| Clone Name | baal26i24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK099852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110D09, full insert sequence Length = 4971 Score = 567 bits (286), Expect = e-158 Identities = 519/596 (87%), Gaps = 3/596 (0%) Strand = Plus / Plus Query: 41 ttgcaaagacttcgtgaatttgttcgctctgagtatgatcattcatgcttaaggtcttgc 100 |||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||| Sbjct: 3255 ttgcaaagacttcgtgaatttgttcgctctgagtatgaccattcgtgcttacgttcttgc 3314 Query: 101 cgttcacgtgcgctttatgaaggtctcaaggtgactgcaaccccagatctaatgttggga 160 ||||||||||||||||||||||| ||||||||||||||||| || ||||| ||| |||| Sbjct: 3315 cgttcacgtgcgctttatgaagggctcaaggtgactgcaactcctgatcttatgctgggc 3374 Query: 161 tatttagatttcttccttggtggagatgagaaaagacctgatcttcctcctagacttcgt 220 |||||||||||||||||||| |||||||| ||||| ||||||||||| ||| | ||||| Sbjct: 3375 tatttagatttcttccttgggggagatgaaaaaaggcctgatcttccacctcgtcttcgc 3434 Query: 221 cagaggtttccgatgtcgttgatttttggtggtgatggaagttacatggctccattttca 280 || |||||||| |||| ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 3435 caaaggtttccaatgtgcttgatctttggaggtgatggaagttacatggctccattttca 3494 Query: 281 cttcatagtgacagtgtgctgaccagtcttatgagccaggctgtgcaaccttggatatgg 340 || |||||||| ||||| || || || |||||||| |||||||| | | | ||||||| Sbjct: 3495 ctccatagtgatagtgtactcactagccttatgagtcaggctgttccctcatcgatatgg 3554 Query: 341 caccgtcttgtagctggattgaatgctcagttgcgtttggttcgacgtggaaatctcaaa 400 |||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| | Sbjct: 3555 caccgtcttgcagctggattgaatgcccagttgcgtttggttcgacgtggaagtctcaga 3614 Query: 401 gcaacatttcttcctgtccttgactggcttgaaactcacgcggatcctgctttgggtgcg 460 | |||||||||||||||||| |||||||||||||| || || |||| || |||||| | Sbjct: 3615 ggaacatttcttcctgtcctcgactggcttgaaacccatgctaatccctctctgggtgtg 3674 Query: 461 aatggtgtccgtgtcgatcttgcgtggttccaagctacagcgttagggtattgccaactt 520 |||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 3675 aatggtgttcgtgttgatcttgcctggttccaagctacagcattagggtattgccaactt 3734 Query: 521 ggtcttgttgtttacactgtcgagggcgaaccagttactgctgaacttgatggcagccca 580 |||||||| ||||| |||| || |||||| | | ||| || |||||||| ||||| Sbjct: 3735 ggtcttgtcgtttatgctgttga---agaaccaatgagtgcagagcttgatggtagccct 3791 Query: 581 agaattaaaacagaacagcattcactaatgcaggacatgcttgctgatgctcaact 636 |||||||||| ||| || |||||||||| ||| |||||| ||||||| ||||||| Sbjct: 3792 agaattaaaatagagcaacattcactaacacagaacatgcatgctgatactcaact 3847
>ref|NM_189635.1| Oryza sativa (japonica cultivar-group), Ozsa8063 predicted mRNA Length = 4227 Score = 555 bits (280), Expect = e-155 Identities = 495/566 (87%), Gaps = 3/566 (0%) Strand = Plus / Plus Query: 41 ttgcaaagacttcgtgaatttgttcgctctgagtatgatcattcatgcttaaggtcttgc 100 |||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||| Sbjct: 3079 ttgcaaagacttcgtgaatttgttcgctctgagtatgaccattcgtgcttacgttcttgc 3138 Query: 101 cgttcacgtgcgctttatgaaggtctcaaggtgactgcaaccccagatctaatgttggga 160 ||||||||||||||||||||||| ||||||||||||||||| || ||||| ||| |||| Sbjct: 3139 cgttcacgtgcgctttatgaagggctcaaggtgactgcaactcctgatcttatgctgggc 3198 Query: 161 tatttagatttcttccttggtggagatgagaaaagacctgatcttcctcctagacttcgt 220 |||||||||||||||||||| |||||||| ||||| ||||||||||| ||| | ||||| Sbjct: 3199 tatttagatttcttccttgggggagatgaaaaaaggcctgatcttccacctcgtcttcgc 3258 Query: 221 cagaggtttccgatgtcgttgatttttggtggtgatggaagttacatggctccattttca 280 || |||||||| |||| ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 3259 caaaggtttccaatgtgcttgatctttggaggtgatggaagttacatggctccattttca 3318 Query: 281 cttcatagtgacagtgtgctgaccagtcttatgagccaggctgtgcaaccttggatatgg 340 || |||||||| ||||| || || || |||||||| |||||||| | | | ||||||| Sbjct: 3319 ctccatagtgatagtgtactcactagccttatgagtcaggctgttccctcatcgatatgg 3378 Query: 341 caccgtcttgtagctggattgaatgctcagttgcgtttggttcgacgtggaaatctcaaa 400 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| | Sbjct: 3379 caccgtcttgtagctggattgaatgcccagttgcgtttggttcgacgtggaagtctcaga 3438 Query: 401 gcaacatttcttcctgtccttgactggcttgaaactcacgcggatcctgctttgggtgcg 460 | |||||||||||||||||| |||||||||||||| || || |||| || |||||| | Sbjct: 3439 ggaacatttcttcctgtcctcgactggcttgaaacccatgctaatccctctctgggtgtg 3498 Query: 461 aatggtgtccgtgtcgatcttgcgtggttccaagctacagcgttagggtattgccaactt 520 |||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 3499 aatggtgttcgtgttgatcttgcctggttccaagctacagcattagggtattgccaactt 3558 Query: 521 ggtcttgttgtttacactgtcgagggcgaaccagttactgctgaacttgatggcagccca 580 |||||||| ||||| |||| || |||||| | | ||| || |||||||| ||||| Sbjct: 3559 ggtcttgtcgtttatgctgttga---agaaccaatgagtgcagagcttgatggtagccct 3615 Query: 581 agaattaaaacagaacagcattcact 606 |||||||||| ||| || |||||||| Sbjct: 3616 agaattaaaatagagcaacattcact 3641
