ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal27a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009293.1| Triticum aestivum clone wlm0.pk039.d17:fis, full ... 468 e-128
2dbj|AK063588.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
4dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
5gb|AY111038.1| Zea mays CL826_-1 mRNA sequence 111 3e-21
6dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 54 6e-04
7gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 52 0.002
8gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 48 0.035
9gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 46 0.14
10gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 44 0.55
11ref|XM_809948.1| Trypanosoma cruzi strain CL Brener short-chain ... 42 2.2
12emb|AL360011.19| Human DNA sequence from clone RP11-103A2 on chr... 42 2.2
13emb|BX908396.13| Zebrafish DNA sequence from clone CH211-267G5 i... 42 2.2
14gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 2.2
15gb|DQ200260.1| Taphozous mauritianus mast cell growth factor gen... 40 8.6
16ref|XM_950999.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.6
17ref|XM_330887.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.6
18gb|AC140336.2| Mus musculus BAC clone RP24-266F17 from chromosom... 40 8.6
19gb|AC127256.4| Mus musculus BAC clone RP24-296G17 from chromosom... 40 8.6
20gb|AC091611.5| Homo sapiens chromosome 1 clone RP11-369L17, comp... 40 8.6
21emb|CR376728.12| Zebrafish DNA sequence from clone DKEYP-30A5 in... 40 8.6
22gb|AC109280.9| Mus musculus chromosome 18, clone RP23-400B7, com... 40 8.6
23gb|AC145021.14| Medicago truncatula clone mth2-23a16, complete s... 40 8.6
24gb|AF398900.1| Phomopsis longicolla isolate NEB94 translation el... 40 8.6
25gb|AF398899.1| Phomopsis longicolla isolate AK76 translation elo... 40 8.6
26gb|AF398898.1| Phomopsis longicolla isolate 95-VS-24 translation... 40 8.6
27gb|AF398897.1| Phomopsis longicolla isolate 628 translation elon... 40 8.6
28gb|AF398896.1| Phomopsis longicolla isolate 600 translation elon... 40 8.6
29gb|AF398894.1| Diaporthe phaseolorum isolate SW93-5 translation ... 40 8.6
30emb|BX842631.1| Neurospora crassa DNA linkage group I BAC contig... 40 8.6
31emb|BX284753.1|NCB2G14 Neurospora crassa DNA linkage group II BA... 40 8.6
32gb|AC078985.14| Homo sapiens 3q BAC RP11-82C9 (Roswell Park Canc... 40 8.6
33dbj|AK079818.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 40 8.6
34ref|NM_001002094.1| Danio rerio zgc:86909 (zgc:86909), mRNA 40 8.6
35dbj|AK011372.1| Mus musculus 10 days embryo whole body cDNA, RIK... 40 8.6
36gb|BC071530.1| Danio rerio zgc:86909, mRNA (cDNA clone MGC:86909... 40 8.6
37dbj|AP000610.5| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.6
38gb|AC149054.3| Mus musculus BAC clone RP23-443H21 from 18, compl... 40 8.6 
>gb|BT009293.1| Triticum aestivum clone wlm0.pk039.d17:fis, full insert mRNA
           sequence
          Length = 870

 Score =  468 bits (236), Expect = e-128
 Identities = 290/308 (94%)
 Strand = Plus / Plus

                                                                       
Query: 314 gtcatctaccaagtttgatagtggtactggatggccgtcctattatcagccggttggcga 373
           |||||| ||||||||||||||||| |||||||||||||||||||| ||||||||| ||||
Sbjct: 343 gtcatcaaccaagtttgatagtggcactggatggccgtcctattaccagccggttagcga 402

                                                                       
Query: 374 caatgtgaaaagcaagcttgatatgtcaatcttcttcatgcctcggaccgagtccctgtg 433
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 caatgtgaaaagcaagcttgatatgtcaatcttcttcatgcctcggaccgagtccctgtg 462

