ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal27a04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483211.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1507 Score = 660 bits (333), Expect = 0.0 Identities = 480/529 (90%) Strand = Plus / Plus Query: 1 gtcggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 gtcggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 824 Query: 61 ctggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcct 120 |||||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| | Sbjct: 825 ctggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcat 884 Query: 121 cttcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgcaacaag 180 ||||||||| |||||||| ||||||||||||||||||| |||||||||||||| || || Sbjct: 885 cttcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgccaccag 944 Query: 181 gctggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagcga 240 |||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 945 gctggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagcga 1004 Query: 241 cacggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcacgc 300 ||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| Sbjct: 1005 caccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcacgc 1064 Query: 301 atggaagcggtacaacctcagcctcgggctcgggctcaacaaggtcgccggcaaggtctt 360 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 1065 ctggaagcggtacaacctcagcctcggcctcggcctcaacaaggtcgccggcaaggtgtt 1124 Query: 361 caggatcggccacctcggccacctcaacgagctgcaacttctgggttgcctcggcggggt 420 ||||||||||||||||||||||||||||||||||||| | ||||| ||| | || || Sbjct: 1125 caggatcggccacctcggccacctcaacgagctgcaattgatgggtgccctgagtggagt 1184 Query: 421 ggagatggtgctcaaggacatcgggtacccggtgaagcttggcagcggcgtggcggccgc 480 |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| || Sbjct: 1185 ggagatggtgctcaaggacatcggctacccggtgaagctcggctccggcgtggcggcggc 1244 Query: 481 ggcggcgtacctctcgaattccacgcccctcatcccctccagaatctga 529 |||||||||||| |||||||| ||||| |||||||| ||||| |||||| Sbjct: 1245 ggcggcgtacctgtcgaattcgacgccgctcatcccgtccaggatctga 1293
>ref|XM_507283.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1345_D02.38 mRNA Length = 1567 Score = 660 bits (333), Expect = 0.0 Identities = 480/529 (90%) Strand = Plus / Plus Query: 1 gtcggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 gtcggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 816 Query: 61 ctggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcct 120 |||||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| | Sbjct: 817 ctggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcat 876 Query: 121 cttcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgcaacaag 180 ||||||||| |||||||| ||||||||||||||||||| |||||||||||||| || || Sbjct: 877 cttcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgccaccag 936 Query: 181 gctggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagcga 240 |||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 937 gctggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagcga 996 Query: 241 cacggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcacgc 300 ||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| Sbjct: 997 caccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcacgc 1056 Query: 301 atggaagcggtacaacctcagcctcgggctcgggctcaacaaggtcgccggcaaggtctt 360 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 1057 ctggaagcggtacaacctcagcctcggcctcggcctcaacaaggtcgccggcaaggtgtt 1116 Query: 361 caggatcggccacctcggccacctcaacgagctgcaacttctgggttgcctcggcggggt 420 ||||||||||||||||||||||||||||||||||||| | ||||| ||| | || || Sbjct: 1117 caggatcggccacctcggccacctcaacgagctgcaattgatgggtgccctgagtggagt 1176 Query: 421 ggagatggtgctcaaggacatcgggtacccggtgaagcttggcagcggcgtggcggccgc 480 |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| || Sbjct: 1177 ggagatggtgctcaaggacatcggctacccggtgaagctcggctccggcgtggcggcggc 1236 Query: 481 ggcggcgtacctctcgaattccacgcccctcatcccctccagaatctga 529 |||||||||||| |||||||| ||||| |||||||| ||||| |||||| Sbjct: 1237 ggcggcgtacctgtcgaattcgacgccgctcatcccgtccaggatctga 1285
>dbj|AK099206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049F20, full insert sequence Length = 1321 Score = 660 bits (333), Expect = 0.0 Identities = 480/529 (90%) Strand = Plus / Plus Query: 1 gtcggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 gtcggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 590 Query: 61 ctggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcct 120 |||||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| | Sbjct: 591 ctggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcat 650 Query: 121 cttcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgcaacaag 180 ||||||||| |||||||| ||||||||||||||||||| |||||||||||||| || || Sbjct: 651 cttcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgccaccag 710 Query: 181 gctggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagcga 240 |||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 711 gctggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagcga 770 Query: 241 cacggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcacgc 300 ||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| Sbjct: 771 caccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcacgc 830 Query: 301 atggaagcggtacaacctcagcctcgggctcgggctcaacaaggtcgccggcaaggtctt 360 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 831 ctggaagcggtacaacctcagcctcggcctcggcctcaacaaggtcgccggcaaggtgtt 890 Query: 361 caggatcggccacctcggccacctcaacgagctgcaacttctgggttgcctcggcggggt 420 ||||||||||||||||||||||||||||||||||||| | ||||| ||| | || || Sbjct: 891 caggatcggccacctcggccacctcaacgagctgcaattgatgggtgccctgagtggagt 950 Query: 421 ggagatggtgctcaaggacatcgggtacccggtgaagcttggcagcggcgtggcggccgc 480 |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| || Sbjct: 951 ggagatggtgctcaaggacatcggctacccggtgaagctcggctccggcgtggcggcggc 1010 Query: 481 ggcggcgtacctctcgaattccacgcccctcatcccctccagaatctga 529 |||||||||||| |||||||| ||||| |||||||| ||||| |||||| Sbjct: 1011 ggcggcgtacctgtcgaattcgacgccgctcatcccgtccaggatctga 1059
