ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal27a04 |
|---|---|
| Clone Library Name | barley_pub |
>SGAT_ARATH (Q56YA5) Serine--glyoxylate aminotransferase (EC 2.6.1.45)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Serine--pyruvate aminotransferase) (EC 2.6.1.51) Length = 401 Score = 275 bits (703), Expect = 9e-74 Identities = 130/175 (74%), Positives = 148/175 (84%) Frame = +2 Query: 2 SVRVFFDWKDYLKFYKMGTYWPYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATR 181 S++VFFDW DYLKFYK+GTYWPYTPSIQ FEEGL+N+I RH RLG ATR Sbjct: 227 SLKVFFDWNDYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENIIARHARLGKATR 286 Query: 182 LAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVF 361 LAV AWGLKNCT+KEE S+TVTAV+VPP+ID SEIV+ AW+RYNLSLGLGLNKVAGKVF Sbjct: 287 LAVEAWGLKNCTQKEEWISNTVTAVMVPPHIDGSEIVRRAWQRYNLSLGLGLNKVAGKVF 346 Query: 362 RIGHLGHLNELQLLGCLGGVEMVLKDIGYPVKLGSGVAAAAAYLSNSTPLIPSRI 526 RIGHLG++NELQLLGCL GVEM+LKD+GYPV +GSGVAAA+ YL + PLIPSRI Sbjct: 347 RIGHLGNVNELQLLGCLAGVEMILKDVGYPVVMGSGVAAASTYLQHHIPLIPSRI 401
>SGAA_METEX (P55819) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)| Length = 379 Score = 176 bits (445), Expect = 7e-44 Identities = 91/162 (56%), Positives = 112/162 (69%) Frame = +2 Query: 8 RVFFDWKDYLKFYKMGTYWPYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLA 187 RV+FDW+D K G Y+PYTP + FEEGL+NV RH LG ATR A Sbjct: 211 RVYFDWEDQKKQNPTG-YFPYTPPLPLLYGLREALACLFEEGLENVYHRHAVLGEATRQA 269 Query: 188 VAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRI 367 VAAWGLK C + E SDTVTA++ P +D+++I+KHA+ RYNL+LG GL++VAGKVFRI Sbjct: 270 VAAWGLKTCAKSPEWNSDTVTAILAPEGVDAAKIIKHAYVRYNLALGAGLSQVAGKVFRI 329 Query: 368 GHLGHLNELQLLGCLGGVEMVLKDIGYPVKLGSGVAAAAAYL 493 GH+G LNEL LLG + G EM L D G V GSGVAAA++YL Sbjct: 330 GHVGDLNELSLLGAIAGAEMSLIDNGVKVTPGSGVAAASSYL 371
>SGAA_HYPME (O08374) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)| Length = 404 Score = 164 bits (416), Expect = 2e-40 Identities = 87/165 (52%), Positives = 108/165 (65%) Frame = +2 Query: 8 RVFFDWKDYLKFYKMGTYWPYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLA 187 R FF ++D +K G ++PYTP+ Q F EGLDNV RHTRL + R A Sbjct: 225 RCFFSFEDMIKTNDQG-FFPYTPATQLLRGLRTSLDLLFAEGLDNVFARHTRLASGVRAA 283 Query: 188 VAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRI 367 V AWGLK C ++ + +SDTV+A++VP IDS+ I K A+ RYN S GLGLNKVAGKVFRI Sbjct: 284 VDAWGLKLCAKEPKWYSDTVSAILVPEGIDSNAITKTAYYRYNTSFGLGLNKVAGKVFRI 343 Query: 368 GHLGHLNELQLLGCLGGVEMVLKDIGYPVKLGSGVAAAAAYLSNS 502 GHLG L+E+ + G L EM LKD G +KLGSG AAA Y S + Sbjct: 344 GHLGMLDEVMIGGALFAAEMALKDNGVNLKLGSGTGAAAEYFSKN 388
>Y959_METJA (Q58369) Putative aminotransferase MJ0959 (EC 2.6.1.-)| Length = 385 Score = 98.2 bits (243), Expect = 2e-20 Identities = 60/163 (36%), Positives = 85/163 (52%) Frame = +2 Query: 5 VRVFFDWKDYLKFYKMGTYWPYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRL 184 V + D Y K+Y+ PYTPS+ EEG++N +KRH RL ATR Sbjct: 222 VGFYLDLLAYKKYYEEKKQTPYTPSVNLTYALNVALDLVLEEGIENRVKRHERLAKATRA 281 Query: 185 AVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFR 364 + A G++ KE S TVT+ P I+ S+ +YN+ + G +AGK+FR Sbjct: 282 GLEAMGIE-LFAKERARSVTVTSAKYPEGIEDSKFRGILSNKYNIVVAGGQKHLAGKIFR 340 Query: 365 IGHLGHLNELQLLGCLGGVEMVLKDIGYPVKLGSGVAAAAAYL 493 IGH+G E ++L L VE+ LK++G+ VK SGV A L Sbjct: 341 IGHMGICGEKEVLATLACVELALKELGFEVK-ESGVEVAKEVL 382