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 260 bits (131), Expect = 5e-66 Identities = 238/273 (87%), Gaps = 3/273 (1%) Strand = Plus / Plus Query: 334 gatatggcaccgtcttgtagctggattgaatgctcagttgcgtttggttcgacgtggaaa 393 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4681859 gatatggcaccgtcttgtagctggattgaatgcccagttgcgtttggttcgacgtggaag 4681918 Query: 394 tctcaaagcaacatttcttcctgtccttgactggcttgaaactcacgcggatcctgcttt 453 ||||| || |||||||||||||||||| |||||||||||||| || || |||| || | Sbjct: 4681919 tctcagaggaacatttcttcctgtcctcgactggcttgaaacccatgctaatccctctct 4681978 Query: 454 gggtgcgaatggtgtccgtgtcgatcttgcgtggttccaagctacagcgttagggtattg 513 ||||| ||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 4681979 gggtgtgaatggtgttcgtgttgatcttgcctggttccaagctacagcattagggtattg 4682038 Query: 514 ccaacttggtcttgttgtttacactgtcgagggcgaaccagttactgctgaacttgatgg 573 ||||||||||||||| ||||| |||| || |||||| | | ||| || |||||||| Sbjct: 4682039 ccaacttggtcttgtcgtttatgctgttga---agaaccaatgagtgcagagcttgatgg 4682095 Query: 574 cagcccaagaattaaaacagaacagcattcact 606 ||||| |||||||||| ||| || |||||||| Sbjct: 4682096 tagccctagaattaaaatagagcaacattcact 4682128 Score = 182 bits (92), Expect = 9e-43 Identities = 167/192 (86%) Strand = Plus / Plus Query: 129 aggtgactgcaaccccagatctaatgttgggatatttagatttcttccttggtggagatg 188 ||||||||||||| || ||||| ||| |||| |||||||||||||||||||| ||||||| Sbjct: 4681568 aggtgactgcaactcctgatcttatgctgggctatttagatttcttccttgggggagatg 4681627 Query: 189 agaaaagacctgatcttcctcctagacttcgtcagaggtttccgatgtcgttgatttttg 248 | ||||| ||||||||||| ||| | ||||| || |||||||| |||| ||||| |||| Sbjct: 4681628 aaaaaaggcctgatcttccacctcgtcttcgccaaaggtttccaatgtgcttgatctttg 4681687 Query: 249 gtggtgatggaagttacatggctccattttcacttcatagtgacagtgtgctgaccagtc 308 | |||||||||||||||||||||||||||||||| |||||||| ||||| || || || | Sbjct: 4681688 gaggtgatggaagttacatggctccattttcactccatagtgatagtgtactcactagcc 4681747 Query: 309 ttatgagccagg 320 ||||||| |||| Sbjct: 4681748 ttatgagtcagg 4681759 Score = 143 bits (72), Expect = 8e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 41 ttgcaaagacttcgtgaatttgttcgctctgagtatgatcattcatgcttaaggtcttgc 100 |||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||| Sbjct: 4680977 ttgcaaagacttcgtgaatttgttcgctctgagtatgaccattcgtgcttacgttcttgc 4681036 Query: 101 cgttcacgtgcgctttatgaaggtctcaaggt 132 ||||||||||||||||||||||| |||||||| Sbjct: 4681037 cgttcacgtgcgctttatgaagggctcaaggt 4681068
>dbj|AP002836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512G09 Length = 146921 Score = 260 bits (131), Expect = 5e-66 Identities = 238/273 (87%), Gaps = 3/273 (1%) Strand = Plus / Plus Query: 334 gatatggcaccgtcttgtagctggattgaatgctcagttgcgtttggttcgacgtggaaa 393 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 42104 gatatggcaccgtcttgtagctggattgaatgcccagttgcgtttggttcgacgtggaag 42163 Query: 394 tctcaaagcaacatttcttcctgtccttgactggcttgaaactcacgcggatcctgcttt 453 ||||| || |||||||||||||||||| |||||||||||||| || || |||| || | Sbjct: 42164 tctcagaggaacatttcttcctgtcctcgactggcttgaaacccatgctaatccctctct 42223 Query: 454 gggtgcgaatggtgtccgtgtcgatcttgcgtggttccaagctacagcgttagggtattg 513 ||||| ||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 42224 gggtgtgaatggtgttcgtgttgatcttgcctggttccaagctacagcattagggtattg 42283 Query: 514 ccaacttggtcttgttgtttacactgtcgagggcgaaccagttactgctgaacttgatgg 573 ||||||||||||||| ||||| |||| || |||||| | | ||| || |||||||| Sbjct: 42284 ccaacttggtcttgtcgtttatgctgttga---agaaccaatgagtgcagagcttgatgg 42340 Query: 574 cagcccaagaattaaaacagaacagcattcact 606 ||||| |||||||||| ||| || |||||||| Sbjct: 42341 tagccctagaattaaaatagagcaacattcact 42373 Score = 182 bits (92), Expect = 9e-43 Identities = 167/192 (86%) Strand = Plus / Plus Query: 129 aggtgactgcaaccccagatctaatgttgggatatttagatttcttccttggtggagatg 188 ||||||||||||| || ||||| ||| |||| |||||||||||||||||||| ||||||| Sbjct: 41813 aggtgactgcaactcctgatcttatgctgggctatttagatttcttccttgggggagatg 41872 Query: 189 agaaaagacctgatcttcctcctagacttcgtcagaggtttccgatgtcgttgatttttg 248 | ||||| ||||||||||| ||| | ||||| || |||||||| |||| ||||| |||| Sbjct: 41873 aaaaaaggcctgatcttccacctcgtcttcgccaaaggtttccaatgtgcttgatctttg 41932 Query: 249 gtggtgatggaagttacatggctccattttcacttcatagtgacagtgtgctgaccagtc 308 | |||||||||||||||||||||||||||||||| |||||||| ||||| || || || | Sbjct: 41933 gaggtgatggaagttacatggctccattttcactccatagtgatagtgtactcactagcc 41992 Query: 309 ttatgagccagg 320 ||||||| |||| Sbjct: 41993 ttatgagtcagg 42004 Score = 143 bits (72), Expect = 8e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 41 ttgcaaagacttcgtgaatttgttcgctctgagtatgatcattcatgcttaaggtcttgc 100 |||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||| Sbjct: 41222 ttgcaaagacttcgtgaatttgttcgctctgagtatgaccattcgtgcttacgttcttgc 41281 Query: 101 cgttcacgtgcgctttatgaaggtctcaaggt 132 ||||||||||||||||||||||| |||||||| Sbjct: 41282 cgttcacgtgcgctttatgaagggctcaaggt 41313
