ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal26p03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 862 bits (435), Expect = 0.0 Identities = 467/475 (98%), Gaps = 2/475 (0%) Strand = Plus / Plus Query: 1 caagagtat-aagagcgtggttatttgtgttct-atattgggtttagttctggagcaggt 58 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 55 caagagtattaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggt 114 Query: 59 ccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctg 118 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115 ccaagtagaagccaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctg 174 Query: 119 ccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataag 178 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175 ccgtttcgctggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataag 234 Query: 179 cggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggtgaacc 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235 cggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggtgaacc 294 Query: 239 aaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgacaacatggacaa 298 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 295 aaatgcgactgagtactgcacaattggatgccggacttccgtctgtgacaacatggacaa 354 Query: 299 tgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 tgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccg 414 Query: 359 tttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggca 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 tttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggca 474 Query: 419 tgatttctatggccaaggtcgttttgtcattttctagtcaacaatcttgatacca 473 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 475 tgatttctatggccaaggtcgttttgtcattttctgttcaacaatcttgatacca 529 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 507 agttatgtatttctgttttttccctcgttccaat 540 |||||||||||||||||||||||||||||||||| Sbjct: 559 agttatgtatttctgttttttccctcgttccaat 592 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 471 ccaaggtcgttttgtcattttctgt 495 ||||||||||||||||||||||||| Sbjct: 487 ccaaggtcgttttgtcattttctgt 511 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 tttctgtaatgatggtgaagt 509 ||||||||||||||||||||| Sbjct: 415 tttctgtaatgatggtgaagt 435
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 862 bits (435), Expect = 0.0 Identities = 467/475 (98%), Gaps = 2/475 (0%) Strand = Plus / Plus Query: 1 caagagtat-aagagcgtggttatttgtgttct-atattgggtttagttctggagcaggt 58 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 55 caagagtattaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggt 114 Query: 59 ccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctg 118 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115 ccaagtagaagccaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctg 174 Query: 119 ccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataag 178 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175 ccgtttcgctggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataag 234 Query: 179 cggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggtgaacc 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235 cggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggtgaacc 294 Query: 239 aaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgacaacatggacaa 298 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 295 aaatgcgactgagtactgcacaattggatgccggacttccgtctgtgacaacatggacaa 354 Query: 299 tgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 tgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccg 414 Query: 359 tttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggca 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 tttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggca 474 Query: 419 tgatttctatggccaaggtcgttttgtcattttctagtcaacaatcttgatacca 473 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 475 tgatttctatggccaaggtcgttttgtcattttctgttcaacaatcttgatacca 529 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 507 agttatgtatttctgttttttccctcgttccaat 540 |||||||||||||||||||||||||||||||||| Sbjct: 559 agttatgtatttctgttttttccctcgttccaat 592 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 471 ccaaggtcgttttgtcattttctgt 495 ||||||||||||||||||||||||| Sbjct: 487 ccaaggtcgttttgtcattttctgt 511 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 tttctgtaatgatggtgaagt 509 ||||||||||||||||||||| Sbjct: 415 tttctgtaatgatggtgaagt 435
