| Clone Name | baal26i22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469817.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 654 bits (330), Expect = 0.0 Identities = 540/610 (88%) Strand = Plus / Plus Query: 5 cgccgcagcttccgccgcctcagctacggccgctcccacgtcgtcgtcgtcgcctactac 64 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 cgccggagcttccgccgcctcagctacggccgctcccacgtcgtcgtcgtcgcctactac 264 Query: 65 gcgctcctctgggccgtcgccctcctcaacctcctctggtgcttcctccaggtgtggcag 124 ||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||| Sbjct: 265 gcgctcctctgggccgtcgccgtcctcaacctcctctggtgcttcctgcaggcgtggcaa 324 Query: 125 tgtatgcctgatagggcattctcatggaatgtgctttcattgtttaccaaatcgggaatg 184 ||||||||||||||||| ||||||||||||||||| || ||||||||||||| || ||| Sbjct: 325 tgtatgcctgatagggcgttctcatggaatgtgctgtctctgtttaccaaatcagggatg 384 Query: 185 ttattcttggaagttagtcttatagcatttctgcttcaaggaaatgaagccagtggttat 244 |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| | Sbjct: 385 ttattcttggaagttagtctcatagcatttctgcttcaaggaaacgaaaccagtggtttt 444 Query: 245 gagtctttgggacgtacctttgtcatctctggtgctgtagttagtgctgatgtattgctc 304 || ||||||| |||||| ||||| |||||||| ||||||||| |||||||||||||||| Sbjct: 445 gaatctttggcacgtacgtttgttatctctggagctgtagttgctgctgatgtattgctc 504 Query: 305 aagaccatatatgtattcggctttggtgttcctttgtttatcgatgctgaccaaggaact 364 ||||| |||||||| || || |||||||| ||||||| || |||| ||||||||||||| Sbjct: 505 aagactatatatgtttttgggtttggtgtctctttgttcattgatgttgaccaaggaact 564 Query: 365 ggtgggaaatggggcctatggattctccacaaattggtgcttacaggagtctatggtttg 424 |||||||| |||||||||||| |||| ||||||||||||||||| || |||||||| || Sbjct: 565 ggtgggaagtggggcctatggtttctacacaaattggtgcttactggtgtctatggcctg 624 Query: 425 attgttttcatgcatcactcaaggtggaaagacaggctacctgcaaaaccggcatattac 484 ||||| |||||| ||||||||||||||| ||||||| ||||||||||||| |||||||| Sbjct: 625 attgtgttcatgtatcactcaaggtggagagacaggttacctgcaaaaccagcatattat 684 Query: 485 cagtatgtgtgtgcaatgctggcacttaacggcctatcgctgtttggctgtttcctcgtt 544 | ||||| ||||| ||| | ||| || ||| |||| |||||||| |||||||| ||| Sbjct: 685 aactatgtctgtgcgatgttactactgaatggcatatcactgtttggatgtttccttgtt 744 Query: 545 acatgtggagctggatttggtctatggctttacaacctcactactgtctgttaccatgct 604 || |||||||||||||||| ||||| | ||||| ||||| | ||| ||||| ||| || Sbjct: 745 gcaactggagctggatttggtttatggttgtacaatctcaccagtgtatgttatcattct 804 Query: 605 ctttaccttc 614 |||||||||| Sbjct: 805 ctttaccttc 814
>dbj|AK099399.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O17, full insert sequence Length = 1344 Score = 654 bits (330), Expect = 0.0 Identities = 540/610 (88%) Strand = Plus / Plus Query: 5 cgccgcagcttccgccgcctcagctacggccgctcccacgtcgtcgtcgtcgcctactac 64 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 cgccggagcttccgccgcctcagctacggccgctcccacgtcgtcgtcgtcgcctactac 397 Query: 65 gcgctcctctgggccgtcgccctcctcaacctcctctggtgcttcctccaggtgtggcag 124 ||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||| Sbjct: 398 gcgctcctctgggccgtcgccgtcctcaacctcctctggtgcttcctgcaggcgtggcaa 457 Query: 125 tgtatgcctgatagggcattctcatggaatgtgctttcattgtttaccaaatcgggaatg 184 ||||||||||||||||| ||||||||||||||||| || ||||||||||||| || ||| Sbjct: 458 tgtatgcctgatagggcgttctcatggaatgtgctgtctctgtttaccaaatcagggatg 517 Query: 185 ttattcttggaagttagtcttatagcatttctgcttcaaggaaatgaagccagtggttat 244 |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| | Sbjct: 518 ttattcttggaagttagtctcatagcatttctgcttcaaggaaacgaaaccagtggtttt 577 Query: 245 gagtctttgggacgtacctttgtcatctctggtgctgtagttagtgctgatgtattgctc 304 || ||||||| |||||| ||||| |||||||| ||||||||| |||||||||||||||| Sbjct: 578 gaatctttggcacgtacgtttgttatctctggagctgtagttgctgctgatgtattgctc 637 Query: 305 aagaccatatatgtattcggctttggtgttcctttgtttatcgatgctgaccaaggaact 364 ||||| |||||||| || || |||||||| ||||||| || |||| ||||||||||||| Sbjct: 638 aagactatatatgtttttgggtttggtgtctctttgttcattgatgttgaccaaggaact 697 Query: 365 ggtgggaaatggggcctatggattctccacaaattggtgcttacaggagtctatggtttg 424 |||||||| |||||||||||| |||| ||||||||||||||||| || |||||||| || Sbjct: 698 ggtgggaagtggggcctatggtttctacacaaattggtgcttactggtgtctatggcctg 757 Query: 425 attgttttcatgcatcactcaaggtggaaagacaggctacctgcaaaaccggcatattac 484 ||||| |||||| ||||||||||||||| ||||||| ||||||||||||| |||||||| Sbjct: 758 attgtgttcatgtatcactcaaggtggagagacaggttacctgcaaaaccagcatattat 817 Query: 485 cagtatgtgtgtgcaatgctggcacttaacggcctatcgctgtttggctgtttcctcgtt 544 | ||||| ||||| ||| | ||| || ||| |||| |||||||| |||||||| ||| Sbjct: 818 aactatgtctgtgcgatgttactactgaatggcatatcactgtttggatgtttccttgtt 877 Query: 545 acatgtggagctggatttggtctatggctttacaacctcactactgtctgttaccatgct 604 || |||||||||||||||| ||||| | ||||| ||||| | ||| ||||| ||| || Sbjct: 878 gcaactggagctggatttggtttatggttgtacaatctcaccagtgtatgttatcattct 937 Query: 605 ctttaccttc 614 |||||||||| Sbjct: 938 ctttaccttc 947