>dbj|AP002816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695A04 Length = 158133 Score = 260 bits (131), Expect = 5e-66 Identities = 238/273 (87%), Gaps = 3/273 (1%) Strand = Plus / Plus Query: 334 gatatggcaccgtcttgtagctggattgaatgctcagttgcgtttggttcgacgtggaaa 393 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 89075 gatatggcaccgtcttgtagctggattgaatgcccagttgcgtttggttcgacgtggaag 89134 Query: 394 tctcaaagcaacatttcttcctgtccttgactggcttgaaactcacgcggatcctgcttt 453 ||||| || |||||||||||||||||| |||||||||||||| || || |||| || | Sbjct: 89135 tctcagaggaacatttcttcctgtcctcgactggcttgaaacccatgctaatccctctct 89194 Query: 454 gggtgcgaatggtgtccgtgtcgatcttgcgtggttccaagctacagcgttagggtattg 513 ||||| ||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 89195 gggtgtgaatggtgttcgtgttgatcttgcctggttccaagctacagcattagggtattg 89254 Query: 514 ccaacttggtcttgttgtttacactgtcgagggcgaaccagttactgctgaacttgatgg 573 ||||||||||||||| ||||| |||| || |||||| | | ||| || |||||||| Sbjct: 89255 ccaacttggtcttgtcgtttatgctgttga---agaaccaatgagtgcagagcttgatgg 89311 Query: 574 cagcccaagaattaaaacagaacagcattcact 606 ||||| |||||||||| ||| || |||||||| Sbjct: 89312 tagccctagaattaaaatagagcaacattcact 89344 Score = 182 bits (92), Expect = 9e-43 Identities = 167/192 (86%) Strand = Plus / Plus Query: 129 aggtgactgcaaccccagatctaatgttgggatatttagatttcttccttggtggagatg 188 ||||||||||||| || ||||| ||| |||| |||||||||||||||||||| ||||||| Sbjct: 88784 aggtgactgcaactcctgatcttatgctgggctatttagatttcttccttgggggagatg 88843 Query: 189 agaaaagacctgatcttcctcctagacttcgtcagaggtttccgatgtcgttgatttttg 248 | ||||| ||||||||||| ||| | ||||| || |||||||| |||| ||||| |||| Sbjct: 88844 aaaaaaggcctgatcttccacctcgtcttcgccaaaggtttccaatgtgcttgatctttg 88903 Query: 249 gtggtgatggaagttacatggctccattttcacttcatagtgacagtgtgctgaccagtc 308 | |||||||||||||||||||||||||||||||| |||||||| ||||| || || || | Sbjct: 88904 gaggtgatggaagttacatggctccattttcactccatagtgatagtgtactcactagcc 88963 Query: 309 ttatgagccagg 320 ||||||| |||| Sbjct: 88964 ttatgagtcagg 88975 Score = 143 bits (72), Expect = 8e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 41 ttgcaaagacttcgtgaatttgttcgctctgagtatgatcattcatgcttaaggtcttgc 100 |||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||| Sbjct: 88193 ttgcaaagacttcgtgaatttgttcgctctgagtatgaccattcgtgcttacgttcttgc 88252 Query: 101 cgttcacgtgcgctttatgaaggtctcaaggt 132 ||||||||||||||||||||||| |||||||| Sbjct: 88253 cgttcacgtgcgctttatgaagggctcaaggt 88284
>gb|AC165174.2| Zea mays clone ZMMBBb-127F19, complete sequence Length = 187659 Score = 230 bits (116), Expect = 4e-57 Identities = 173/192 (90%) Strand = Plus / Plus Query: 129 aggtgactgcaaccccagatctaatgttgggatatttagatttcttccttggtggagatg 188 |||||||||||||||||||||||||| | || |||||||||||||||||||| ||||||| Sbjct: 68201 aggtgactgcaaccccagatctaatgctagggtatttagatttcttccttgggggagatg 68260 Query: 189 agaaaagacctgatcttcctcctagacttcgtcagaggtttccgatgtcgttgatttttg 248 | ||||| ||||||||||| ||| | |||||||| |||||||| ||||| |||| |||| Sbjct: 68261 aaaaaaggcctgatcttccacctcgtcttcgtcaaaggtttccaatgtccctgatctttg 68320 Query: 249 gtggtgatggaagttacatggctccattttcacttcatagtgacagtgtgctgaccagtc 308 | ||||||||||||||||||||||| ||||||||| |||||||||||||||| || |||| Sbjct: 68321 gaggtgatggaagttacatggctccgttttcacttaatagtgacagtgtgcttactagtc 68380 Query: 309 ttatgagccagg 320 |||||||||||| Sbjct: 68381 ttatgagccagg 68392 Score = 188 bits (95), Expect = 2e-44 Identities = 176/203 (86%) Strand = Plus / Plus Query: 332 tggatatggcaccgtcttgtagctggattgaatgctcagttgcgtttggttcgacgtgga 391 ||||||||||||||||||||||||||||||||||| ||| |||||||||| || ||||| Sbjct: 68484 tggatatggcaccgtcttgtagctggattgaatgcacagctgcgtttggtccgtggtgga 68543 Query: 392 aatctcaaagcaacatttcttcctgtccttgactggcttgaaactcacgcggatcctgct 451 ||||| |||| ||| |||||||| ||| | ||||||||||| |||| || |||| || Sbjct: 68544 aatctgaaagtaacgtttcttccggtcatcaactggcttgaatctcatgcaaatccctct 68603 Query: 452 ttgggtgcgaatggtgtccgtgtcgatcttgcgtggttccaagctacagcgttagggtat 511 || | || ||||||| ||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 68604 ttagctgagaatggtatccgtgttgatcttgcctggttccaagctacagcattagggtac 68663 Query: 512 tgccaacttggtcttgttgttta 534 ||||||||||||||| ||||||| Sbjct: 68664 tgccaacttggtcttcttgttta 68686 Score = 123 bits (62), Expect = 7e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 47 agacttcgtgaatttgttcgctctgagtatgatcattcatgcttaaggtcttgccgttca 106 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 67496 agacttcgtgaatttgttcgctctgaatatgatcattcatgcttaaagtcttgccgttca 67555 Query: 107 cgtgcgctttatgaaggtctcaaggt 132 ||||| || || ||||| |||||||| Sbjct: 67556 cgtgcactctacgaaggcctcaaggt 67581
>gb|AC165173.2| Zea mays clone ZMMBBb-125O19, complete sequence Length = 157660 Score = 188 bits (95), Expect = 2e-44 Identities = 176/203 (86%) Strand = Plus / Minus Query: 332 tggatatggcaccgtcttgtagctggattgaatgctcagttgcgtttggttcgacgtgga 391 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 93285 tggatatggcaccgtcttgtagctggattgaatgcacagctgcgtttggttcgctgtgga 93226 Query: 392 aatctcaaagcaacatttcttcctgtccttgactggcttgaaactcacgcggatcctgct 451 ||||| |||| ||| | |||||| ||| | |||||||||||||||||||| ||||| || Sbjct: 93225 aatctgaaagtaacgtgtcttccagtcatcaactggcttgaaactcacgcgaatccttct 93166 Query: 452 ttgggtgcgaatggtgtccgtgtcgatcttgcgtggttccaagctacagcgttagggtat 511 || | || ||||||| |||| || |||||||| ||||| ||||||||||| ||||||| Sbjct: 93165 ttagctgagaatggtatccgcgttgatcttgcctggtttcaagctacagcactagggtac 