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 862 bits (435), Expect = 0.0 Identities = 467/475 (98%), Gaps = 2/475 (0%) Strand = Plus / Plus Query: 1 caagagtat-aagagcgtggttatttgtgttct-atattgggtttagttctggagcaggt 58 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 55 caagagtattaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggt 114 Query: 59 ccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctg 118 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115 ccaagtagaagccaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctg 174 Query: 119 ccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataag 178 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175 ccgtttcgctggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataag 234 Query: 179 cggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggtgaacc 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235 cggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggtgaacc 294 Query: 239 aaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgacaacatggacaa 298 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 295 aaatgcgactgagtactgcacaattggatgccggacttccgtctgtgacaacatggacaa 354 Query: 299 tgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 tgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccg 414 Query: 359 tttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggca 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 tttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggca 474 Query: 419 tgatttctatggccaaggtcgttttgtcattttctagtcaacaatcttgatacca 473 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 475 tgatttctatggccaaggtcgttttgtcattttctgttcaacaatcttgatacca 529 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 471 ccaaggtcgttttgtcattttctgt 495 ||||||||||||||||||||||||| Sbjct: 487 ccaaggtcgttttgtcattttctgt 511 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 tttctgtaatgatggtgaagt 509 ||||||||||||||||||||| Sbjct: 415 tttctgtaatgatggtgaagt 435
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 848 bits (428), Expect = 0.0 Identities = 450/456 (98%), Gaps = 1/456 (0%) Strand = Plus / Plus Query: 19 gttatttgtgttct-atattgggtttagttctggagcaggtccaagtagaaggcaagagt 77 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaaggcaagagt 60 Query: 78 tgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgccggtggttcc 137 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 61 tgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgctggtggttcc 120 Query: 138 cgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagg 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagg 180 Query: 198 gactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgactgagtactgc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgactgagtactgc 240 Query: 258 acaattggatgcaggacttccgtttgtgacaacatggacaatgtttcccgtggccaagag 317 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 241 acaattggatgcaggacttccgtctgtgacaacatggacaatgtttcccgtggccaagag 300 Query: 318 atgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 atgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgaa 360 Query: 378 gtcattcagtctgttgaagcctaatcatgccttcttgggcatgatttctatggccaaggt 437 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gtcattcagtctcttgaagcctaatcatgccttcttgggcatgatttctatggccaaggt 420 Query: 438 cgttttgtcattttctagtcaacaatcttgatacca 473 |||||||||||||||| |||||||||||||||||| Sbjct: 421 cgttttgtcattttctgttcaacaatcttgatacca 456 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 507 agttatgtatttctgttttttccctcgttccaat 540 |||||||||||||||||||||||||||||||||| Sbjct: 486 agttatgtatttctgttttttccctcgttccaat 519 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 471 ccaaggtcgttttgtcattttctgt 495 ||||||||||||||||||||||||| Sbjct: 414 ccaaggtcgttttgtcattttctgt 438 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 tttctgtaatgatggtgaagt 509 ||||||||||||||||||||| Sbjct: 342 tttctgtaatgatggtgaagt 362
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 743 bits (375), Expect = 0.0 Identities = 398/403 (98%), Gaps = 2/403 (0%) Strand = Plus / Plus Query: 1 caagagtat-aagagcgtggttatttgtgttct-atattgggtttagttctggagcaggt 58 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 12 caagagtattaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggt 71 Query: 59 ccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctg 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72 ccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctg 131 Query: 119 ccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataag 178 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132 ccatttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataag 191 Query: 179 cggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggtgaacc 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 cggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggtgaacc 251 Query: 239 aaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgacaacatggacaa 298 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 252 aaatgcgactgagtactgcacaattggatgcaggacttccgtctgtgacaacatggacaa 311 Query: 299 tgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 tgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccg 371 Query: 359 tttctgtaatgatggtgaagtcattcagtctgttgaagcctaa 401 |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 372 tttctgtaatgatggtgatgtcattcagtctgttgaagcctaa 414