>ref|XM_469818.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1948 Score = 426 bits (215), Expect = e-116 Identities = 281/303 (92%) Strand = Plus / Plus Query: 5 cgccgcagcttccgccgcctcagctacggccgctcccacgtcgtcgtcgtcgcctactac 64 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 cgccggagcttccgccgcctcagctacggccgctcccacgtcgtcgtcgtcgcctactac 264 Query: 65 gcgctcctctgggccgtcgccctcctcaacctcctctggtgcttcctccaggtgtggcag 124 ||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||| Sbjct: 265 gcgctcctctgggccgtcgccgtcctcaacctcctctggtgcttcctgcaggcgtggcaa 324 Query: 125 tgtatgcctgatagggcattctcatggaatgtgctttcattgtttaccaaatcgggaatg 184 ||||||||||||||||| ||||||||||||||||| || ||||||||||||| || ||| Sbjct: 325 tgtatgcctgatagggcgttctcatggaatgtgctgtctctgtttaccaaatcagggatg 384 Query: 185 ttattcttggaagttagtcttatagcatttctgcttcaaggaaatgaagccagtggttat 244 |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| | Sbjct: 385 ttattcttggaagttagtctcatagcatttctgcttcaaggaaacgaaaccagtggtttt 444 Query: 245 gagtctttgggacgtacctttgtcatctctggtgctgtagttagtgctgatgtattgctc 304 || ||||||| |||||| ||||| |||||||| ||||||||| |||||||||||||||| Sbjct: 445 gaatctttggcacgtacgtttgttatctctggagctgtagttgctgctgatgtattgctc 504 Query: 305 aag 307 ||| Sbjct: 505 aag 507 Score = 163 bits (82), Expect = 8e-37 Identities = 142/162 (87%) Strand = Plus / Plus Query: 306 agaccatatatgtattcggctttggtgttcctttgtttatcgatgctgaccaaggaactg 365 |||| |||||||| || || |||||||| ||||||| || |||| |||||||||||||| Sbjct: 1206 agactatatatgtttttgggtttggtgtctctttgttcattgatgttgaccaaggaactg 1265 Query: 366 gtgggaaatggggcctatggattctccacaaattggtgcttacaggagtctatggtttga 425 ||||||| |||||||||||| |||| ||||||||||||||||| || |||||||| ||| Sbjct: 1266 gtgggaagtggggcctatggtttctacacaaattggtgcttactggtgtctatggcctga 1325 Query: 426 ttgttttcatgcatcactcaaggtggaaagacaggctacctg 467 |||| |||||| ||||||||||||||| ||||||| |||||| Sbjct: 1326 ttgtgttcatgtatcactcaaggtggagagacaggttacctg 1367 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 519 tatcgctgtttggctgtttcctcgttacatgtggagctggatttggtctatgg 571 |||| |||||||| |||||||| ||| || |||||||||||||||| ||||| Sbjct: 1509 tatcactgtttggatgtttccttgttgcaactggagctggatttggtttatgg 1561
>gb|AY104090.1| Zea mays PCO128580 mRNA sequence Length = 703 Score = 272 bits (137), Expect = 1e-69 Identities = 315/376 (83%) Strand = Plus / Plus Query: 239 ggttatgagtctttgggacgtacctttgtcatctctggtgctgtagttagtgctgatgta 298 |||| ||| ||||||| ||| |||||||| || ||||| | ||||||| || ||||||| Sbjct: 2 ggttttgaatctttggcacgaacctttgttatatctggagntgtagttgntgntgatgta 61 Query: 299 ttgctcaagaccatatatgtattcggctttggtgttcctttgtttatcgatgctgaccaa 358 ||||||||||| |||||||| || || || |||||||||||||| || ||| |||| ||| Sbjct: 62 ttgctcaagactatatatgtttttggnttnggtgttcctttgttcattgatactgatcaa 121 Query: 359 ggaactggtgggaaatggggcctatggattctccacaaattggtgcttacaggagtctat 418 |||||| |||||||||||||||| ||||||||||||||| | |||||||| ||||||||| Sbjct: 122 ggaactagtgggaaatggggcctgtggattctccacaaacttgtgcttactggagtctat 181 Query: 419 ggtttgattgttttcatgcatcactcaaggtggaaagacaggctacctgcaaaaccggca 478 || ||||||||||||||||||| ||||| |||| ||||||||| ||||||||||| ||| Sbjct: 182 gggctgattgttttcatgcatcattcaagatggagagacaggctgcctgcaaaaccagca 241 Query: 479 tattaccagtatgtgtgtgcaatgctggcacttaacggcctatcgctgtttggctgtttc 538 || ||| | ||||| |||| ||| || ||| || ||| |||| |||||||| |||||| Sbjct: 242 tactacaactatgtatgtgtgatgttgctactgaatggcatatcactgtttggatgtttc 301 Query: 539 ctcgttacatgtggagctggatttggtctatggctttacaacctcactactgtctgttac 598 || || || ||||||||||||||||| ||||| | || || ||||| || || || || Sbjct: 302 cttattgcaagtggagctggatttggtttatggttatataatctcacaaccgtatgctat 361 Query: 599 catgctctttaccttc 614 ||| |||||||||||| Sbjct: 362 cattctctttaccttc 377
