>YFIG_BACSU (P54723) Hypothetical metabolite transport protein yfiG|
          Length = 482

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 202 HPSEAVAKGTKWAELFEPGVKHALFVGIGLQILQQ 306
           H  E  AK   + +  EP ++  LF+GIG+ I+QQ
Sbjct: 242 HAIEGTAKKAGFHDFQEPWIRRILFIGIGIAIVQQ 276

>GHT5_SCHPO (P78831) High-affinity glucose transporter ght5 (Hexose transporter|
           5)
          Length = 546

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 235 WAELFEPGVKHALFVGIGLQILQQ 306
           W E+F P +++  F+G+G+  LQQ
Sbjct: 254 WPEIFGPDIRYRTFLGLGVMSLQQ 277

>XYLT_LACBR (O52733) D-xylose-proton symporter (D-xylose transporter)|
          Length = 457

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 235 WAELFEPGVKHALFVGIGLQILQQ 306
           W+ELF   V+ +L +GIGL I QQ
Sbjct: 232 WSELFGKMVRPSLIIGIGLAIFQQ 255

>GATA_MYCGE (P47345) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)|
           (Glu-ADT subunit A)
          Length = 477

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
 Frame = -2

Query: 281 PTNSACFTPGSNSSAHF------VPLATASD-GCTMAGPASCCSIRSFE*RAGWLTRAAA 123
           P NS+    GS+S + +      VP + A+D G ++  PAS C++  F+   G ++R   
Sbjct: 133 PENSSLIAGGSSSGSAYAVAKDIVPFSIATDTGDSIRRPASICNVVGFKPTYGLISRNGV 192

Query: 122 WIY 114
           + Y
Sbjct: 193 FPY 195

>GUAA_CLOAB (Q97FM9) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 510

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 138 EPTCSLLEGPDRAAACWSSHGTSIRGSCQGYKV 236
           +  C L EG D   +CW SH   +    +G+KV
Sbjct: 112 DSVCELFEGIDIENSCWMSHTDRVAKVPEGFKV 144

>AMID_SYNY3 (Q55424) Putative amidase (EC 3.5.1.4)|
          Length = 506

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = -2

Query: 242 SAHFVPLATASDGC-TMAGPASCCSIRSFE*RAGWLTRAAAWIY 114
           +A  VP+A  SDG  ++  PA+CCS+  F+   G +++A    Y
Sbjct: 205 AAGLVPIAQGSDGGGSVRTPAACCSLVGFKPSRGRVSQAPVGDY 248

>HISX_VIBPA (Q87QL1) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)|
          Length = 431

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = +1

Query: 49  VSGDRRGSILSMPGGDIPPGGEYIQAAALVSQPALYSKDLIEQQLAGP----AMVHPSEA 216
           VS D RG+ + MP G      E +  A   + P   + DL+ Q   GP     +V PS  
Sbjct: 218 VSNDFRGAAIDMPAGP----SEVLVIADETADPDFIAADLLSQAEHGPDSQVVLVTPSPI 273

Query: 217 VA 222
           VA
Sbjct: 274 VA 275

>KR106_HUMAN (P60371) Keratin-associated protein 10-6 (Keratin-associated|
           protein 10.6) (High sulfur keratin-associated protein
           10.6) (Keratin-associated protein 18-6)
           (Keratin-associated protein 18.6)
          Length = 365

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
 Frame = -2

Query: 308 NCCR--ICNPMPTNSACFTPGSNSSAHFVPL----ATASDGCTMAGPASCC 174
           +CC    C P P  S   TP S  S+   P+    +    GCT +   SCC
Sbjct: 40  SCCEPPCCAPAPCLSLVCTPVSRVSSPCCPVTCEPSPCQSGCTSSCTPSCC 90

>DMSA_RHOSH (Q57366) Dimethyl sulfoxide reductase precursor (EC 1.8.99.-) (DMSO|
           reductase) (DMSOR)
          Length = 822

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +1

Query: 76  LSMPGGDIPPGGEYIQAAALVSQP-ALYSKDLIEQQLAGPAMVHPSE 213
           L++ GG +   G+Y  AAA +  P  + + ++ EQQ A P +V  ++
Sbjct: 175 LNLAGGFVNSSGDYSTAAAQIIMPHVMGTLEVYEQQTAWPVVVENTD 221

>FREM2_HUMAN (Q5SZK8) FRAS1-related extracellular matrix protein 2 precursor|
           (ECM3 homolog)
          Length = 3169

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
 Frame = +1

Query: 46  GVSGDRRGSILSMPGGDIPPGGEYIQAAALVS-------QPALYSKDLIEQQLAGPAMVH 204
           G+S  R G+  S   G  PP    +    L+S       QPA + + L+   LAG A V 
Sbjct: 8   GLSSRRTGNSTSFQPGPPPPPRLLLLLLLLLSLVSRVPAQPAAFGRALLSPGLAGAAGVP 67

Query: 205 PSEAV 219
             EA+
Sbjct: 68  AEEAI 72

>CP132_DROME (Q9VGB4) Probable cytochrome P450 313a2 (EC 1.14.-.-)|
           (CYPCCCXIIIA2)
          Length = 493

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 219 NCLGWMYHGWTSKLLLYQVLR 157
           NC+GW Y   +SKL L ++LR
Sbjct: 437 NCIGWRYGLMSSKLALVKILR 457

>CP133_DROME (Q9VGB3) Probable cytochrome P450 313a3 (EC 1.14.-.-)|
           (CYPCCCXIIIA3)
          Length = 492