>DHSS_ANACY (P16421) Soluble hydrogenase 42 kDa subunit (EC 1.12.-.-) (Tritium| exchange subunit) Length = 383 Score = 82.0 bits (201), Expect = 1e-15 Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 1/146 (0%) Frame = +2 Query: 65 PYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDT 244 P+TP + +EGL+++ RH R ATR A+ A L +E S Sbjct: 240 PFTPPVNLMVALHTTLGMMKKEGLESIFTRHERQKNATRAAMKALNLP-LFAADECASPA 298 Query: 245 VTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLGGVE 424 +TAV P +++ +I KR++++L G + ++ K+FR+GHLG +++ +L C+ +E Sbjct: 299 ITAVATPG-MEADKIRSLMKKRFDIALAGGQDHLSNKIFRVGHLGFVSDRDILSCIASLE 357 Query: 425 MVLKDIGYP-VKLGSGVAAAAAYLSN 499 +VL ++G+ G+GVAAAA SN Sbjct: 358 VVLLELGHENFNSGAGVAAAARVFSN 383
>DHSS_SYNP1 (P14776) Soluble hydrogenase, small subunit (EC 1.12.-.-) (Tritium| exchange subunit) Length = 384 Score = 75.5 bits (184), Expect = 1e-13 Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 1/147 (0%) Frame = +2 Query: 65 PYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDT 244 P+TP + EGL+ + +RH RL ATR A+ A L + S Sbjct: 240 PFTPPVNLFFALKTALEMMQAEGLEAIFQRHQRLMQATRAAMKALNLP-LYAADSCASPA 298 Query: 245 VTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLGGVE 424 +TAV P +++ I KR++++L G + + G++FRIGHLG + + +L + +E Sbjct: 299 ITAVA-PQGVEAENIRSLMKKRFDIALAGGQDHLKGQIFRIGHLGFVGDRDILAAVSALE 357 Query: 425 MVLKDIGYP-VKLGSGVAAAAAYLSNS 502 VL ++GY G+GVAAA+ LS + Sbjct: 358 AVLAELGYTNFTPGAGVAAASRVLSTA 384
>SGAT_MAIZE (P84187) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) Length = 136 Score = 51.6 bits (122), Expect = 2e-06 Identities = 50/153 (32%), Positives = 54/153 (35%), Gaps = 1/153 (0%) Frame = +2 Query: 2 SVRVFFDWKDYLKFYKMGTYWPYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATR 181 S RVFFDWKDYL+ TYW Y ++ LD Sbjct: 75 SPRVFFDWKDYLR-----TYWHY------------------DQALD------------LE 99 Query: 182 LAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVA-GKV 358 LAV AWGL N RYNLSLGLGLNKVA GKV Sbjct: 100 LAVEAWGLSN--------------------------------RYNLSLGLGLNKVAGGKV 127 Query: 359 FRIGHLGHLNELQLLGCLGGVEMVLKDIGYPVK 457 FR D+GYPVK Sbjct: 128 FR------------------------DVGYPVK 136
>PUCG_BACSU (O32148) Purine catabolism protein pucG (EC 2.-.-.-)| Length = 416 Score = 45.4 bits (106), Expect = 1e-04 Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 1/127 (0%) Frame = +2 Query: 125 EEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAW 304 EEGL+ +RH A + A GL+ + VT V +P ID + Sbjct: 285 EEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMP-VVTCVEIPGGIDGESVRDMLL 343 Query: 305 KRYNLSLGLGLNKVAGKVFRIGHLGH-LNELQLLGCLGGVEMVLKDIGYPVKLGSGVAAA 481 ++ + + +AGK++RIG +G+ + +L L G+E VL ++ G + AA Sbjct: 344 AQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHNAGIEAGKALQAA 403 Query: 482 AAYLSNS 502 N+ Sbjct: 404 LDVYENA 410
>SPYA_RAT (P09139) Serine--pyruvate aminotransferase, mitochondrial precursor| (EC 2.6.1.51) (SPT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 414 Score = 44.7 bits (104), Expect = 3e-04 Identities = 27/86 (31%), Positives = 40/86 (46%) Frame = +2 Query: 125 EEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAW 304 E+GL+N +RH + GLK + E T+T V VP + +IV + Sbjct: 303 EQGLENSWRRHREATAHLHKCLRELGLKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVL 362 Query: 305 KRYNLSLGLGLNKVAGKVFRIGHLGH 382 +N+ + GL KV RIG LG+ Sbjct: 363 DHFNIEISGGLGPSEDKVLRIGLLGY 388