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 686 bits (346), Expect = 0.0 Identities = 364/370 (98%) Strand = Plus / Plus Query: 104 ctgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtgg 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtgg 60 Query: 164 ttgtaaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccc 223 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 61 ttgtaaaatcataagcggcccaacctgtcctagggactatcctaagctgaatcttctccc 120 Query: 224 tgaatccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttg 283 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 121 tgaatccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtctg 180 Query: 284 tgacaacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcag 343 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgacaacctggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcag 240 Query: 344 caacgcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatc 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 caacgcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatc 300 Query: 404 atgccttcttgggcatgatttctatggccaaggtcgttttgtcattttctagtcaacaat 463 |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 301 atgccttcttgggcatgatttctatggccaaggtcgttttttcattttctgttcaacaat 360 Query: 464 cttgatacca 473 |||||||||| Sbjct: 361 cttgatacca 370 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 507 agttatgtatttctgttttttccctcgttccaat 540 |||||||||||||||||||||||||||||||||| Sbjct: 400 agttatgtatttctgttttttccctcgttccaat 433 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 471 ccaaggtcgttttgtcattttctgt 495 ||||||||||||| ||||||||||| Sbjct: 328 ccaaggtcgttttttcattttctgt 352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 tttctgtaatgatggtgaagt 509 ||||||||||||||||||||| Sbjct: 256 tttctgtaatgatggtgaagt 276
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 545 bits (275), Expect = e-152 Identities = 427/475 (89%), Gaps = 2/475 (0%) Strand = Plus / Plus Query: 1 caagagtat-aagagcgtggttatttgtgttct-atattgggtttagttctggagcaggt 58 ||||||||| ||||| ||||| ||||||||||| ||| |||||||||||||||||||||| Sbjct: 37 caagagtattaagagtgtggtcatttgtgttctcatactgggtttagttctggagcaggt 96 Query: 59 ccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctg 118 ||| || || || || |||||||||||| ||||| | ||||||||||||||| | || Sbjct: 97 ccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgctacaacacttg 156 Query: 119 ccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataag 178 ||||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||| Sbjct: 157 ccgtttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgtaaaatcataag 216 Query: 179 cggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggtgaacc 238 || |||| ||| ||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 217 tggtccaaaatgccctagtgactatcctaaacttaatcttctccctgaatccggtgaacc 276 Query: 239 aaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgacaacatggacaa 298 | ||| ||| |||||||||| ||||||||||||| ||| || ||||||||||||||||| Sbjct: 277 agatgtcactcagtactgcaccattggatgcaggaattctgtctgtgacaacatggacaa 336 Query: 299 tgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccg 358 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 tgttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccg 396 Query: 359 tttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggca 418 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 397 tttttgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgccttcttgtgca 456 Query: 419 tgatttctatggccaaggtcgttttgtcattttctagtcaacaatcttgatacca 473 |||||||||||||||||||||| |||||||||| | | || ||||||||||||| Sbjct: 457 tgatttctatggccaaggtcgtattgtcattttgtcttgaataatcttgatacca 511
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 537 bits (271), Expect = e-149 Identities = 426/475 (89%), Gaps = 2/475 (0%) Strand = Plus / Plus Query: 1 caagagtat-aagagcgtggttatttgtgttct-atattgggtttagttctggagcaggt 58 ||||||||| ||||| ||||| ||||||||||| ||| |||||||||||||||||||||| Sbjct: 30 caagagtattaagagtgtggtcatttgtgttctcatactgggtttagttctggagcaggt 89 Query: 59 ccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctg 118 ||| || || || || |||||||||||| ||||| | ||||||||||||||| | || Sbjct: 90 ccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgctacaacacttg 149 Query: 119 ccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataag 178 || |||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||| Sbjct: 150 ccatttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgtaaaatcataag 209 Query: 179 cggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggtgaacc 238 || |||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 210 tggtccaaaatgccctagtgactatcctaaactgaatcttctccctgaatccggtgaacc 