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 236 bits (119), Expect = 7e-59 Identities = 176/195 (90%) Strand = Plus / Minus Query: 113 caggtgtggcagtgtatgcctgatagggcattctcatggaatgtgctttcattgtttacc 172 |||| |||||| ||||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 30918687 caggcgtggcaatgtatgcctgatagggcgttctcatggaatgtgctgtctctgtttacc 30918628 Query: 173 aaatcgggaatgttattcttggaagttagtcttatagcatttctgcttcaaggaaatgaa 232 ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 30918627 aaatcagggatgttattcttggaagttagtctcatagcatttctgcttcaaggaaacgaa 30918568 Query: 233 gccagtggttatgagtctttgggacgtacctttgtcatctctggtgctgtagttagtgct 292 ||||||||| ||| ||||||| |||||| ||||| |||||||| ||||||||| |||| Sbjct: 30918567 accagtggttttgaatctttggcacgtacgtttgttatctctggagctgtagttgctgct 30918508 Query: 293 gatgtattgctcaag 307 ||||||||||||||| Sbjct: 30918507 gatgtattgctcaag 30918493 Score = 200 bits (101), Expect = 4e-48 Identities = 110/113 (97%) Strand = Plus / Minus Query: 5 cgccgcagcttccgccgcctcagctacggccgctcccacgtcgtcgtcgtcgcctactac 64 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30919467 cgccggagcttccgccgcctcagctacggccgctcccacgtcgtcgtcgtcgcctactac 30919408 Query: 65 gcgctcctctgggccgtcgccctcctcaacctcctctggtgcttcctccaggt 117 ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 30919407 gcgctcctctgggccgtcgccgtcctcaacctcctctggtgcttcctgcaggt 30919355 Score = 163 bits (82), Expect = 8e-37 Identities = 142/162 (87%) Strand = Plus / Minus Query: 306 agaccatatatgtattcggctttggtgttcctttgtttatcgatgctgaccaaggaactg 365 |||| |||||||| || || |||||||| ||||||| || |||| |||||||||||||| Sbjct: 30917794 agactatatatgtttttgggtttggtgtctctttgttcattgatgttgaccaaggaactg 30917735 Query: 366 gtgggaaatggggcctatggattctccacaaattggtgcttacaggagtctatggtttga 425 ||||||| |||||||||||| |||| ||||||||||||||||| || |||||||| ||| Sbjct: 30917734 gtgggaagtggggcctatggtttctacacaaattggtgcttactggtgtctatggcctga 30917675 Query: 426 ttgttttcatgcatcactcaaggtggaaagacaggctacctg 467 |||| |||||| ||||||||||||||| ||||||| |||||| Sbjct: 30917674 ttgtgttcatgtatcactcaaggtggagagacaggttacctg 30917633 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 519 tatcgctgtttggctgtttcctcgttacatgtggagctggatttggtctatgg 571 |||| |||||||| |||||||| ||| || |||||||||||||||| ||||| Sbjct: 30917491 tatcactgtttggatgtttccttgttgcaactggagctggatttggtttatgg 30917439 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ccacgtcgtcgtcgtcgcct 59 |||||||||||||||||||| Sbjct: 3303290 ccacgtcgtcgtcgtcgcct 3303309
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 236 bits (119), Expect = 7e-59 Identities = 176/195 (90%) Strand = Plus / Plus Query: 113 caggtgtggcagtgtatgcctgatagggcattctcatggaatgtgctttcattgtttacc 172 |||| |||||| ||||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 24403 caggcgtggcaatgtatgcctgatagggcgttctcatggaatgtgctgtctctgtttacc 24462 Query: 173 aaatcgggaatgttattcttggaagttagtcttatagcatttctgcttcaaggaaatgaa 232 ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 24463 aaatcagggatgttattcttggaagttagtctcatagcatttctgcttcaaggaaacgaa 24522 Query: 233 gccagtggttatgagtctttgggacgtacctttgtcatctctggtgctgtagttagtgct 292 ||||||||| ||| ||||||| |||||| ||||| |||||||| ||||||||| |||| Sbjct: 24523 accagtggttttgaatctttggcacgtacgtttgttatctctggagctgtagttgctgct 24582 Query: 293 gatgtattgctcaag 307 ||||||||||||||| Sbjct: 24583 gatgtattgctcaag 24597 Score = 200 bits (101), Expect = 4e-48 Identities = 110/113 (97%) Strand = Plus / Plus Query: 5 cgccgcagcttccgccgcctcagctacggccgctcccacgtcgtcgtcgtcgcctactac 64 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23623 cgccggagcttccgccgcctcagctacggccgctcccacgtcgtcgtcgtcgcctactac 23682 Query: 65 gcgctcctctgggccgtcgccctcctcaacctcctctggtgcttcctccaggt 117 ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 23683 gcgctcctctgggccgtcgccgtcctcaacctcctctggtgcttcctgcaggt 23735 Score = 163 bits (82), Expect = 8e-37 Identities = 142/162 (87%) Strand = Plus / Plus Query: 306 agaccatatatgtattcggctttggtgttcctttgtttatcgatgctgaccaaggaactg 365 |||| |||||||| || || |||||||| ||||||| || |||| |||||||||||||| Sbjct: 25296 agactatatatgtttttgggtttggtgtctctttgttcattgatgttgaccaaggaactg 25355 Query: 366 gtgggaaatggggcctatggattctccacaaattggtgcttacaggagtctatggtttga 425 ||||||| |||||||||||| |||| ||||||||||||||||| || |||||||| ||| Sbjct: 25356 gtgggaagtggggcctatggtttctacacaaattggtgcttactggtgtctatggcctga 25415 Query: 426 ttgttttcatgcatcactcaaggtggaaagacaggctacctg 467 |||| |||||| ||||||||||||||| ||||||| |||||| Sbjct: 25416 ttgtgttcatgtatcactcaaggtggagagacaggttacctg 25457 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 519 tatcgctgtttggctgtttcctcgttacatgtggagctggatttggtctatgg 571 |||| |||||||| |||||||| ||| || |||||||||||||||| ||||| Sbjct: 25599 tatcactgtttggatgtttccttgttgcaactggagctggatttggtttatgg 25651