93106 Query: 512 tgccaacttggtcttgttgttta 534 |||||| |||||||| ||||||| Sbjct: 93105 tgccaatttggtcttcttgttta 93083 Score = 176 bits (89), Expect = 6e-41 Identities = 170/197 (86%) Strand = Plus / Minus Query: 124 tctcaaggtgactgcaaccccagatctaatgttgggatatttagatttcttccttggtgg 183 |||| |||||||||||||||||||| ||||| | || |||||||||||||||||||| || Sbjct: 93573 tctctaggtgactgcaaccccagatttaatgctagggtatttagatttcttccttggggg 93514 Query: 184 agatgagaaaagacctgatcttcctcctagacttcgtcagaggtttccgatgtcgttgat 243 |||||| || || ||||||||||| ||| | |||||||| |||||||| ||||| | || Sbjct: 93513 agatgaaaagaggcctgatcttccacctcgtcttcgtcaaaggtttccaatgtctcttat 93454 Query: 244 ttttggtggtgatggaagttacatggctccattttcacttcatagtgacagtgtgctgac 303 ||||| || ||||||||||||||| |||| |||| |||| ||||||| |||||||| || Sbjct: 93453 ctttggaggcgatggaagttacatgactccgtttttacttaatagtgatagtgtgcttac 93394 Query: 304 cagtcttatgagccagg 320 |||||||||||||||| Sbjct: 93393 tagtcttatgagccagg 93377 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 47 agacttcgtgaatttgttcgctctgagtatgatcattcatgcttaaggtcttgccgttca 106 |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 94110 agacttcgtgaatttgttcgctctgaatatgatcattcatgcttacggtcttgccgttca 94051 Query: 107 cgtgcgctttatgaaggtctcaaggt 132 ||||| || |||||||| |||||||| Sbjct: 94050 cgtgcactctatgaaggcctcaaggt 94025
>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10, complete sequence Length = 155106 Score = 139 bits (70), Expect = 1e-29 Identities = 145/170 (85%) Strand = Plus / Plus Query: 143 ccagatctaatgttgggatatttagatttcttccttggtggagatgagaaaagacctgat 202 |||||| ||||| |||| |||||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 104309 ccagatttaatgctgggttatttagatttctttcttggtggggatgaaaaaaggcctgac 104368 Query: 203 cttcctcctagacttcgtcagaggtttccgatgtcgttgatttttggtggtgatggaagt 262 || || ||| | |||| ||| ||||| || ||||| || || ||||| || ||||||||| Sbjct: 104369 ctcccccctcgtcttcatcaaaggttgccaatgtcattaatctttggaggcgatggaagt 104428 Query: 263 tacatggctccattttcacttcatagtgacagtgtgctgaccagtcttat 312 ||||||||||||||||||||||| |||||||||||| | || |||||||| Sbjct: 104429 tacatggctccattttcacttcacagtgacagtgtggtcacaagtcttat 104478 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Plus Query: 335 atatggcaccgtcttgtagctggattgaatgctcagttgcgtttggttcgacgtggaaat 394 ||||||||||| ||||| ||||||||||| || ||||||||||||| ||| ||||||||| Sbjct: 104587 atatggcaccgccttgttgctggattgaacgcccagttgcgtttggctcgtcgtggaaat 104646 Query: 395 ctcaaagcaacatttcttcctgtccttgactggcttgaaactcacgcggatcctgctttg 454 || ||||| |||||||||||||| || | |||||||||||||| || ||||||||||| Sbjct: 104647 ctaaaagccacatttcttcctgtactcaaatggcttgaaactcatgcaaatcctgctttg 104706 Score = 107 bits (54), Expect = 4e-20 Identities = 101/119 (84%) Strand = Plus / Plus Query: 14 tggcaacagtggcgtagaagnnnnnnnttgcaaagacttcgtgaatttgttcgctctgag 73 |||||||||||||| ||||| || |||||| | |||||||||||||| ||||| Sbjct: 103598 tggcaacagtggcgcagaagaagaaaattacaaagattacgtgaatttgttcgatctgaa 103657 Query: 74 tatgatcattcatgcttaaggtcttgccgttcacgtgcgctttatgaaggtctcaaggt 132 |||||||||||||| ||| ||||||||||||||||||| ||||||||||| || ||||| Sbjct: 103658 tatgatcattcatgtttacggtcttgccgttcacgtgctctttatgaagggctgaaggt 103716
>gb|AC093920.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1725_E07, complete sequence Length = 87244 Score = 139 bits (70), Expect = 1e-29 Identities = 145/170 (85%) Strand = Plus / Plus Query: 143 ccagatctaatgttgggatatttagatttcttccttggtggagatgagaaaagacctgat 202 |||||| ||||| |||| |||||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 6463 ccagatttaatgctgggttatttagatttctttcttggtggggatgaaaaaaggcctgac 6522 Query: 203 cttcctcctagacttcgtcagaggtttccgatgtcgttgatttttggtggtgatggaagt 262 || || ||| | |||| ||| ||||| || ||||| || || ||||| || ||||||||| Sbjct: 6523 ctcccccctcgtcttcatcaaaggttgccaatgtcattaatctttggaggcgatggaagt 6582 Query: 263 tacatggctccattttcacttcatagtgacagtgtgctgaccagtcttat 312 ||||||||||||||||||||||| |||||||||||| | || |||||||| Sbjct: 6583 tacatggctccattttcacttcacagtgacagtgtggtcacaagtcttat 6632 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Plus Query: 335 atatggcaccgtcttgtagctggattgaatgctcagttgcgtttggttcgacgtggaaat 394 ||||||||||| ||||| ||||||||||| || ||||||||||||| ||| ||||||||| Sbjct: 6741 atatggcaccgccttgttgctggattgaacgcccagttgcgtttggctcgtcgtggaaat 6800 Query: 395 ctcaaagcaacatttcttcctgtccttgactggcttgaaactcacgcggatcctgctttg 454 || ||||| |||||||||||||| || | |||||||||||||| || ||||||||||| Sbjct: 6801 ctaaaagccacatttcttcctgtactcaaatggcttgaaactcatgcaaatcctgctttg 6860 Score = 107 bits (54), Expect = 4e-20 Identities = 101/119 (84%) Strand = Plus / Plus Query: 14 tggcaacagtggcgtagaagnnnnnnnttgcaaagacttcgtgaatttgttcgctctgag 73 |||||||||||||| ||||| || |||||| | |||||||||||||| ||||| Sbjct: 5752 tggcaacagtggcgcagaagaagaaaattacaaagattacgtgaatttgttcgatctgaa 5811 Query: 74 tatgatcattcatgcttaaggtcttgccgttcacgtgcgctttatgaaggtctcaaggt 132 |||||||||||||| ||| ||||||||||||||||||| ||||||||||| || ||||| Sbjct: 5812 tatgatcattcatgtttacggtcttgccgttcacgtgctctttatgaagggctgaaggt 5870