>dbj|AK065126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P06, full insert sequence Length = 1507 Score = 660 bits (333), Expect = 0.0 Identities = 480/529 (90%) Strand = Plus / Plus Query: 1 gtcggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 gtcggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 824 Query: 61 ctggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcct 120 |||||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| | Sbjct: 825 ctggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcat 884 Query: 121 cttcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgcaacaag 180 ||||||||| |||||||| ||||||||||||||||||| |||||||||||||| || || Sbjct: 885 cttcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgccaccag 944 Query: 181 gctggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagcga 240 |||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 945 gctggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagcga 1004 Query: 241 cacggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcacgc 300 ||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| Sbjct: 1005 caccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcacgc 1064 Query: 301 atggaagcggtacaacctcagcctcgggctcgggctcaacaaggtcgccggcaaggtctt 360 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 1065 ctggaagcggtacaacctcagcctcggcctcggcctcaacaaggtcgccggcaaggtgtt 1124 Query: 361 caggatcggccacctcggccacctcaacgagctgcaacttctgggttgcctcggcggggt 420 ||||||||||||||||||||||||||||||||||||| | ||||| ||| | || || Sbjct: 1125 caggatcggccacctcggccacctcaacgagctgcaattgatgggtgccctgagtggagt 1184 Query: 421 ggagatggtgctcaaggacatcgggtacccggtgaagcttggcagcggcgtggcggccgc 480 |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| || Sbjct: 1185 ggagatggtgctcaaggacatcggctacccggtgaagctcggctccggcgtggcggcggc 1244 Query: 481 ggcggcgtacctctcgaattccacgcccctcatcccctccagaatctga 529 |||||||||||| |||||||| ||||| |||||||| ||||| |||||| Sbjct: 1245 ggcggcgtacctgtcgaattcgacgccgctcatcccgtccaggatctga 1293
>dbj|AK064774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A23, full insert sequence Length = 1567 Score = 660 bits (333), Expect = 0.0 Identities = 480/529 (90%) Strand = Plus / Plus Query: 1 gtcggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 gtcggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 816 Query: 61 ctggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcct 120 |||||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| | Sbjct: 817 ctggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcat 876 Query: 121 cttcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgcaacaag 180 ||||||||| |||||||| ||||||||||||||||||| |||||||||||||| || || Sbjct: 877 cttcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgccaccag 936 Query: 181 gctggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagcga 240 |||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 937 gctggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagcga 996 Query: 241 cacggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcacgc 300 ||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| Sbjct: 997 caccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcacgc 1056 Query: 301 atggaagcggtacaacctcagcctcgggctcgggctcaacaaggtcgccggcaaggtctt 360 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 1057 ctggaagcggtacaacctcagcctcggcctcggcctcaacaaggtcgccggcaaggtgtt 1116 Query: 361 caggatcggccacctcggccacctcaacgagctgcaacttctgggttgcctcggcggggt 420 ||||||||||||||||||||||||||||||||||||| | ||||| ||| | || || Sbjct: 1117 caggatcggccacctcggccacctcaacgagctgcaattgatgggtgccctgagtggagt 1176 Query: 421 ggagatggtgctcaaggacatcgggtacccggtgaagcttggcagcggcgtggcggccgc 480 |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| || Sbjct: 1177 ggagatggtgctcaaggacatcggctacccggtgaagctcggctccggcgtggcggcggc 1236 Query: 481 ggcggcgtacctctcgaattccacgcccctcatcccctccagaatctga 529 |||||||||||| |||||||| ||||| |||||||| ||||| |||||| Sbjct: 1237 ggcggcgtacctgtcgaattcgacgccgctcatcccgtccaggatctga 1285
