ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal26k11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CF010_HUMAN (Q5SRN2) Protein C6orf10 35 0.21
2COX3_CANPA (Q34214) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) ... 31 3.0
3ABCG3_MOUSE (Q99P81) ATP-binding cassette sub-family G member 3 30 5.1
4CIC_HUMAN (Q96RK0) Protein capicua homolog 29 8.7
5LUZP1_RAT (Q9ESV1) Leucine zipper protein 1 (Leucine zipper moti... 29 8.7
6TLL2_HUMAN (Q9Y6L7) Tolloid-like protein 2 precursor (EC 3.4.24.-) 29 8.7

>CF010_HUMAN (Q5SRN2) Protein C6orf10|
          Length = 563

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +1

Query: 16  EGAGIGQD-TQIDRGVATQVGPSIHRRPAGKSCAKDRSGLIIINGAKPRISAPRNGVTQR 192
           +GA I +  + + RG  +QV  S    P G+     +SGL+++ G + ++     GV +R
Sbjct: 319 QGAQIKKSVSDVPRGQESQVKKSESGVPKGQEAQVTKSGLVVLKGQEAQVEKSEMGVPRR 378

Query: 193 KRSSVTTS 216
           + S V  S
Sbjct: 379 QESQVKKS 386



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>COX3_CANPA (Q34214) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide III) (Cytochrome oxidase subunit 3)
          Length = 269

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +2

Query: 419 LHELILPNFAPLKSWIKWGRNFRIFRDTGVFVTISYLLLLDISWRFVSLAIF 574
           LH ++L     + +W  +  +F      G   TI YL +LD+ W F+ + ++
Sbjct: 214 LHMIMLTIMLVICTWRVYNYDFTNTSHVGAETTILYLHVLDVIWLFIYIIVY 265



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>ABCG3_MOUSE (Q99P81) ATP-binding cassette sub-family G member 3|
          Length = 650

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +2

Query: 377 TMEFAICYSYIFLKLHELILPNFAPLKSWIKWGRNFRIFRDTGVFVTISYLLLLDI 544
           T E + C++Y+     E ++     L SW  W  +  +     + +TI+Y+ LL +
Sbjct: 589 TEEVSRCHNYVICTGEEFLMIQGIDLSSWGFWENHLALVCTMIILLTITYVQLLQV 644



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>CIC_HUMAN (Q96RK0) Protein capicua homolog|
          Length = 1608

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +3

Query: 33   PRYTDRSRSSHTSRPIDPPAASWEILCEGPKWTYNNQWGEAEDLSTE 173
            P+   R RSS +S P  P +A     CEG  +T++    EAED+  E
Sbjct: 1410 PKRKMRRRSSCSSEPNTPKSAK----CEGDIFTFDRTGTEAEDVLGE 1452



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>LUZP1_RAT (Q9ESV1) Leucine zipper protein 1 (Leucine zipper motif-containing|
           protein)
          Length = 1051

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 9/40 (22%)
 Frame = -3

Query: 354 SLLVKPSSSLNRNT---------WKLQTVLSSVQAAATRH 262
           S+L+KPS S+ RN+         WK  +  S V ++ TRH
Sbjct: 879 SILIKPSDSVERNSHAFPAETIRWKSHSTSSEVASSDTRH 918



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>TLL2_HUMAN (Q9Y6L7) Tolloid-like protein 2 precursor (EC 3.4.24.-)|
          Length = 1015

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 412 FEIARVDLAQLCTLEVVDQMGS*LPDFQRHGRFCDYILP-VITGHQLEIRL 561
           FE+  ++   +C  + V+      PD + HGRFC    P VIT     +R+
Sbjct: 662 FEVFELEGNDVCKYDFVEVRSGLSPDAKLHGRFCGSETPEVITSQSNNMRV 712


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,587,294
Number of Sequences: 219361
Number of extensions: 2005222
Number of successful extensions: 5209
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5209
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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