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 139 bits (70), Expect = 1e-29 Identities = 145/170 (85%) Strand = Plus / Plus Query: 143 ccagatctaatgttgggatatttagatttcttccttggtggagatgagaaaagacctgat 202 |||||| ||||| |||| |||||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 5189806 ccagatttaatgctgggttatttagatttctttcttggtggggatgaaaaaaggcctgac 5189865 Query: 203 cttcctcctagacttcgtcagaggtttccgatgtcgttgatttttggtggtgatggaagt 262 || || ||| | |||| ||| ||||| || ||||| || || ||||| || ||||||||| Sbjct: 5189866 ctcccccctcgtcttcatcaaaggttgccaatgtcattaatctttggaggcgatggaagt 5189925 Query: 263 tacatggctccattttcacttcatagtgacagtgtgctgaccagtcttat 312 ||||||||||||||||||||||| |||||||||||| | || |||||||| Sbjct: 5189926 tacatggctccattttcacttcacagtgacagtgtggtcacaagtcttat 5189975 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Plus Query: 335 atatggcaccgtcttgtagctggattgaatgctcagttgcgtttggttcgacgtggaaat 394 ||||||||||| ||||| ||||||||||| || ||||||||||||| ||| ||||||||| Sbjct: 5190084 atatggcaccgccttgttgctggattgaacgcccagttgcgtttggctcgtcgtggaaat 5190143 Query: 395 ctcaaagcaacatttcttcctgtccttgactggcttgaaactcacgcggatcctgctttg 454 || ||||| |||||||||||||| || | |||||||||||||| || ||||||||||| Sbjct: 5190144 ctaaaagccacatttcttcctgtactcaaatggcttgaaactcatgcaaatcctgctttg 5190203 Score = 107 bits (54), Expect = 4e-20 Identities = 101/119 (84%) Strand = Plus / Plus Query: 14 tggcaacagtggcgtagaagnnnnnnnttgcaaagacttcgtgaatttgttcgctctgag 73 |||||||||||||| ||||| || |||||| | |||||||||||||| ||||| Sbjct: 5189095 tggcaacagtggcgcagaagaagaaaattacaaagattacgtgaatttgttcgatctgaa 5189154 Query: 74 tatgatcattcatgcttaaggtcttgccgttcacgtgcgctttatgaaggtctcaaggt 132 |||||||||||||| ||| ||||||||||||||||||| ||||||||||| || ||||| Sbjct: 5189155 tatgatcattcatgtttacggtcttgccgttcacgtgctctttatgaagggctgaaggt 5189213
>gb|AC144766.18| Medicago truncatula clone mth2-17c2, complete sequence Length = 92099 Score = 81.8 bits (41), Expect = 3e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 170 ttcttccttggtggagatgagaaaagacctgatcttcctcctagacttcgtcagaggttt 229 ||||| ||||||||||||||||||||| ||||||| |||||| | |||| ||| || ||| Sbjct: 75063 ttctttcttggtggagatgagaaaagatctgatctgcctcctcgtcttcatcaaagattt 75122 Query: 230 ccgatgtcgttgatttttggtggtgatggaagttaca 266 || ||||| | |||||||| || ||||||||||||| Sbjct: 75123 cccatgtcaataatttttgggggagatggaagttaca 75159 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 49 acttcgtgaatttgttcgctctgagtatgatcattcatgcttaaggtcttgccgttcacg 108 |||||| ||||||||||| || |||||||||||| | ||||| | |||||||||||||| Sbjct: 74639 acttcgagaatttgttcgatcagagtatgatcatgcttgcttgcgctcttgccgttcacg 74698 Query: 109 tgcgctttatgaagg 123 || ||||||||||| Sbjct: 74699 ggccctttatgaagg 74713
>ref|NM_121208.2| Arabidopsis thaliana unknown protein AT5G11700 mRNA, complete cds Length = 4731 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Plus Query: 167 gatttcttccttggtggagatgagaaaagacctgatcttcctcctagacttcgtcagagg 226 ||||||||||||||||| ||||| ||||| | || ||||| ||| |||||| || ||| Sbjct: 3202 gatttcttccttggtggggatgaaaaaaggacagaccttccacctcgacttcaccaaagg 3261 Query: 227 tttccgatgtcgttgatttttggtggtgatggaagttacatggctccattttcacttca 285 ||||| ||| | | | |||||||||||||| |||||||||||||| || |||||||| Sbjct: 3262 tttccaatgcccatattgtttggtggtgatggcagttacatggctcctttctcacttca 3320
>emb|AL163814.1|ATT22P22 Arabidopsis thaliana DNA chromosome 5, BAC clone T22P22 (ESSA project) Length = 93205 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 167 gatttcttccttggtggagatgagaaaagacctgatcttcctcctagacttcgtcagagg 226 ||||||||||||||||| ||||| ||||| | || ||||| ||| |||||| || ||| Sbjct: 43825 gatttcttccttggtggggatgaaaaaaggacagaccttccacctcgacttcaccaaagg 43766 Query: 227 tttccgatgtcgttgatttttggtggtgatggaagttacatggctccattttcacttca 285 ||||| ||| | | | |||||||||||||| |||||||||||||| || |||||||| Sbjct: 43765 tttccaatgcccatattgtttggtggtgatggcagttacatggctcctttctcacttca 43707
>emb|CT010443.3| M.truncatula DNA sequence from clone MTH2-76G21 on chromosome 3, complete sequence Length = 111543 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 243 tttttggtggtgatggaagttacatggctccattt 277 |||||||||||||||||||||| |||||||||||| Sbjct: 108591 tttttggtggtgatggaagttatatggctccattt 108557 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 53 cgtgaatttgttcgctctgagtatgatcattcatgcttaaggtcttgccgttcacgtgcg 112 ||||| |||||||| || |||||||||||| | ||| | | |||||||| ||||| || Sbjct: 110111 cgtgagtttgttcgatcagagtatgatcatgcctgccttcgttcttgccgatcacgagct 110052 Query: 113 ctttatgaagg 123 ||||||||||| Sbjct: 110051 ctttatgaagg 110041
>gb|AC146940.19| Medicago truncatula clone mth2-132l6, complete sequence Length = 125567 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 243 tttttggtggtgatggaagttacatggctccattt 277 |||||||||||||||||||||| |||||||||||| Sbjct: 44290 tttttggtggtgatggaagttatatggctccattt 44324 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 53 cgtgaatttgttcgctctgagtatgatcattcatgcttaaggtcttgccgttcacgtgcg 112 ||||| |||||||| || |||||||||||| | ||| | | |||||||| ||||| || Sbjct: 42770 cgtgagtttgttcgatcagagtatgatcatgcctgccttcgttcttgccgatcacgagct 42829 Query: 113 ctttatgaagg 123 ||||||||||| Sbjct: 42830 ctttatgaagg 42840