269 Query: 239 aaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgacaacatggacaa 298 | ||| || |||||||||| ||||||||||||| ||| || ||||||||||||||||| Sbjct: 270 agatgtcacgcagtactgcaccattggatgcaggaattctgtctgtgacaacatggacaa 329 Query: 299 tgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccg 358 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 330 tgttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccg 389 Query: 359 tttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggca 418 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 390 tttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgccttcttgtgca 449 Query: 419 tgatttctatggccaaggtcgttttgtcattttctagtcaacaatcttgatacca 473 ||||||||||||||| |||||| |||||||||| | | || ||||||||||||| Sbjct: 450 tgatttctatggccatggtcgtattgtcattttgtcttgaataatcttgatacca 504
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 426 bits (215), Expect = e-116 Identities = 232/235 (98%), Gaps = 2/235 (0%) Strand = Plus / Plus Query: 1 caagagtat-aagagcgtggttatttgtgttct-atattgggtttagttctggagcaggt 58 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1563 caagagtattaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggt 1622 Query: 59 ccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctg 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1623 ccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctg 1682 Query: 119 ccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataag 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1683 ccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataag 1742 Query: 179 cggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggt 233 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1743 cggcccaacctgtcctagggactatcctaagctgaatcttctccctgaatccggt 1797 Score = 321 bits (162), Expect = 1e-84 Identities = 171/174 (98%) Strand = Plus / Plus Query: 300 gtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 359 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2054 gtttcccgtggccaagagatgaaatttgacatgggactctgcagcaacgcatgtgcccgt 2113 Query: 360 ttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcat 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2114 ttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcat 2173 Query: 420 gatttctatggccaaggtcgttttgtcattttctagtcaacaatcttgatacca 473 |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2174 gatttctatggccaaggtcgttttgtcattttctgttcaacaatcttgatacca 2227 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Plus Query: 231 ggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgacaac 290 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1894 ggtgaaccaaatgtgactgagtactgcacaattggatgcaggacttccgtttgtgacaac 1953 Query: 291 atggacaatg 300 |||||||||| Sbjct: 1954 atggacaatg 1963 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 471 ccaaggtcgttttgtcattttctgt 495 ||||||||||||||||||||||||| Sbjct: 2185 ccaaggtcgttttgtcattttctgt 2209 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 tttctgtaatgatggtgaagt 509 ||||||||||||||||||||| Sbjct: 2113 tttctgtaatgatggtgaagt 2133
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 410 bits (207), Expect = e-111 Identities = 300/331 (90%) Strand = Plus / Plus Query: 143 agtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagggacta 202 |||||||||| ||||||| |||||||||||||||| || |||| ||| ||||| ||||| Sbjct: 1 agtctgcgcaggtgcttgtcgttgtaaaatcataagtggtccaaaatgccctagtgacta 60 Query: 203 tcctaagctgaatcttctccctgaatccggtgaaccaaatgcgactgagtactgcacaat 262 |||||| || |||||||||||||||||||||||||| ||| ||| |||||||||| || Sbjct: 61 tcctaaacttaatcttctccctgaatccggtgaacccgatgtcactcagtactgcaccat 120 Query: 263 tggatgcaggacttccgtttgtgacaacatggacaatgtttcccgtggccaagagatgaa 322 ||||||||||| ||| || |||||||||||||||||||||| || ||||||||||||||| Sbjct: 121 tggatgcaggaattctgtctgtgacaacatggacaatgttttccatggccaagagatgaa 180 Query: 323 attcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgaagtcat 382 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 181 attcgacatgggactctgcagcaacgcatgtgcccgtttttgtaatgatggtgcagtcat 240 Query: 383 tcagtctgttgaagcctaatcatgccttcttgggcatgatttctatggccaaggtcgttt 442 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 241 tcagtctgttgaatcctaatcatgccttcttgtgcatgatttctatggccaaggtcgtat 300 Query: 443 tgtcattttctagtcaacaatcttgatacca 473 ||||||||| | | || ||||||||||||| Sbjct: 301 tgtcattttgtcttgaataatcttgatacca 331
