| Clone Name | baal25p04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U69632.1|TAU69632 Triticum aestivum Cu/Zn superoxide dismutase (SOD1.2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 781 Score = 430 bits (217), Expect = e-117 Identities = 281/301 (93%), Gaps = 1/301 (0%) Strand = Plus / Plus Query: 20 aaaagttcttccgcttccgacgaccgccatggccgcgcagaagcctcctctttgccgccg 79 |||||||||||||||||||| ||| ||||||||||| |||| |||||||||||||||||| Sbjct: 3 aaaagttcttccgcttccgaagacagccatggccgctcaga-gcctcctctttgccgccg 61 Query: 80 ccgcgcctctcttccaggctcctgcctctgcctgccctttccactcgctccgaattgtct 139 |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 62 ccgcgcctctcttccaggctcctgcctctgcccgccctttccagtcgctccgaattgtct 121 Query: 140 ccgccccggcaggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaaga 199 || |||| | |||||| ||||||| | ||||||||||||||| |||||||||||||||| Sbjct: 122 ccaccccaggaggcgccaccgccgccgccagggcgctcgtcgtcgccgacgccaccaaga 181 Query: 200 aggcagtcgcggtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccagg 259 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 182 aggcagtcgcggtgctcaagggctcctcccaggtcgagggcgtcgtcacgctcacccagg 241 Query: 260 acgatgacggtcctacgacagtgaacgttcgtatcactggacttactcctggacttcatg 319 | || |||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 242 aagacgacggtcctacgacggtgaacgttcgtatcactggacttgctcctggacttcatg 301 Query: 320 g 320 | Sbjct: 302 g 302
>gb|U69536.1|TAU69536 Triticum aestivum Cu/Zn superoxide dismutase (SOD1.1) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 883 Score = 428 bits (216), Expect = e-117 Identities = 280/300 (93%), Gaps = 1/300 (0%) Strand = Plus / Plus Query: 21 aaagttcttccgcttccgacgaccgccatggccgcgcagaagcctcctctttgccgccgc 80 |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1 aaagttcttccgctcccgacgaccgccatggccgcgcaga-gcctcctctttgccgccgc 59 Query: 81 cgcgcctctcttccaggctcctgcctctgcctgccctttccactcgctccgaattgtctc 140 ||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 60 cgcgcctctcttccaggttcctgcctctgcccgccctttccagtcgctccgaattgtctc 119 Query: 141 cgccccggcaggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaa 200 | | || | |||||| ||||||| | ||||||||||||||| ||||||||||||||||| Sbjct: 120 cactccaggaggcgccaccgccgccgccagggcgctcgtcgtcgccgacgccaccaagaa 179 Query: 201 ggcagtcgcggtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccagga 260 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 180 ggcagtcgcggtgctcaagggcacctcccaggtcgagggcgtcgtcacgctcacccagga 239 Query: 261 cgatgacggtcctacgacagtgaacgttcgtatcactggacttactcctggacttcatgg 320 || |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 240 agacgacggtcccacgacggtgaacgttcgtatcactggacttgctcctggacttcatgg 299
>ref|XM_507610.1| PREDICTED Oryza sativa (japonica cultivar-group), P0604E01.43 mRNA Length = 992 Score = 192 bits (97), Expect = 5e-46 Identities = 195/227 (85%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 91 ttccaggctcctgcctctgcctgccctttccactcgctccgaattgtctccgccccggca 150 |||||| | ||| |||||||| ||||||||||||||||||| | | | ||| ||| || Sbjct: 136 ttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcg 195 Query: 151 ggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcg 210 ||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 196 ggcgc---cgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgcc 252 Query: 211 gtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccaggacgatgacggt 270 ||||||||||||||||||||||| ||||| |||||||| ||||||||||| || | ||| Sbjct: 253 gtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccaggatgaccaaggt 312 Query: 271 cctacgacagtgaacgttcgtatcactggacttactcctggacttca 317 ||||| |||||||| || ||| | || |||||||||||||||||||| Sbjct: 313 cctacaacagtgaatgtccgtgtgacgggacttactcctggacttca 359
>ref|XM_483791.1| Oryza sativa (japonica cultivar-group), mRNA Length = 863 Score = 192 bits (97), Expect = 5e-46 Identities = 195/227 (85%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 91 ttccaggctcctgcctctgcctgccctttccactcgctccgaattgtctccgccccggca 150 |||||| | ||| |||||||| ||||||||||||||||||| | | | ||| ||| || Sbjct: 140 ttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcg 199 Query: 151 ggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcg 210 ||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 200 ggcgc---cgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgcc 256 Query: 211 gtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccaggacgatgacggt 270 ||||||||||||||||||||||| ||||| |||||||| ||||||||||| || | ||| Sbjct: 257 gtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccaggatgaccaaggt 316 Query: 271 cctacgacagtgaacgttcgtatcactggacttactcctggacttca 317 ||||| |||||||| || ||| | || |||||||||||||||||||| Sbjct: 317 cctacaacagtgaatgtccgtgtgacgggacttactcctggacttca 363
