>dbj|AK121732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082H18, full
           insert sequence
          Length = 1445

 Score =  230 bits (116), Expect = 3e-57
 Identities = 187/211 (88%)
 Strand = Plus / Plus

                                                                       
Query: 48  ccaaggggaggaagcgcaagttcctgccccacggcaagccggtccggaagggcgcgtacc 107
           |||||||||||||||| |||| ||| |||||||| ||||||||  ||||||| |||||||
Sbjct: 130 ccaaggggaggaagcggaagtacctcccccacgggaagccggtgaggaagggggcgtacc 189

                                                                       
Query: 108 cgctgcgccccggcgtgcagggcttcttcatcacctgcgacggcggccgcgagcaccagg 167
           ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 190 cgctgcgccccggggtgcagggcttcttcctcacctgcgacggcggccgcgagcgccagg 249

                                                                       
Query: 168 ccacccgtgaggccatctncctcctcgacaccttctatgaggacctggttgacgggaaag 227
           ||||||| |||||| ||| ||| |||||| ||||||||||||| ||||| || |||||||
Sbjct: 250 ccacccgcgaggccctctccctgctcgactccttctatgaggatctggtggatgggaaag 309

                                          
Query: 228 tgtttgatgtgaagcccaagagcatccctga 258
             |  |||| ||||||||| |||||||||||
Sbjct: 310 gatcagatgggaagcccaaaagcatccctga 340

>dbj|AK119932.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-A08, full
           insert sequence
          Length = 1331

 Score =  222 bits (112), Expect = 7e-55
 Identities = 186/211 (88%)
 Strand = Plus / Plus

                                                                       
Query: 48  ccaaggggaggaagcgcaagttcctgccccacggcaagccggtccggaagggcgcgtacc 107
           |||||||||||||||| |||| ||| |||||||| ||||||||  ||||||| |||||||
Sbjct: 58  ccaaggggaggaagcggaagtacctcccccacgggaagccggtgaggaagggggcgtacc 117

                                                                       
Query: 108 cgctgcgccccggcgtgcagggcttcttcatcacctgcgacggcggccgcgagcaccagg 167
           ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 118 cgctgcgccccggggtgcagggcttcttcctcacctgcgacggcggccgcgagcgccagg 177

                                                                       
Query: 168 ccacccgtgaggccatctncctcctcgacaccttctatgaggacctggttgacgggaaag 227
           ||||||| |||||| ||| ||| |||||| |||||||||| || ||||| || |||||||
Sbjct: 178 ccacccgcgaggccctctccctgctcgactccttctatgaagatctggtggatgggaaag 237

                                          
Query: 228 tgtttgatgtgaagcccaagagcatccctga 258
             |  |||| ||||||||| |||||||||||
Sbjct: 238 gatcagatgggaagcccaaaagcatccctga 268

>gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0542B04,
              complete sequence
          Length = 182823

 Score =  186 bits (94), Expect = 4e-44
 Identities = 135/149 (90%)
 Strand = Plus / Plus

                                                                          
Query: 48     ccaaggggaggaagcgcaagttcctgccccacggcaagccggtccggaagggcgcgtacc 107
              |||||||||||||||| |||| ||| |||||||| ||||||||  ||||||| |||||||
Sbjct: 178912 ccaaggggaggaagcggaagtacctcccccacgggaagccggtgaggaagggggcgtacc 178971

                                                                          
Query: 108    cgctgcgccccggcgtgcagggcttcttcatcacctgcgacggcggccgcgagcaccagg 167
              ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 178972 cgctgcgccccggggtgcagggcttcttcctcacctgcgacggcggccgcgagcgccagg 179031

                                           
Query: 168    ccacccgtgaggccatctncctcctcgac 196
              ||||||| |||||| ||| ||| ||||||
Sbjct: 179032 ccacccgcgaggccctctccctgctcgac 179060

>gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09,
              complete sequence
          Length = 143533

 Score =  186 bits (94), Expect = 4e-44
 Identities = 135/149 (90%)
 Strand = Plus / Minus

                                                                          
Query: 48     ccaaggggaggaagcgcaagttcctgccccacggcaagccggtccggaagggcgcgtacc 107
              |||||||||||||||| |||| ||| |||||||| ||||||||  ||||||| |||||||
Sbjct: 101802 ccaaggggaggaagcggaagtacctcccccacgggaagccggtgaggaagggggcgtacc 101743

