| Clone Name | baal26k11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CF010_HUMAN (Q5SRN2) Protein C6orf10 | 35 | 0.21 | 2 | COX3_CANPA (Q34214) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) ... | 31 | 3.0 | 3 | ABCG3_MOUSE (Q99P81) ATP-binding cassette sub-family G member 3 | 30 | 5.1 | 4 | CIC_HUMAN (Q96RK0) Protein capicua homolog | 29 | 8.7 | 5 | LUZP1_RAT (Q9ESV1) Leucine zipper protein 1 (Leucine zipper moti... | 29 | 8.7 | 6 | TLL2_HUMAN (Q9Y6L7) Tolloid-like protein 2 precursor (EC 3.4.24.-) | 29 | 8.7 |
|---|
>CF010_HUMAN (Q5SRN2) Protein C6orf10| Length = 563 Score = 34.7 bits (78), Expect = 0.21 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = +1 Query: 16 EGAGIGQD-TQIDRGVATQVGPSIHRRPAGKSCAKDRSGLIIINGAKPRISAPRNGVTQR 192 +GA I + + + RG +QV S P G+ +SGL+++ G + ++ GV +R Sbjct: 319 QGAQIKKSVSDVPRGQESQVKKSESGVPKGQEAQVTKSGLVVLKGQEAQVEKSEMGVPRR 378 Query: 193 KRSSVTTS 216 + S V S Sbjct: 379 QESQVKKS 386
>COX3_CANPA (Q34214) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) (Cytochrome oxidase subunit 3) Length = 269 Score = 30.8 bits (68), Expect = 3.0 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = +2 Query: 419 LHELILPNFAPLKSWIKWGRNFRIFRDTGVFVTISYLLLLDISWRFVSLAIF 574 LH ++L + +W + +F G TI YL +LD+ W F+ + ++ Sbjct: 214 LHMIMLTIMLVICTWRVYNYDFTNTSHVGAETTILYLHVLDVIWLFIYIIVY 265
>ABCG3_MOUSE (Q99P81) ATP-binding cassette sub-family G member 3| Length = 650 Score = 30.0 bits (66), Expect = 5.1 Identities = 14/56 (25%), Positives = 27/56 (48%) Frame = +2 Query: 377 TMEFAICYSYIFLKLHELILPNFAPLKSWIKWGRNFRIFRDTGVFVTISYLLLLDI 544 T E + C++Y+ E ++ L SW W + + + +TI+Y+ LL + Sbjct: 589 TEEVSRCHNYVICTGEEFLMIQGIDLSSWGFWENHLALVCTMIILLTITYVQLLQV 644
>CIC_HUMAN (Q96RK0) Protein capicua homolog| Length = 1608 Score = 29.3 bits (64), Expect = 8.7 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = +3 Query: 33 PRYTDRSRSSHTSRPIDPPAASWEILCEGPKWTYNNQWGEAEDLSTE 173 P+ R RSS +S P P +A CEG +T++ EAED+ E Sbjct: 1410 PKRKMRRRSSCSSEPNTPKSAK----CEGDIFTFDRTGTEAEDVLGE 1452
>LUZP1_RAT (Q9ESV1) Leucine zipper protein 1 (Leucine zipper motif-containing| protein) Length = 1051 Score = 29.3 bits (64), Expect = 8.7 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 9/40 (22%) Frame = -3 Query: 354 SLLVKPSSSLNRNT---------WKLQTVLSSVQAAATRH 262 S+L+KPS S+ RN+ WK + S V ++ TRH Sbjct: 879 SILIKPSDSVERNSHAFPAETIRWKSHSTSSEVASSDTRH 918
>TLL2_HUMAN (Q9Y6L7) Tolloid-like protein 2 precursor (EC 3.4.24.-)| Length = 1015 Score = 29.3 bits (64), Expect = 8.7 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = +1 Query: 412 FEIARVDLAQLCTLEVVDQMGS*LPDFQRHGRFCDYILP-VITGHQLEIRL 561 FE+ ++ +C + V+ PD + HGRFC P VIT +R+ Sbjct: 662 FEVFELEGNDVCKYDFVEVRSGLSPDAKLHGRFCGSETPEVITSQSNNMRV 712 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,587,294 Number of Sequences: 219361 Number of extensions: 2005222 Number of successful extensions: 5209 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5057 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5209 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)