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 219 NCLGWMYHGWTSKLLLYQVLR 157
           NC+GW Y   +SKL L ++LR
Sbjct: 437 NCIGWKYGLMSSKLALSKILR 457

>APOA_MACMU (P14417) Apolipoprotein(a) (EC 3.4.21.-) (Apo(a)) (Lp(a))|
           (Fragment)
          Length = 1420

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 120 PGSRSSEPTCSLLEGPDRAAACWSSHGTSIRGSCQGYKVGRTI*TWSEACTVCWH 284
           P +++S       + P+    C+   G S RGS      GRT  +WS + T  WH
Sbjct: 600 PSTQASSEEAPTEQSPE-VQDCYHGDGQSYRGSFSTTVTGRTCQSWS-SMTPHWH 652

>GUAA_STRCO (Q9L0H2) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 526

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 135 SEPTCSLLEGPDRAAACWSSHGTSIRGSCQGYKV 236
           S+P+ +L EG     + W SHG +   + +G+ V
Sbjct: 120 SKPSSTLFEGTPAEQSVWMSHGDACSAAPEGFTV 153

>GUAA_CLOTE (Q891G7) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 510

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 147 CSLLEGPDRAAACWSSHGTSIRGSCQGYKV 236
           C+L EG D+   CW SH   +     G+ +
Sbjct: 115 CALFEGIDKVQECWMSHTDYVSEIPSGFNI 144

>HISX_VIBF1 (Q5E638) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)|
          Length = 439

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = +1

Query: 49  VSGDRRGSILSMPGGDIPPGGEYIQAAALVSQPALYSKDLIEQQLAGP----AMVHPSEA 216
           VS D RG+ + MP G      E +  A   + P   + DL+ Q   GP     +V PS  
Sbjct: 218 VSNDFRGAAIDMPAGP----SEVLVIADESADPDFIAADLLSQAEHGPDSQVVLVTPSPI 273

Query: 217 VA 222
           +A
Sbjct: 274 IA 275

>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated|
           protein 10.4) (High sulfur keratin-associated protein
           10.4) (Keratin-associated protein 18-4)
           (Keratin-associated protein 18.4)
          Length = 401

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 6/50 (12%)
 Frame = -2

Query: 305 CCR--ICNPMPTNSACFTPGSNSSAHFVPL----ATASDGCTMAGPASCC 174
           CC    C P P  S   TP S  S+   P+    +    GCT +   SCC
Sbjct: 41  CCAPSCCAPAPCLSLVCTPVSRVSSPCCPVTCEPSPCQSGCTSSCTPSCC 90

>GAG_RSVP (P03322) Gag polyprotein [Contains: Core protein p19; Core protein|
           p2A; Core protein p2B; Core protein p10; Capsid protein
           p27; Inner coat protein p12; Protease p15 (EC 3.4.23.-)]
          Length = 701

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
 Frame = +1

Query: 88  GGDIPPGGEYIQA----AALVSQPALYSKDLIEQQLAG---PAMVHPSEAVAKGTKWAEL 246
           GGD PPG E  +A    A     PAL     + ++LA    P +  P     +G  W  L
Sbjct: 194 GGDTPPGAEQSRAEPGHAGQAPGPALTDWARVREELASTGPPVVAMPVVIKTEGPAWTPL 253

>ATKB_RALSO (Q8XU11) Potassium-transporting ATPase B chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase B chain) (ATP
           phosphohydrolase [potassium-transporting] B chain)
           (Potassium-binding and translocating subunit B)
          Length = 744

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 61  RRGSILSMPGGDIPPG-GEYIQAAALVSQPAL 153
           RRG I+ +  GD+ PG GE I+  A V + A+
Sbjct: 173 RRGDIVLIEAGDMVPGDGEVIEGVASVDESAI 204

>AHNK_HUMAN (Q09666) Neuroblast differentiation-associated protein AHNAK|
            (Desmoyokin) (Fragments)
          Length = 2960

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +1

Query: 10   EGGFQRIYLHEEGVSGDRRGSILSMPGGDIPPGGEYIQAAAL-VSQPALYSKDLIEQQLA 186
            EGG   ++     + GD RG  + + G D+   G  +   ++ +S P +   DL +  L 
Sbjct: 2319 EGGGAEVHAQLPSLEGDLRGPDVKLEGPDVSLKGPGVDLPSVNLSMPKVSGPDL-DLNLK 2377

Query: 187  GPAM 198
            GP++
Sbjct: 2378 GPSL 2381

>ATG1_EMENI (Q5BCU8) Serine/threonine-protein kinase atg1 (EC 2.7.11.1)|
           (Autophagy-related protein 1)
          Length = 935

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = +1

Query: 52  SGDRRGSILSMPGGDIPPGGEYIQAAALVSQPALYSKDLIEQQLAGPAMVH 204
           SGDR  S   +P    PP  E +  A    +  L  +   EQQ  G   V+
Sbjct: 411 SGDRPSSAKQIPPAAAPPRPEAVSHATAPGRQELIGRHSSEQQAPGTVPVY 461

>YUES_CAEEL (P90859) Hypothetical RING finger protein F26E4.11 in chromosome I|
          Length = 564

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 135 SEPTCSLLEGPDRAAACWSSHGTSIRGSC 221
           S P+     G DR   CW   GTS R  C
Sbjct: 322 SYPSVKCANGDDRCVVCWELLGTSRRLPC 350


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.139    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,833,588
Number of Sequences: 219361
Number of extensions: 1094897
Number of successful extensions: 3241
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3239
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)