>gb|AC138017.15| Medicago truncatula clone mth2-6i3, complete sequence Length = 129585 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 243 tttttggtggtgatggaagttacatggctccattt 277 |||||||||||||||||||||| |||||||||||| Sbjct: 81227 tttttggtggtgatggaagttatatggctccattt 81193 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 53 cgtgaatttgttcgctctgagtatgatcattcatgcttaaggtcttgccgttcacgtgcg 112 ||||| |||||||| || |||||||||||| | ||| | | |||||||| ||||| || Sbjct: 82747 cgtgagtttgttcgatcagagtatgatcatgcctgccttcgttcttgccgatcacgagct 82688 Query: 113 ctttatgaagg 123 ||||||||||| Sbjct: 82687 ctttatgaagg 82677
>ref|XM_474684.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4239 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 222 agaggtttccgatgtcgttgatttttggtggtgatggaagttacatggctccat 275 |||||||||| |||| || |||||||||||||||||||| || ||| |||||| Sbjct: 3251 agaggtttcccatgtgcttaatttttggtggtgatggaagctatatgtctccat 3304
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 222 agaggtttccgatgtcgttgatttttggtggtgatggaagttacatggctccat 275 |||||||||| |||| || |||||||||||||||||||| || ||| |||||| Sbjct: 5590949 agaggtttcccatgtgcttaatttttggtggtgatggaagctatatgtctccat 5591002
>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01, complete sequence Length = 162227 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 222 agaggtttccgatgtcgttgatttttggtggtgatggaagttacatggctccat 275 |||||||||| |||| || |||||||||||||||||||| || ||| |||||| Sbjct: 48156 agaggtttcccatgtgcttaatttttggtggtgatggaagctatatgtctccat 48209
>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01, complete sequence Length = 150283 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 222 agaggtttccgatgtcgttgatttttggtggtgatggaagttacatggctccat 275 |||||||||| |||| || |||||||||||||||||||| || ||| |||||| Sbjct: 145579 agaggtttcccatgtgcttaatttttggtggtgatggaagctatatgtctccat 145632
>ref|NM_119446.1| Arabidopsis thaliana unknown protein AT4G32920 mRNA, complete cds Length = 4877 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 165 tagatttcttccttggtggagatgagaaaagacctgatcttcctcct 211 ||||||||||||||||||| ||||| || ||| |||||||||||| Sbjct: 3191 tagatttcttccttggtggcgatgaaaagagaagcgatcttcctcct 3237
>emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 78 Length = 198669 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 165 tagatttcttccttggtggagatgagaaaagacctgatcttcctcct 211 ||||||||||||||||||| ||||| || ||| |||||||||||| Sbjct: 111501 tagatttcttccttggtggcgatgaaaagagaagcgatcttcctcct 111455
>emb|AL031804.1|ATF26P21 Arabidopsis thaliana DNA chromosome 4, BAC clone F26P21 (ESSA project) Length = 94482 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 165 tagatttcttccttggtggagatgagaaaagacctgatcttcctcct 211 ||||||||||||||||||| ||||| || ||| |||||||||||| Sbjct: 20805 tagatttcttccttggtggcgatgaaaagagaagcgatcttcctcct 20759
>gb|AC129477.11| Mus musculus chromosome 13, clone RP23-98D15, complete sequence Length = 251066 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 agcccaagaattaaaacagaa 595 ||||||||||||||||||||| Sbjct: 205168 agcccaagaattaaaacagaa 205188
>ref|NM_178712.2| Mus musculus G protein-coupled receptor 64 (Gpr64), mRNA Length = 4684 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 acctgatcttcctcctagact 216 ||||||||||||||||||||| Sbjct: 2074 acctgatcttcctcctagact 2094
>gb|AC127699.4| Mus musculus BAC clone RP24-114P21 from chromosome 7, complete sequence Length = 152811 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 418 ccttgactggcttgaaactca 438 ||||||||||||||||||||| Sbjct: 50879 ccttgactggcttgaaactca 50899
>gb|AF538957.1| Mus musculus Me6 receptor splice variant d3 (Me6) mRNA, complete cds; alternatively spliced Length = 4603 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 acctgatcttcctcctagact 216 ||||||||||||||||||||| Sbjct: 1993 acctgatcttcctcctagact 2013
>gb|AF538956.1| Mus musculus Me6 receptor splice variant d2 (Me6) mRNA, complete cds; alternatively spliced Length = 4675 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 acctgatcttcctcctagact 216 ||||||||||||||||||||| Sbjct: 2065 acctgatcttcctcctagact 2085
>gb|AF538955.1| Mus musculus Me6 receptor splice variant d1 (Me6) mRNA, complete cds; alternatively spliced Length = 4636 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 acctgatcttcctcctagact 216 ||||||||||||||||||||| Sbjct: 2026 acctgatcttcctcctagact 2046
>gb|AF538952.1| Mus musculus Me6 receptor long splice variant mRNA, complete cds; alternatively spliced Length = 4684 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 acctgatcttcctcctagact 216 ||||||||||||||||||||| Sbjct: 2074 acctgatcttcctcctagact 2094
