>PSBS_TOBAC (Q9SMB4) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 274

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 23/35 (65%), Positives = 31/35 (88%)
 Frame = +1

Query: 4   PSAXIEPLVLFNVVFFFIAAINPGTGKFISGEDDD 108
           P   IEPL+LFN+VFFF+AAINPGTGKF++ E+++
Sbjct: 240 PINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274

>PSBS_SOLSG (Q9FPP4) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 276

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +1

Query: 4   PSAXIEPLVLFNVVFFFIAAINPGTGKFISGEDDD 108
           P   IEPL+LFN+ FFF AAINPGTGKFI+ E++D
Sbjct: 242 PINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276

>PSBS_LYCES (P54773) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 276

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +1

Query: 4   PSAXIEPLVLFNVVFFFIAAINPGTGKFISGEDDD 108
           P   IEPL+LFN+ FFF AAINPGTGKFI+ E++D
Sbjct: 242 PINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276

>PSBS_SPIOL (Q02060) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 274

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +1

Query: 4   PSAXIEPLVLFNVVFFFIAAINPGTGKFISGEDDD 108
           P   IEPLVL NVVFFFIAAINPGTGKFI+ ++++
Sbjct: 239 PINEIEPLVLLNVVFFFIAAINPGTGKFITDDEEE 273

>PSBS_ARATH (Q9XF91) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 265

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 22/35 (62%), Positives = 26/35 (74%)
 Frame = +1

Query: 4   PSAXIEPLVLFNVVFFFIAAINPGTGKFISGEDDD 108
           P   IEPLVL NV FFF AAINPG GKFI+ + ++
Sbjct: 230 PIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264

>ARNT2_MOUSE (Q61324) Aryl hydrocarbon receptor nuclear translocator 2 (ARNT|
           protein 2)
          Length = 712

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 70  PGTGKFISGEDDD*IGTGTRECFLAINCTYVRALPVC 180
           P  G  I  ED D +G G++ C +AI    V + PVC
Sbjct: 290 PPAGMTIPEEDAD-VGQGSKYCLVAIGRLQVTSSPVC 325

>ARNT2_HUMAN (Q9HBZ2) Aryl hydrocarbon receptor nuclear translocator 2 (ARNT|
           protein 2)
          Length = 706

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 70  PGTGKFISGEDDD*IGTGTRECFLAINCTYVRALPVC 180
           P  G  I  ED D +G G++ C +AI    V + PVC
Sbjct: 279 PPAGMTIPEEDAD-VGQGSKYCLVAIGRLQVTSSPVC 314


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,878,569
Number of Sequences: 219361
Number of extensions: 429789
Number of successful extensions: 963
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)