>gb|AY107617.1| Zea mays PCO084394 mRNA sequence Length = 1016 Score = 472 bits (238), Expect = e-130 Identities = 454/526 (86%) Strand = Plus / Plus Query: 5 gtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcacctactgg 64 |||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||| Sbjct: 241 gtgcgcgtcttcttcgactggaaggactacctcaggttctacgacatgggcacgtactgg 300 Query: 65 ccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcctcttc 124 ||||||||||| ||||||||||||||||||||||| ||| ||| ||||||||| ||||| Sbjct: 301 ccctacacgccctccatccagctcctctacggcctccgcaccgcgctcgacctcatcttc 360 Query: 125 gaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgcaacaaggctg 184 ||||| || || ||||||||| | | |||||||| ||||| || || || || ||||| Sbjct: 361 gaggaagggctggacaacgtcgtgaggaggcacaaccgccttgggacagccaccaggctc 420 Query: 185 gcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagcgacacg 244 || || | ||||||||||||| |||||| | ||||||||||| ||||||||||| Sbjct: 421 gccgtcgaggcgtgggggctcagcaactgctgccagaaggaggagtggttcagcgacacc 480 Query: 245 gtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcacgcatgg 304 |||||||||| |||||||||||| ||||||||||| |||| |||||| |||||| ||| Sbjct: 481 gtcaccgccgccgtcgtgccgcccaacatcgacagcgccgaggtcgtcaggcacgcgtgg 540 Query: 305 aagcggtacaacctcagcctcgggctcgggctcaacaaggtcgccggcaaggtcttcagg 364 ||||||||||||||||| ||||| ||||| |||||||| |||||||| |||||||||||| Sbjct: 541 aagcggtacaacctcagtctcggcctcggcctcaacaaagtcgccgggaaggtcttcagg 600 Query: 365 atcggccacctcggccacctcaacgagctgcaacttctgggttgcctcggcggggtggag 424 |||||||| |||||| ||||||||||||||||||||||||| || || |||| |||||| Sbjct: 601 atcggccatctcggcaacctcaacgagctgcaacttctgggatgtctgagcggtgtggag 660 Query: 425 atggtgctcaaggacatcgggtacccggtgaagcttggcagcggcgtggcggccgcggcg 484 |||||||||||||| | |||||||| ||||| || || ||||||||||| ||||||||| Sbjct: 661 atggtgctcaaggatgtggggtacccagtgaaactaggtagcggcgtggcagccgcggcg 720 Query: 485 gcgtacctctcgaattccacgcccctcatcccctccagaatctgag 530 |||||||| || || |||||||| |||||||| || || ||||||| Sbjct: 721 gcgtacctgtcaaactccacgccgctcatcccatctaggatctgag 766
>emb|AJ234439.1|HVU234439 Hordeum vulgare partial mRNA; clone cMWG0725 Length = 383 Score = 301 bits (152), Expect = 2e-78 Identities = 159/160 (99%), Gaps = 1/160 (0%) Strand = Plus / Plus Query: 502 cacgcccctcatcccctccagaatctgagcaaattccacgcacaaaagcaaggggg-tcg 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1 cacgcccctcatcccctccagaatctgagcaaattccacgcacaaaagcaaggggggtcg 60 Query: 561 cgaggagaagaacaaacacgtacagtgtgccctgcttgggtctgctgctgggcacacggc 620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cgaggagaagaacaaacacgtacagtgtgccctgcttgggtctgctgctgggcacacggc 120 Query: 621 agagcacagcagagcaggcgtagtattatactctctctgt 660 |||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agagcacagcagagcaggcgtagtattatactctctctgt 160
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 287 bits (145), Expect = 2e-74 Identities = 196/213 (92%) Strand = Plus / Minus Query: 179 aggctggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagc 238 |||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 24821625 aggctggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagc 24821566 Query: 239 gacacggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcac 298 ||||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||| Sbjct: 24821565 gacaccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcac 24821506 Query: 299 gcatggaagcggtacaacctcagcctcgggctcgggctcaacaaggtcgccggcaaggtc 358 || |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 24821505 gcctggaagcggtacaacctcagcctcggcctcggcctcaacaaggtcgccggcaaggtg 24821446 Query: 359 ttcaggatcggccacctcggccacctcaacgag 391 ||||||||||||||||||||||||||||||||| Sbjct: 24821445 ttcaggatcggccacctcggccacctcaacgag 24821413 Score = 258 bits (130), Expect = 2e-65 Identities = 163/174 (93%) Strand = Plus / Minus Query: 1 gtcggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24821896 gtcggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 24821837 Query: 61 ctggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcct 120 |||||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| | Sbjct: 24821836 ctggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcat 24821777 Query: 121 cttcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgc 174 ||||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 24821776 cttcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgc 24821723 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Minus Query: 419 gtggagatggtgctcaaggacatcgggtacccggtgaagcttggcagcggcgtggcggcc 478 |||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| Sbjct: 24821293 gtggagatggtgctcaaggacatcggctacccggtgaagctcggctccggcgtggcggcg 24821234 Query: 479 gcggcggcgtacctctcgaattccacgcccctcatcccctccagaatctga 529 |||||||||||||| |||||||| ||||| |||||||| ||||| |||||| Sbjct: 24821233 gcggcggcgtacctgtcgaattcgacgccgctcatcccgtccaggatctga 24821183 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 ctcgacctcctcttcgaggag 130 ||||||||||||||||||||| Sbjct: 9175049 ctcgacctcctcttcgaggag 9175029 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 gcggcgtggcggccgcggcggcgt 488 ||||||||||||| |||||||||| Sbjct: 4755718 gcggcgtggcggcggcggcggcgt 4755695