>dbj|AK046871.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830041D06 product:similar to G-PROTEIN-COUPLED RECEPTOR HE6 PRECURSOR homolog [Homo sapiens], full insert sequence Length = 3388 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 acctgatcttcctcctagact 216 ||||||||||||||||||||| Sbjct: 2034 acctgatcttcctcctagact 2054
>gb|AC022511.22|AC022511 Homo sapiens 12 BAC RP11-71J4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 133350 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 caggctgtgcaaccttggata 337 ||||||||||||||||||||| Sbjct: 125058 caggctgtgcaaccttggata 125038
>dbj|AK041291.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530097H16 product:similar to G-PROTEIN-COUPLED RECEPTOR HE6 PRECURSOR [Homo sapiens], full insert sequence Length = 3421 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 acctgatcttcctcctagact 216 ||||||||||||||||||||| Sbjct: 2298 acctgatcttcctcctagact 2318
>emb|CT009759.12| Mouse DNA sequence from clone RP23-213P21 on chromosome 13, complete sequence Length = 199967 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 agcccaagaattaaaacagaa 595 ||||||||||||||||||||| Sbjct: 133141 agcccaagaattaaaacagaa 133161
>emb|AL731801.11| Mouse DNA sequence from clone RP23-181L15 on chromosome X, complete sequence Length = 197346 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 acctgatcttcctcctagact 216 ||||||||||||||||||||| Sbjct: 126634 acctgatcttcctcctagact 126654
>gb|AC161192.12| Mus musculus chromosome 5, clone RP23-382I10, complete sequence Length = 214985 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 ttgactggcttgaaactcac 439 |||||||||||||||||||| Sbjct: 151844 ttgactggcttgaaactcac 151825
>gb|AC158957.2| Mus musculus chromosome 15, clone RP23-27P5, complete sequence Length = 187390 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 gatatttagatttcttcctt 178 |||||||||||||||||||| Sbjct: 28142 gatatttagatttcttcctt 28161
>gb|AC138641.10| Mus musculus chromosome 5, clone RP23-466K15, complete sequence Length = 175628 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 ttgactggcttgaaactcac 439 |||||||||||||||||||| Sbjct: 152244 ttgactggcttgaaactcac 152263
>gb|AC166486.5| Mus musculus chromosome 1, clone RP23-187M9, complete sequence Length = 187098 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 tgtccttgactggcttgaaa 434 |||||||||||||||||||| Sbjct: 25939 tgtccttgactggcttgaaa 25958
>gb|AY386697.1| Oryctolagus cuniculus clone 225P18, complete sequence Length = 139446 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgacagtgtgctgaccag 306 |||||||||||||||||||| Sbjct: 9219 agtgacagtgtgctgaccag 9238 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgacagtgtgctgaccag 306 |||||||||||||||||||| Sbjct: 4296 agtgacagtgtgctgaccag 4315
>gb|AC092140.4| Homo sapiens chromosome 16 clone RP11-413H22, complete sequence Length = 193188 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 gaaccagttactgctgaact 567 |||||||||||||||||||| Sbjct: 168914 gaaccagttactgctgaact 168933
>gb|AC110090.6| Mus musculus BAC clone RP23-27L4 from chromosome 1, complete sequence Length = 218518 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gatatttagatttcttcctt 178 |||||||||||||||||||| Sbjct: 120672 gatatttagatttcttcctt 120653
>gb|AC121591.4| Mus musculus BAC clone RP23-289H3 from 1, complete sequence Length = 195393 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tgtccttgactggcttgaaa 434 |||||||||||||||||||| Sbjct: 154 tgtccttgactggcttgaaa 135
>emb|Z86062.1|HS121G13 Human DNA sequence from clone RP1-121G13 on chromosome 6q16 Contains the 3' end of the RNAH gene for an RNA helicase, the 5' end of the SIM1 gene for single-minded homolog 1 (Drosophila), an RP42 homolog pseudogene a novel gene and three CpG islands, complete sequence Length = 176932 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 aacatttcttcctgtccttg 422 |||||||||||||||||||| Sbjct: 157695 aacatttcttcctgtccttg 157676
>emb|AL590031.6| Human DNA sequence from clone RP11-285F11 on chromosome X Contains the 5' end of the gene for a novel WD repeat domain protein, complete sequence Length = 145153 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tcaaggtgactgcaacccca 145 |||||||||||||||||||| Sbjct: 135738 tcaaggtgactgcaacccca 135757
>emb|CR354594.13| Zebrafish DNA sequence from clone DKEY-173F1 in linkage group 13, complete sequence Length = 196408 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 ggatatttagatttcttcct 177 |||||||||||||||||||| Sbjct: 106880 ggatatttagatttcttcct 106899
>gb|AF279873.4| Homo sapiens chromosome 8 clone RP1-25D10, RP1-273G13, RP1-103E7 map 8p21-p11, complete sequence Length = 301232 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 189 agaaaagacctgatcttcctcctagact 216 |||||||| || |||||||||||||||| Sbjct: 79821 agaaaagatctaatcttcctcctagact 79794
>gb|AC010010.6| Drosophila melanogaster 3L BAC RP98-13F6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167977 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 cactgtcgagggcgaaccag 554 |||||||||||||||||||| Sbjct: 76284 cactgtcgagggcgaaccag 76303
