ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25p14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1B2_DAUCA (P37707) B2 protein 243 2e-64
2Y3536_METJA (Q60257) UPF0310 protein MJECL36 33 0.66
3SERC_DROME (Q9VAN0) Probable phosphoserine aminotransferase (EC ... 33 0.66
4Y2356_ARCFU (O30314) UPF0310 protein AF2356 32 1.1
5Y875_PYRAB (Q9V0B5) UPF0310 protein PYRAB08750 31 1.9
6Y1033_PYRHO (O58764) UPF0310 protein PH1033 31 1.9
7AROK_XYLFA (Q9PDP4) Shikimate kinase (EC 2.7.1.71) (SK) 29 9.5

>B2_DAUCA (P37707) B2 protein|
          Length = 207

 Score =  243 bits (621), Expect = 2e-64
 Identities = 112/128 (87%), Positives = 119/128 (92%)
 Frame = +1

Query: 151 KRFKTLPASEALPRNEPIGGYIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFL 330
           KRFKTLP +E+LPRNE +GGYIFVCNNDTM+ENLKRQLFGLP RYRDSVRAI PGLPLFL
Sbjct: 57  KRFKTLPPAESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPLFL 116

Query: 331 YNYSTHQLHGIFEAASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKICDPLEEDAFRP 510
           YNYSTHQLHG+FEAASFGG NIDP AWEDKK  GESRFPAQVRV TRKIC+PLEED+FRP
Sbjct: 117 YNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFRP 176

Query: 511 ILHHYDGP 534
           ILHHYDGP
Sbjct: 177 ILHHYDGP 184



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>Y3536_METJA (Q60257) UPF0310 protein MJECL36|
          Length = 144

 Score = 32.7 bits (73), Expect = 0.66
 Identities = 18/99 (18%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
 Frame = +1

Query: 211 YIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLY-------NYSTHQLHGIFE 369
           ++ + N D  +   +++++G+  RY++++  ++ G  L +Y       +Y    + G++E
Sbjct: 4   WLCITNEDNWKVIKEKKIWGVAERYKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRGVYE 63

Query: 370 AASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKICDP 486
             S    +     ++    N   +FP +V++   K+ +P
Sbjct: 64  VVSEVYKD-SSKIFKPTPRNPNEKFPYRVKLKEIKVFEP 101



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>SERC_DROME (Q9VAN0) Probable phosphoserine aminotransferase (EC 2.6.1.52)|
           (PSAT)
          Length = 364

 Score = 32.7 bits (73), Expect = 0.66
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
 Frame = +1

Query: 121 GTTTTAPPRXKRFKTLPASEALPRNEPIGGYIFVCNNDTMEENLKRQLFGLPSRYRDSVR 300
           GT     P+  ++ T+P  E   + +P   Y++ C+N+T+E        G+     D V 
Sbjct: 112 GTVNAVLPKLAKYTTVPRQETW-KLDPNASYVYYCDNETVE--------GVEF---DFVP 159

Query: 301 AIRPGLPLFLYNYSTHQLHGIFEAASFG----GA--NIDPA 405
            +  G+PL + + S++ L   F+ + FG    GA  NI PA
Sbjct: 160 EVPAGVPL-VADMSSNFLSRPFDVSKFGVIYAGAQKNIGPA 199



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>Y2356_ARCFU (O30314) UPF0310 protein AF2356|
          Length = 147

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 22/111 (19%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
 Frame = +1

Query: 211 YIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLY--------NYSTHQLHGIF 366
           ++ + N D      ++ ++G+P R+++++  ++ G  L +Y             ++  ++
Sbjct: 4   WLCITNEDNWRVIKEKNIWGVPERHKNTIAKVKKGDKLLIYIKQENVNGEVKPSRIVAVY 63

Query: 367 EAASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKICD-PLEEDAFRPIL 516
           E AS    +     ++  K  G   FP ++++   KI D P+E   F+P++
Sbjct: 64  ETASEVYRD-SSRIFKSPKGMGNETFPLRIKLKPVKIFDRPIE---FKPLI 110



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>Y875_PYRAB (Q9V0B5) UPF0310 protein PYRAB08750|
          Length = 142

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
 Frame = +1

Query: 211 YIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLYNYSTHQLHGIFEAASFGGA 390
           ++ + N D  +   ++ ++G+P R+ ++++ ++PG  L  Y     +   + E    G  
Sbjct: 4   WLCITNRDNWKVVKEKNVWGVPRRHENTMKRVKPGDKLVFYVKQESRKGEVLEPMIVGIF 63

Query: 391 NIDPAAWEDKKCNGESRFPAQ---VRVATRKICDPLEEDAFRPIL 516
            +    + D     +S  P +   +RV  R I   + E  F+P++
Sbjct: 64  EVVSEPYSDSTKIFKSHTPGETYPIRVKIRPI--KIGEVKFKPLI 106



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>Y1033_PYRHO (O58764) UPF0310 protein PH1033|
          Length = 145

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 23/112 (20%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
 Frame = +1

Query: 211 YIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLY---------NYSTHQLHGI 363
           +I + N +  E   +  ++G+P ++++++  ++PG  L +Y         N    ++ GI
Sbjct: 4   WICITNRENWEVIKRHNVWGVPKKHKNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGI 63

Query: 364 FEAASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKICDPLEEDAFRPILH 519
           +E  S     +D +        G+  +P +V++   KI     E  F+P+++
Sbjct: 64  YEVTS--EPYVDFSRIFKPHRGGKETYPYRVKIKPIKI----GEINFKPLIN 109



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>AROK_XYLFA (Q9PDP4) Shikimate kinase (EC 2.7.1.71) (SK)|
          Length = 180

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +1

Query: 373 ASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKICDPLEEDAFRPILHHYD 528
           A+ GG  +DP   E+++C  E  F   +++      + L  D +RP+L   D
Sbjct: 79  ATGGGTILDP---ENRRCMQERGFVVFLKINVNTQLERLAHDRYRPLLQQID 127


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,566,544
Number of Sequences: 219361
Number of extensions: 910831
Number of successful extensions: 3040
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3039
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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