>ref|XM_585246.2| PREDICTED: Bos taurus similar to kinesin family member 11
            (LOC508467), partial mRNA
          Length = 3348

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 102  gagttctgattaatggctgtgt 123
            ||||||||||||||||||||||
Sbjct: 2805 gagttctgattaatggctgtgt 2826

>gb|AC097661.3| Homo sapiens BAC clone RP11-553E15 from 4, complete sequence
          Length = 169197

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 174   ctgaatgtttgtttacttccc 194
             |||||||||||||||||||||
Sbjct: 18424 ctgaatgtttgtttacttccc 18404

>gb|AC093820.2| Homo sapiens BAC clone RP11-373J7 from 4, complete sequence
          Length = 151878

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 174    ctgaatgtttgtttacttccc 194
              |||||||||||||||||||||
Sbjct: 143461 ctgaatgtttgtttacttccc 143441

>gb|AC161609.6| Mus musculus BAC clone RP23-139D15 from chromosome 14, complete sequence
          Length = 219723

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     aagagatccatgacaatgga 103
              ||||||||||||||||||||
Sbjct: 197370 aagagatccatgacaatgga 197351

>gb|BC026422.1| Mus musculus transglutaminase 1, K polypeptide, mRNA (cDNA clone
            MGC:31305 IMAGE:4221991), complete cds
          Length = 2805

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   atgacaatggagttctgatt 112
            ||||||||||||||||||||
Sbjct: 1154 atgacaatggagttctgatt 1173

>ref|NM_019984.2| Mus musculus transglutaminase 1, K polypeptide (Tgm1), mRNA
          Length = 2805

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   atgacaatggagttctgatt 112
            ||||||||||||||||||||
Sbjct: 1154 atgacaatggagttctgatt 1173

>emb|CT025679.5| Mouse DNA sequence from clone RP24-296K22 on chromosome 14, complete
              sequence
          Length = 160805

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     atgacaatggagttctgatt 112
              ||||||||||||||||||||
Sbjct: 143351 atgacaatggagttctgatt 143332

>gb|AC138400.12| Mus musculus chromosome 14, clone RP23-260C21, complete sequence
          Length = 213423

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    aagagatccatgacaatgga 103
             ||||||||||||||||||||
Sbjct: 11797 aagagatccatgacaatgga 11816

>gb|AC098877.3| Mus musculus BAC clone RP23-2C24 from 14, complete sequence
          Length = 240151

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    atgacaatggagttctgatt 112
             ||||||||||||||||||||
Sbjct: 25369 atgacaatggagttctgatt 25350

>gb|AC016252.21| Homo sapiens 3 BAC RP11-461M2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 164953

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    tctctttgctgtgtgtttat 64
             ||||||||||||||||||||
Sbjct: 16294 tctctttgctgtgtgtttat 16275

>gb|BC097305.1| Rattus norvegicus transglutaminase 1, mRNA (cDNA clone MGC:114300
            IMAGE:7462186), complete cds
          Length = 2723

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   atgacaatggagttctgatt 112
            ||||||||||||||||||||
Sbjct: 1081 atgacaatggagttctgatt 1100

>ref|NM_031659.1| Rattus norvegicus transglutaminase 1 (Tgm1), mRNA
          Length = 2707

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   atgacaatggagttctgatt 112
            ||||||||||||||||||||
Sbjct: 1125 atgacaatggagttctgatt 1144

>gb|CP000040.1| Bacillus cereus E33L plasmid pE33L466, complete sequence
          Length = 466370

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     gataaaaatctctttgctgt 56
              ||||||||||||||||||||
Sbjct: 239635 gataaaaatctctttgctgt 239616

>gb|AF186373.1|AF186373 Mus musculus transglutaminase type 1 (TGase1) mRNA, complete cds
          Length = 2737

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   atgacaatggagttctgatt 112
            ||||||||||||||||||||
Sbjct: 1097 atgacaatggagttctgatt 1116

>gb|AC163039.6| Mus musculus BAC clone RP23-188J1 from chromosome 14, complete sequence
          Length = 198538

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    aagagatccatgacaatgga 103
             ||||||||||||||||||||
Sbjct: 53658 aagagatccatgacaatgga 53639

>gb|M57263.1|RATKTRAN Rat protein-glutamine gamma-glutamyltransferase mRNA, complete cds
          Length = 2707

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   atgacaatggagttctgatt 112
            ||||||||||||||||||||
Sbjct: 1125 atgacaatggagttctgatt 1144


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,537,710
Number of Sequences: 3902068
Number of extensions: 1537710
Number of successful extensions: 110697
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110664
Number of HSP's gapped (non-prelim): 33
length of query: 204
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 182
effective length of database: 17,147,199,772
effective search space: 3120790358504
effective search space used: 3120790358504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)