>ref|XM_507609.1| PREDICTED Oryza sativa (japonica cultivar-group), P0604E01.43 mRNA Length = 1026 Score = 192 bits (97), Expect = 5e-46 Identities = 195/227 (85%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 91 ttccaggctcctgcctctgcctgccctttccactcgctccgaattgtctccgccccggca 150 |||||| | ||| |||||||| ||||||||||||||||||| | | | ||| ||| || Sbjct: 156 ttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcg 215 Query: 151 ggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcg 210 ||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 216 ggcgc---cgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgcc 272 Query: 211 gtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccaggacgatgacggt 270 ||||||||||||||||||||||| ||||| |||||||| ||||||||||| || | ||| Sbjct: 273 gtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccaggatgaccaaggt 332 Query: 271 cctacgacagtgaacgttcgtatcactggacttactcctggacttca 317 ||||| |||||||| || ||| | || |||||||||||||||||||| Sbjct: 333 cctacaacagtgaatgtccgtgtgacgggacttactcctggacttca 379
>ref|XM_507341.2| PREDICTED Oryza sativa (japonica cultivar-group), P0604E01.43 mRNA Length = 1038 Score = 192 bits (97), Expect = 5e-46 Identities = 195/227 (85%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 91 ttccaggctcctgcctctgcctgccctttccactcgctccgaattgtctccgccccggca 150 |||||| | ||| |||||||| ||||||||||||||||||| | | | ||| ||| || Sbjct: 156 ttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcg 215 Query: 151 ggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcg 210 ||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 216 ggcgc---cgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgcc 272 Query: 211 gtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccaggacgatgacggt 270 ||||||||||||||||||||||| ||||| |||||||| ||||||||||| || | ||| Sbjct: 273 gtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccaggatgaccaaggt 332 Query: 271 cctacgacagtgaacgttcgtatcactggacttactcctggacttca 317 ||||| |||||||| || ||| | || |||||||||||||||||||| Sbjct: 333 cctacaacagtgaatgtccgtgtgacgggacttactcctggacttca 379
>dbj|AK104240.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B03, full insert sequence Length = 1026 Score = 192 bits (97), Expect = 5e-46 Identities = 195/227 (85%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 91 ttccaggctcctgcctctgcctgccctttccactcgctccgaattgtctccgccccggca 150 |||||| | ||| |||||||| ||||||||||||||||||| | | | ||| ||| || Sbjct: 156 ttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcg 215 Query: 151 ggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcg 210 ||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 216 ggcgc---cgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgcc 272 Query: 211 gtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccaggacgatgacggt 270 ||||||||||||||||||||||| ||||| |||||||| ||||||||||| || | ||| Sbjct: 273 gtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccaggatgaccaaggt 332 Query: 271 cctacgacagtgaacgttcgtatcactggacttactcctggacttca 317 ||||| |||||||| || ||| | || |||||||||||||||||||| Sbjct: 333 cctacaacagtgaatgtccgtgtgacgggacttactcctggacttca 379
>dbj|AK104013.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E03, full insert sequence Length = 992 Score = 192 bits (97), Expect = 5e-46 Identities = 195/227 (85%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 91 ttccaggctcctgcctctgcctgccctttccactcgctccgaattgtctccgccccggca 150 |||||| | ||| |||||||| ||||||||||||||||||| | | | ||| ||| || Sbjct: 136 ttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcg 195 Query: 151 ggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcg 210 ||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 196 ggcgc---cgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgcc 252 Query: 211 gtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccaggacgatgacggt 270 ||||||||||||||||||||||| ||||| |||||||| ||||||||||| || | ||| Sbjct: 253 gtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccaggatgaccaaggt 312 Query: 271 cctacgacagtgaacgttcgtatcactggacttactcctggacttca 317 ||||| |||||||| || ||| | || |||||||||||||||||||| Sbjct: 313 cctacaacagtgaatgtccgtgtgacgggacttactcctggacttca 359