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 287 bits (145), Expect = 2e-74 Identities = 196/213 (92%) Strand = Plus / Minus Query: 179 aggctggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagc 238 |||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 122426 aggctggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagc 122367 Query: 239 gacacggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcac 298 ||||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||| Sbjct: 122366 gacaccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcac 122307 Query: 299 gcatggaagcggtacaacctcagcctcgggctcgggctcaacaaggtcgccggcaaggtc 358 || |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 122306 gcctggaagcggtacaacctcagcctcggcctcggcctcaacaaggtcgccggcaaggtg 122247 Query: 359 ttcaggatcggccacctcggccacctcaacgag 391 ||||||||||||||||||||||||||||||||| Sbjct: 122246 ttcaggatcggccacctcggccacctcaacgag 122214 Score = 258 bits (130), Expect = 2e-65 Identities = 163/174 (93%) Strand = Plus / Minus Query: 1 gtcggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122697 gtcggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 122638 Query: 61 ctggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcct 120 |||||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| | Sbjct: 122637 ctggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcat 122578 Query: 121 cttcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgc 174 ||||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 122577 cttcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgc 122524 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Minus Query: 419 gtggagatggtgctcaaggacatcgggtacccggtgaagcttggcagcggcgtggcggcc 478 |||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| Sbjct: 122094 gtggagatggtgctcaaggacatcggctacccggtgaagctcggctccggcgtggcggcg 122035 Query: 479 gcggcggcgtacctctcgaattccacgcccctcatcccctccagaatctga 529 |||||||||||||| |||||||| ||||| |||||||| ||||| |||||| Sbjct: 122034 gcggcggcgtacctgtcgaattcgacgccgctcatcccgtccaggatctga 121984
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 287 bits (145), Expect = 2e-74 Identities = 196/213 (92%) Strand = Plus / Minus Query: 179 aggctggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagc 238 |||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 26071 aggctggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagc 26012 Query: 239 gacacggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcac 298 ||||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||| Sbjct: 26011 gacaccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcac 25952 Query: 299 gcatggaagcggtacaacctcagcctcgggctcgggctcaacaaggtcgccggcaaggtc 358 || |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 25951 gcctggaagcggtacaacctcagcctcggcctcggcctcaacaaggtcgccggcaaggtg 25892 Query: 359 ttcaggatcggccacctcggccacctcaacgag 391 ||||||||||||||||||||||||||||||||| Sbjct: 25891 ttcaggatcggccacctcggccacctcaacgag 25859 Score = 258 bits (130), Expect = 2e-65 Identities = 163/174 (93%) Strand = Plus / Minus Query: 1 gtcggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26342 gtcggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcaccta 26283 Query: 61 ctggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcct 120 |||||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| | Sbjct: 26282 ctggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcat 26223 Query: 121 cttcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgc 174 ||||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 26222 cttcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgc 26169 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Minus Query: 419 gtggagatggtgctcaaggacatcgggtacccggtgaagcttggcagcggcgtggcggcc 478 |||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| Sbjct: 25739 gtggagatggtgctcaaggacatcggctacccggtgaagctcggctccggcgtggcggcg 25680 Query: 479 gcggcggcgtacctctcgaattccacgcccctcatcccctccagaatctga 529 |||||||||||||| |||||||| ||||| |||||||| ||||| |||||| Sbjct: 25679 gcggcggcgtacctgtcgaattcgacgccgctcatcccgtccaggatctga 25629
>gb|DQ177463.1| Spirodela polyrrhiza serine-glyoxylate aminotransferase mRNA, complete cds Length = 1378 Score = 192 bits (97), Expect = 1e-45 Identities = 409/513 (79%) Strand = Plus / Plus Query: 17 ttcgactggaaggactacctcaagttctacaagatgggcacctactggccctacacgccg 76 ||||||||||| |||||||||||||||||||||||||| || |||||||| ||||| ||| Sbjct: 729 ttcgactggaacgactacctcaagttctacaagatggggacttactggccgtacaccccg 788 Query: 77 tccatccagctcctctacggcctacgcgccggcctcgacctcctcttcgaggagggcctc 136 ||||| || || || || || || || || | || |||||| | ||||||||||||||| Sbjct: 789 tccattcaactgctttatgggcttcgagctgctctggacctcatattcgaggagggcctc 848 Query: 137 gacaacgtcatcaagaggcacacacgcctcggcaccgcaacaaggctggcggtggcagcg 196 || ||||| ||| |||||||| ||||| || || ||||||||||| || |||| ||| Sbjct: 849 gagaacgtgatccggaggcacagccgcctggggacggcaacaaggcttgctgtggaagcc 908 Query: 197 tgggggctcaagaactgcaccgagaaggaggagaacttcagcgacacggtcaccgccgtc 256 ||||| || ||||||||||| ||||||||||| ||||| ||||| || || || || Sbjct: 909 tggggcctgaagaactgcacgcagaaggaggagtggttcagtgacacagtgacagcggtg 968 Query: 257 gtcgtgccgccatacatcgacagcagcgagatcgtcaagcacgcatggaagcggtacaac 316 || || || ||||||||||| |||||||||| | ||||||||||| | |||| Sbjct: 969 gtggttccaggctacatcgacagttcagagatcgtcaggagggcatggaagcgcttcaac 1028 Query: 317 ctcagcctcgggctcgggctcaacaaggtcgccggcaaggtcttcaggatcggccacctc 376 || ||| | || | ||||| |||||||| || || ||||| ||||| || || || ||| Sbjct: 1029 ctgagcttgggcttggggctgaacaaggtagctggaaaggtgttcagaatagggcatctc 1088 Query: 377 ggccacctcaacgagctgcaacttctgggttgcctcggcggggtggagatggtgctcaag 436 || || |||||||||||||||| |||| ||||| |||| |||||||||||| | | | Sbjct: 1089 ggtaacgtcaacgagctgcaactgttggggtgcctgagcggcgtggagatggtgttaagg 1148 Query: 437 gacatcgggtacccggtgaagcttggcagcggcgtggcggccgcggcggcgtacctctcg 496 ||| | |||||||||| |||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 1149 gacgtggggtacccggcgaagctaggcagcggggtggcggcagcggcggcgtatctcctc 1208 Query: 497 aattccacgcccctcatcccctccagaatctga 529 || || ||||||||||||||||| |||||| Sbjct: 1209 aacaatacccccctcatcccctccaggatctga 1241