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 236 bits (119), Expect = 7e-59 Identities = 176/195 (90%) Strand = Plus / Minus Query: 113 caggtgtggcagtgtatgcctgatagggcattctcatggaatgtgctttcattgtttacc 172 |||| |||||| ||||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 31009210 caggcgtggcaatgtatgcctgatagggcgttctcatggaatgtgctgtctctgtttacc 31009151 Query: 173 aaatcgggaatgttattcttggaagttagtcttatagcatttctgcttcaaggaaatgaa 232 ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 31009150 aaatcagggatgttattcttggaagttagtctcatagcatttctgcttcaaggaaacgaa 31009091 Query: 233 gccagtggttatgagtctttgggacgtacctttgtcatctctggtgctgtagttagtgct 292 ||||||||| ||| ||||||| |||||| ||||| |||||||| ||||||||| |||| Sbjct: 31009090 accagtggttttgaatctttggcacgtacgtttgttatctctggagctgtagttgctgct 31009031 Query: 293 gatgtattgctcaag 307 ||||||||||||||| Sbjct: 31009030 gatgtattgctcaag 31009016 Score = 200 bits (101), Expect = 4e-48 Identities = 110/113 (97%) Strand = Plus / Minus Query: 5 cgccgcagcttccgccgcctcagctacggccgctcccacgtcgtcgtcgtcgcctactac 64 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31009990 cgccggagcttccgccgcctcagctacggccgctcccacgtcgtcgtcgtcgcctactac 31009931 Query: 65 gcgctcctctgggccgtcgccctcctcaacctcctctggtgcttcctccaggt 117 ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 31009930 gcgctcctctgggccgtcgccgtcctcaacctcctctggtgcttcctgcaggt 31009878 Score = 163 bits (82), Expect = 8e-37 Identities = 142/162 (87%) Strand = Plus / Minus Query: 306 agaccatatatgtattcggctttggtgttcctttgtttatcgatgctgaccaaggaactg 365 |||| |||||||| || || |||||||| ||||||| || |||| |||||||||||||| Sbjct: 31008317 agactatatatgtttttgggtttggtgtctctttgttcattgatgttgaccaaggaactg 31008258 Query: 366 gtgggaaatggggcctatggattctccacaaattggtgcttacaggagtctatggtttga 425 ||||||| |||||||||||| |||| ||||||||||||||||| || |||||||| ||| Sbjct: 31008257 gtgggaagtggggcctatggtttctacacaaattggtgcttactggtgtctatggcctga 31008198 Query: 426 ttgttttcatgcatcactcaaggtggaaagacaggctacctg 467 |||| |||||| ||||||||||||||| ||||||| |||||| Sbjct: 31008197 ttgtgttcatgtatcactcaaggtggagagacaggttacctg 31008156 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 519 tatcgctgtttggctgtttcctcgttacatgtggagctggatttggtctatgg 571 |||| |||||||| |||||||| ||| || |||||||||||||||| ||||| Sbjct: 31008014 tatcactgtttggatgtttccttgttgcaactggagctggatttggtttatgg 31007962 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ccacgtcgtcgtcgtcgcct 59 |||||||||||||||||||| Sbjct: 3303401 ccacgtcgtcgtcgtcgcct 3303420
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 186 bits (94), Expect = 6e-44 Identities = 145/162 (89%) Strand = Plus / Minus Query: 306 agaccatatatgtattcggctttggtgttcctttgtttatcgatgctgaccaaggaactg 365 |||| |||||||| || |||||||||||||||||||| || |||| ||| |||||||||| Sbjct: 85784 agactatatatgtttttggctttggtgttcctttgttcattgatgttgatcaaggaactg 85725 Query: 366 gtgggaaatggggcctatggattctccacaaattggtgcttacaggagtctatggtttga 425 |||| ||||||||||||||||||||||||||| | |||||||| ||||||||||| ||| Sbjct: 85724 gtggaaaatggggcctatggattctccacaaacttgtgcttactggagtctatggcctga 85665 Query: 426 ttgttttcatgcatcactcaaggtggaaagacaggctacctg 467 |||||||||||||||| ||||| |||| ||||||||| |||| Sbjct: 85664 ttgttttcatgcatcattcaagatggagagacaggctgcctg 85623 Score = 184 bits (93), Expect = 2e-43 Identities = 165/189 (87%) Strand = Plus / Minus Query: 119 tggcagtgtatgcctgatagggcattctcatggaatgtgctttcattgtttaccaaatcg 178 ||||| ||||||||||| ||||| ||||| |||||||| || ||| ||||||| ||||| Sbjct: 86473 tggcaatgtatgcctgacagggcgttctcttggaatgtactgtcactgtttacaaaatca 86414 Query: 179 ggaatgttattcttggaagttagtcttatagcatttctgcttcaaggaaatgaagccagt 238 |||||||||||||||||| | ||||| ||||| ||||| |||||||||||||| |||||| Sbjct: 86413 ggaatgttattcttggaaatcagtctcatagcctttctacttcaaggaaatgatgccagt 86354 Query: 239 ggttatgagtctttgggacgtacctttgtcatctctggtgctgtagttagtgctgatgta 298 |||| ||| ||||||| ||| |||||||| |||||||| ||||||||| |||||||||| Sbjct: 86353 ggttttgaatctttggcacgaacctttgttatctctggagctgtagttgctgctgatgta 86294 Query: 299 ttgctcaag 307 || |||||| Sbjct: 86293 ttactcaag 86285 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 23 ctcagctacggccgctcccacgtcgtcgtcgtcgcctactacgcgctcctctgggccgtc 82 ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 87505 ctcagctacggccgctctcacgtcgtcgtagtcgcgtactacgcgctcctctgggccgtc 87446 Query: 83 gccctcctcaacctcctctggtgcttcctccaggt 117 ||| | ||||| ||||||||||||||||| ||||| Sbjct: 87445 gccgtactcaatctcctctggtgcttcctgcaggt 87411 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 515 ggcctatcgctgtttggctgtttcctcgttacatgtggagctggatttggtctatgg 571 |||||||| |||||||| ||||||||| || || ||||||||||||||||| ||||| Sbjct: 85492 ggcctatcactgtttggatgtttcctcattgcaagtggagctggatttggtttatgg 85436
>ref|NM_189185.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1485 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 36 gctcccacgtcgtcgtcgtcgcc 58 ||||||||||||||||||||||| Sbjct: 721 gctcccacgtcgtcgtcgtcgcc 743