>dbj|AK068627.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154J21, full insert sequence Length = 863 Score = 192 bits (97), Expect = 5e-46 Identities = 195/227 (85%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 91 ttccaggctcctgcctctgcctgccctttccactcgctccgaattgtctccgccccggca 150 |||||| | ||| |||||||| ||||||||||||||||||| | | | ||| ||| || Sbjct: 140 ttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcg 199 Query: 151 ggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcg 210 ||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 200 ggcgc---cgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgcc 256 Query: 211 gtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccaggacgatgacggt 270 ||||||||||||||||||||||| ||||| |||||||| ||||||||||| || | ||| Sbjct: 257 gtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccaggatgaccaaggt 316 Query: 271 cctacgacagtgaacgttcgtatcactggacttactcctggacttca 317 ||||| |||||||| || ||| | || |||||||||||||||||||| Sbjct: 317 cctacaacagtgaatgtccgtgtgacgggacttactcctggacttca 363
>dbj|AK059841.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-D10, full insert sequence Length = 1038 Score = 192 bits (97), Expect = 5e-46 Identities = 195/227 (85%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 91 ttccaggctcctgcctctgcctgccctttccactcgctccgaattgtctccgccccggca 150 |||||| | ||| |||||||| ||||||||||||||||||| | | | ||| ||| || Sbjct: 156 ttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcg 215 Query: 151 ggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcg 210 ||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 216 ggcgc---cgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgcc 272 Query: 211 gtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccaggacgatgacggt 270 ||||||||||||||||||||||| ||||| |||||||| ||||||||||| || | ||| Sbjct: 273 gtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccaggatgaccaaggt 332 Query: 271 cctacgacagtgaacgttcgtatcactggacttactcctggacttca 317 ||||| |||||||| || ||| | || |||||||||||||||||||| Sbjct: 333 cctacaacagtgaatgtccgtgtgacgggacttactcctggacttca 379
>dbj|D85239.1| Oryza sativa (japonica cultivar-group) mRNA for plastidic copper/zinc-superoxide dismutase, complete cds Length = 951 Score = 192 bits (97), Expect = 5e-46 Identities = 195/227 (85%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 91 ttccaggctcctgcctctgcctgccctttccactcgctccgaattgtctccgccccggca 150 |||||| | ||| |||||||| ||||||||||||||||||| | | | ||| ||| || Sbjct: 121 ttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcg 180 Query: 151 ggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcg 210 ||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 181 ggcgc---cgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgcc 237 Query: 211 gtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccaggacgatgacggt 270 ||||||||||||||||||||||| ||||| |||||||| ||||||||||| || | ||| Sbjct: 238 gtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccaggatgaccaaggt 297 Query: 271 cctacgacagtgaacgttcgtatcactggacttactcctggacttca 317 ||||| |||||||| || ||| | || |||||||||||||||||||| Sbjct: 298 cctacaacagtgaatgtccgtgtgacgggacttactcctggacttca 344
>gb|AF385581.2| Dichanthelium lanuginosum copper/zinc superoxide dismutase precursor (SOD1) mRNA, complete cds; nuclear gene for chloroplast product Length = 643 Score = 161 bits (81), Expect = 2e-36 Identities = 135/153 (88%) Strand = Plus / Plus Query: 168 cagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcggtgctcaagggcacctc 227 ||||||||||||| | |||||||||||||||||||| ||||| || ||||||||||| || Sbjct: 157 cagggcgctcgtcctcgccgacgccaccaagaaggccgtcgccgtcctcaagggcacgtc 216 Query: 228 ccaggtcgagggcgtcgtcacactcacccaggacgatgacggtcctacgacagtgaacgt 287 | ||||||||||||||||||| ||||| ||||| || ||||| ||||| ||||| | ||| Sbjct: 217 cgaggtcgagggcgtcgtcacgctcacgcaggaggacgacggacctaccacagtcagcgt 276 Query: 288 tcgtatcactggacttactcctggacttcatgg 320 ||| | |||||||||||||||||||||||||| Sbjct: 277 ccgtgttactggacttactcctggacttcatgg 309
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 159 bits (80), Expect = 7e-36 Identities = 148/170 (87%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 91 ttccaggctcctgcctctgcctgccctttccactcgctccgaattgtctccgccccggca 150 |||||| | ||| |||||||| ||||||||||||||||||| | | | ||| ||| || Sbjct: 28125382 ttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcg 28125441 Query: 151 ggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcg 210 ||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 28125442 ggcgc---cgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgcc 28125498 Query: 211 gtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccagga 260 ||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 28125499 gtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccagga 28125548 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcctggacttca 317 |||||||| |||||||| || ||| | || |||||||||||||||||||| Sbjct: 28125985 ggtcctacaacagtgaatgtccgtgtgacgggacttactcctggacttca 28126034