                                                                       
Query: 434 cgctgtctgcgacgctcatctcgggcatgttttcgacgacgggcctccgccgacgggaaa 493
           ||| |||||||||||||| || ||||||||||||||||||||||| |||||||| || ||
Sbjct: 463 cgccgtctgcgacgctcacctggggcatgttttcgacgacgggccaccgccgactgggaa 522

                                                                       
Query: 494 gagatattgcatcaacagcgcttctctgaagtttaagccccagtagtccctggaagaaga 553
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gagatattgcatcaacagcgcgtctctgaagtttaagccccagtagtccctggaagaaga 582

                                                                       
Query: 554 atcaagatgaaagcaccagcgcgccgcatgcaaattttcgttttggtatgaactatttcc 613
           ||||||||| |||||||| |||| | |||| ||||||| |||| ||||||||||||||||
Sbjct: 583 atcaagatgcaagcaccatcgcgtcccatgtaaattttggtttgggtatgaactatttcc 642

                   
Query: 614 agtgtagt 621
           ||||||||
Sbjct: 643 agtgtagt 650



 Score =  287 bits (145), Expect = 2e-74
 Identities = 154/157 (98%)
 Strand = Plus / Plus

                                                                       
Query: 16  tctctgagtgatgaggagttgaagaagcgcctcacaaaagaacagtattatgtcactcgg 75
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 188 tctctgagtgatgaggagttgaagaagcgcctcacaaaagaacagtattacgtcactcgg 247

                                                                       
Query: 76  cagaagggaactgagagggcattcacaggggaatactggaacactaaaaccccaggcgtc 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 248 cagaagggaactgagagggcattcacaggggaatactggaacactaaaaccccaggcatc 307

                                                
Query: 136 taccactgcatctgctgtgacacccctctgtttgagt 172
           ||||| |||||||||||||||||||||||||||||||
Sbjct: 308 taccattgcatctgctgtgacacccctctgtttgagt 344
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>dbj|AK063588.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A09, full
           insert sequence
          Length = 856

 Score =  149 bits (75), Expect = 1e-32
 Identities = 138/159 (86%)
 Strand = Plus / Plus

                                                                       
Query: 14  catctctgagtgatgaggagttgaagaagcgcctcacaaaagaacagtattatgtcactc 73
           ||||||||| ||||||||||| || ||||||||| |||||||| ||||||||  | ||||
Sbjct: 254 catctctgactgatgaggagtggaggaagcgcctgacaaaagatcagtattacattactc 313

                                                                       
Query: 74  ggcagaagggaactgagagggcattcacaggggaatactggaacactaaaaccccaggcg 133
           |||||||||| || || || ||||| || ||||||||||||||||| |||||||| ||| 
Sbjct: 314 ggcagaagggcacagaaagagcatttactggggaatactggaacaccaaaaccccgggca 373

                                                  
Query: 134 tctaccactgcatctgctgtgacacccctctgtttgagt 172
           ||||||| ||  ||||||||||||||||||| |||||||
Sbjct: 374 tctaccattgtgtctgctgtgacacccctctttttgagt 412



 Score =  117 bits (59), Expect = 5e-23
 Identities = 125/147 (85%)
 Strand = Plus / Plus

                                                                       
Query: 314 gtcatctaccaagtttgatagtggtactggatggccgtcctattatcagccggttggcga 373
           |||||| ||||| ||||||||||||||||| |||||||| |||||||| ||  |||| ||
Sbjct: 411 gtcatcgaccaaatttgatagtggtactgggtggccgtcatattatcaacccattggaga 470

                                                                       
Query: 374 caatgtgaaaagcaagcttgatatgtcaatcttcttcatgcctcggaccgagtccctgtg 433
            ||||| ||  |||||||||||||||| ||| | |||||||||||||| |||   |||||
Sbjct: 471 taatgtaaagtgcaagcttgatatgtccatcatattcatgcctcggactgaggtgctgtg 530

                                      
Query: 434 cgctgtctgcgacgctcatctcgggca 460
            |||||||| ||||||||||| |||||
Sbjct: 531 tgctgtctgtgacgctcatctggggca 557
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  125 bits (63), Expect = 2e-25
 Identities = 129/151 (85%)
 Strand = Plus / Minus

