| Clone Name | baal26p02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB214183.1| Hordeum vulgare HvYS1 mRNA for iron-phytosiderophore transporter, complete cds Length = 2430 Score = 950 bits (479), Expect = 0.0 Identities = 482/483 (99%) Strand = Plus / Plus Query: 2 tgccttgtttagcgttcttgcagtggttacaataccagtaatgttcaaacaagtgaagtg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1371 tgccttgtttagcgttcttgcagtggttacaataccagtaatgttcaaacaagtgaagtg 1430 Query: 62 gtactatgttgttatagcctatgtcgttgcccccatgcttggatttgccaattcatacgg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1431 gtactatgttgttatagcctatgtcgttgcccccatgcttggatttgccaattcatacgg 1490 Query: 122 gacagggcttaccgacatcaacatgggctataactatggcaagatcgctctctttgtctt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1491 gacagggcttaccgacatcaacatgggctataactatggcaagatcgctctctttgtctt 1550 Query: 182 tgcgggatgggccggtaaagagaatggtgtcattgccggccttgttgctggcaccttagt 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1551 tgcgggatgggccggtaaagagaatggtgtcattgccggccttgttgctggcaccttggt 1610 Query: 242 taagcagttggtgcttatctctgccgatttgatgcaagacttcaagacgagttacctcac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1611 taagcagttggtgcttatctctgccgatttgatgcaagacttcaagacgagttacctcac 1670 Query: 302 tcaaacatcaccaaaatccatgatgattgcacaagttgttggaacagccatgggttgcat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1671 tcaaacatcaccaaaatccatgatgattgcacaagttgttggaacagccatgggttgcat 1730 Query: 362 tgtctcccccctcacgttcatgctcttctacaaggcatttgatattggtaacccagatgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1731 tgtctcccccctcacgttcatgctcttctacaaggcatttgatattggtaacccagatgg 1790 Query: 422 tacttggaaggcaccttatgcactcatataccgcaatatggcaatacttggtgtggaggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1791 tacttggaaggcaccttatgcactcatataccgcaatatggcaatacttggtgtggaggg 1850 Query: 482 ctt 484 ||| Sbjct: 1851 ctt 1853
>ref|XM_467066.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2019 Score = 131 bits (66), Expect = 2e-27 Identities = 162/194 (83%) Strand = Plus / Plus Query: 97 tgcttggatttgccaattcatacgggacagggcttaccgacatcaacatgggctataact 156 |||| ||||| |||||||| ||||| ||||||| || |||||||||||||| || |||| Sbjct: 1280 tgctaggattcgccaattcctacggagcagggctcacggacatcaacatggggtacaact 1339 Query: 157 atggcaagatcgctctctttgtctttgcgggatgggccggtaaagagaatggtgtcattg 216 | ||||||||||||||||| |||||||| | ||||| || || || ||||| ||||| | Sbjct: 1340 acggcaagatcgctctcttcgtctttgcagcttgggctggcaaggacaatggcgtcatag 1399 Query: 217 ccggccttgttgctggcaccttagttaagcagttggtgcttatctctgccgatttgatgc 276 |||||||||| | ||||||| | || |||||| ||||||| ||||||||||| |||||| Sbjct: 1400 ccggccttgtggttggcaccctggtgaagcagctggtgctcgtctctgccgatctgatgc 1459 Query: 277 aagacttcaagacg 290 | || |||||||| Sbjct: 1460 acgatctcaagacg 1473
>dbj|AB190923.1| Oryza sativa (japonica cultivar-group) osysl15 mRNA for hypothetical protein, complete cds Length = 2019 Score = 131 bits (66), Expect = 2e-27 Identities = 162/194 (83%) Strand = Plus / Plus Query: 97 tgcttggatttgccaattcatacgggacagggcttaccgacatcaacatgggctataact 156 |||| ||||| |||||||| ||||| ||||||| || |||||||||||||| || |||| Sbjct: 1280 tgctaggattcgccaattcctacggagcagggctcacggacatcaacatggggtacaact 1339 Query: 157 atggcaagatcgctctctttgtctttgcgggatgggccggtaaagagaatggtgtcattg 216 | ||||||||||||||||| |||||||| | ||||| || || || ||||| ||||| | Sbjct: 1340 acggcaagatcgctctcttcgtctttgcagcttgggctggcaaggacaatggcgtcatag 1399 Query: 217 ccggccttgttgctggcaccttagttaagcagttggtgcttatctctgccgatttgatgc 276 |||||||||| | ||||||| | || |||||| ||||||| ||||||||||| |||||| Sbjct: 1400 ccggccttgtggttggcaccctggtgaagcagctggtgctcgtctctgccgatctgatgc 1459 Query: 277 aagacttcaagacg 290 | || |||||||| Sbjct: 1460 acgatctcaagacg 1473