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 159 bits (80), Expect = 7e-36 Identities = 148/170 (87%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 91 ttccaggctcctgcctctgcctgccctttccactcgctccgaattgtctccgccccggca 150 |||||| | ||| |||||||| ||||||||||||||||||| | | | ||| ||| || Sbjct: 122877 ttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcg 122936 Query: 151 ggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcg 210 ||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 122937 ggcgc---cgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgcc 122993 Query: 211 gtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccagga 260 ||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 122994 gtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccagga 123043 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcctggacttca 317 |||||||| |||||||| || ||| | || |||||||||||||||||||| Sbjct: 123480 ggtcctacaacagtgaatgtccgtgtgacgggacttactcctggacttca 123529
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 159 bits (80), Expect = 7e-36 Identities = 148/170 (87%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 91 ttccaggctcctgcctctgcctgccctttccactcgctccgaattgtctccgccccggca 150 |||||| | ||| |||||||| ||||||||||||||||||| | | | ||| ||| || Sbjct: 8855 ttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcg 8914 Query: 151 ggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcg 210 ||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 8915 ggcgc---cgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgcc 8971 Query: 211 gtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccagga 260 ||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 8972 gtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccagga 9021 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcctggacttca 317 |||||||| |||||||| || ||| | || |||||||||||||||||||| Sbjct: 9458 ggtcctacaacagtgaatgtccgtgtgacgggacttactcctggacttca 9507
>dbj|AB026724.1| Oryza sativa (japonica cultivar-group) sodCp gene for copper/zinc superoxide dismutase, complete cds Length = 4297 Score = 159 bits (80), Expect = 7e-36 Identities = 148/170 (87%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 91 ttccaggctcctgcctctgcctgccctttccactcgctccgaattgtctccgccccggca 150 |||||| | ||| |||||||| ||||||||||||||||||| | | | ||| ||| || Sbjct: 1406 ttccagtccccttcctctgcccgccctttccactcgctccgcctcgccgccggccccgcg 1465 Query: 151 ggcgcggccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcg 210 ||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1466 ggcgc---cgccgctgccagggcgctcgtcgtcgccgacgccaccaagaaggccgtcgcc 1522 Query: 211 gtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccagga 260 ||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 1523 gtgctcaagggcacctcccaggttgagggagtcgtcaccctcacccagga 1572 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcctggacttca 317 |||||||| |||||||| || ||| | || |||||||||||||||||||| Sbjct: 2008 ggtcctacaacagtgaatgtccgtgtgacgggacttactcctggacttca 2057
>gb|BT018046.1| Zea mays clone EL01N0531C02.c mRNA sequence Length = 969 Score = 135 bits (68), Expect = 1e-28 Identities = 140/164 (85%) Strand = Plus / Plus Query: 157 gccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcggtgctc 216 |||||||| | ||||||||||||||| || |||||||| |||||||| || || || ||| Sbjct: 169 gccgccgccgccagggcgctcgtcgtcgcggacgccactaagaaggccgtagccgtcctc 228 Query: 217 aagggcacctcccaggtcgagggcgtcgtcacactcacccaggacgatgacggtcctacg 276 |||||| | || ||||||||||||| ||||| ||||| |||||||| || || ||||| Sbjct: 229 aagggcgcgtctgaggtcgagggcgtggtcacgctcacgcaggacgacgatggacctaca 288 Query: 277 acagtgaacgttcgtatcactggacttactcctggacttcatgg 320 || ||||| || ||||||||||||||||| |||||||||||||| Sbjct: 289 actgtgaatgtccgtatcactggacttacccctggacttcatgg 332
>gb|AY108035.1| Zea mays PCO095461 mRNA sequence Length = 968 Score = 135 bits (68), Expect = 1e-28 Identities = 140/164 (85%) Strand = Plus / Plus Query: 157 gccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcggtgctc 216 |||||||| | ||||||||||||||| || |||||||| |||||||| || || || ||| Sbjct: 178 gccgccgccgccagggcgctcgtcgtcgcggacgccactaagaaggccgtagccgtcctc 237 Query: 217 aagggcacctcccaggtcgagggcgtcgtcacactcacccaggacgatgacggtcctacg 276 |||||| | || ||||||||||||| ||||| ||||| |||||||| || || ||||| Sbjct: 238 aagggcgcgtctgaggtcgagggcgtggtcacgctcacgcaggacgacgatggacctaca 297 Query: 277 acagtgaacgttcgtatcactggacttactcctggacttcatgg 320 || ||||| || ||||||||||||||||| |||||||||||||| Sbjct: 298 actgtgaatgtccgtatcactggacttacccctggacttcatgg 341