                                                                            
Query: 310      ttaggtcatctaccaagtttgatagtggtactggatggccgtcctattatcagccggttg 369
                |||||||||| ||||| ||||||||||||||||| |||||||| |||||||| ||  |||
Sbjct: 15501557 ttaggtcatcgaccaaatttgatagtggtactgggtggccgtcatattatcaacccattg 15501498

                                                                            
Query: 370      gcgacaatgtgaaaagcaagcttgatatgtcaatcttcttcatgcctcggaccgagtccc 429
                | || ||||| ||  |||||||||||||||| ||| | |||||||||||||| |||   |
Sbjct: 15501497 gagataatgtaaagtgcaagcttgatatgtccatcatattcatgcctcggactgaggtgc 15501438

                                               
Query: 430      tgtgcgctgtctgcgacgctcatctcgggca 460
                |||| |||||||| ||||||||||| |||||
Sbjct: 15501437 tgtgtgctgtctgtgacgctcatctggggca 15501407



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                            
Query: 104      gggaatactggaacactaaaaccccaggcgtctaccactgcatctgctgtgacacccctc 163
                |||||||||||||||| |||||||| ||| ||||||| ||  ||||||||||||||||||
Sbjct: 15501761 gggaatactggaacaccaaaaccccgggcatctaccattgtgtctgctgtgacacccctc 15501702

                                
Query: 164      tgtttgagtaagcact 179
                | ||||||||||||||
Sbjct: 15501701 tttttgagtaagcact 15501686



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                            
Query: 14       catctctgagtgatgaggagttgaagaagcgcctcacaaaagaacagtattatgtcactc 73
                ||||||||| ||||||||||| || ||||||||| |||||||| ||||||||  | ||||
Sbjct: 15501938 catctctgactgatgaggagtggaggaagcgcctgacaaaagatcagtattacattactc 15501879

                          
Query: 74       ggcagaaggg 83
                ||||||||||
Sbjct: 15501878 ggcagaaggg 15501869
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>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0613F06
          Length = 184289

 Score =  125 bits (63), Expect = 2e-25
 Identities = 129/151 (85%)
 Strand = Plus / Minus

                                                                          
Query: 310    ttaggtcatctaccaagtttgatagtggtactggatggccgtcctattatcagccggttg 369
              |||||||||| ||||| ||||||||||||||||| |||||||| |||||||| ||  |||
Sbjct: 169072 ttaggtcatcgaccaaatttgatagtggtactgggtggccgtcatattatcaacccattg 169013

                                                                          
Query: 370    gcgacaatgtgaaaagcaagcttgatatgtcaatcttcttcatgcctcggaccgagtccc 429
              | || ||||| ||  |||||||||||||||| ||| | |||||||||||||| |||   |
Sbjct: 169012 gagataatgtaaagtgcaagcttgatatgtccatcatattcatgcctcggactgaggtgc 168953

                                             
Query: 430    tgtgcgctgtctgcgacgctcatctcgggca 460
              |||| |||||||| ||||||||||| |||||
Sbjct: 168952 tgtgtgctgtctgtgacgctcatctggggca 168922



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                          
Query: 104    gggaatactggaacactaaaaccccaggcgtctaccactgcatctgctgtgacacccctc 163
              |||||||||||||||| |||||||| ||| ||||||| ||  ||||||||||||||||||
Sbjct: 169276 gggaatactggaacaccaaaaccccgggcatctaccattgtgtctgctgtgacacccctc 169217

                              
Query: 164    tgtttgagtaagcact 179
              | ||||||||||||||
Sbjct: 169216 tttttgagtaagcact 169201



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                          
Query: 14     catctctgagtgatgaggagttgaagaagcgcctcacaaaagaacagtattatgtcactc 73
              ||||||||| ||||||||||| || ||||||||| |||||||| ||||||||  | ||||
Sbjct: 169453 catctctgactgatgaggagtggaggaagcgcctgacaaaagatcagtattacattactc 169394