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 131 bits (66), Expect = 2e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 97 tgcttggatttgccaattcatacgggacagggcttaccgacatcaacatgggctataact 156 |||| ||||| |||||||| ||||| ||||||| || |||||||||||||| || |||| Sbjct: 26219567 tgctaggattcgccaattcctacggagcagggctcacggacatcaacatggggtacaact 26219508 Query: 157 atggcaagatcgctctctttgtctttgcgggatgggccggtaaagagaatggtgtcattg 216 | ||||||||||||||||| |||||||| | ||||| || || || ||||| ||||| | Sbjct: 26219507 acggcaagatcgctctcttcgtctttgcagcttgggctggcaaggacaatggcgtcatag 26219448 Query: 217 ccggccttgttgctggcaccttagttaagcagttggtgcttatctctgccgatttgatgc 276 |||||||||| | ||||||| | || |||||| ||||||| ||||||||||| |||||| Sbjct: 26219447 ccggccttgtggttggcaccctggtgaagcagctggtgctcgtctctgccgatctgatgc 26219388 Query: 277 aagacttcaagacg 290 | || |||||||| Sbjct: 26219387 acgatctcaagacg 26219374 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 40 taatgttcaaacaagtgaagtggtactatgttgttatagcctatgtcgttgcccccatgc 99 |||||||| |||| ||||||||||||||||||||| |||||| ||| |||| || ||| Sbjct: 26190906 taatgttccaacaggtgaagtggtactatgttgttgtagcctttgtgcttgctcctgtgc 26190847 Query: 100 ttggatttgccaattcatacgggacagggcttaccgacatcaacatgggctataactatg 159 | ||||| ||||| | || || || ||||| || ||||| |||||| |||| ||||||| Sbjct: 26190846 tgggattctccaatgcctatggaactgggctaactgacatgaacatgagctacaactatg 26190787 Query: 160 gcaagatcgctctctttgtctttgc 184 ||||||| |||||||| ||||||| Sbjct: 26190786 gcaagattgctctcttcatctttgc 26190762 Score = 60.0 bits (30), Expect = 7e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 340 ttggaacagccatgggttgcattgtctcccccctcacgttcatgctcttctacaaggcat 399 |||| ||||||||||| ||||| || | || || || ||| ||||||||||||| |||| Sbjct: 26190606 ttggtacagccatgggctgcataatcgctccactgactttcttgctcttctacaaagcat 26190547 Query: 400 ttgatattggtaacccagatgg 421 |||||||||| ||||| ||||| Sbjct: 26190546 ttgatattgggaaccctgatgg 26190525
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 131 bits (66), Expect = 2e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 97 tgcttggatttgccaattcatacgggacagggcttaccgacatcaacatgggctataact 156 |||| ||||| |||||||| ||||| ||||||| || |||||||||||||| || |||| Sbjct: 116394 tgctaggattcgccaattcctacggagcagggctcacggacatcaacatggggtacaact 116335 Query: 157 atggcaagatcgctctctttgtctttgcgggatgggccggtaaagagaatggtgtcattg 216 | ||||||||||||||||| |||||||| | ||||| || || || ||||| ||||| | Sbjct: 116334 acggcaagatcgctctcttcgtctttgcagcttgggctggcaaggacaatggcgtcatag 116275 Query: 217 ccggccttgttgctggcaccttagttaagcagttggtgcttatctctgccgatttgatgc 276 |||||||||| | ||||||| | || |||||| ||||||| ||||||||||| |||||| Sbjct: 116274 ccggccttgtggttggcaccctggtgaagcagctggtgctcgtctctgccgatctgatgc 116215 Query: 277 aagacttcaagacg 290 | || |||||||| Sbjct: 116214 acgatctcaagacg 116201 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 40 taatgttcaaacaagtgaagtggtactatgttgttatagcctatgtcgttgcccccatgc 99 |||||||| |||| ||||||||||||||||||||| |||||| ||| |||| || ||| Sbjct: 87733 taatgttccaacaggtgaagtggtactatgttgttgtagcctttgtgcttgctcctgtgc 87674 Query: 100 ttggatttgccaattcatacgggacagggcttaccgacatcaacatgggctataactatg 159 | ||||| ||||| | || || || ||||| || ||||| |||||| |||| ||||||| Sbjct: 87673 tgggattctccaatgcctatggaactgggctaactgacatgaacatgagctacaactatg 87614 Query: 160 gcaagatcgctctctttgtctttgc 184 ||||||| |||||||| ||||||| Sbjct: 87613 gcaagattgctctcttcatctttgc 87589 Score = 60.0 bits (30), Expect = 7e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 340 ttggaacagccatgggttgcattgtctcccccctcacgttcatgctcttctacaaggcat 399 |||| ||||||||||| ||||| || | || || || ||| ||||||||||||| |||| Sbjct: 87433 ttggtacagccatgggctgcataatcgctccactgactttcttgctcttctacaaagcat 87374 Query: 400 ttgatattggtaacccagatgg 421 |||||||||| ||||| ||||| Sbjct: 87373 ttgatattgggaaccctgatgg 87352