                                                                          
Query: 108    cgctgcgccccggcgtgcagggcttcttcatcacctgcgacggcggccgcgagcaccagg 167
              ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 101742 cgctgcgccccggggtgcagggcttcttcctcacctgcgacggcggccgcgagcgccagg 101683

                                           
Query: 168    ccacccgtgaggccatctncctcctcgac 196
              ||||||| |||||| ||| ||| ||||||
Sbjct: 101682 ccacccgcgaggccctctccctgctcgac 101654

>gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09,
              complete sequence
          Length = 143533

 Score =  186 bits (94), Expect = 4e-44
 Identities = 135/149 (90%)
 Strand = Plus / Minus

                                                                          
Query: 48     ccaaggggaggaagcgcaagttcctgccccacggcaagccggtccggaagggcgcgtacc 107
              |||||||||||||||| |||| ||| |||||||| ||||||||  ||||||| |||||||
Sbjct: 101802 ccaaggggaggaagcggaagtacctcccccacgggaagccggtgaggaagggggcgtacc 101743

                                                                          
Query: 108    cgctgcgccccggcgtgcagggcttcttcatcacctgcgacggcggccgcgagcaccagg 167
              ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 101742 cgctgcgccccggggtgcagggcttcttcctcacctgcgacggcggccgcgagcgccagg 101683

                                           
Query: 168    ccacccgtgaggccatctncctcctcgac 196
              ||||||| |||||| ||| ||| ||||||
Sbjct: 101682 ccacccgcgaggccctctccctgctcgac 101654

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  186 bits (94), Expect = 4e-44
 Identities = 135/149 (90%)
 Strand = Plus / Plus

                                                                            
Query: 48       ccaaggggaggaagcgcaagttcctgccccacggcaagccggtccggaagggcgcgtacc 107
                |||||||||||||||| |||| ||| |||||||| ||||||||  ||||||| |||||||
Sbjct: 20334402 ccaaggggaggaagcggaagtacctcccccacgggaagccggtgaggaagggggcgtacc 20334461

                                                                            
Query: 108      cgctgcgccccggcgtgcagggcttcttcatcacctgcgacggcggccgcgagcaccagg 167
                ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 20334462 cgctgcgccccggggtgcagggcttcttcctcacctgcgacggcggccgcgagcgccagg 20334521

                                             
Query: 168      ccacccgtgaggccatctncctcctcgac 196
                ||||||| |||||| ||| ||| ||||||
Sbjct: 20334522 ccacccgcgaggccctctccctgctcgac 20334550

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  186 bits (94), Expect = 4e-44
 Identities = 135/149 (90%)
 Strand = Plus / Plus

                                                                            
Query: 48       ccaaggggaggaagcgcaagttcctgccccacggcaagccggtccggaagggcgcgtacc 107
                |||||||||||||||| |||| ||| |||||||| ||||||||  ||||||| |||||||
Sbjct: 20644639 ccaaggggaggaagcggaagtacctcccccacgggaagccggtgaggaagggggcgtacc 20644698

                                                                            
Query: 108      cgctgcgccccggcgtgcagggcttcttcatcacctgcgacggcggccgcgagcaccagg 167
                ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 20644699 cgctgcgccccggggtgcagggcttcttcctcacctgcgacggcggccgcgagcgccagg 20644758

                                             
Query: 168      ccacccgtgaggccatctncctcctcgac 196
                ||||||| |||||| ||| ||| ||||||
Sbjct: 20644759 ccacccgcgaggccctctccctgctcgac 20644787

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 31     caacaccggcggcgacaccaag 52
              ||||||||||||||||||||||
Sbjct: 149367 caacaccggcggcgacaccaag 149388

>ref|XM_629753.1| Dictyostelium discoideum hypothetical protein (DDB0184149), partial
            mRNA
          Length = 2961

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 298  ttcctctgatggtgagggtgaagat 322
            |||||||||| ||||||||||||||
Sbjct: 1461 ttcctctgatagtgagggtgaagat 1485

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 3       tggcctccgccgccggcaagc 23
               |||||||||||||||||||||
Sbjct: 2156948 tggcctccgccgccggcaagc 2156968

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 100     cgcgtacccgctgcgccccggcgtg 124
               |||||||| ||||||||||||||||
Sbjct: 2082724 cgcgtacctgctgcgccccggcgtg 2082700

>ref|XM_481644.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1557

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 cacctgcgacggcggccgcg 158
           ||||||||||||||||||||
Sbjct: 243 cacctgcgacggcggccgcg 262