>emb|AL591146.21| Mouse DNA sequence from clone RP23-252E4 on chromosome 11 Contains the 3' end of the Myo1d gene for myosin ID, two novel genes, the Cdk5r gene for cyclin-dependent kinase 5 regulatory subunit (p35), the Psmd11 gene for non-ATPase proteasome (prosome, macropain) 26S subunit 11, the Zfp207 gene for zinc finger protein 207 and the 3' end of the Rhbdl4 gene for rhomboid veinlet-like 4 (Drosophila), complete sequence Length = 195208 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 411 gagtctatggtttgattgttttcatgc 437 |||||| |||||||||||||||||||| Sbjct: 167550 gagtctttggtttgattgttttcatgc 167524
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 36 gctcccacgtcgtcgtcgtcgcc 58 ||||||||||||||||||||||| Sbjct: 10985804 gctcccacgtcgtcgtcgtcgcc 10985782
>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0682B08 Length = 138376 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 36 gctcccacgtcgtcgtcgtcgcc 58 ||||||||||||||||||||||| Sbjct: 14686 gctcccacgtcgtcgtcgtcgcc 14664
>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487H02 Length = 145491 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 36 gctcccacgtcgtcgtcgtcgcc 58 ||||||||||||||||||||||| Sbjct: 88646 gctcccacgtcgtcgtcgtcgcc 88624
>emb|CR855374.5| Zebrafish DNA sequence from clone CH211-9M16 in linkage group 16, complete sequence Length = 78429 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 572 ctttacaacctcactactgtctgtta 597 ||||||||| |||||||||||||||| Sbjct: 5571 ctttacaacatcactactgtctgtta 5546
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 342 ttatcgatgctgaccaaggaac 363 |||||||||||||||||||||| Sbjct: 38031 ttatcgatgctgaccaaggaac 38052
>emb|AL844887.10| Zebrafish DNA sequence from clone DKEY-66C10, complete sequence Length = 243870 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 572 ctttacaacctcactactgtctgtta 597 ||||||||| |||||||||||||||| Sbjct: 125309 ctttacaacatcactactgtctgtta 125284
>gb|AC168852.2| Mus musculus BAC clone RP24-191L21 from chromosome 6, complete sequence Length = 171677 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 ccaggtgtggcagtgtatgcc 132 ||||||||||||||||||||| Sbjct: 150079 ccaggtgtggcagtgtatgcc 150099
>gb|AC121593.3| Mus musculus BAC clone RP23-292N18 from 6, complete sequence Length = 179881 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 ccaggtgtggcagtgtatgcc 132 ||||||||||||||||||||| Sbjct: 175252 ccaggtgtggcagtgtatgcc 175232
>emb|AL449323.19| Human DNA sequence from clone RP11-429L21 on chromosome 9 Contains the 5' end of the TMC1 gene for transmembrane cochlear expressed 1, complete sequence Length = 119378 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 tctgcttcaaggaaatgaagc 234 ||||||||||||||||||||| Sbjct: 113362 tctgcttcaaggaaatgaagc 113342
>gb|AC067743.10| Homo sapiens chromosome 10 clone RP11-441P16, complete sequence Length = 177795 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 330 gtgttcctttgtttatcgatg 350 ||||||||||||||||||||| Sbjct: 92782 gtgttcctttgtttatcgatg 92802
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 cgccgcctcagctacggccgctccc 41 |||||||||||| |||||||||||| Sbjct: 14323467 cgccgcctcagcaacggccgctccc 14323491
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 gtcgtcgtcgcctactacgcgctcc 71 |||| |||||||||||||||||||| Sbjct: 4091147 gtcgccgtcgcctactacgcgctcc 4091123
>dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1261_A08 Length = 162113 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 cgccgcctcagctacggccgctccc 41 |||||||||||| |||||||||||| Sbjct: 140012 cgccgcctcagcaacggccgctccc 140036
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 cgccgcctcagctacggccgctccc 41 |||||||||||| |||||||||||| Sbjct: 15270 cgccgcctcagcaacggccgctccc 15294
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 gtcgtcgtcgcctactacgcgctcc 71 |||| |||||||||||||||||||| Sbjct: 84005 gtcgccgtcgcctactacgcgctcc 83981
>emb|AL845160.8| Mouse DNA sequence from clone RP23-303O15 on chromosome 2, complete sequence Length = 170074 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctcctctggtgcttcctccaggtg 118 |||||||||||||||| |||||||| Sbjct: 132922 cctcctctggtgcttcttccaggtg 132946
>gb|AY728850.1| Zea mays cultivar B84 chalcone synthase C2-like (c2) gene, complete sequence Length = 3479 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cacgtcgtcgtcgtcgcctactac 64 ||||||||||||||||||| |||| Sbjct: 855 cacgtcgtcgtcgtcgcctgctac 878
>gb|AY728815.1| Zea mays cultivar N28HT chalcone synthase C2-like (c2) gene, complete sequence Length = 3609 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cacgtcgtcgtcgtcgcctactac 64 ||||||||||||||||||| |||| Sbjct: 872 cacgtcgtcgtcgtcgcctgctac 895