>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0012J10 Length = 132375 Score = 131 bits (66), Expect = 2e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 97 tgcttggatttgccaattcatacgggacagggcttaccgacatcaacatgggctataact 156 |||| ||||| |||||||| ||||| ||||||| || |||||||||||||| || |||| Sbjct: 42408 tgctaggattcgccaattcctacggagcagggctcacggacatcaacatggggtacaact 42349 Query: 157 atggcaagatcgctctctttgtctttgcgggatgggccggtaaagagaatggtgtcattg 216 | ||||||||||||||||| |||||||| | ||||| || || || ||||| ||||| | Sbjct: 42348 acggcaagatcgctctcttcgtctttgcagcttgggctggcaaggacaatggcgtcatag 42289 Query: 217 ccggccttgttgctggcaccttagttaagcagttggtgcttatctctgccgatttgatgc 276 |||||||||| | ||||||| | || |||||| ||||||| ||||||||||| |||||| Sbjct: 42288 ccggccttgtggttggcaccctggtgaagcagctggtgctcgtctctgccgatctgatgc 42229 Query: 277 aagacttcaagacg 290 | || |||||||| Sbjct: 42228 acgatctcaagacg 42215 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 40 taatgttcaaacaagtgaagtggtactatgttgttatagcctatgtcgttgcccccatgc 99 |||||||| |||| ||||||||||||||||||||| |||||| ||| |||| || ||| Sbjct: 13747 taatgttccaacaggtgaagtggtactatgttgttgtagcctttgtgcttgctcctgtgc 13688 Query: 100 ttggatttgccaattcatacgggacagggcttaccgacatcaacatgggctataactatg 159 | ||||| ||||| | || || || ||||| || ||||| |||||| |||| ||||||| Sbjct: 13687 tgggattctccaatgcctatggaactgggctaactgacatgaacatgagctacaactatg 13628 Query: 160 gcaagatcgctctctttgtctttgc 184 ||||||| |||||||| ||||||| Sbjct: 13627 gcaagattgctctcttcatctttgc 13603 Score = 60.0 bits (30), Expect = 7e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 340 ttggaacagccatgggttgcattgtctcccccctcacgttcatgctcttctacaaggcat 399 |||| ||||||||||| ||||| || | || || || ||| ||||||||||||| |||| Sbjct: 13447 ttggtacagccatgggctgcataatcgctccactgactttcttgctcttctacaaagcat 13388 Query: 400 ttgatattggtaacccagatgg 421 |||||||||| ||||| ||||| Sbjct: 13387 ttgatattgggaaccctgatgg 13366
>dbj|AK063464.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-H05, full insert sequence Length = 1868 Score = 131 bits (66), Expect = 2e-27 Identities = 162/194 (83%) Strand = Plus / Plus Query: 97 tgcttggatttgccaattcatacgggacagggcttaccgacatcaacatgggctataact 156 |||| ||||| |||||||| ||||| ||||||| || |||||||||||||| || |||| Sbjct: 930 tgctaggattcgccaattcctacggagcagggctcacggacatcaacatggggtacaact 989 Query: 157 atggcaagatcgctctctttgtctttgcgggatgggccggtaaagagaatggtgtcattg 216 | ||||||||||||||||| |||||||| | ||||| || || || ||||| ||||| | Sbjct: 990 acggcaagatcgctctcttcgtctttgcagcttgggctggcaaggacaatggcgtcatag 1049 Query: 217 ccggccttgttgctggcaccttagttaagcagttggtgcttatctctgccgatttgatgc 276 |||||||||| | ||||||| | || |||||| ||||||| ||||||||||| |||||| Sbjct: 1050 ccggccttgtggttggcaccctggtgaagcagctggtgctcgtctctgccgatctgatgc 1109 Query: 277 aagacttcaagacg 290 | || |||||||| Sbjct: 1110 acgatctcaagacg 1123
>ref|XM_467063.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1950 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 40 taatgttcaaacaagtgaagtggtactatgttgttatagcctatgtcgttgcccccatgc 99 |||||||| |||| ||||||||||||||||||||| |||||| ||| |||| || ||| Sbjct: 1154 taatgttccaacaggtgaagtggtactatgttgttgtagcctttgtgcttgctcctgtgc 1213 Query: 100 ttggatttgccaattcatacgggacagggcttaccgacatcaacatgggctataactatg 159 | ||||| ||||| | || || || ||||| || ||||| |||||| |||| ||||||| Sbjct: 1214 tgggattctccaatgcctatggaactgggctaactgacatgaacatgagctacaactatg 1273 Query: 160 gcaagatcgctctctttgtctttgc 184 ||||||| |||||||| ||||||| Sbjct: 1274 gcaagattgctctcttcatctttgc 1298 Score = 60.0 bits (30), Expect = 7e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 340 ttggaacagccatgggttgcattgtctcccccctcacgttcatgctcttctacaaggcat 399 |||| ||||||||||| ||||| || | || || || ||| ||||||||||||| |||| Sbjct: 1454 ttggtacagccatgggctgcataatcgctccactgactttcttgctcttctacaaagcat 1513 Query: 400 ttgatattggtaacccagatgg 421 |||||||||| ||||| ||||| Sbjct: 1514 ttgatattgggaaccctgatgg 1535
