>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)|
          Length = 1336

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 24/64 (37%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
 Frame = +1

Query: 4    RHEGPPXPGRP--LCSPHTISRGIGEEDDDEEKALQGP*DGAEGVRDPPRLGLPVGDGHQ 177
            R  G P  GR   L +P    R  G    D     + P  G E  RD PR   P  DGH 
Sbjct: 1151 RGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDTPRPDHPPHDGHS 1210

Query: 178  QASR 189
             ASR
Sbjct: 1211 PASR 1214

>IPL1_CANAL (Q59S66) Spindle assembly checkpoint kinase (EC 2.7.11.1) (Aurora|
           kinase)
          Length = 530

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = -1

Query: 549 TRKAETRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSA--AAE 376
           T    +  S++   S++  S++  V  P+N+P+  HT      R+ S ++Y SSA   A 
Sbjct: 101 TPTKNSSSSSSSSHSSSLLSSSPFVEEPENQPESNHTRATSHYRTTSTSQYKSSANKDAS 160

Query: 375 HDVTSRYAAAWSRRKISQS 319
           H + +      S ++ S+S
Sbjct: 161 HSLITSSKRKTSTKQTSES 179

>DNMT1_CHICK (Q92072) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1)|
           (DNA methyltransferase GgaI) (DNA MTase GgaI) (MCMT)
           (M.GgaI)
          Length = 1537

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 15/70 (21%), Positives = 38/70 (54%)
 Frame = -1

Query: 540 AETRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVTS 361
           + +  S++  SS+++ S++  +  P+ R      S  ++ +SP+ +R T S+  +  + S
Sbjct: 130 SSSSSSSSSSSSSSSSSSSSLLPAPRARKARRSRSNGESKKSPASSRVTRSSGRQPTILS 189

Query: 360 RYAAAWSRRK 331
            ++   ++RK
Sbjct: 190 VFSKGSTKRK 199

>PKSM_BACSU (P40872) Putative polyketide synthase pksM|
          Length = 4262

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +1

Query: 145  RLGLPVGDGHQQASR*HLRGDQLLQPLRLQVFSLHQRRHCRLFRGLHPNA 294
            ++GL  G+G+Q   + ++  DQLL  + L  F  + ++H  L   L  +A
Sbjct: 1164 KIGLDYGEGYQGIEKVYVGKDQLLAKISLPAFLKNDKQHFALHPSLMDSA 1213

>RAI2_HUMAN (Q9Y5P3) Retinoic acid-induced protein 2|
          Length = 530

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 79  LPHRCPC*SCAVNRGAFRGEEDPRAE 2
           LP   PC S  ++   F+G EDP A+
Sbjct: 140 LPQEAPCSSSTIHNNLFQGAEDPEAQ 165

>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor|
          Length = 866

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = -1

Query: 534 TRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVTSRY 355
           T    T  SS+ + S   T +   N      TSP  TS SP  + +TSS ++    +S  
Sbjct: 24  TTTETTTSSSSTSGSGQSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSST 83

Query: 354 AAAWS 340
           AA  S
Sbjct: 84  AATSS 88

>POLN_HEVMY (Q04610) Non-structural polyprotein (EC 2.7.7.48) (RNA-directed RNA|
            polymerase/Helicase)
          Length = 1693

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 139  DHAHPQRHLRDLEGPSPRRHLPHRCPC*SCAVNRGAF 29
            +HA     +R   GP+   H+ HRCP   C + RGA+
Sbjct: 1064 EHAGLVPAIRPDLGPTSWWHVTHRCPADVCELIRGAY 1100

>NUOL_CAMJE (Q9PMA7) NADH-quinone oxidoreductase chain L (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain L) (NDH-1, chain L)
          Length = 596

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 24/84 (28%), Positives = 39/84 (46%)
 Frame = +2

Query: 71  VRKMTTRRRPFKVPEMALRVCVIPLALASLWEMATNKQADDTYGEISFSNLSGFKYLVCI 250
           ++KM    +P K+   A+ +C+  LALA ++  A     D   G    S   G   ++ I
Sbjct: 351 IKKMGGLFKPLKIT--AILMCIGSLALAGIYPFAGFFSKDLILGYSFISFHHGIFLVLLI 408

Query: 251 NAVTAAYSVASILMPSFKSRARYD 322
            A   A+    +LM  F + AR+D
Sbjct: 409 AAFLTAFYSFRLLMLVFFTPARHD 432

>GPMI_SYNPX (Q7U8U2) 2,3-bisphosphoglycerate-independent phosphoglycerate|
           mutase (EC 5.4.2.1) (Phosphoglyceromutase)
           (BPG-independent PGAM) (iPGM)
          Length = 543

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 113 QGP*RAFXXXXXXSPMPLLIVCGEQRGLPGXG 18
           QGP          +P+P ++V GEQR LPG G
Sbjct: 457 QGPDGQAWTAHTTNPVPCILVEGEQRKLPGHG 488

>ZIC2_XENLA (Q91689) Zinc finger protein ZIC 2 (Zinc finger protein of the|
           cerebellum 2) (Zinc finger DNA-binding protein fZic)
          Length = 501

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 20/74 (27%), Positives = 36/74 (48%)
 Frame = -1

Query: 567 PSNSRKTRKAETRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSS 388
           PS+ RK  K         +SS AA S  ++   P         SP+  +++P+L+   ++
Sbjct: 424 PSSLRKHMKVHESSPQGSESSPAASSGYESSTPPGL------VSPNSETQNPNLSPAAAA 477

Query: 387 AAAEHDVTSRYAAA 346
            +A H+V+S  + A
Sbjct: 478 VSAVHNVSSGASGA 491

>VGLX_EHV1B (P28968) Glycoprotein X precursor|
          Length = 797

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = -1

Query: 534 TRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVTSRY 355
           T    T  SS+ + S   T +   N      TSP  TS SP  + +TSS ++    +S  
Sbjct: 24  TTTETTTSSSSTSGSGQSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSST 83

Query: 354 AAAWS 340
           AA  S
Sbjct: 84  AATSS 88

>CREA_BOTCI (O94130) DNA-binding protein creA (Carbon catabolite repressor)|
          Length = 435

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = -1

Query: 534 TRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVTSRY 355
           T  +  ++ S+   +       P+++P   H+S +  +  PSL  Y  + A  H+    Y
Sbjct: 219 TAATQVERESSTTATHYSQHTQPRHQPYYSHSSHNSRNHLPSLQAYAMTRAHSHEEDDHY 278

Query: 354 AAAWSRR 334
           A   ++R
Sbjct: 279 AHRHAKR 285


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,360,242
Number of Sequences: 219361
Number of extensions: 1158364
Number of successful extensions: 4098
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4093
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)