>gb|AC024847.1| Caenorhabditis elegans cosmid Y65B4BR, complete sequence
          Length = 44237

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 311   gagggtgaagatcatttggtggag 334
             |||||||| |||||||||||||||
Sbjct: 18385 gagggtgacgatcatttggtggag 18408

>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12
          Length = 300000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   gcttcttcatcacctgcgac 148
             ||||||||||||||||||||
Sbjct: 72708 gcttcttcatcacctgcgac 72689

>gb|AC127563.4| Mus musculus BAC clone RP24-283E13 from chromosome 10, complete sequence
          Length = 150502

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 293    tctgattcctctgatggtga 312
              ||||||||||||||||||||
Sbjct: 112109 tctgattcctctgatggtga 112090

>ref|NM_001024294.1| Rattus norvegicus similar to SWAP2 (LOC499390), mRNA
          Length = 2161

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 97   gggcgcgtacccgctgcgcc 116
            ||||||||||||||||||||
Sbjct: 1434 gggcgcgtacccgctgcgcc 1415

>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 192     tcgacaccttctatgaggac 211
               ||||||||||||||||||||
Sbjct: 1662555 tcgacaccttctatgaggac 1662536

>gb|AC158239.2| Mus musculus BAC clone RP23-48A24 from chromosome 10, complete sequence
          Length = 256496

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    tctgattcctctgatggtga 312
              ||||||||||||||||||||
Sbjct: 225466 tctgattcctctgatggtga 225485

>ref|NM_058350.2| Caenorhabditis elegans PaTched Related family member (ptr-21)
           (ptr-21) mRNA, complete cds
          Length = 3307

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 311 gagggtgaagatcatttggtggag 334
           |||||||| |||||||||||||||
Sbjct: 787 gagggtgacgatcatttggtggag 810

>gb|BC089090.1| Rattus norvegicus similar to SWAP2, mRNA (cDNA clone MGC:105839
            IMAGE:7111206), complete cds
          Length = 2161

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 97   gggcgcgtacccgctgcgcc 116
            ||||||||||||||||||||
Sbjct: 1434 gggcgcgtacccgctgcgcc 1415

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 192      tcgacaccttctatgaggac 211
                ||||||||||||||||||||
Sbjct: 14169572 tcgacaccttctatgaggac 14169591

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 139      cacctgcgacggcggccgcg 158
                ||||||||||||||||||||
Sbjct: 14447209 cacctgcgacggcggccgcg 14447228

>gb|AC129915.6| Homo sapiens chromosome 8, clone CTD-3212A4, complete sequence
          Length = 162359

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 347  tggaaatgatgcagaaaaag 366
            ||||||||||||||||||||
Sbjct: 9746 tggaaatgatgcagaaaaag 9727

>gb|AC026950.15| Homo sapiens chromosome 8, clone RP11-555E9, complete sequence
          Length = 165051

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 347  tggaaatgatgcagaaaaag 366
            ||||||||||||||||||||
Sbjct: 5761 tggaaatgatgcagaaaaag 5780

>dbj|AP005490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0049I01
          Length = 140261

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   cacctgcgacggcggccgcg 158
             ||||||||||||||||||||
Sbjct: 42077 cacctgcgacggcggccgcg 42096

>dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0670E08
          Length = 133106

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   cacctgcgacggcggccgcg 158
             ||||||||||||||||||||
Sbjct: 91492 cacctgcgacggcggccgcg 91511

>emb|BX890617.13| Zebrafish DNA sequence from clone DKEYP-84F11 in linkage group 19,
             complete sequence
          Length = 182182

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   ctgattcctctgatggtgag 313
             ||||||||||||||||||||
Sbjct: 90135 ctgattcctctgatggtgag 90154

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 192      tcgacaccttctatgaggac 211
                ||||||||||||||||||||
Sbjct: 14123852 tcgacaccttctatgaggac 14123871

>emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC OSJNBa0016A01 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 150703

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tcgacaccttctatgaggac 211
             ||||||||||||||||||||
Sbjct: 96113 tcgacaccttctatgaggac 96132


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,925,791
Number of Sequences: 3902068
Number of extensions: 2925791
Number of successful extensions: 63952
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63445
Number of HSP's gapped (non-prelim): 507
length of query: 388
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 366
effective length of database: 17,147,199,772
effective search space: 6275875116552
effective search space used: 6275875116552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)