>dbj|AB164646.1| Oryza sativa (japonica cultivar-group) OsYSL2 mRNA for hypothetical protein, complete cds Length = 2025 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 40 taatgttcaaacaagtgaagtggtactatgttgttatagcctatgtcgttgcccccatgc 99 |||||||| |||| ||||||||||||||||||||| |||||| ||| |||| || ||| Sbjct: 1229 taatgttccaacaggtgaagtggtactatgttgttgtagcctttgtgcttgctcctgtgc 1288 Query: 100 ttggatttgccaattcatacgggacagggcttaccgacatcaacatgggctataactatg 159 | ||||| ||||| | || || || ||||| || ||||| |||||| |||| ||||||| Sbjct: 1289 tgggattctccaatgcctatggaactgggctaactgacatgaacatgagctacaactatg 1348 Query: 160 gcaagatcgctctctttgtctttgc 184 ||||||| |||||||| ||||||| Sbjct: 1349 gcaagattgctctcttcatctttgc 1373 Score = 60.0 bits (30), Expect = 7e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 340 ttggaacagccatgggttgcattgtctcccccctcacgttcatgctcttctacaaggcat 399 |||| ||||||||||| ||||| || | || || || ||| ||||||||||||| |||| Sbjct: 1529 ttggtacagccatgggctgcataatcgctccactgactttcttgctcttctacaaagcat 1588 Query: 400 ttgatattggtaacccagatgg 421 |||||||||| ||||| ||||| Sbjct: 1589 ttgatattgggaaccctgatgg 1610
>dbj|AB126253.1| Oryza sativa (japonica cultivar-group) OsYSL2 mRNA for YS1-like metal-nicotianamine transporter, complete cds Length = 2025 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 40 taatgttcaaacaagtgaagtggtactatgttgttatagcctatgtcgttgcccccatgc 99 |||||||| |||| ||||||||||||||||||||| |||||| ||| |||| || ||| Sbjct: 1229 taatgttccaacaggtgaagtggtactatgttgttgtagcctttgtgcttgctcctgtgc 1288 Query: 100 ttggatttgccaattcatacgggacagggcttaccgacatcaacatgggctataactatg 159 | ||||| ||||| | || || || ||||| || ||||| |||||| |||| ||||||| Sbjct: 1289 tgggattctccaatgcctatggaactgggctaactgacatgaacatgagctacaactatg 1348 Query: 160 gcaagatcgctctctttgtctttgc 184 ||||||| |||||||| ||||||| Sbjct: 1349 gcaagattgctctcttcatctttgc 1373 Score = 60.0 bits (30), Expect = 7e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 340 ttggaacagccatgggttgcattgtctcccccctcacgttcatgctcttctacaaggcat 399 |||| ||||||||||| ||||| || | || || || ||| ||||||||||||| |||| Sbjct: 1529 ttggtacagccatgggctgcataatcgctccactgactttcttgctcttctacaaagcat 1588 Query: 400 ttgatattggtaacccagatgg 421 |||||||||| ||||| ||||| Sbjct: 1589 ttgatattgggaaccctgatgg 1610
>gb|AF186234.2|AF186234 Zea mays iron-phytosiderophore transporter protein yellow stripe 1 (ys1) mRNA, complete cds Length = 2494 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 108 gccaattcatacgggacagggcttaccgacatcaacatgggctataactatggcaagatc 167 ||||| || ||||| || ||||| |||||||||||||||| ||| ||||| ||||||||| Sbjct: 1504 gccaactcctacggcacggggctcaccgacatcaacatggcctacaactacggcaagatc 1563 Query: 168 gctctctttgtctttgcgggatgggccgg 196 || ||||| |||| |||| |||||||| Sbjct: 1564 gcgctcttcatcttcgcggcctgggccgg 1592 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 348 gccatgggttgcattgtctcccccctcacgttcatgctcttctacaa 394 |||||||| ||| | ||| | |||||||||||| ||||||||||||| Sbjct: 1744 gccatgggctgcgtcgtcgcgcccctcacgttcctgctcttctacaa 1790
>ref|XM_473374.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2028 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 117 tacgggacagggcttaccgacatcaacatgggctataactatggcaagatcgctctcttt 176 ||||| || ||||| |||||||| |||||||| || ||||| ||||||||||| ||||| Sbjct: 1309 tacggcacggggctcaccgacatgaacatggggtacaactacggcaagatcgcgctcttc 1368 Query: 177 gtctttgcgggatgggccgg 196 |||| |||| |||||||| Sbjct: 1369 atcttcgcggcgtgggccgg 1388 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Plus Query: 243 aagcagttggtgcttatctctgccgatttgatgcaagacttcaagacg 290 |||||| ||||||| ||||| ||||| ||||||| |||||||||||| Sbjct: 1435 aagcagctggtgctcatctccgccgacctgatgcacgacttcaagacg 1482