>gb|AF054151.1|AF054151 Zantedeschia aethiopica Cu/Zn-superoxide dismutase precursor (sod4) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1246 Score = 103 bits (52), Expect = 3e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 193 accaagaaggcagtcgcggtgctcaagggcacctcccaggtcgagggcgtcgtcacactc 252 ||||||||||| ||||| || ||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 190 accaagaaggccgtcgccgtcctcaagggcacttcccaggtcgacggcgtcgtcacgctc 249 Query: 253 acccaggacgatgacggtcctacgacagtgaacgttcgtatcac 296 |||||| || |||||||| ||||| ||||| ||||||||||| Sbjct: 250 gtccaggaagacgacggtcccacgacggtgaatgttcgtatcac 293
>gb|AY881156.1| Nelumbo nucifera isolate 5 copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 85.7 bits (43), Expect = 8e-14 Identities = 103/123 (83%) Strand = Plus / Plus Query: 198 gaaggcagtcgcggtgctcaagggcacctcccaggtcgagggcgtcgtcacactcaccca 257 |||||||||||| |||||||| || | ||||| | ||| |||||||||| | | ||||| Sbjct: 7 gaaggcagtcgccgtgctcaaaggaaattcccaagccgaaggcgtcgtcatattgaccca 66 Query: 258 ggacgatgacggtcctacgacagtgaacgttcgtatcactggacttactcctggacttca 317 || || |||||||| ||||| ||||| |||||| |||| |||||||||||||||| ||| Sbjct: 67 agaagacgacggtccgacgactgtgaatgttcgtgtcaccggacttactcctggacctca 126 Query: 318 tgg 320 ||| Sbjct: 127 tgg 129
>emb|X56435.1|PSSODII Pea mRNA for Cu/Zn superoxide dismutase II (SOD9) Length = 901 Score = 83.8 bits (42), Expect = 3e-13 Identities = 108/130 (83%) Strand = Plus / Plus Query: 194 ccaagaaggcagtcgcggtgctcaagggcacctcccaggtcgagggcgtcgtcacactca 253 ||||||| || ||||| || || |||||||| ||| ||||| || |||||||| |||| Sbjct: 182 ccaagaaagccgtcgctgtccttaagggcacatccgccgtcgaaggtgtcgtcactctca 241 Query: 254 cccaggacgatgacggtcctacgacagtgaacgttcgtatcactggacttactcctggac 313 | || |||||||| ||||| || ||||| || |||||||||||||| |||||||| || | Sbjct: 242 ctcaagacgatgaaggtccaacaacagttaatgttcgtatcactggccttactccagggc 301 Query: 314 ttcatggttt 323 |||||||||| Sbjct: 302 ttcatggttt 311
>gb|AY898945.1| Lilium hybrid cultivar superoxide dismutase (SOD) mRNA, complete cds Length = 872 Score = 83.8 bits (42), Expect = 3e-13 Identities = 102/122 (83%) Strand = Plus / Plus Query: 199 aaggcagtcgcggtgctcaagggcacctcccaggtcgagggcgtcgtcacactcacccag 258 ||||| ||||| || || ||||| | |||||||||||||||||||||||| || | |||| Sbjct: 234 aaggccgtcgccgtcctgaagggtaactcccaggtcgagggcgtcgtcacgctgatccag 293 Query: 259 gacgatgacggtcctacgacagtgaacgttcgtatcactggacttactcctggacttcat 318 |||||||| |||||||| | ||| | |||||| | |||||||||| ||||||| |||| Sbjct: 294 gacgatgatggtcctacaaaggtgcaagttcgtgttactggacttaaccctggacctcat 353 Query: 319 gg 320 || Sbjct: 354 gg 355
>gb|AC091735.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0082N11, from chromosome 10, complete sequence Length = 183345 Score = 81.8 bits (41), Expect = 1e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 157 gccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcggtgctc 216 |||||||||| ||||||||||||||| ||||| |||||||||||||| ||||| || ||| Sbjct: 11995 gccgccgctgccagggcgctcgtcgtcgccgatgccaccaagaaggccgtcgccgtactc 12054 Query: 217 aagggcacctccc 229 || |||||||||| Sbjct: 12055 aa-ggcacctccc 12066
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 81.8 bits (41), Expect = 1e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 157 gccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcggtgctc 216 |||||||||| ||||||||||||||| ||||| |||||||||||||| ||||| || ||| Sbjct: 7378131 gccgccgctgccagggcgctcgtcgtcgccgatgccaccaagaaggccgtcgccgtactc 7378190 Query: 217 aagggcacctccc 229 || |||||||||| Sbjct: 7378191 aa-ggcacctccc 7378202 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 gccgccgccgcgcctctcttccaggctc 100 ||||||||||||||||||| | |||||| Sbjct: 22551176 gccgccgccgcgcctctctccaaggctc 22551149
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 81.8 bits (41), Expect = 1e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 157 gccgccgctgtcagggcgctcgtcgtggccgacgccaccaagaaggcagtcgcggtgctc 216 |||||||||| ||||||||||||||| ||||| |||||||||||||| ||||| || ||| Sbjct: 7382330 gccgccgctgccagggcgctcgtcgtcgccgatgccaccaagaaggccgtcgccgtactc 7382389 Query: 217 aagggcacctccc 229 || |||||||||| Sbjct: 7382390 aa-ggcacctccc 7382401 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 gccgccgccgcgcctctcttccaggctc 100 ||||||||||||||||||| | |||||| Sbjct: 22563644 gccgccgccgcgcctctctccaaggctc 22563617