>ref|NM_167826.1| Drosophila melanogaster four wheel drive CG7004-RB, transcript variant B (fwd), mRNA Length = 5601 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 cactgtcgagggcgaaccag 554 |||||||||||||||||||| Sbjct: 652 cactgtcgagggcgaaccag 633
>ref|NM_080083.3| Drosophila melanogaster four wheel drive CG7004-RA, transcript variant A (fwd), mRNA Length = 6357 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 cactgtcgagggcgaaccag 554 |||||||||||||||||||| Sbjct: 1408 cactgtcgagggcgaaccag 1389
>gb|AC099051.2| Homo sapiens chromosome 3 clone RP11-416A9, complete sequence Length = 174372 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 agtcttatgagccaggctgt 324 |||||||||||||||||||| Sbjct: 26357 agtcttatgagccaggctgt 26376
>gb|AY052049.1| Drosophila melanogaster LP07057 full length cDNA Length = 6341 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 cactgtcgagggcgaaccag 554 |||||||||||||||||||| Sbjct: 1393 cactgtcgagggcgaaccag 1374
>gb|AC139044.6| Mus musculus chromosome 15, clone RP23-249A8, complete sequence Length = 148569 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 gatatttagatttcttcctt 178 |||||||||||||||||||| Sbjct: 117080 gatatttagatttcttcctt 117099
>gb|AC123023.4| Homo sapiens 3 BAC RP11-727M21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183779 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 agtcttatgagccaggctgt 324 |||||||||||||||||||| Sbjct: 174537 agtcttatgagccaggctgt 174556
>gb|AC009155.3|AC009155 Homo sapiens chromosome 16 clone RP11-5A3, complete sequence Length = 143860 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 gaaccagttactgctgaact 567 |||||||||||||||||||| Sbjct: 12759 gaaccagttactgctgaact 12778
>emb|BX005213.15| Mouse DNA sequence from clone RP23-412I2 on chromosome X, complete sequence Length = 96535 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 cttggatatggcaccgtctt 349 |||||||||||||||||||| Sbjct: 68892 cttggatatggcaccgtctt 68873
>emb|CR954191.2| Medicago truncatula chromosome 5 clone mte1-26e13, COMPLETE SEQUENCE Length = 96667 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gttgatttttggtggtgatg 257 |||||||||||||||||||| Sbjct: 87055 gttgatttttggtggtgatg 87074
>gb|AE003467.4| Drosophila melanogaster chromosome 3L, section 1 of 83 of the complete sequence Length = 303512 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 cactgtcgagggcgaaccag 554 |||||||||||||||||||| Sbjct: 297332 cactgtcgagggcgaaccag 297351
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 agatgagaaaagacctgatc 203 |||||||||||||||||||| Sbjct: 1289226 agatgagaaaagacctgatc 1289207
>gb|U00089.2| Mycoplasma pneumoniae M129, complete genome Length = 816394 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 ttggtggtgatggaagttacatgg 269 ||||||||||||| |||||||||| Sbjct: 355998 ttggtggtgatggtagttacatgg 356021
>gb|M60120.1|RABIGHVAA Rabbit (a2a2 haplotype) Ig H-chain V-region (allotype VHa1) gene, clone RVH700 Length = 464 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgacagtgtgctgaccag 306 |||||||||||||||||||| Sbjct: 77 agtgacagtgtgctgaccag 96
>gb|L27314.1|RABIDNAD Oryctolagus cuniculus immunoglobulin V region gene Length = 564 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgacagtgtgctgaccag 306 |||||||||||||||||||| Sbjct: 191 agtgacagtgtgctgaccag 210
>gb|L27313.1|RABIDNAC Oryctolagus cuniculus immunoglobulin V region gene Length = 583 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgacagtgtgctgaccag 306 |||||||||||||||||||| Sbjct: 193 agtgacagtgtgctgaccag 212
>gb|M93186.1|RABIGHVXP Oryctolagus cuniculus Ig germline H-chain pseudo gene, V-region (VH7-a3) Length = 569 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgacagtgtgctgaccag 306 |||||||||||||||||||| Sbjct: 181 agtgacagtgtgctgaccag 200
>gb|M93185.1|RABIGHVXO Oryctolagus cuniculus Ig germline H-chain gene, V-region (VH6-a3), 5' end Length = 583 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgacagtgtgctgaccag 306 |||||||||||||||||||| Sbjct: 193 agtgacagtgtgctgaccag 212
>gb|M93184.1|RABIGHVXN Oryctolagus cuniculus Ig germline H-chain pseudo gene, V-region (VH5-a3) Length = 584 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgacagtgtgctgaccag 306 |||||||||||||||||||| Sbjct: 193 agtgacagtgtgctgaccag 212
>gb|M77086.1|RABIGHVDBT O.cunniculus germline IgH heavy chain V-H pseudogene, allotype VHa2 Length = 716 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agtgacagtgtgctgaccag 306 |||||||||||||||||||| Sbjct: 203 agtgacagtgtgctgaccag 222 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,194,641 Number of Sequences: 3902068 Number of extensions: 5194641 Number of successful extensions: 98636 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98381 Number of HSP's gapped (non-prelim): 245 length of query: 636 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 613 effective length of database: 17,143,297,704 effective search space: 10508841492552 effective search space used: 10508841492552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)