>gb|AY512582.1| Oryza sativa iron transport protein 2 mRNA, complete cds Length = 2028 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 117 tacgggacagggcttaccgacatcaacatgggctataactatggcaagatcgctctcttt 176 ||||| || ||||| |||||||| |||||||| || ||||| ||||||||||| ||||| Sbjct: 1309 tacggcacggggctcaccgacatgaacatggggtacaactacggcaagatcgcgctcttc 1368 Query: 177 gtctttgcgggatgggccgg 196 |||| |||| |||||||| Sbjct: 1369 atcttcgcggcgtgggccgg 1388 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Plus Query: 243 aagcagttggtgcttatctctgccgatttgatgcaagacttcaagacg 290 |||||| ||||||| ||||| ||||| ||||||| |||||||||||| Sbjct: 1435 aagcagctggtgctcatctccgccgacctgatgcacgacttcaagacg 1482
>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08, complete sequence Length = 140449 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 117 tacgggacagggcttaccgacatcaacatgggctataactatggcaagatcgctctcttt 176 ||||| || ||||| |||||||| |||||||| || ||||| ||||||||||| ||||| Sbjct: 101054 tacggcacggggctcaccgacatgaacatggggtacaactacggcaagatcgcgctcttc 100995 Query: 177 gtctttgcgggatgggccgg 196 |||| |||| |||||||| Sbjct: 100994 atcttcgcggcgtgggccgg 100975 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Minus Query: 243 aagcagttggtgcttatctctgccgatttgatgcaagacttcaagacg 290 |||||| ||||||| ||||| ||||| ||||||| |||||||||||| Sbjct: 100928 aagcagctggtgctcatctccgccgacctgatgcacgacttcaagacg 100881
>dbj|AB190924.1| Oryza sativa (japonica cultivar-group) osysl16 mRNA for hypothetical protein, complete cds Length = 2028 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 117 tacgggacagggcttaccgacatcaacatgggctataactatggcaagatcgctctcttt 176 ||||| || ||||| |||||||| |||||||| || ||||| ||||||||||| ||||| Sbjct: 1309 tacggcacggggctcaccgacatgaacatggggtacaactacggcaagatcgcgctcttc 1368 Query: 177 gtctttgcgggatgggccgg 196 |||| |||| |||||||| Sbjct: 1369 atcttcgcggcgtgggccgg 1388 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Plus Query: 243 aagcagttggtgcttatctctgccgatttgatgcaagacttcaagacg 290 |||||| ||||||| ||||| ||||| ||||||| |||||||||||| Sbjct: 1435 aagcagctggtgctcatctccgccgacctgatgcacgacttcaagacg 1482
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 117 tacgggacagggcttaccgacatcaacatgggctataactatggcaagatcgctctcttt 176 ||||| || ||||| |||||||| |||||||| || ||||| ||||||||||| ||||| Sbjct: 27158411 tacggcacggggctcaccgacatgaacatggggtacaactacggcaagatcgcgctcttc 27158352 Query: 177 gtctttgcgggatgggccgg 196 |||| |||| |||||||| Sbjct: 27158351 atcttcgcggcgtgggccgg 27158332 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Minus Query: 243 aagcagttggtgcttatctctgccgatttgatgcaagacttcaagacg 290 |||||| ||||||| ||||| ||||| ||||||| |||||||||||| Sbjct: 27158285 aagcagctggtgctcatctccgccgacctgatgcacgacttcaagacg 27158238 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 gccatgggttgcattgtctccccc 371 ||||||||||||||| |||||||| Sbjct: 29060806 gccatgggttgcattctctccccc 29060783
>dbj|AK070304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049B02, full insert sequence Length = 2472 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 117 tacgggacagggcttaccgacatcaacatgggctataactatggcaagatcgctctcttt 176 ||||| || ||||| |||||||| |||||||| || ||||| ||||||||||| ||||| Sbjct: 1465 tacggcacggggctcaccgacatgaacatggggtacaactacggcaagatcgcgctcttc 1524 Query: 177 gtctttgcgggatgggccgg 196 |||| |||| |||||||| Sbjct: 1525 atcttcgcggcgtgggccgg 1544 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Plus Query: 243 aagcagttggtgcttatctctgccgatttgatgcaagacttcaagacg 290 |||||| ||||||| ||||| ||||| ||||||| |||||||||||| Sbjct: 1591 aagcagctggtgctcatctccgccgacctgatgcacgacttcaagacg 1638