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 274 bits (138), Expect = 3e-70 Identities = 165/174 (94%) Strand = Plus / Plus Query: 300 gtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2031 gttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 2090 Query: 360 ttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcat 419 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2091 ttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgccttcttgtgcat 2150 Query: 420 gatttctatggccaaggtcgttttgtcattttctagtcaacaatcttgatacca 473 ||||||||||||||||||||| |||||||||| | | || ||||||||||||| Sbjct: 2151 gatttctatggccaaggtcgtattgtcattttgtcttgaataatcttgatacca 2204 Score = 212 bits (107), Expect = 9e-52 Identities = 205/235 (87%), Gaps = 2/235 (0%) Strand = Plus / Plus Query: 1 caagagtat-aagagcgtggttatttgtgttct-atattgggtttagttctggagcaggt 58 ||||||||| ||||| ||||| ||||||||||| ||| ||| |||||||||||||||||| Sbjct: 1542 caagagtattaagagtgtggtcatttgtgttctcatactggttttagttctggagcaggt 1601 Query: 59 ccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctg 118 ||| || || || || |||||||||||| ||||| | ||||||||||||||| | || Sbjct: 1602 ccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgctacaacacttg 1661 Query: 119 ccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataag 178 ||||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||| Sbjct: 1662 ccgtttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgtaaaatcataag 1721 Query: 179 cggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggt 233 || |||| ||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 1722 tggtccaaaatgccctagtgactatcctaaactgaatcttctccctgaatccggt 1776 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 231 ggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgacaac 290 ||||||||| ||| ||| |||||||||| |||||||||| || ||| || ||||||||| Sbjct: 1868 ggtgaaccagatgtcactcagtactgcaccattggatgcacgaattctgtctgtgacaac 1927 Query: 291 atggacaatg 300 |||||||||| Sbjct: 1928 atggacaatg 1937
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 194 bits (98), Expect = 2e-46 Identities = 325/400 (81%), Gaps = 3/400 (0%) Strand = Plus / Plus Query: 39 ggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggc 98 ||||||||||||| ||||||||| ||||| || |||||||||||| || ||| | | Sbjct: 100 ggtttagttctggggcaggtccaggtagagggaaagagttgctgcccgagcacatctgca 159 Query: 99 agaaactgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgct 158 ||||||||||| |||| ||||||||| ||||| |||||| ||| ||||||| || | Sbjct: 160 agaaactgctataacgtctgccgtttaaccggtacttcccggccacgctgcgcatctctt 219 Query: 159 tgtggttgtaaaatcataagcggcccaacatgtcctagggactatcctaagctgaatctt 218 ||||| ||||||||| || ||| |||||||||| | |||| |||| ||| ||||| Sbjct: 220 tgtggatgtaaaatcgtagacgg---aacatgtcctgatggctattctaaactgcatctt 276 Query: 219 ctccctgaatccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttcc 278 || | ||||||||||||||| ||| |||||||||||||| || ||||||| ||||||| Sbjct: 277 ctacttgaatccggtgaaccggatgtcactgagtactgcaccataggatgcatgacttcc 336 Query: 279 gtttgtgacaacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactc 338 |||||||||||||||||||||||| | |||||||||||||||| |||||||| |||| Sbjct: 337 gtttgtgacaacatggacaatgttattcatggccaagagatgaaaatcgacatgctactc 396 Query: 339 tgcagcaacgcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcc 398 |||| ||| | ||||| ||||||||||| | |||| ||||||| ||| | |||| Sbjct: 397 tgcaacaaagaatgtgttcgtttctgtaacaagggtgccgtcattccatctttccaagct 456 Query: 399 taatcatgccttcttgggcatgatttctatggccaaggtc 438 ||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 457 taatcatgcactcttgtgcatgatttctttggccgaggtc 496
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 174 bits (88), Expect = 2e-40 Identities = 214/256 (83%) Strand = Plus / Plus Query: 37 tgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgg 96 ||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| Sbjct: 131 tgggtttagttctggagcaggtccaggtagagggcaagagttgctgcaagagcacgacgg 190 Query: 97 gcagaaactgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactg 156 | |||||||||||| | ||||||||| || |||| | | || |||||||||||| | Sbjct: 191 caataaactgctacaatgtctgccgtttagctggtgctccgcgcccagtctgcgcaggtc 250 Query: 157 cttgtggttgtaaaatcataagcggcccaacatgtcctagggactatcctaagctgaatc 216 | |||||||||||| || || || |||| ||||| || || | ||||| | | ||| Sbjct: 251 catgtggttgtaaactcttagacgttacaacttgtccaagtgattggcctaaacagcatc 310 Query: 217 ttctccctgaatccggtgaaccaaatgcgactgagtactgcacaattggatgcaggactt 276 ||||| |||||| ||||||| || |||| ||||||||||||| |||||||||| ||||| Sbjct: 311 ttctctctgaatacggtgaagcagatgcagctgagtactgcactattggatgcatgactt 370 Query: 277 ccgtttgtgacaacat 292 |||||||||||||||| Sbjct: 371 ccgtttgtgacaacat 386 Score = 79.8 bits (40), Expect = 8e-12 Identities = 118/144 (81%) Strand = Plus / Plus Query: 306 cgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgt 365 ||||||||||||||||| |||||||| | |||||| ||||||||||| |||||||||| Sbjct: 415 cgtggccaagagatgaacatcgacatgcaagtctgcaacaacgcatgtgtccgtttctgt 474 Query: 366 aatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcatgatttc 425 || | |||| |||| || ||||| | |||||||||||| ||| | || | ||||| Sbjct: 475 aacaagggtgccgtcaatccatctgtcggggcctaatcatgcactctcgtgccttatttc 534 Query: 426 tatggccaaggtcgttttgtcatt 449 |||||||| |||||||||| |||| Sbjct: 535 tatggccatggtcgttttgccatt 558
