>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  192 bits (489), Expect = 1e-49
 Identities = 96/98 (97%), Positives = 96/98 (97%)
 Frame = +3

Query: 51  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 230
           MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 60

Query: 231 WKGLAYDISDDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
           WKGLAYDISDDQQDITRGKGIVDSL QAPTG GTHEAV
Sbjct: 61  WKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAV 98

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  166 bits (419), Expect = 2e-41
 Identities = 86/100 (86%), Positives = 89/100 (89%), Gaps = 2/100 (2%)
 Frame = +3

Query: 51  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT-- 224
           MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSS  NRF VMA E +DE + T  
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQ 59

Query: 225 DKWKGLAYDISDDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
           D+WKGLAYDISDDQQDITRGKG VDSL QAPTGDGTHEAV
Sbjct: 60  DRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAV 99

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  142 bits (358), Expect = 2e-34
 Identities = 77/104 (74%), Positives = 87/104 (83%), Gaps = 6/104 (5%)
 Frame = +3

Query: 51  MAAAFSSTVGAPASTPT--NFLGKKLKK-QVTSAVNYHGKSSKAN-RFTVMAAENIDEKR 218
           MAAAFSSTVGAPASTPT  +FLGKKL K QV++AV YHGKSS +N RF  MAA+ +DE +
Sbjct: 1   MAAAFSSTVGAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETK 60

Query: 219 NTD--KWKGLAYDISDDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
            TD  +WKGLAYDISDDQQDITRGKG+VD+L QAP GDGTH AV
Sbjct: 61  QTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAV 104

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  122 bits (306), Expect = 2e-28
 Identities = 68/102 (66%), Positives = 78/102 (76%), Gaps = 4/102 (3%)
 Frame = +3

Query: 51  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNT 224
           MA+AFSSTVGAPASTPT FLGKK+K        YHG +   +R   VMAA+  +D+ + T
Sbjct: 1   MASAFSSTVGAPASTPTIFLGKKVKNY------YHGGNKMKSRVVRVMAAKKELDQGKQT 54

Query: 225 D--KWKGLAYDISDDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
           D  +WKGLAYDISDDQQDITRGKGIVDSL QAP GDGTHEA+
Sbjct: 55  DADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAI 96

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score = 87.8 bits (216), Expect = 6e-18
 Identities = 52/92 (56%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
 Frame = +3

Query: 78  GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 248
           GA AS PT+ F G  LKK V S V  + K +  +   V A + I+E + T  D+WKGLAY
Sbjct: 22  GAGASAPTSAFFGTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAY 80

Query: 249 DISDDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
           DISDDQQDITRGKG+VD L QAP   GTH AV
Sbjct: 81  DISDDQQDITRGKGMVDPLFQAPMDAGTHYAV 112

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score = 87.0 bits (214), Expect = 1e-17
 Identities = 50/95 (52%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
 Frame = +3

Query: 66  SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK--WKG 239
           SS+   P+ST   FLG  LKK     VN    +SK +  ++    ++DE + TDK  WKG
Sbjct: 22  SSSASVPSST---FLGSSLKK-----VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKG 73

Query: 240 LAYDISDDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
           LA+D SDDQQDITRGKG VDSL QAP G GTH A+
Sbjct: 74  LAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAI 108

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 11/109 (10%)
 Frame = +3

Query: 51  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 200
           MAAA+S TVGA    P +  G   +  +  +  + G S K          +  F ++A E
Sbjct: 1   MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59

Query: 201 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
            + D++ + DKWKGLAYDISDDQQDITRGKG+VD+L QAP   GTH AV
Sbjct: 60  ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAV 108

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 11/109 (10%)
 Frame = +3

Query: 51  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 200
           MAAA+S TVGA    P +  G   +  +  +  + G S K          +  F ++A E
Sbjct: 1   MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59

Query: 201 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
            + D++ + DKWKGLAYDISDDQQDITRGKG+VD+L QAP   GTH AV
Sbjct: 60  ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAV 108

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 48/93 (51%), Positives = 60/93 (64%)
 Frame = +3

Query: 66  SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLA 245
           S  V APAST   FLGKK    V +   +   + K+N    + A   D++ + D+W+GLA
Sbjct: 23  SGAVSAPAST---FLGKK----VVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLA 75

Query: 246 YDISDDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
           YD SDDQQDITRGKG+VDS+ QAP G GTH AV
Sbjct: 76  YDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAV 108