>gb|AY728813.1| Zea mays cultivar B14A chalcone synthase C2-like (c2) gene, complete sequence Length = 3560 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cacgtcgtcgtcgtcgcctactac 64 ||||||||||||||||||| |||| Sbjct: 860 cacgtcgtcgtcgtcgcctgctac 883
>gb|AY728812.1| Zea mays cultivar OH7B chalcone synthase C2-like (c2) gene, complete sequence Length = 3569 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cacgtcgtcgtcgtcgcctactac 64 ||||||||||||||||||| |||| Sbjct: 866 cacgtcgtcgtcgtcgcctgctac 889
>gb|AY728811.1| Zea mays cultivar W64A chalcone synthase C2-like (c2) gene, complete sequence Length = 3587 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cacgtcgtcgtcgtcgcctactac 64 ||||||||||||||||||| |||| Sbjct: 869 cacgtcgtcgtcgtcgcctgctac 892
>gb|AY728810.1| Zea mays cultivar B73 chalcone synthase C2-like (c2) gene, complete sequence Length = 3580 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cacgtcgtcgtcgtcgcctactac 64 ||||||||||||||||||| |||| Sbjct: 859 cacgtcgtcgtcgtcgcctgctac 882
>gb|AY728808.1| Zea mays cultivar Ky21 chalcone synthase C2-like (c2) gene, complete sequence Length = 3551 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cacgtcgtcgtcgtcgcctactac 64 ||||||||||||||||||| |||| Sbjct: 832 cacgtcgtcgtcgtcgcctgctac 855
>gb|AC125012.12| Mus musculus chromosome 7, clone RP24-143K11, complete sequence Length = 141809 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 gtatgtgtgtgcaatgctggcact 510 |||||||| ||||||||||||||| Sbjct: 53765 gtatgtgtctgcaatgctggcact 53788
>ref|XM_606026.2| PREDICTED: Bos taurus similar to Group III secretory phospholipase A2 precursor (Phosphatidylcholine 2-acylhydrolase GIII) (GIII sPLA2) (LOC527631), mRNA Length = 2490 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 ggcccgccgcagcttccgccgcct 24 |||| ||||||||||||||||||| Sbjct: 1101 ggcctgccgcagcttccgccgcct 1124
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tcatctctggtgctgtagtt 286 |||||||||||||||||||| Sbjct: 70337 tcatctctggtgctgtagtt 70318
>gb|AY940168.1| Cyanophage P-SSM4, complete genome Length = 178249 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tcatctctggtgctgtagtt 286 |||||||||||||||||||| Sbjct: 171128 tcatctctggtgctgtagtt 171147
>gb|AC163222.4| Mus musculus chromosome 7, clone RP24-157O12, complete sequence Length = 180557 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 gtatgtgtgtgcaatgctggcact 510 |||||||| ||||||||||||||| Sbjct: 135996 gtatgtgtctgcaatgctggcact 136019
>ref|NM_001008583.1| Danio rerio zgc:103705 (zgc:103705), mRNA Length = 1155 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 gccctcctcaacctcctctg 102 |||||||||||||||||||| Sbjct: 589 gccctcctcaacctcctctg 570
>emb|CR352226.16| Zebrafish DNA sequence from clone CH211-209L18 in linkage group 22, complete sequence Length = 209197 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 attgttttcatgcatcactc 444 |||||||||||||||||||| Sbjct: 69229 attgttttcatgcatcactc 69210
>gb|AC139757.4| Mus musculus BAC clone RP23-440H11 from chromosome 18, complete sequence Length = 193847 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gtgcttcctccaggtgtggc 122 |||||||||||||||||||| Sbjct: 35325 gtgcttcctccaggtgtggc 35344
>gb|AC121998.2| Mus musculus BAC clone RP24-318H5 from 2, complete sequence Length = 135317 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 tccaggtgtggcagtgtatgcctg 134 ||||||||||||||||| |||||| Sbjct: 102331 tccaggtgtggcagtgtgtgcctg 102354
>emb|AL451046.8| Human DNA sequence from clone RP11-174C7 on chromosome 6 Contains a ubiquitin-like 1 (sentrin) (UBL1) pseudogene, a novel pseudogene, a pyridoxal (pyridoxine, vitamin B6) kinase (PDXK) pseudogene and a novel gene, complete sequence Length = 105692 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctcatggaatgtgctttcat 164 |||||||||||||||||||| Sbjct: 30914 ctcatggaatgtgctttcat 30895
>emb|AL445683.11| Human DNA sequence from clone RP11-57K1 on chromosome 9q34.11-34.2, complete sequence Length = 180396 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 ctttggtgttcctttgttta 344 |||||||||||||||||||| Sbjct: 174791 ctttggtgttcctttgttta 174772
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 cctcctctggtgcttcctccaggtgtgg 121 ||||| |||||| ||||||||||||||| Sbjct: 642177 cctccactggtgattcctccaggtgtgg 642150