>SPYA_CALJA (P31029) Serine--pyruvate aminotransferase, mitochondrial precursor| (EC 2.6.1.51) (SPT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 414 Score = 44.3 bits (103), Expect = 3e-04 Identities = 27/85 (31%), Positives = 41/85 (48%) Frame = +2 Query: 125 EEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAW 304 E+GL+N ++H + A GL+ + TVT V VP D +IV + Sbjct: 303 EQGLENSWRKHREAAAYLHGRLQALGLRLFVKDPALRLPTVTTVAVPTGYDWRDIVSYLI 362 Query: 305 KRYNLSLGLGLNKVAGKVFRIGHLG 379 +R+ + + GL GKV RIG +G Sbjct: 363 ERFGIEITGGLGPSTGKVLRIGLMG 387
>SPYA_HUMAN (P21549) Serine--pyruvate aminotransferase (EC 2.6.1.51) (SPT)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 392 Score = 42.0 bits (97), Expect = 0.002 Identities = 27/85 (31%), Positives = 40/85 (47%) Frame = +2 Query: 125 EEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAW 304 E+GL+N ++H + A GL+ + TVT V VP D +IV + Sbjct: 281 EQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTTVAVPAGYDWRDIVSYVI 340 Query: 305 KRYNLSLGLGLNKVAGKVFRIGHLG 379 +++ + GL GKV RIG LG Sbjct: 341 DHFDIEIMGGLGPSTGKVLRIGLLG 365
>SPYA_FELCA (P41689) Serine--pyruvate aminotransferase, mitochondrial precursor| (EC 2.6.1.51) (SPT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 414 Score = 41.2 bits (95), Expect = 0.003 Identities = 26/85 (30%), Positives = 40/85 (47%) Frame = +2 Query: 125 EEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAW 304 E+GL+N ++H + + GL+ + TVT V VP D +IV + Sbjct: 303 EQGLENSWRQHREVTAYLHGRLQGLGLQLFVKDPALRLPTVTTVAVPAGYDWRDIVNYVM 362 Query: 305 KRYNLSLGLGLNKVAGKVFRIGHLG 379 +++ + GL GKV RIG LG Sbjct: 363 DHFDIEITGGLGPSMGKVLRIGLLG 387
>SPYA_RABIT (P31030) Serine--pyruvate aminotransferase (EC 2.6.1.51) (SPT)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 392 Score = 37.4 bits (85), Expect = 0.040 Identities = 25/85 (29%), Positives = 38/85 (44%) Frame = +2 Query: 125 EEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAW 304 E+GL+ +RH + + GL+ + TVT V+VP +IV + Sbjct: 281 EQGLEKSWQRHREVAQHLYRRLQELGLQLFVKDPALRLPTVTTVIVPASYRWRDIVSYVM 340 Query: 305 KRYNLSLGLGLNKVAGKVFRIGHLG 379 + + + GL A KV RIG LG Sbjct: 341 HHFGIEITGGLGPSADKVLRIGLLG 365
>SPYA_MOUSE (O35423) Serine--pyruvate aminotransferase, mitochondrial precursor| (EC 2.6.1.51) (SPT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 413 Score = 35.8 bits (81), Expect = 0.12 Identities = 24/86 (27%), Positives = 38/86 (44%) Frame = +2 Query: 125 EEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAW 304 E GL+N +RH + GLK + E T+T V Y + +IV + Sbjct: 303 ERGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTAAGY-NWRDIVSYVL 361 Query: 305 KRYNLSLGLGLNKVAGKVFRIGHLGH 382 +++ + GL +V RIG LG+ Sbjct: 362 DHFSIEISGGLGPTEERVLRIGLLGY 387
>CEFD_NOCLA (Q03046) Isopenicillin N epimerase (EC 5.1.1.17)| Length = 398 Score = 32.7 bits (73), Expect = 0.99 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Frame = +2 Query: 122 FEEGLDN--VIKRHTRLGTATRLAVAAW-GLKNCTEKEENFSDTVTAVVVPPYIDSSEIV 292 F+ GL + V +R L TR ++ W GL+ T S +TA +PP D++ + Sbjct: 292 FQAGLGHGRVRERMRELAAFTRERLSGWRGLEPVTPAHPGLSGAMTAFRLPPGTDTAGLR 351 Query: 293 KHAWKRYNLSLGLGLNKVAGKVFRI 367 W R+ + + + L++ G + R+ Sbjct: 352 HGLWDRFRIDVPV-LDRPDGPLLRV 375