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 101 bits (51), Expect = 2e-18 Identities = 94/107 (87%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 9 taagagcgtggttatttgtgttcta-tattgggtttagttctggagcaggtccaagtaga 67 |||||| ||||| ||||||||||| ||||||| ||||||||||||| ||||||||||| Sbjct: 43 taagagtgtggtcatttgtgttcttgtattggggatagttctggagcatgtccaagtaga 102 Query: 68 aggcaagagttgctgcaagaacacgacgggcagaaactgctacaacg 114 || ||||||||||||||| |||| |||| |||||||||||||||| Sbjct: 103 gggaaagagttgctgcaaggacaccacggcaagaaactgctacaacg 149
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene Length = 892 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 45 gttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaac 104 |||||||| ||||| |||||||||||||||||||||||||||| ||| || |||||| Sbjct: 64 gttctggaacaggtgcaagtagaaggcaagagttgctgcaagagcaccctaggaagaaac 123 Query: 105 tgctacaac 113 ||||||||| Sbjct: 124 tgctacaac 132
>emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin Length = 641 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 45 gttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaac 104 |||||||| ||||| ||||||||||||||||||||||||| || ||| ||| |||||| Sbjct: 121 gttctggaacaggtgcaagtagaaggcaagagttgctgcaggaccaccctgggaagaaac 180 Query: 105 tgctacaac 113 ||||||||| Sbjct: 181 tgctacaac 189
>emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene Length = 901 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 45 gttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaac 104 |||||||| ||||| ||||||||||||||||||||||||| || ||| ||| |||||| Sbjct: 64 gttctggaacaggtgcaagtagaaggcaagagttgctgcaggaccaccctgggaagaaac 123 Query: 105 tgctacaac 113 ||||||||| Sbjct: 124 tgctacaac 132
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds Length = 673 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 45 gttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaac 104 |||||||| ||||| |||||||||||||||||||||||||||| ||| || |||||| Sbjct: 72 gttctggaacaggtgcaagtagaaggcaagagttgctgcaagagcaccctaggaagaaac 131 Query: 105 tgctacaac 113 ||||||||| Sbjct: 132 tgctacaac 140
>dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3, complete cds Length = 915 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 45 gttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaac 104 |||||||| ||||| ||||||||||||||||||||||||| || ||| ||| |||||| Sbjct: 109 gttctggaacaggtgcaagtagaaggcaagagttgctgcaggaccaccctgggaagaaac 168 Query: 105 tgctacaac 113 ||||||||| Sbjct: 169 tgctacaac 177
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds Length = 677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 34 tattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaag 86 ||||||| ||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 70 tattggggatagttctggagcaggtccaagtagagggaaagagttgctgcaag 122
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 45 gttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaac 104 |||||||| ||||| ||||||||||| |||||||||||||||| ||| || |||||| Sbjct: 64 gttctggaacaggtgcaagtagaaggaaagagttgctgcaagagcaccctaggaagaaac 123 Query: 105 tgctacaac 113 ||||||||| Sbjct: 124 tgctacaac 132
>emb|X05901.1|HVTH1AR Barley mRNA for toxin alpha-hordothionin Length = 569 Score = 60.0 bits (30), Expect = 8e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 32 tatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaacac 91 |||| |||| || ||||| || ||||| ||||||||||||||||||||||||| || ||| Sbjct: 26 tatactggggttggttctcgaacaggtgcaagtagaaggcaagagttgctgcaggagcac 85 Query: 92 gacgggcagaaactgctacaac 113 || ||||||||||||||| Sbjct: 86 cctaggaagaaactgctacaac 107
>gb|M23080.1|BLYHORA Hordeum vulgare alpha-hordothionin (Hth-1) gene, complete cds Length = 1805 Score = 60.0 bits (30), Expect = 8e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 32 tatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaacac 91 |||| |||| || ||||| || ||||| ||||||||||||||||||||||||| || ||| Sbjct: 404 tatactggggttggttctcgaacaggtgcaagtagaaggcaagagttgctgcaggagcac 463 Query: 92 gacgggcagaaactgctacaac 113 || ||||||||||||||| Sbjct: 464 cctaggaagaaactgctacaac 485
>emb|Z13008.1|HVBHORD H.vulgare mRNA for beta-hordothionin Length = 535 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 45 gttctggagcaggtccaagtagaaggcaagagttgctgca 84 |||||||| || || ||||||||||||||||||||||||| Sbjct: 88 gttctggaacatgtgcaagtagaaggcaagagttgctgca 127
>emb|X96446.1|TACSPUR1B T.aestivum Pur-B1 gene, cultivar Chinese Spring Length = 888 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 45 gttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaac 104 |||||||| ||| | || |||||||||||||| ||||||| || ||| ||| |||||| Sbjct: 64 gttctggaacagctgcaggtagaaggcaagagctgctgcaggagcaccctgggaagaaac 123 Query: 105 tgctacaac 113 ||||||||| Sbjct: 124 tgctacaac 132