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score = 84.3 bits (207), Expect = 7e-17
 Identities = 52/108 (48%), Positives = 62/108 (57%), Gaps = 16/108 (14%)
 Frame = +3

Query: 69  STVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENI 206
           ST+GA   TP              T F GK LKK     V+    ++K+ R  V    ++
Sbjct: 6   STIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRI-VAEQIDV 64

Query: 207 DEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
           D K+ TD  +WKGL  D SDDQQDITRGKG+VDSL QAPTG GTH AV
Sbjct: 65  DPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAV 112

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score = 83.6 bits (205), Expect = 1e-16
 Identities = 48/92 (52%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
 Frame = +3

Query: 78  GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 248
           G  AS P++ F G  LKK ++S V  + K +  +   V A + I+E + T  D+W+GLAY
Sbjct: 22  GGGASGPSSAFFGTSLKKVISSRVP-NSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAY 80

Query: 249 DISDDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
           D+SDDQQDITRGKG+VDSL QAP   GTH AV
Sbjct: 81  DVSDDQQDITRGKGLVDSLFQAPMDAGTHYAV 112

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score = 81.6 bits (200), Expect = 4e-16
 Identities = 49/110 (44%), Positives = 61/110 (55%), Gaps = 14/110 (12%)
 Frame = +3

Query: 57  AAFSSTVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMA 194
           AA  ST+GA +  P              T F GK LKK     V+       +NR   + 
Sbjct: 2   AASVSTIGAASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVS---SPKVSNRNLRVV 58

Query: 195 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
           A+ +DE +  D+WKGL  + SDDQQDI RGKG+VDSL QAPTG GTH A+
Sbjct: 59  AQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAI 107

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score = 80.9 bits (198), Expect = 7e-16
 Identities = 48/99 (48%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
 Frame = +3

Query: 60  AFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE--NIDEKRNT--D 227
           + +++V   +   T F GK LKK     V+        NR   +AAE  + D K+ T  D
Sbjct: 17  SLNNSVAGTSVPSTAFFGKTLKKVYGKGVS---SPKVTNRSLRIAAEEKDADPKKQTYSD 73

Query: 228 KWKGLAYDISDDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
           +WKGL  D SDDQQDI RGKG+VDSL QAPTG GTH AV
Sbjct: 74  RWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAV 112

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 48/86 (55%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = +3

Query: 81  APASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 257
           A AS PT+ FLG  LKK           SS+    TV AAEN  E++NTDKW  LA D S
Sbjct: 23  AGASVPTSGFLGSSLKKHTNVRFP---SSSRTTSMTVKAAEN--EEKNTDKWAHLAKDFS 77

Query: 258 DDQQDITRGKGIVDSLXQAPTGDGTH 335
           DDQ DI RGKG+VDSL QAP   GTH
Sbjct: 78  DDQLDIRRGKGMVDSLFQAPADAGTH 103

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 48/110 (43%), Positives = 62/110 (56%), Gaps = 14/110 (12%)
 Frame = +3

Query: 57  AAFSSTVGAPASTPTN------------FLGKKLKKQVTSAVNYHGKSSK--ANRFTVMA 194
           AA  ST+GA   T  N            FLG +LK      V+    +SK     F ++A
Sbjct: 2   AATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK------VSSRFTTSKMVTGNFKIVA 55

Query: 195 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
            ++ +++   DKW+GLA+D SDDQQDITRGKG+ D L QAP G GTH AV
Sbjct: 56  EQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAV 105

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
 Frame = +3

Query: 213 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLXQAPTG-DGTHEAV 344
           ++   +W+ +    D SDDQQDITRG+ +VD L Q   G  GTH AV
Sbjct: 37  RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAV 83

>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae|
          Length = 209

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
 Frame = +3

Query: 81  APASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 260
           +PA+ P+  +G+K++  V+   ++ G   K++   +   +    KR T ++ G  + +SD
Sbjct: 35  SPAADPSLMIGRKVEVPVS---DFTGNFRKSSTMVIFRVKECTGKRCTTEFIG--HKVSD 89

Query: 261 D--QQDITRGKGIVDSLXQAPTGDG 329
           D  ++ + R K  +D +  + T DG
Sbjct: 90  DTIRRMVRRRKERIDIIMPSKTKDG 114

>CASZ1_MOUSE (Q9CWL2) Castor homolog 1 zinc finger protein (Castor-related|
           protein) (Fragment)
          Length = 255