>gb|J04087.1|PEASOD Pea chloroplastic copper/zinc-superoxide dismutase mRNA, complete cds Length = 825 Score = 79.8 bits (40), Expect = 5e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 232 gtcgagggcgtcgtcacactcacccaggacgatgacggtcctacgacagtgaacgttcgt 291 ||||| || |||||||| ||||| || |||||||| ||||| || ||||| || |||||| Sbjct: 197 gtcgaaggtgtcgtcactctcactcaagacgatgaaggtccaacaacagttaatgttcgt 256 Query: 292 atcactggacttactcctggacttcatggttt 323 |||||||| |||||||| || ||||||||||| Sbjct: 257 atcactggccttactccagggcttcatggttt 288
>dbj|AB066500.1| Barbula unguiculata mRNA for chloroplastic copper/zinc superoxide dismutase, complete cds Length = 946 Score = 73.8 bits (37), Expect = 3e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 189 cgccaccaagaaggcagtcgcggtgctcaagggcacctcccaggtcgagggcgtcgtcac 248 ||||||||||||||| || || |||||||||||||| ||| | ||||||||||||||||| Sbjct: 275 cgccaccaagaaggccgtggccgtgctcaagggcacttccaatgtcgagggcgtcgtcac 334 Query: 249 actcacccaggacgatgacggtcctacga 277 ||| |||||| || || ||||| |||| Sbjct: 335 gctcctccaggaagacgatggtccgacga 363
>gb|DQ223864.1| Nelumbo nucifera copper-zinc superoxide dismutase (SOD) mRNA, complete cds Length = 461 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 238 ggcgtcgtcacactcacccaggacgatgacggtcctacgacagtgaacgttcgtatcact 297 |||||||||| | | ||||| || || |||||||| ||||| ||||| |||||| |||| Sbjct: 47 ggcgtcgtcatattgacccaagaagacgacggtccgacgactgtgaatgttcgtgtcacc 106 Query: 298 ggacttactcctggacttcatgg 320 |||||||||||||||| |||||| Sbjct: 107 ggacttactcctggacctcatgg 129
>gb|AY881161.1| Nelumbo nucifera isolate 10 copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 238 ggcgtcgtcacactcacccaggacgatgacggtcctacgacagtgaacgttcgtatcact 297 |||||||||| | | ||||| || || |||||||| ||||| ||||| |||||| |||| Sbjct: 47 ggcgtcgtcatattgacccaagaagacgacggtccgacgactgtgaatgttcgtgtcacc 106 Query: 298 ggacttactcctggacttcatgg 320 |||||||||||||||| |||||| Sbjct: 107 ggacttactcctggacctcatgg 129
>gb|AY881160.1| Nelumbo nucifera isolate 9 copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 238 ggcgtcgtcacactcacccaggacgatgacggtcctacgacagtgaacgttcgtatcact 297 |||||||||| | | ||||| || || |||||||| ||||| ||||| |||||| |||| Sbjct: 47 ggcgtcgtcatattgacccaagaagacgacggtccgacgactgtgaatgttcgtgtcacc 106 Query: 298 ggacttactcctggacttcatgg 320 |||||||||||||||| |||||| Sbjct: 107 ggacttactcctggacctcatgg 129
>gb|AY881159.1| Nelumbo nucifera isolate 8(2) copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 238 ggcgtcgtcacactcacccaggacgatgacggtcctacgacagtgaacgttcgtatcact 297 |||||||||| | | ||||| || || |||||||| ||||| ||||| |||||| |||| Sbjct: 47 ggcgtcgtcatattgacccaagaagacgacggtccgacgactgtgaatgttcgtgtcacc 106 Query: 298 ggacttactcctggacttcatgg 320 |||||||||||||||| |||||| Sbjct: 107 ggacttactcctggacctcatgg 129
>gb|AY881158.1| Nelumbo nucifera isolate 8 copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 238 ggcgtcgtcacactcacccaggacgatgacggtcctacgacagtgaacgttcgtatcact 297 |||||||||| | | ||||| || || |||||||| ||||| ||||| |||||| |||| Sbjct: 47 ggcgtcgtcatattgacccaagaagacgacggtccgacgactgtgaatgttcgtgtcacc 106 Query: 298 ggacttactcctggacttcatgg 320 |||||||||||||||| |||||| Sbjct: 107 ggacttactcctggacctcatgg 129
>gb|AY881157.1| Nelumbo nucifera isolate 6 copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 238 ggcgtcgtcacactcacccaggacgatgacggtcctacgacagtgaacgttcgtatcact 297 |||||||||| | | ||||| || || |||||||| ||||| ||||| |||||| |||| Sbjct: 47 ggcgtcgtcatattgacccaagaagacgacggtccgacgactgtgaatgttcgtgtcacc 106 Query: 298 ggacttactcctggacttcatgg 320 |||||||||||||||| |||||| Sbjct: 107 ggacttactcctggacctcatgg 129
>gb|AY881154.1| Nelumbo nucifera isolate 3 copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 238 ggcgtcgtcacactcacccaggacgatgacggtcctacgacagtgaacgttcgtatcact 297 |||||||||| | | ||||| || || |||||||| ||||| ||||| |||||| |||| Sbjct: 47 ggcgtcgtcatattgacccaagaagacgacggtccgacgactgtgaatgttcgtgtcacc 106 Query: 298 ggacttactcctggacttcatgg 320 |||||||||||||||| |||||| Sbjct: 107 ggacttactcctggacctcatgg 129
>gb|AY881153.1| Nelumbo nucifera isolate 1 copper-zinc superoxide dismutase mRNA, partial cds Length = 457 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 238 ggcgtcgtcacactcacccaggacgatgacggtcctacgacagtgaacgttcgtatcact 297 |||||||||| | | ||||| || || |||||||| ||||| ||||| |||||| |||| Sbjct: 47 ggcgtcgtcatattgacccaagaagacgacggtccgacgactgtgaatgttcgtgtcacc 106 Query: 298 ggacttactcctggacttcatgg 320 |||||||||||||||| |||||| Sbjct: 107 ggacttactcctggacctcatgg 129