>emb|X70666.1|TAPURD1A T.aestivum mRNA for alpha2-purothionin Length = 567 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 45 gttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaac 104 |||||||| ||| | || |||||||||||||| ||||||| || ||| ||| |||||| Sbjct: 23 gttctggaacagctgcaggtagaaggcaagagctgctgcaggagcaccctgggaagaaac 82 Query: 105 tgctacaac 113 ||||||||| Sbjct: 83 tgctacaac 91
>gb|AC149153.3| Xenopus tropicalis clone ISB-221D20, complete sequence Length = 58609 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 agttatgtatttctgtttttt 527 ||||||||||||||||||||| Sbjct: 8210 agttatgtatttctgtttttt 8230
>gb|AC004927.2| Homo sapiens PAC clone RP5-910I17 from 7, complete sequence Length = 80105 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 tgtcattttctgtaatgatgg 503 ||||||||||||||||||||| Sbjct: 54835 tgtcattttctgtaatgatgg 54815
>gb|AC147271.3| Pan troglodytes BAC clone RP43-121F15 from chromosome 7, complete sequence Length = 180569 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 tgtcattttctgtaatgatgg 503 ||||||||||||||||||||| Sbjct: 5612 tgtcattttctgtaatgatgg 5632
>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence Length = 209156 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 274 cttccgtttgtgacaacatggacaa 298 ||||| ||||||||||||||||||| Sbjct: 87262 cttccatttgtgacaacatggacaa 87238
>gb|AC115728.11| Mus musculus chromosome 5, clone RP23-31J24, complete sequence Length = 211351 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 ttgtcattttctgtaatgat 501 |||||||||||||||||||| Sbjct: 160820 ttgtcattttctgtaatgat 160801
>ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on chromosome 15 Length = 1523 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 agagttgctgcaagaacacg 92 |||||||||||||||||||| Sbjct: 966 agagttgctgcaagaacacg 947
>gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, complete sequence Length = 173428 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 agagttgctgcaagaacacg 92 |||||||||||||||||||| Sbjct: 54190 agagttgctgcaagaacacg 54209
>emb|AL646095.27| Mouse DNA sequence from clone RP23-17P18 on chromosome 11 Contains the 3' end of the Asb3 gene for ankyrin repeat and SOCS box-containing protein 3 and two zinc finger protein pseudogenes, complete sequence Length = 173655 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ttttgtcattttctgtaatg 499 |||||||||||||||||||| Sbjct: 18616 ttttgtcattttctgtaatg 18597
>gb|U78721.3| Arabidopsis thaliana chromosome 2 clone T1B8 map TEn5, complete sequence Length = 114144 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 17 tggttatttgtgttctatattgggttta 44 |||| |||||||||||| |||||||||| Sbjct: 10999 tggtaatttgtgttctaaattgggttta 11026
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 agtcaacaatcttgatacca 473 |||||||||||||||||||| Sbjct: 1797761 agtcaacaatcttgatacca 1797742
>gb|AC154857.2| Mus musculus BAC clone RP23-16K21 from chromosome 13, complete sequence Length = 214859 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 ttgtcattttctgtaatgat 501 |||||||||||||||||||| Sbjct: 35339 ttgtcattttctgtaatgat 35358
>gb|AC008498.3|AC008498 Homo sapiens chromosome 5 clone CTC-436P18, complete sequence Length = 217898 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gttatgtatttctgtttttt 527 |||||||||||||||||||| Sbjct: 161153 gttatgtatttctgtttttt 161134
>dbj|BS000023.1| Pan troglodytes chromosome 22 clone:PTB-018G23, map 22, complete sequences Length = 135513 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gtttgtgacaacatggacaa 298 |||||||||||||||||||| Sbjct: 53200 gtttgtgacaacatggacaa 53181
>gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, complete sequence Length = 190133 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 ttgtcattttctgtaatgat 501 |||||||||||||||||||| Sbjct: 168957 ttgtcattttctgtaatgat 168976
>gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complete sequence Length = 227073 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gttatgtatttctgtttttt 527 |||||||||||||||||||| Sbjct: 101083 gttatgtatttctgtttttt 101064
>gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338) gene, complete cds Length = 1047 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 413 tgggcatgatttctatggccaagg 436 ||||||||||||| |||||||||| Sbjct: 839 tgggcatgatttcaatggccaagg 862 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,699,062 Number of Sequences: 3902068 Number of extensions: 4699062 Number of successful extensions: 90324 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 42 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90207 Number of HSP's gapped (non-prelim): 98 length of query: 540 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 517 effective length of database: 17,143,297,704 effective search space: 8863084912968 effective search space used: 8863084912968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
