|
            1) (p53BP1) (53BP1)
          Length = 1957

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +2

Query: 287  SPGDYHAVSPRFFGAPTQHHSTGSWPVRCSYGSSSDGDGAPPANFDASGEEFVD 448
            S GD   +S     A + HH++    +   + S S G GA P    ASG E  D
Sbjct: 1280 SSGDLGDISSFSSKASSSHHTSSGTSLSAIHSSGSSGRGAGPLKGKASGTEAAD 1333

>Y159_METJA (Q57623) Hypothetical protein MJ0159|
          Length = 542

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +2

Query: 380 GSSSDGDGAPPANFDASGEEFVD--SSVMEAVELRCV 484
           G   +G+G  PANF   G EF++   +++E  EL+C+
Sbjct: 214 GIIENGEGYLPANFRYFGVEFLERFETILEIDELKCI 250

>YNR6_YEAST (P53882) Hypothetical 67.4 kDa protein in RPS3-PSD1 intergenic|
           region
          Length = 636

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -1

Query: 522 FLPSRILITKPSDTHLSSTASMTLESTNSSPLASKFAGGAPSPS 391
           F PS   +  PS T+LSS ++ + + + +S L+S +     SPS
Sbjct: 199 FSPSTPTVISPSYTYLSSISATSFQISTTSELSSSWFSTISSPS 242


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,925,992
Number of Sequences: 219361
Number of extensions: 1561411
Number of successful extensions: 4461
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4459
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)