>emb|AL355309.27| Human DNA sequence from clone RP11-332E4 on chromosome Xq26.3-27.3 Contains a ribosomal protein L28 (RPL28) pseudogene, complete sequence Length = 94784 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 311 atatatgtattcggctttggtgtt 334 |||||||||||| ||||||||||| Sbjct: 56823 atatatgtattctgctttggtgtt 56800
>emb|AL034424.9|HS257E24 Human DNA sequence from clone RP1-257E24 on chromosome 20q12-13.1 Contains the 3' end of the SLC13A3 gene for member 3 of solute carrier family 13 (sodium-dependent dicarboxylate transporter), the C20orf123 gene for chromosome 20 open reading frame 123, the 5' end of a novel zinc finger protein gene, ESTs, STSs and GSSs, complete sequence Length = 127735 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 tccaggtgtggcagtgtatgcctg 134 |||||||||| ||||||||||||| Sbjct: 111720 tccaggtgtgtcagtgtatgcctg 111697
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ccacgtcgtcgtcgtcgcct 59 |||||||||||||||||||| Sbjct: 125924 ccacgtcgtcgtcgtcgcct 125905
>gb|AC144546.9| Homo sapiens 3 BAC RP11-62D17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 47252 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ggtgtggcagtgtatgcctg 134 |||||||||||||||||||| Sbjct: 22942 ggtgtggcagtgtatgcctg 22923
>gb|AY119755.1| Pavlova lutheri photosystem II reaction center protein D1 (psbA) gene, partial cds; chloroplast gene for chloroplast product Length = 957 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tcatctctggtgctgtagtt 286 |||||||||||||||||||| Sbjct: 191 tcatctctggtgctgtagtt 210
>gb|AY119754.1| Pavlova gyrans photosystem II reaction center protein D1 (psbA) gene, partial cds; chloroplast gene for chloroplast product Length = 933 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tcatctctggtgctgtagtt 286 |||||||||||||||||||| Sbjct: 191 tcatctctggtgctgtagtt 210
>emb|BX936324.6| Zebrafish DNA sequence from clone CH211-74F16 in linkage group 3, complete sequence Length = 154312 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tttgattgttttcatgcatcactc 444 ||||||| |||||||||||||||| Sbjct: 139301 tttgatttttttcatgcatcactc 139278
>emb|CR847548.8| Zebrafish DNA sequence from clone DKEY-185L9 in linkage group 8, complete sequence Length = 249728 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gttttcatgcatcactcaag 447 |||||||||||||||||||| Sbjct: 5416 gttttcatgcatcactcaag 5397
>gb|BC086846.1| Danio rerio zgc:103705, mRNA (cDNA clone MGC:103705 IMAGE:7264555), complete cds Length = 1155 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 gccctcctcaacctcctctg 102 |||||||||||||||||||| Sbjct: 589 gccctcctcaacctcctctg 570
>gb|AC090506.7| Homo sapiens chromosome 18, clone RP11-675P14, complete sequence Length = 188609 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 tccaggtgtggcagtgtatgcctg 134 ||||||||||| |||||||||||| Sbjct: 89054 tccaggtgtggtagtgtatgcctg 89077
>gb|AC079336.5| Homo sapiens chromosome 17, clone RP11-466A19, complete sequence Length = 168851 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 tggtttgattgttttcatgc 437 |||||||||||||||||||| Sbjct: 95166 tggtttgattgttttcatgc 95147
>gb|AC108695.2| Homo sapiens 3 BAC RP11-744C8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190845 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 cctcctctggtgcttcctccaggtgtgg 121 |||||||||||| | ||||||||||||| Sbjct: 173757 cctcctctggtgatacctccaggtgtgg 173730
>gb|DQ401490.1| Uncultured organism clone cDNA4 photosystem II D1 (psbA) mRNA, partial cds Length = 849 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tcatctctggtgctgtagtt 286 |||||||||||||||||||| Sbjct: 59 tcatctctggtgctgtagtt 78
>gb|AC021909.7| Homo sapiens, clone RP11-22F19, complete sequence Length = 178621 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 cctcctctggtgcttcctccaggtgtgg 121 ||||| |||||| ||||||||||||||| Sbjct: 106352 cctccactggtgattcctccaggtgtgg 106325
>gb|AY176627.1| Uncultured alga clone RED132-2-6 PsbA (psbA) gene, partial cds; plastid gene for plastid product Length = 849 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tcatctctggtgctgtagtt 286 |||||||||||||||||||| Sbjct: 59 tcatctctggtgctgtagtt 78
>gb|AY176625.1| Uncultured cyanobacterium clone RED132-6-1 PsbA (psbA) gene, partial cds Length = 839 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tcatctctggtgctgtagtt 286 |||||||||||||||||||| Sbjct: 58 tcatctctggtgctgtagtt 77
>gb|AY176608.1| Uncultured alga clone HOT2-10 PsbA (psbA) gene, partial cds; plastid gene for plastid product Length = 855 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tcatctctggtgctgtagtt 286 |||||||||||||||||||| Sbjct: 59 tcatctctggtgctgtagtt 78