>LAS17_YEAST (Q12446) Proline-rich protein LAS17| Length = 633 Score = 32.7 bits (73), Expect = 0.99 Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Frame = -2 Query: 500 NSRGTPPRPPRRCQAS-PGTRCP*APSPPRRG 408 N+R PP PP R G R P P PPRRG Sbjct: 320 NNRPVPPPPPMRTTTEGSGVRLPAPPPPPRRG 351
>POLN_RUBVT (P13889) Nonstructural polyprotein [Contains: Protease (EC| 3.4.22.-) (p150); RNA-directed RNA polymerase/helicase (EC 2.7.7.48) (EC 3.6.1.-) (p90)] Length = 2115 Score = 31.6 bits (70), Expect = 2.2 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = -2 Query: 500 NSRGTPPRPPRRCQASPGTRCP*APSPPRRGNP 402 ++RGTPP P R P P P+PPR G+P Sbjct: 740 DARGTPPPAPAR---DPPPPAPSPPAPPRAGDP 769
>F100A_RAT (Q6AXN0) Protein FAM100A| Length = 176 Score = 31.6 bits (70), Expect = 2.2 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = -1 Query: 498 FERYAAAAATPLPSFTGYPMSLSTISTPPRQPRSCSSLRWPRWP 367 F R A+ + +G PM+ S S PP P + S P WP Sbjct: 81 FSRLKASESFHSGGSSGSPMATSATSPPPHFPHATGSFATPSWP 124
>POLG_TBEVH (Q01299) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3414 Score = 30.8 bits (68), Expect = 3.7 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Frame = +2 Query: 23 WKDYLKFYKMGTYWPYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRL------GTATRL 184 W++ ++Y Y+P TP FEEG V+ ++ RL + T L Sbjct: 798 WREVSEWYDNYAYYPETPG-----ALASAIKETFEEGSCGVVPQN-RLEMAMWRSSVTEL 851 Query: 185 AVA-AWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSL 325 +A A G N T + F T VP + + +K +WK + S+ Sbjct: 852 NLALAEGEANLTVMVDKFDPTDYRGGVPGLLKKGKDIKVSWKSWGHSM 899
>POLG_TBEVW (P14336) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3414 Score = 30.4 bits (67), Expect = 4.9 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Frame = +2 Query: 23 WKDYLKFYKMGTYWPYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRL------GTATRL 184 W++ ++Y Y+P TP FEEG V+ ++ RL + T L Sbjct: 798 WREVSEWYDNYAYYPETPG-----ALASAIKETFEEGSCGVVPQN-RLEMAMWRSSVTEL 851 Query: 185 AVA-AWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSL 325 +A A G N T + F T VP + + +K +WK + S+ Sbjct: 852 NLALAEGEANLTVVVDKFDPTDYRGGVPGLLKKGKDIKVSWKSWGHSM 899
>SGAT_WHEAT (P84188) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) Length = 78 Score = 29.6 bits (65), Expect = 8.3 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = +2 Query: 8 RVFFDWKDYLK 40 RVFFDWKDYLK Sbjct: 44 RVFFDWKDYLK 54
>YGHE_ECOLI (Q46833) Putative general secretion pathway protein L-type yghE| Length = 286 Score = 29.6 bits (65), Expect = 8.3 Identities = 17/53 (32%), Positives = 22/53 (41%) Frame = -1 Query: 522 LEGMRGVEFERYAAAAATPLPSFTGYPMSLSTISTPPRQPRSCSSLRWPRWPI 364 L G + ER A LP+ T Y + T P QPR +W RW + Sbjct: 87 LSAWAGADAERLTVTA---LPAITTYGEPEGNLLTGPWQPRVSYRKQWARWRV 136 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.136 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,974,160 Number of Sequences: 219361 Number of extensions: 1395041 Number of successful extensions: 5909 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 5238 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5881 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