                        
Query: 74     ggcagaaggg 83
              ||||||||||
Sbjct: 169393 ggcagaaggg 169384
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>gb|AY111038.1| Zea mays CL826_-1 mRNA sequence
          Length = 839

 Score =  111 bits (56), Expect = 3e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                       
Query: 53  aagaacagtattatgtcactcggcagaagggaactgagagggcattcacaggggaatact 112
           |||| ||||||||||| |||||||||||||| ||||| || ||||| || ||||||||||
Sbjct: 321 aagagcagtattatgttactcggcagaagggcactgaaagagcatttactggggaatact 380

                                                                   
Query: 113 ggaacactaaaaccccaggcgtctaccactgcatctgctgtgacacccctctgttt 168
           |||| ||||||||||||||| | || || ||  ||||||| |||||||||||||||
Sbjct: 381 ggaatactaaaaccccaggcatttatcagtgtgtctgctgcgacacccctctgttt 436



 Score =  103 bits (52), Expect = 7e-19
 Identities = 182/227 (80%)
 Strand = Plus / Plus

                                                                       
Query: 314 gtcatctaccaagtttgatagtggtactggatggccgtcctattatcagccggttggcga 373
           |||||| ||||| ||||||||||||||||| ||||| ||||||||| | ||  |||| ||
Sbjct: 439 gtcatcaaccaaatttgatagtggtactgggtggccatcctattataaaccaattggtga 498

                                                                       
Query: 374 caatgtgaaaagcaagcttgatatgtcaatcttcttcatgcctcggaccgagtccctgtg 433
            ||||| || |||||||||||||||||||||      ||||| |||||||||   || ||
Sbjct: 499 aaatgtcaagagcaagcttgatatgtcaatcannnnnatgccccggaccgaggtgctctg 558

                                                                       
Query: 434 cgctgtctgcgacgctcatctcgggcatgttttcgacgacgggcctccgccgacgggaaa 493
            ||   ||| || |||||||| |||||||| ||||| |||||||| || || || || ||
Sbjct: 559 tgcaacctgtgatgctcatctggggcatgtcttcgatgacgggccaccaccaacagggaa 618

                                                          
Query: 494 gagatattgcatcaacagcgcttctctgaagtttaagccccagtagt 540
           |||||| || ||||| || || |||||||| || |||||||| ||||
Sbjct: 619 gagatactgtatcaatagtgcatctctgaaattgaagccccaatagt 665
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                      
Query: 440     ctgcgacgctcatctcgggcatgttttcgacgacgggcc 478
               ||||||||| ||||||||||| || ||||||||||||||
Sbjct: 4524016 ctgcgacgcccatctcgggcacgtcttcgacgacgggcc 4524054
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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                         
Query: 92      gggcattcacaggggaatactggaac 117
               ||||||||||||||||||||||||||
Sbjct: 2408046 gggcattcacaggggaatactggaac 2408071
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 129     aggcgtctaccactgcatctgctg 152
               ||||||||||||||||||||||||
Sbjct: 4174671 aggcgtctaccactgcatctgctg 4174648
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 130     ggcgtctaccactgcatctgctg 152
               |||||||||||||||||||||||
Sbjct: 4511379 ggcgtctaccactgcatctgctg 4511357
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>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 324   aagtttgatagtggtactggatggcc 349
             |||| |||||||||||||||||||||
Sbjct: 18050 aagtatgatagtggtactggatggcc 18075
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>ref|XM_809948.1| Trypanosoma cruzi strain CL Brener short-chain dehydrogenase
           (Tc00.1047053506337.4) partial mRNA
          Length = 624

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 573 cgcgccgcatgcaaattttcg 593
           |||||||||||||||||||||
Sbjct: 236 cgcgccgcatgcaaattttcg 216
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>emb|AL360011.19| Human DNA sequence from clone RP11-103A2 on chromosome 10 Contains the
              HTR7 gene for 5-hydroxytryptamine receptor 7 (adenylate
              cyclase-coupled) and a CpG island, complete sequence
          Length = 157636