>gb|AY176597.1| Uncultured cyanobacterium clone HOT4-16 PsbA (psbA) gene, partial cds Length = 849 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tcatctctggtgctgtagtt 286 |||||||||||||||||||| Sbjct: 59 tcatctctggtgctgtagtt 78
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 cctcctctggtgcttcctccaggtgtgg 121 ||||| |||||| ||||||||||||||| Sbjct: 642177 cctccactggtgattcctccaggtgtgg 642150
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 acggccgctcccacgtcgtcgtcg 53 |||||||| ||||||||||||||| Sbjct: 1349907 acggccgcgcccacgtcgtcgtcg 1349930
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cccacgtcgtcgtcgtcgcc 58 |||||||||||||||||||| Sbjct: 27639253 cccacgtcgtcgtcgtcgcc 27639234
>gb|AC134507.2| Homo sapiens 3 BAC RP11-674K24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114169 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ggtgtggcagtgtatgcctg 134 |||||||||||||||||||| Sbjct: 14283 ggtgtggcagtgtatgcctg 14264
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ccacgtcgtcgtcgtcgcct 59 |||||||||||||||||||| Sbjct: 128163 ccacgtcgtcgtcgtcgcct 128182
>gb|AC139353.3| Homo sapiens chromosome 19 clone LLNLR-257F11, complete sequence Length = 38480 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ttctgcttcaaggaaatgaa 232 |||||||||||||||||||| Sbjct: 12891 ttctgcttcaaggaaatgaa 12910
>gb|AC016559.3| Homo sapiens chromosome 5 clone CTC-422A18, complete sequence Length = 143039 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 tccaggtgtggcagtgtatgcctg 134 |||||||||||||||| ||||||| Sbjct: 44797 tccaggtgtggcagtgcatgcctg 44774
>gb|AC002119.2| Homo sapiens chromosome 17, clone CTC-347H5, complete sequence Length = 107977 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 tggtttgattgttttcatgc 437 |||||||||||||||||||| Sbjct: 73552 tggtttgattgttttcatgc 73571
>dbj|AP006055.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0778G11 Length = 59211 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cccacgtcgtcgtcgtcgcc 58 |||||||||||||||||||| Sbjct: 43436 cccacgtcgtcgtcgtcgcc 43417
>emb|BX085195.5| Zebrafish DNA sequence from clone DKEY-226A5 in linkage group 3, complete sequence Length = 227111 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 tttgattgttttcatgcatcactc 444 ||||||| |||||||||||||||| Sbjct: 73784 tttgatttttttcatgcatcactc 73807
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 tgctgaccaaggaactggtg 368 |||||||||||||||||||| Sbjct: 5298166 tgctgaccaaggaactggtg 5298147
>emb|AL929440.5| Mouse DNA sequence from clone RP23-292F11 on chromosome 2, complete sequence Length = 143594 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 tccaggtgtggcagtgtatgcctg 134 ||||||||||||||||| |||||| Sbjct: 142898 tccaggtgtggcagtgtgtgcctg 142875
>emb|AJ575575.1|PGY575575 Pavlova gyrans chloroplast partial psbA gene for photosystem II reaction center protein D1 Length = 807 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tcatctctggtgctgtagtt 286 |||||||||||||||||||| Sbjct: 59 tcatctctggtgctgtagtt 78
>emb|AL928665.8| Mouse DNA sequence from clone RP23-294O23 on chromosome 2, complete sequence Length = 81950 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 tccaggtgtggcagtgtatgcctg 134 ||||||||||||||||| |||||| Sbjct: 1304 tccaggtgtggcagtgtgtgcctg 1281
>emb|AL845490.8| Mouse DNA sequence from clone RP23-259M16 on chromosome 2, complete sequence Length = 200794 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 ttggctgtttcctcgttaca 547 |||||||||||||||||||| Sbjct: 50659 ttggctgtttcctcgttaca 50640
>gb|M63796.1|HUMMMDA Human DNA from cosmid MMDA from chromosome 19q13.3 (obtained by automated sequence analysis) Length = 37314 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 ttctgcttcaaggaaatgaa 232 |||||||||||||||||||| Sbjct: 26520 ttctgcttcaaggaaatgaa 26501
>gb|AC090503.12| Homo sapiens 12q BAC RP11-314D7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 221074 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 tccaggtgtggcagtgtatgcctg 134 |||||||||||||||| ||||||| Sbjct: 63631 tccaggtgtggcagtgcatgcctg 63654 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,797,137 Number of Sequences: 3902068 Number of extensions: 5797137 Number of successful extensions: 134375 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 133223 Number of HSP's gapped (non-prelim): 1150 length of query: 614 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 591 effective length of database: 17,143,297,704 effective search space: 10131688943064 effective search space used: 10131688943064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)