>gb|L34038.1|RICRMSO Oryza sativa manganese superoxide dismutase (rmsod1) mRNA, complete cds Length = 951 Score = 103 bits (52), Expect = 7e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 40 gttctacaagatgggcacctactggccctacacgccgtccatccagctcctctacggcct 99 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 4 gttctacaagatgggcacctactggccctacaccccatccatccagctcctctacggcct 63
>gb|AY053359.1| Spirodela polyrhiza serine-glyoxylate aminotransferase (SGAT) mRNA, partial cds Length = 320 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Plus Query: 384 tcaacgagctgcaacttctgggttgcctcggcggggtggagatggtgctcaaggacatcg 443 |||||||||||||||| |||| ||||| |||| |||||||||||| | | |||| | | Sbjct: 38 tcaacgagctgcaactgttggggtgcctgagcggcgtggagatggtgttaagggacgtgg 97 Query: 444 ggtacccggtgaagcttggcagcggcgtggcggccgcggcggcgtacctctcgaattcca 503 |||||||||||||||| |||||||| |||||||| ||||||||||| ||| || | Sbjct: 98 ggtacccggtgaagctaggcagcggggtggcggcagcggcggcgtatctcctcaacaata 157 Query: 504 cgcccctcatcccctccagaatctga 529 | ||||||||||||||||| |||||| Sbjct: 158 cccccctcatcccctccaggatctga 183
>dbj|D86125.1| Hyphomicrobium methylovorum DNA for serine-glyoxylate aminotransferase, complete cds Length = 2303 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 tcgggctcgggctcaacaaggtcgccggcaaggtcttcaggatcggccacctcggc 379 |||| ||||| |||||||||||||||||||| |||||| | ||||||||||||||| Sbjct: 1902 tcggtctcggcctcaacaaggtcgccggcaaagtcttccgcatcggccacctcggc 1957
>gb|AF039000.1|AF039000 Fritillaria agrestis putative serine-glyoxylate aminotransferase (SGA) mRNA, complete cds Length = 1487 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 14 ttcttcgactggaaggactacctcaagttctacaagatgggcacctactggccctacacg 73 |||||||||||||| |||||||| ||||| ||||| || || || |||||||||||||| Sbjct: 809 ttcttcgactggaatgactacctaaagttttacaaaattggtacttactggccctacaca 868 Query: 74 ccgtccatcca 84 || |||||||| Sbjct: 869 ccttccatcca 879 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Plus Query: 389 gagctgcaacttctgggttgcctcggcggggtggagatggtgctcaagga 438 ||||||||| | ||||||||||| | || ||||||||||| |||||||| Sbjct: 1184 gagctgcaattgctgggttgcctgagtggtgtggagatggtactcaagga 1233
>gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete sequence Length = 113836 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 29 gactacctcaagttctacaagatgggcacctactggccctacacgccgtccatccagctc 88 |||||||| ||||||||||||||||| || || ||||| ||||| || ||||| ||||| Sbjct: 63345 gactacctgaagttctacaagatgggaacttattggccatacactccttccattcagctt 63286 Query: 89 ctcta 93 ||||| Sbjct: 63285 ctcta 63281
>gb|AE007302.1| Sinorhizobium meliloti 1021 plasmid pSymA section 108 of 121 of the complete plasmid sequence Length = 10507 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 332 gggctcaacaaggtcgccggcaaggtcttcaggatcggccacctcggccacctcaacgag 391 ||||||| |||||| || ||| ||| ||||||||||||||||||||| |||| |||||| Sbjct: 4665 gggctcagcaaggtggcgggccgggttttcaggatcggccacctcggcgacctgaacgag 4606
>gb|AY354209.1| Cucumis melo Hemed aminotransferase 2 mRNA, complete cds Length = 1436 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 14 ttcttcgactggaaggactacctcaagttctacaagatgggcacctactggccctacacg 73 ||||| |||||||||||||| ||||||||||| || | || || |||||||| ||||| Sbjct: 897 ttctttgactggaaggactatctcaagttctataacttaggaacatactggccttacact 956 Query: 74 ccgtccatcca 84 || |||||||| Sbjct: 957 ccttccatcca 967
>gb|AY354207.1| Cucumis melo Ananas Yokneam aminotransferase 2 mRNA, complete cds Length = 1230 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 14 ttcttcgactggaaggactacctcaagttctacaagatgggcacctactggccctacacg 73 ||||| |||||||||||||| ||||||||||| || | || || |||||||| ||||| Sbjct: 691 ttctttgactggaaggactatctcaagttctataacttaggaacatactggccttacact 750 Query: 74 ccgtccatcca 84 || |||||||| Sbjct: 751 ccttccatcca 761
>gb|AF461048.1| Cucumis melo aminotransferase 2 mRNA, complete cds Length = 1543 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 14 ttcttcgactggaaggactacctcaagttctacaagatgggcacctactggccctacacg 73 ||||| |||||||||||||| ||||||||||| || | || || |||||||| ||||| Sbjct: 820 ttctttgactggaaggactatctcaagttctataacttaggaacatactggccttacact 879 Query: 74 ccgtccatcca 84 || |||||||| Sbjct: 880 ccttccatcca 890
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 265 gccatacatcgacagcagcgag 286 |||||||||||||||||||||| Sbjct: 1677311 gccatacatcgacagcagcgag 1677290
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 ggcgtggcggccgcggcggcgt 488 |||||||||||||||||||||| Sbjct: 4363090 ggcgtggcggccgcggcggcgt 4363069
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 ggcgtggcggccgcggcggcgt 488 |||||||||||||||||||||| Sbjct: 4295868 ggcgtggcggccgcggcggcgt 4295847
>ref|XM_481004.1| Oryza sativa (japonica cultivar-group), mRNA Length = 492 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 ctcgacctcctcttcgaggag 130 ||||||||||||||||||||| Sbjct: 262 ctcgacctcctcttcgaggag 282
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 gcggcgtggcggccgcggcgg 485 ||||||||||||||||||||| Sbjct: 248557 gcggcgtggcggccgcggcgg 248577