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 540    tccctggaagaagaatcaaga 560
              |||||||||||||||||||||
Sbjct: 120943 tccctggaagaagaatcaaga 120963
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>emb|BX908396.13| Zebrafish DNA sequence from clone CH211-267G5 in linkage group 18,
             complete sequence
          Length = 149493

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 583   gcaaattttcgttttggtatgaactattt 611
             |||||||||| |||||| |||||||||||
Sbjct: 47629 gcaaattttcattttgggatgaactattt 47657
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 450    catctcgggcatgttttcgacgacgggcctccgccgacggg 490
              |||||||| ||||| ||||||||||| || ||||| |||||
Sbjct: 231377 catctcggacatgtgttcgacgacggtccgccgcccacggg 231417
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>gb|DQ200260.1| Taphozous mauritianus mast cell growth factor gene, intron 5-6
          Length = 520

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 375 aatgtgaaaagcaagcttga 394
           ||||||||||||||||||||
Sbjct: 74  aatgtgaaaagcaagcttga 93
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>ref|XM_950999.1| Neurospora crassa OR74A hypothetical protein (NCU08771.1) partial
            mRNA
          Length = 1737

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 24   tgatgaggagttgaagaagc 43
            ||||||||||||||||||||
Sbjct: 1005 tgatgaggagttgaagaagc 1024
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>ref|XM_330887.1| Neurospora crassa OR74A hypothetical protein (NCU08771.1) partial
            mRNA
          Length = 1737

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 24   tgatgaggagttgaagaagc 43
            ||||||||||||||||||||
Sbjct: 1005 tgatgaggagttgaagaagc 1024
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>gb|AC140336.2| Mus musculus BAC clone RP24-266F17 from chromosome 18, complete
             sequence
          Length = 186205

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    agtgatgaggagttgaagaa 41
             ||||||||||||||||||||
Sbjct: 23844 agtgatgaggagttgaagaa 23863
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>gb|AC127256.4| Mus musculus BAC clone RP24-296G17 from chromosome 18, complete sequence
          Length = 178519

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 154    gacacccctctgtttgagtaagca 177
              ||||||||||| ||||||||||||
Sbjct: 172968 gacacccctctctttgagtaagca 172991
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>gb|AC091611.5| Homo sapiens chromosome 1 clone RP11-369L17, complete sequence
          Length = 198486

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 539    gtccctggaagaagaatcaa 558
              ||||||||||||||||||||
Sbjct: 124393 gtccctggaagaagaatcaa 124412
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>emb|CR376728.12| Zebrafish DNA sequence from clone DKEYP-30A5 in linkage group 1,
             complete sequence
          Length = 108982

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 581   atgcaaattttcgttttggt 600
             ||||||||||||||||||||
Sbjct: 41036 atgcaaattttcgttttggt 41017
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>gb|AC109280.9| Mus musculus chromosome 18, clone RP23-400B7, complete sequence
          Length = 213683

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     agtgatgaggagttgaagaa 41
              ||||||||||||||||||||
Sbjct: 116230 agtgatgaggagttgaagaa 116249
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>gb|AC145021.14| Medicago truncatula clone mth2-23a16, complete sequence
          Length = 119096

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   ttccttgtgttttaggtcat 318
             ||||||||||||||||||||
Sbjct: 18375 ttccttgtgttttaggtcat 18394
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>gb|AF398900.1| Phomopsis longicolla isolate NEB94 translation elongation factor
           1-alpha gene, partial cds
          Length = 367

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 431 gtgcgctgtctgcgacgctc 450
           ||||||||||||||||||||
Sbjct: 93  gtgcgctgtctgcgacgctc 112
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>gb|AF398899.1| Phomopsis longicolla isolate AK76 translation elongation factor
           1-alpha gene, partial cds
          Length = 367

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 431 gtgcgctgtctgcgacgctc 450
           ||||||||||||||||||||
Sbjct: 93  gtgcgctgtctgcgacgctc 112
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>gb|AF398898.1| Phomopsis longicolla isolate 95-VS-24 translation elongation factor
           1-alpha gene, partial cds
          Length = 367