>emb|X14352.1|PHSOD Petunia mRNA for chloroplast superoxide dismutase (SOD) (EC 1.15.1.1) Length = 937 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 262 gatgacggtcctacgacagtgaacgttcgtatcactggacttactcctggacttcatgg 320 ||||| ||||| || || ||||| |||||||| ||||||||| |||||||||||||||| Sbjct: 331 gatgatggtccaaccactgtgaaagttcgtataactggacttgctcctggacttcatgg 389
>gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete sequence Length = 106747 Score = 56.0 bits (28), Expect = 7e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcctggacttcatggttt 323 ||||| || ||||| || |||||||||||||| |||||||| || ||||||||||| Sbjct: 51438 ggtccaacaacagttaatgttcgtatcactggccttactccagggcttcatggttt 51383
>emb|AJ278668.1|PTR278668 Populus tremula x Populus tremuloides chloroplast mRNA for putative CuZn-superoxide dismutase (cp-SOD 1 gene) Length = 1029 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 238 ggcgtcgtcacactcacccaggacgatgacggtcctacgacagtgaacgttcgtatcact 297 ||||||||||| | ||||||| || || |||||||| |||||||| |||||||| ||| Sbjct: 234 ggcgtcgtcactttgtcccaggaagacgatggtcctacaacagtgaatgttcgtattact 293 Query: 298 ggacttactcc 308 || |||||||| Sbjct: 294 gggcttactcc 304
>gb|AF056621.1|AF056621 Medicago sativa putative Cu/Zn superoxide dismutase precursor, mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 900 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 277 acagtgaacgttcgtatcactggacttactcctggacttcatggttt 323 ||||| || |||||||||||||| |||||||| || ||||||||||| Sbjct: 285 acagtcaatgttcgtatcactggccttactccagggcttcatggttt 331
>emb|Z54272.1|HSL228A7 Human DNA sequence from clone LA04NC01-228A7 on chromosome 4, complete sequence Length = 14812 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 96 ggctcctgcctctgcctgccctttc 120 ||||||||||||||||||||||||| Sbjct: 6814 ggctcctgcctctgcctgccctttc 6838
>emb|AL109760.3|HSJ513G18 Human DNA sequence from clone RP3-513G18 on chromosome 4, complete sequence Length = 112560 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 96 ggctcctgcctctgcctgccctttc 120 ||||||||||||||||||||||||| Sbjct: 2897 ggctcctgcctctgcctgccctttc 2921
>gb|BT012694.1| Lycopersicon esculentum clone 113564F, mRNA sequence Length = 1048 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Plus Query: 286 gttcgtatcactggacttactcctggacttca 317 |||||||| ||||||||| ||||||||||||| Sbjct: 333 gttcgtataactggacttgctcctggacttca 364
>gb|DQ088819.1| Gossypium hirsutum chloroplast Cu/ZnSOD mRNA, complete cds; nuclear gene for chloroplast product Length = 762 Score = 48.1 bits (24), Expect = 0.017 Identities = 57/68 (83%) Strand = Plus / Plus Query: 253 acccaggacgatgacggtcctacgacagtgaacgttcgtatcactggacttactcctgga 312 |||||||| |||| |||||||| || ||||| ||||| || ||||| ||||||||||| Sbjct: 361 acccaggaaaatgatggtcctacaactgtgaatgttcgaattactggtcttactcctggg 420 Query: 313 cttcatgg 320 | |||||| Sbjct: 421 cctcatgg 428
>gb|AF527880.1| Lycopersicon esculentum superoxidase dismutase mRNA, complete cds Length = 963 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Plus Query: 286 gttcgtatcactggacttactcctggacttca 317 |||||||| ||||||||| ||||||||||||| Sbjct: 310 gttcgtataactggacttgctcctggacttca 341
>gb|DQ120514.1| Gossypium hirsutum chloroplast Cu/Zn superoxide dismutase mRNA, complete cds; nuclear gene for chloroplast product Length = 1043 Score = 48.1 bits (24), Expect = 0.017 Identities = 57/68 (83%) Strand = Plus / Plus Query: 253 acccaggacgatgacggtcctacgacagtgaacgttcgtatcactggacttactcctgga 312 |||||||| |||| |||||||| || ||||| ||||| || ||||| ||||||||||| Sbjct: 344 acccaggaaaatgatggtcctacaactgtgaatgttcgaattactggtcttactcctggg 403 Query: 313 cttcatgg 320 | |||||| Sbjct: 404 cctcatgg 411
>emb|X14041.1|LECHSOD Tomato mRNA for chloroplast Cu-Zn superoxide dismutase (SOD) Length = 1033 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Plus Query: 286 gttcgtatcactggacttactcctggacttca 317 |||||||| ||||||||| ||||||||||||| Sbjct: 317 gttcgtataactggacttgctcctggacttca 348
>emb|X77175.1|LESOD1 L.esculentum (cherry tomato) SOD Cp;Le:1 gene (part 1) Length = 3676 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Plus Query: 286 gttcgtatcactggacttactcctggacttca 317 |||||||| ||||||||| ||||||||||||| Sbjct: 1825 gttcgtataactggacttgctcctggacttca 1856
>gb|M37151.1|TOMSODB Tomato superoxide dismutase (SOD) mRNA, complete cds Length = 1034 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Plus Query: 286 gttcgtatcactggacttactcctggacttca 317 |||||||| ||||||||| ||||||||||||| Sbjct: 317 gttcgtataactggacttgctcctggacttca 348
>dbj|AB061860.1| Streptomyces griseus orf1, orf2, orf3, dasR, dasA, dasB, dasC, orf8 genes, partial and complete cds Length = 8741 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Plus Query: 180 cgtggccgacgccaccaagaaggc 203 |||||||||||||||||||||||| Sbjct: 5455 cgtggccgacgccaccaagaaggc 5478