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 gcgtggcggccgcggcggcgt 488 ||||||||||||||||||||| Sbjct: 34756757 gcgtggcggccgcggcggcgt 34756737 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 caccgccgtcgtcgtgccgcc 267 ||||||||||||||||||||| Sbjct: 19963313 caccgccgtcgtcgtgccgcc 19963293
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 468 gcgtggcggccgcggcggcgt 488 ||||||||||||||||||||| Sbjct: 105893 gcgtggcggccgcggcggcgt 105913
>ref|XM_842631.1| Leishmania major strain Friedlin flagellar radial spoke protein (LMJ_0701) partial mRNA Length = 1773 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 465 gcggcgtggcggccgcggcgg 485 ||||||||||||||||||||| Sbjct: 297 gcggcgtggcggccgcggcgg 277
>ref|XM_502224.1| Yarrowia lipolytica CLIB122, YALI0C24398g predicted mRNA Length = 798 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cctcagcctcgggctcgggct 336 ||||||||||||||||||||| Sbjct: 613 cctcagcctcgggctcgggct 593
>ref|XM_505045.1| Yarrowia lipolytica CLIB122, YALI0F05720g predicted mRNA Length = 366 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 gagaaggaggagaacttcagc 238 ||||||||||||||||||||| Sbjct: 227 gagaaggaggagaacttcagc 207
>emb|AL158086.32| Human DNA sequence from clone RP4-815O16 on chromosome 1p35.1-36.13 Contains the C1QA gene for complement component 1( q subcomponent, alpha polypeptide), the C1QG gene for complement component 1 (q subcomponent, gamma polypeptide), the C1QB gene for complement component 1 (q subcomponent, beta polypeptide), the 5' end of the EPHB2 gene for EphB2 and a CpG island, complete sequence Length = 87320 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 619 gcagagcacagcagagcaggc 639 ||||||||||||||||||||| Sbjct: 53106 gcagagcacagcagagcaggc 53126
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 365 atcggccacctcggccacctc 385 ||||||||||||||||||||| Sbjct: 3035988 atcggccacctcggccacctc 3036008 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tcggccacctcggccacctc 385 |||||||||||||||||||| Sbjct: 3036025 tcggccacctcggccacctc 3036044 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tcggccacctcggccacctc 385 |||||||||||||||||||| Sbjct: 3036016 tcggccacctcggccacctc 3036035 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tcggccacctcggccacctc 385 |||||||||||||||||||| Sbjct: 3036007 tcggccacctcggccacctc 3036026 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tcggccacctcggccacctc 385 |||||||||||||||||||| Sbjct: 3035998 tcggccacctcggccacctc 3036017
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 272 atcgacagcagcgagatcgtcaagc 296 |||||| |||||||||||||||||| Sbjct: 80911 atcgacggcagcgagatcgtcaagc 80887
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 gcgtggcggccgcggcggcgt 488 ||||||||||||||||||||| Sbjct: 34846829 gcgtggcggccgcggcggcgt 34846809 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 caccgccgtcgtcgtgccgcc 267 ||||||||||||||||||||| Sbjct: 19956341 caccgccgtcgtcgtgccgcc 19956321
>gb|AC090714.9| Oryza sativa chromosome 3 BAC OSJNBb0031G04 genomic sequence, complete sequence Length = 137297 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 caccgccgtcgtcgtgccgcc 267 ||||||||||||||||||||| Sbjct: 115602 caccgccgtcgtcgtgccgcc 115582
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 ctcgacctcctcttcgaggag 130 ||||||||||||||||||||| Sbjct: 110543 ctcgacctcctcttcgaggag 110523
>dbj|AP001547.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-802F5, complete sequence Length = 144493 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 gcagagcacagcagagcaggc 639 ||||||||||||||||||||| Sbjct: 115484 gcagagcacagcagagcaggc 115464
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 468 gcgtggcggccgcggcggcgt 488 ||||||||||||||||||||| Sbjct: 3418046 gcgtggcggccgcggcggcgt 3418066
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 gagaaggaggagaacttcagc 238 ||||||||||||||||||||| Sbjct: 850907 gagaaggaggagaacttcagc 850887
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 cctcagcctcgggctcgggct 336 ||||||||||||||||||||| Sbjct: 3252853 cctcagcctcgggctcgggct 3252873
>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map near S2137, complete sequence Length = 197516 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 gcggcgtggcggccgcggcggcgt 488 ||||||||||||| |||||||||| Sbjct: 175303 gcggcgtggcggcggcggcggcgt 175326
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 gcgtggcggccgcggcggcg 487 |||||||||||||||||||| Sbjct: 3198033 gcgtggcggccgcggcggcg 3198014
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 tcaccgccgtcgtcgtgccg 265 |||||||||||||||||||| Sbjct: 2380738 tcaccgccgtcgtcgtgccg 2380719
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 ccctacacgccgtccatcca 84 |||||||||||||||||||| Sbjct: 1175113 ccctacacgccgtccatcca 1175094
>ref|XM_364410.1| Magnaporthe grisea 70-15 hypothetical protein (MG09255.4) partial mRNA Length = 4989 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 tcagcctcgggctcgggctc 337 |||||||||||||||||||| Sbjct: 4142 tcagcctcgggctcgggctc 4123
>gb|AC107685.7| Mus musculus chromosome 19, clone RP24-376I6, complete sequence Length = 175566 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 cagagcacagcagagcaggc 639 |||||||||||||||||||| Sbjct: 7144 cagagcacagcagagcaggc 7163
>ref|XM_865675.1| PREDICTED: Bos taurus similar to Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4), transcript variant 1 (LOC613955), mRNA Length = 1425 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 ggcagcggcgtggcggccgc 480 |||||||||||||||||||| Sbjct: 129 ggcagcggcgtggcggccgc 110