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 27  QGRPSSTEMAAAFSSTVGAPASTPTNFLGKKLKKQV 134
           QG PS     +  +   G+PA  P+ FLGK +K  V
Sbjct: 52  QGNPSLESFLSIKTEAEGSPAGEPSPFLGKAVKALV 87

>DHOM_HELPJ (Q9ZL20) Homoserine dehydrogenase (EC 1.1.1.3) (HDH)|
          Length = 421

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 216 RNTDKWKGLAYDISDDQQDITRGKGI 293
           R+  K KG A++ISDD + +   KGI
Sbjct: 46  RDVKKHKGYAFEISDDLESVIEDKGI 71

>SWC3_ASHGO (Q758T8) SWR1-complex protein 3|
          Length = 688

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = +3

Query: 57  AAFSSTVGAPASTPTNF-LGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKW 233
           A  SST GAP      F  G  + K  TSA+  HG  S+      + AE     R   K+
Sbjct: 434 ATLSSTDGAPPLNRRQFPCGIWVTKMQTSALEAHGAISEKGTTITIKAEEGTAPRQKRKY 493

Query: 234 KGLAYDISDDQQDI 275
                ++ D+ + +
Sbjct: 494 TKRKKEVEDEDKSM 507

>IF2A_METJA (Q57581) Translation initiation factor 2 alpha subunit|
           (eIF-2-alpha) (aIF2-alpha)
          Length = 266

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
 Frame = +3

Query: 174 NRFTVMAAEN---IDEKRNTDKWKGLAYDISDDQQDIT--RGKGIVDSLXQAPTG 323
           N F  M  E    +D+   +++WK + Y+++ +  ++T    +G+++    AP G
Sbjct: 138 NAFETMVIEGKEVLDDLEISEEWKNVLYEVAKESIELTNVEVEGVIEMKSYAPDG 192

>RT107_YEAST (P38850) Regulator of Ty1 transposition protein 107|
          Length = 1070

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = +3

Query: 159 KSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLXQAP 317
           K  + +   +++ E++  K++TDK+  L   +SD+   I   K  V+S    P
Sbjct: 688 KQGEESTGKLISTEDVTSKKDTDKFSHLFEGLSDNDDHINDEKPAVNSKYTTP 740

>AAPP_RHILV (Q52815) General L-amino acid transport ATP-binding protein aapP|
          Length = 257

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +3

Query: 171 ANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLXQAPTGDG 329
           A + TV A E   E  N +KW G  + + D    + RG+ IV      P+G G
Sbjct: 6   AKKLTVSATEVAVEIVNMNKWYGDFHVLRDINLKVMRGERIV---IAGPSGSG 55

>CASZ1_HUMAN (Q86V15) Castor homolog 1 zinc finger protein (Castor-related|
           protein)
          Length = 1044

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 27  QGRPSSTEMAAAFSSTVGAPASTPTNFLGKKLKKQV 134
           QG P    +    +   G+PA+ P+ FLGK +K  V
Sbjct: 841 QGNPGLGSLLNIKAEAEGSPAAEPSPFLGKAVKALV 876

>KADA_METTL (P43410) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 192

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 22/89 (24%), Positives = 36/89 (40%)
 Frame = +3

Query: 78  GAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 257
           G P    T    K ++K     +NY   +     F V   EN+ E R  D+ + L  D  
Sbjct: 10  GVPGVGGTTITQKAMEKLSEEGINYKMVNFGTVMFEVAQEENLVEDR--DQMRKLDPDTQ 67

Query: 258 DDQQDITRGKGIVDSLXQAPTGDGTHEAV 344
              Q +  G+ I + + ++P    TH  +
Sbjct: 68  KRIQKLA-GRKIAEMVKESPVVVDTHSTI 95

>RS7_PSYAR (Q4FQG4) 30S ribosomal protein S7|
          Length = 157

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +3

Query: 96  PTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD 227
           P    G +   +  + V  HGK S A R    A E + +KRN +
Sbjct: 14  PDPKFGSQTVAKFINHVMSHGKKSTAERIVYGALETVSQKRNIE 57

>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)|
          Length = 1992

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +2

Query: 8   AHPPLLARSTXQHRDGCCLLLHRRGSG 88
           A  P L RST Q   G C    RRGSG
Sbjct: 315 AELPSLRRSTRQKTTGSCASTSRRGSG 341


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.122    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,938,659
Number of Sequences: 219361
Number of extensions: 660163
Number of successful extensions: 2501
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2494
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)