>ref|XM_414321.1| PREDICTED: Gallus gallus similar to Histone deacetylase 11 (LOC415978), mRNA Length = 3327 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 taccagtaatgttcaaacaagtgaa 58 |||||||||||||||| |||||||| Sbjct: 2579 taccagtaatgttcaagcaagtgaa 2555
>emb|CR406835.1| Gallus gallus finished cDNA, clone ChEST737i24 Length = 1168 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 taccagtaatgttcaaacaagtgaa 58 |||||||||||||||| |||||||| Sbjct: 420 taccagtaatgttcaagcaagtgaa 396
>gb|DQ366110.1| Thlaspi caerulescens YSL transporter 3 gene, complete cds Length = 2831 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 124 cagggcttaccgacatcaacatgggctataactatgg 160 |||||||||| ||||| ||||||| ||||||||||| Sbjct: 1979 cagggcttacggacatgaacatggcttataactatgg 2015
>emb|BX933925.2| Gallus gallus finished cDNA, clone ChEST131n23 Length = 2355 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 taccagtaatgttcaaacaagtgaa 58 |||||||||||||||| |||||||| Sbjct: 1607 taccagtaatgttcaagcaagtgaa 1583
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 cccatgcttggatttgccaat 113 ||||||||||||||||||||| Sbjct: 7203838 cccatgcttggatttgccaat 7203818
>gb|AC019102.13| Homo sapiens BAC clone RP11-457A20 from 2, complete sequence Length = 158242 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 atgggttgcattgtctccccc 371 ||||||||||||||||||||| Sbjct: 128989 atgggttgcattgtctccccc 129009
>emb|BX936035.1| Gallus gallus finished cDNA, clone ChEST23d23 Length = 1925 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 taccagtaatgttcaaacaagtgaa 58 |||||||||||||||| |||||||| Sbjct: 1180 taccagtaatgttcaagcaagtgaa 1156
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 cccatgcttggatttgccaat 113 ||||||||||||||||||||| Sbjct: 81249 cccatgcttggatttgccaat 81229
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 cccatgcttggatttgccaat 113 ||||||||||||||||||||| Sbjct: 38842 cccatgcttggatttgccaat 38822
>gb|AC145911.4| Gallus gallus BAC clone CH261-47H12 from chromosome unknown, complete sequence Length = 210020 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 taccagtaatgttcaaacaagtgaa 58 |||||||||||||||| |||||||| Sbjct: 130515 taccagtaatgttcaagcaagtgaa 130539
>gb|DQ268829.1| Thlaspi caerulescens YSL transporter 3 mRNA, complete cds Length = 2314 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 124 cagggcttaccgacatcaacatgggctataactatgg 160 |||||||||| ||||| ||||||| ||||||||||| Sbjct: 1462 cagggcttacggacatgaacatggcttataactatgg 1498
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 gaatggtgtcattgccggcc 222 |||||||||||||||||||| Sbjct: 3995754 gaatggtgtcattgccggcc 3995773
>gb|AC102575.11| Mus musculus chromosome 14, clone RP23-239P22, complete sequence Length = 238123 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 tttgatattggtaacccaga 418 |||||||||||||||||||| Sbjct: 157354 tttgatattggtaacccaga 157373
>emb|CR450764.3| Zebrafish DNA sequence from clone CH211-209F22 in linkage group 11, complete sequence Length = 152815 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttctacaaggcatttgata 405 |||||||||||||||||||| Sbjct: 101557 cttctacaaggcatttgata 101538 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttctacaaggcatttgata 405 |||||||||||||||||||| Sbjct: 69586 cttctacaaggcatttgata 69567 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttctacaaggcatttgata 405 |||||||||||||||||||| Sbjct: 29945 cttctacaaggcatttgata 29926
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 gaatggtgtcattgccggcc 222 |||||||||||||||||||| Sbjct: 4487587 gaatggtgtcattgccggcc 4487606
>gb|AC150977.12| Medicago truncatula clone mth2-32m9, complete sequence Length = 125772 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 aaacatcaccaaaatccatg 323 |||||||||||||||||||| Sbjct: 97854 aaacatcaccaaaatccatg 97835