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 gcgtggcggccgcggcggcg 487 |||||||||||||||||||| Sbjct: 783117 gcgtggcggccgcggcggcg 783136
>gb|AC148021.2| Mus musculus BAC clone RP23-9A7 from chromosome 19, complete sequence Length = 213178 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 cagagcacagcagagcaggc 639 |||||||||||||||||||| Sbjct: 6261 cagagcacagcagagcaggc 6242
>gb|AC104200.12| Mus musculus chromosome 13, clone RP24-512M2, complete sequence Length = 171912 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 568 aagaacaaacacgtacagtgtgccctgc 595 |||||||||||| ||||||||| ||||| Sbjct: 106158 aagaacaaacacctacagtgtgtcctgc 106185
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 gatcggccacctcggccacc 383 |||||||||||||||||||| Sbjct: 1519705 gatcggccacctcggccacc 1519686
>gb|AC140378.2| Mus musculus BAC clone RP24-84M18 from chromosome 19, complete sequence Length = 194681 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 cagagcacagcagagcaggc 639 |||||||||||||||||||| Sbjct: 74015 cagagcacagcagagcaggc 74034
>gb|AC124517.4| Mus musculus BAC clone RP23-387K15 from chromosome 13, complete sequence Length = 198825 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 gcagagcacagcagagcagg 638 |||||||||||||||||||| Sbjct: 75905 gcagagcacagcagagcagg 75886
>gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosome 6, complete sequence Length = 210092 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 tccacgcccctcatcccctccaga 523 |||||||||| ||||||||||||| Sbjct: 114622 tccacgccccccatcccctccaga 114645
>ref|XM_844389.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog, subfamily C, member 1, transcript variant 1 (LOC607587), mRNA Length = 2085 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tcggccacctcggccacctc 385 |||||||||||||||||||| Sbjct: 307 tcggccacctcggccacctc 326
>gb|AC160107.2| Mus musculus BAC clone RP24-252N17 from chromosome 13, complete sequence Length = 178725 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 gcagagcacagcagagcagg 638 |||||||||||||||||||| Sbjct: 6532 gcagagcacagcagagcagg 6551
>gb|BT009343.1| Triticum aestivum clone wlm4.pk0021.h10:fis, full insert mRNA sequence Length = 1639 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 cgtggcggccgcggcggcgt 488 |||||||||||||||||||| Sbjct: 477 cgtggcggccgcggcggcgt 458
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 tcggccacctcggccacctc 385 |||||||||||||||||||| Sbjct: 219968 tcggccacctcggccacctc 219949
>emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0049H08, complete sequence Length = 186642 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 gtcaccgccgtcgtcgtgccgcca 268 |||||||||||||||||| ||||| Sbjct: 116906 gtcaccgccgtcgtcgtgtcgcca 116929
>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05, complete sequence Length = 149134 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ccgccgtcgtcgtgccgcca 268 |||||||||||||||||||| Sbjct: 6481 ccgccgtcgtcgtgccgcca 6500
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 catcgacagcagcgagatcgtcaa 294 |||||||||| ||||||||||||| Sbjct: 418751 catcgacagcggcgagatcgtcaa 418774
>emb|AL355532.10| Human DNA sequence from clone RP11-487F5 on chromosome 6 Contains the 3' part of the GRIK2 (glutamate receptor, ionotropic, kainate 2) gene, ESTs, STSs and GSSs, complete sequence Length = 181302 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 591 cctgcttgggtctgctgctgggca 614 |||||||||||||||| ||||||| Sbjct: 29807 cctgcttgggtctgcttctgggca 29784
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 tcagcctcgggctcgggctc 337 |||||||||||||||||||| Sbjct: 1928477 tcagcctcgggctcgggctc 1928458
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cagcgacacggtcaccgccg 254 |||||||||||||||||||| Sbjct: 4339444 cagcgacacggtcaccgccg 4339463
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 gtcaccgccgtcgtcgtgccgcca 268 |||||||||||||||||| ||||| Sbjct: 17744530 gtcaccgccgtcgtcgtgtcgcca 17744553 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ccgccgtcgtcgtgccgcca 268 |||||||||||||||||||| Sbjct: 6843610 ccgccgtcgtcgtgccgcca 6843629
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 agcggcgtggcggccgcggcggcg 487 |||||||||||||| ||||||||| Sbjct: 19481593 agcggcgtggcggcggcggcggcg 19481570
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 gcggcgtggcggccgcggcggcgt 488 ||||||||||||| |||||||||| Sbjct: 8094684 gcggcgtggcggcggcggcggcgt 8094707
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 gtcaccgccgtcgtcgtgccgcca 268 |||||||||||||||||| ||||| Sbjct: 13542474 gtcaccgccgtcgtcgtgtcgcca 13542497
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 gcggcgtggcggccgcggcggcgt 488 ||||||||||||| |||||||||| Sbjct: 10827659 gcggcgtggcggcggcggcggcgt 10827636
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 cacggtcaccgccgtcgtcg 260 |||||||||||||||||||| Sbjct: 25401973 cacggtcaccgccgtcgtcg 25401954 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 gcggcgtggcggccgcggcggcgt 488 ||||||||||||| |||||||||| Sbjct: 9795054 gcggcgtggcggcggcggcggcgt 9795031
>gb|AC067738.17| Homo sapiens 3 BAC RP11-381H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 82883 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 580 gtacagtgtgccctgcttgggtct 603 ||||||||||| |||||||||||| Sbjct: 20356 gtacagtgtgcactgcttgggtct 20379