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 431 gtgcgctgtctgcgacgctc 450
           ||||||||||||||||||||
Sbjct: 93  gtgcgctgtctgcgacgctc 112
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>gb|AF398897.1| Phomopsis longicolla isolate 628 translation elongation factor
           1-alpha gene, partial cds
          Length = 367

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 431 gtgcgctgtctgcgacgctc 450
           ||||||||||||||||||||
Sbjct: 93  gtgcgctgtctgcgacgctc 112
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>gb|AF398896.1| Phomopsis longicolla isolate 600 translation elongation factor
           1-alpha gene, partial cds
          Length = 367

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 431 gtgcgctgtctgcgacgctc 450
           ||||||||||||||||||||
Sbjct: 93  gtgcgctgtctgcgacgctc 112
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>gb|AF398894.1| Diaporthe phaseolorum isolate SW93-5 translation elongation factor
           1-alpha gene, partial cds
          Length = 361

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 431 gtgcgctgtctgcgacgctc 450
           ||||||||||||||||||||
Sbjct: 93  gtgcgctgtctgcgacgctc 112
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>emb|BX842631.1| Neurospora crassa DNA linkage group I BAC contig B1O14
          Length = 119219

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   tgcacctgaaatgctatctg 269
             ||||||||||||||||||||
Sbjct: 64966 tgcacctgaaatgctatctg 64947
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>emb|BX284753.1|NCB2G14 Neurospora crassa DNA linkage group II BAC clone B2G14
          Length = 53957

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    tgatgaggagttgaagaagc 43
             ||||||||||||||||||||
Sbjct: 38583 tgatgaggagttgaagaagc 38602
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>gb|AC078985.14| Homo sapiens 3q BAC RP11-82C9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 180982

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    tctgccattgtgctcattgt 285
              ||||||||||||||||||||
Sbjct: 162360 tctgccattgtgctcattgt 162379
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>dbj|AK079818.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A430076E10 product:weakly similar to
            GLUCOSAMINE-6-PHOSPHATE ISOMERASE [Homo sapiens], full
            insert sequence
          Length = 1736

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 154  gacacccctctgtttgagtaagca 177
            ||||||||||| ||||||||||||
Sbjct: 1470 gacacccctctctttgagtaagca 1447
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>ref|NM_001002094.1| Danio rerio zgc:86909 (zgc:86909), mRNA
          Length = 1983

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 65  atgtcactcggcagaagggaactgagagggcattcacagg 104
           |||| |||| ||||||||| || ||||| |||||||||||
Sbjct: 324 atgttactcagcagaagggcacagagagcgcattcacagg 363
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>dbj|AK011372.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2610011C15 product:hypothetical
           Microbodies C-terminal targeting signal containing
           protein, full insert sequence
          Length = 713

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  agtgatgaggagttgaagaa 41
           ||||||||||||||||||||
Sbjct: 268 agtgatgaggagttgaagaa 249
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>gb|BC071530.1| Danio rerio zgc:86909, mRNA (cDNA clone MGC:86909 IMAGE:6905546),
           complete cds
          Length = 1983

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 65  atgtcactcggcagaagggaactgagagggcattcacagg 104
           |||| |||| ||||||||| || ||||| |||||||||||
Sbjct: 324 atgttactcagcagaagggcacagagagcgcattcacagg 363
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>dbj|AP000610.5| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-21K8, complete
            sequence
          Length = 26000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 447  gctcatctcgggcatgtttt 466
            ||||||||||||||||||||
Sbjct: 5863 gctcatctcgggcatgtttt 5844
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>gb|AC149054.3| Mus musculus BAC clone RP23-443H21 from 18, complete sequence
          Length = 210613

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 154   gacacccctctgtttgagtaagca 177
             ||||||||||| ||||||||||||
Sbjct: 60696 gacacccctctctttgagtaagca 60719


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,130,247
Number of Sequences: 3902068
Number of extensions: 5130247
Number of successful extensions: 84652
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84434
Number of HSP's gapped (non-prelim): 218
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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