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 gaatggtgtcattgccggcc 222 |||||||||||||||||||| Sbjct: 4247416 gaatggtgtcattgccggcc 4247435
>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04, complete sequence Length = 164567 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 gccatgggttgcattgtctccccc 371 ||||||||||||||| |||||||| Sbjct: 127460 gccatgggttgcattctctccccc 127437
>emb|BX000700.38| Zebrafish DNA sequence from clone DKEY-27D5 in linkage group 11, complete sequence Length = 223355 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttctacaaggcatttgata 405 |||||||||||||||||||| Sbjct: 200251 cttctacaaggcatttgata 200232 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttctacaaggcatttgata 405 |||||||||||||||||||| Sbjct: 49488 cttctacaaggcatttgata 49469 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttctacaaggcatttgata 405 |||||||||||||||||||| Sbjct: 34068 cttctacaaggcatttgata 34049
>gb|AC090607.6| Homo sapiens chromosome 15, clone RP11-762H8, complete sequence Length = 156559 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 gccatgggttgcattgtctccccc 371 ||||||||||| |||||||||||| Sbjct: 8246 gccatgggttgaattgtctccccc 8269
>emb|BX470258.4| Zebrafish DNA sequence from clone CH211-278L13 in linkage group 15, complete sequence Length = 184626 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttctacaaggcatttgata 405 |||||||||||||||||||| Sbjct: 110903 cttctacaaggcatttgata 110884 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttctacaaggcatttgata 405 |||||||||||||||||||| Sbjct: 50852 cttctacaaggcatttgata 50833
>gb|AC171242.2| Gallus gallus BAC clone CH261-59O7 from chromosome ul, complete sequence Length = 191648 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 actcaaacatcaccaaaatc 319 |||||||||||||||||||| Sbjct: 83135 actcaaacatcaccaaaatc 83154
>emb|BX323875.15| Zebrafish DNA sequence from clone CH211-135L21 in linkage group 17, complete sequence Length = 173617 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 cttctacaaggcatttgata 405 |||||||||||||||||||| Sbjct: 142467 cttctacaaggcatttgata 142486
>gb|AC093225.2| Homo sapiens chromosome 5 clone CTD-2265D6, complete sequence Length = 112696 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aacatgggctataactatgg 160 |||||||||||||||||||| Sbjct: 45825 aacatgggctataactatgg 45844
>gb|AC154772.2| Mus musculus BAC clone RP24-448H7 from chromosome 16, complete sequence Length = 169374 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 gctctctttgtctttgcgggatgg 191 |||||||||||||||| ||||||| Sbjct: 141312 gctctctttgtctttgtgggatgg 141335
>gb|U73581.1|PMU73581 Pichia misumaiensis 26S ribosomal RNA gene, partial sequence Length = 576 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 acatcaacatgggctataac 155 |||||||||||||||||||| Sbjct: 513 acatcaacatgggctataac 494
>gb|AC079819.40| Mus musculus strain C57BL/6J chromosome 10 clone rp23-438b23, complete sequence Length = 181149 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ttggtgcttatctctgccga 268 |||||||||||||||||||| Sbjct: 85264 ttggtgcttatctctgccga 85245
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 tcacgttcatgctcttctac 392 |||||||||||||||||||| Sbjct: 3926800 tcacgttcatgctcttctac 3926819
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gaatggtgtcattgccggcc 222 |||||||||||||||||||| Sbjct: 3777539 gaatggtgtcattgccggcc 3777520
>gb|AC090260.13| Homo sapiens chromosome 15, clone RP11-285A1, complete sequence Length = 207206 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 gccatgggttgcattgtctccccc 371 ||||||||||| |||||||||||| Sbjct: 8230 gccatgggttgaattgtctccccc 8207