>gb|AC027661.1| Oryza sativa (japonica cultivar-group) BAC nbxb0049A03 chromosome 10, complete sequence Length = 162101 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 gtcaccgccgtcgtcgtgccgcca 268 |||||||||||||||||| ||||| Sbjct: 11476 gtcaccgccgtcgtcgtgtcgcca 11499
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 gcggcgtggcggccgcggcggcgt 488 ||||||||||||| |||||||||| Sbjct: 85296 gcggcgtggcggcggcggcggcgt 85273
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 cagcggcgtggcggccgcgg 482 |||||||||||||||||||| Sbjct: 610602 cagcggcgtggcggccgcgg 610583
>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19 Length = 164483 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 cacggtcaccgccgtcgtcg 260 |||||||||||||||||||| Sbjct: 75982 cacggtcaccgccgtcgtcg 75963
>dbj|AP005100.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0018O23 Length = 142143 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 gcggcgtggcggccgcggcggcgt 488 ||||||||||||| |||||||||| Sbjct: 38418 gcggcgtggcggcggcggcggcgt 38395
>dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0028O21 Length = 134543 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 gcggcgtggcggccgcggcggcgt 488 ||||||||||||| |||||||||| Sbjct: 4034 gcggcgtggcggcggcggcggcgt 4011
>dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0455A11 Length = 158629 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 gcggcgtggcggccgcggcggcgt 488 ||||||||||||| |||||||||| Sbjct: 113734 gcggcgtggcggcggcggcggcgt 113711
>dbj|AK107643.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-F04, full insert sequence Length = 2051 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 cacggtcaccgccgtcgtcg 260 |||||||||||||||||||| Sbjct: 28 cacggtcaccgccgtcgtcg 9
>dbj|AK099684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072A20, full insert sequence Length = 1406 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 agcggcgtggcggccgcggcggcg 487 |||||||||||||| ||||||||| Sbjct: 96 agcggcgtggcggcggcggcggcg 73
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cagcgacacggtcaccgccg 254 |||||||||||||||||||| Sbjct: 4346284 cagcgacacggtcaccgccg 4346303
>dbj|AP006198.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-410D4, complete sequence Length = 139671 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 591 cctgcttgggtctgctgctgggca 614 |||||||||||||||| ||||||| Sbjct: 66762 cctgcttgggtctgcttctgggca 66739
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 gacctcctcttcgaggagggcctcgaca 140 ||||||||||| ||||||||| |||||| Sbjct: 2193189 gacctcctcttggaggagggcgtcgaca 2193162 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 376 cggccacctcaacgagctgcaact 399 |||| ||||||||||||||||||| Sbjct: 594751 cggcgacctcaacgagctgcaact 594728
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 gtcaccgccgtcgtcgtgccgcca 268 |||||||||||||||||| ||||| Sbjct: 13549816 gtcaccgccgtcgtcgtgtcgcca 13549839
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 gcggcgtggcggccgcggcggcgt 488 ||||||||||||| |||||||||| Sbjct: 8164514 gcggcgtggcggcggcggcggcgt 8164537
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 agcggcgtggcggccgcggcggcg 487 |||||||||||||| ||||||||| Sbjct: 19407806 agcggcgtggcggcggcggcggcg 19407783
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 gatcgtcaagcacgcatgga 305 |||||||||||||||||||| Sbjct: 230803 gatcgtcaagcacgcatgga 230822
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 agcggcgtggcggccgcggcggcg 487 |||||||||||||| ||||||||| Sbjct: 159287 agcggcgtggcggcggcggcggcg 159264
>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144596 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 agcggcgtggcggccgcggcggcg 487 |||||||||||||| ||||||||| Sbjct: 13774 agcggcgtggcggcggcggcggcg 13751
>gb|AF005899.1|AF005899 Salmonella gallinarum virulence plasmid minor fimbrial subunit genes, complete cds Length = 3252 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cgccgtcgtcgtgccgccat 269 |||||||||||||||||||| Sbjct: 2002 cgccgtcgtcgtgccgccat 1983
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 cggcgtggcggccgcggcgg 485 |||||||||||||||||||| Sbjct: 2677528 cggcgtggcggccgcggcgg 2677509
>dbj|AP002530.2| Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section 3/4 Length = 300000 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 591 cctgcttgggtctgctgctgggca 614 |||||||||||||||| ||||||| Sbjct: 152058 cctgcttgggtctgcttctgggca 152035
>dbj|AB042030.1| Homo sapiens genomic DNA, chromosome 6q21, BAC clone:610J6, complete sequence Length = 111927 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 591 cctgcttgggtctgctgctgggca 614 |||||||||||||||| ||||||| Sbjct: 87082 cctgcttgggtctgcttctgggca 87059 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,066,012 Number of Sequences: 3902068 Number of extensions: 5066012 Number of successful extensions: 118647 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114793 Number of HSP's gapped (non-prelim): 3847 length of query: 660 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 637 effective length of database: 17,143,297,704 effective search space: 10920280637448 effective search space used: 10920280637448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