>gb|AC171011.2| Gallus gallus BAC clone CH261-112C5 from chromosome ul, complete sequence Length = 230767 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 actcaaacatcaccaaaatc 319 |||||||||||||||||||| Sbjct: 35902 actcaaacatcaccaaaatc 35921
>gb|AC136590.2| Homo sapiens chromosome 5 clone CTD-2312G21, complete sequence Length = 301479 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aacatgggctataactatgg 160 |||||||||||||||||||| Sbjct: 270072 aacatgggctataactatgg 270091
>gb|AC160944.2| Pan troglodytes BAC clone CH251-7D22 from chromosome unknown, complete sequence Length = 191791 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 atgggccggtaaagagaatg 207 |||||||||||||||||||| Sbjct: 174940 atgggccggtaaagagaatg 174921
>emb|CR931725.6| Zebrafish DNA sequence from clone DKEY-22M10 in linkage group 11, complete sequence Length = 205299 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 cttctacaaggcatttgata 405 |||||||||||||||||||| Sbjct: 150951 cttctacaaggcatttgata 150970 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 cttctacaaggcatttgata 405 |||||||||||||||||||| Sbjct: 13364 cttctacaaggcatttgata 13383
>emb|CR450709.12| Zebrafish DNA sequence from clone CH211-249J24 in linkage group 11, complete sequence Length = 157745 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttctacaaggcatttgata 405 |||||||||||||||||||| Sbjct: 60589 cttctacaaggcatttgata 60570 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttctacaaggcatttgata 405 |||||||||||||||||||| Sbjct: 20008 cttctacaaggcatttgata 19989
>dbj|AP002814.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-882G5, complete sequence Length = 167198 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tgcttggatttgccaattca 116 |||||||||||||||||||| Sbjct: 18264 tgcttggatttgccaattca 18245
>dbj|AP001836.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-693I21, complete sequence Length = 145782 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tgcttggatttgccaattca 116 |||||||||||||||||||| Sbjct: 101788 tgcttggatttgccaattca 101769
>emb|CT025624.11| Mouse DNA sequence from clone RP24-212N20 on chromosome 14, complete sequence Length = 198113 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 aaagagaatggtgtcattgc 217 |||||||||||||||||||| Sbjct: 56851 aaagagaatggtgtcattgc 56832
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 gaatggtgtcattgccggcc 222 |||||||||||||||||||| Sbjct: 4849825 gaatggtgtcattgccggcc 4849844
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 gaatggtgtcattgccggcc 222 |||||||||||||||||||| Sbjct: 4781063 gaatggtgtcattgccggcc 4781082
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gaatggtgtcattgccggcc 222 |||||||||||||||||||| Sbjct: 3675039 gaatggtgtcattgccggcc 3675020
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 gaatggtgtcattgccggcc 222 |||||||||||||||||||| Sbjct: 3835340 gaatggtgtcattgccggcc 3835359
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 gaatggtgtcattgccggcc 222 |||||||||||||||||||| Sbjct: 4196525 gaatggtgtcattgccggcc 4196544
>dbj|AB070952.1| Streptomyces avermitilis peptide-3 biosynthetic gene cluster Length = 23451 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tcacgttcatgctcttctac 392 |||||||||||||||||||| Sbjct: 16362 tcacgttcatgctcttctac 16343 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,566,512 Number of Sequences: 3902068 Number of extensions: 3566512 Number of successful extensions: 68065 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67717 Number of HSP's gapped (non-prelim): 336 length of query: 484 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 462 effective length of database: 17,147,199,772 effective search space: 7922006294664 effective search space used: 7922006294664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)