>gb|AC006600.4|AC006600 Homo sapiens chromosome 17, clone hRPK.502_F_1, complete sequence Length = 170453 Score = 46.1 bits (23), Expect = 0.069 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 caccaccaccaccaacccaaaaa 23 ||||||||||||||||||||||| Sbjct: 13528 caccaccaccaccaacccaaaaa 13550
>emb|AL596246.10| Mouse DNA sequence from clone RP23-186E14 on chromosome 11, complete sequence Length = 144136 Score = 46.1 bits (23), Expect = 0.069 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 caccaccaccaccaacccaaaaa 23 ||||||||||||||||||||||| Sbjct: 1163 caccaccaccaccaacccaaaaa 1141
>emb|AL645524.8| Mouse DNA sequence from clone RP23-35D7 on chromosome 11, complete sequence Length = 210163 Score = 46.1 bits (23), Expect = 0.069 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 caccaccaccaccaacccaaaaa 23 ||||||||||||||||||||||| Sbjct: 209326 caccaccaccaccaacccaaaaa 209304
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 tcgtcgtggccgacgccaccaa 197 |||||||||||||||||||||| Sbjct: 2692282 tcgtcgtggccgacgccaccaa 2692261
>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13 Length = 348247 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 tcgtcgtggccgacgccaccaa 197 |||||||||||||||||||||| Sbjct: 270112 tcgtcgtggccgacgccaccaa 270091
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 tcgtcgtggccgacgccaccaa 197 |||||||||||||||||||||| Sbjct: 152020 tcgtcgtggccgacgccaccaa 151999
>dbj|AP002806.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-721F8, complete sequence Length = 161871 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 cttccaggctcctgcctctgcc 111 |||||||||||||||||||||| Sbjct: 96969 cttccaggctcctgcctctgcc 96948
>dbj|AP003440.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-682A1, complete sequence Length = 90492 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 gctcctgcctctgcctgccctt 118 |||||||||||||||||||||| Sbjct: 79518 gctcctgcctctgcctgccctt 79497
>dbj|AP000463.2| Homo sapiens genomic DNA, chromosome 11q clone:P198, complete sequences Length = 87523 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 gctcctgcctctgcctgccctt 118 |||||||||||||||||||||| Sbjct: 49296 gctcctgcctctgcctgccctt 49275
>gb|AD000010.1|MSGY222 Mycobacterium tuberculosis sequence from clone y222 Length = 41156 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 tcgtcgtggccgacgccaccaa 197 |||||||||||||||||||||| Sbjct: 39098 tcgtcgtggccgacgccaccaa 39077
>dbj|AB017653.1| Homo sapiens genomic DNA, chromosome 11q23.2, clone:P198, complete sequence Length = 87523 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 gctcctgcctctgcctgccctt 118 |||||||||||||||||||||| Sbjct: 38228 gctcctgcctctgcctgccctt 38249
>ref|NM_128379.2| Arabidopsis thaliana CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2); copper, zinc superoxide dismutase AT2G28190 (CSD2) mRNA, complete cds Length = 937 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcc 308 |||||||| || ||||| |||||||||||||| || ||||| Sbjct: 311 ggtcctacaactgtgaatgttcgtatcactggtctcactcc 351
>emb|AL133387.8| Human DNA sequence from clone RP11-107I14 on chromosome 10 Contains the 3' end of a novel gene, three novel genes (FLJ34886), the 5' end of the BTRC gene for beta-transducin repeat containing and four CpG islands, complete sequence Length = 157912 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tctcttccaggctcctgcctctgcc 111 ||||||||||||||| ||||||||| Sbjct: 39003 tctcttccaggctccagcctctgcc 38979
>gb|AY133756.1| Arabidopsis thaliana clone U18350 putative copper/zinc superoxide dismutase (At2g28190) mRNA, complete cds Length = 682 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcc 308 |||||||| || ||||| |||||||||||||| || ||||| Sbjct: 265 ggtcctacaactgtgaatgttcgtatcactggtctcactcc 305
>gb|AY064050.1| Arabidopsis thaliana putative copper/zinc superoxide dismutase (At2g28190) mRNA, complete cds Length = 939 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcc 308 |||||||| || ||||| |||||||||||||| || ||||| Sbjct: 311 ggtcctacaactgtgaatgttcgtatcactggtctcactcc 351
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 ggccgacgccaccaagaaggc 203 ||||||||||||||||||||| Sbjct: 108704 ggccgacgccaccaagaaggc 108724
>emb|AJ238521.1|ATH238521 Arabidopsis thaliana csd2 gene, exons 1-8, ecotype Ler Length = 1756 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcc 308 |||||||| || ||||| |||||||||||||| || ||||| Sbjct: 685 ggtcctacaactgtgaatgttcgtatcactggtctcactcc 725
>gb|AC005851.3| Arabidopsis thaliana chromosome 2 clone F24D13 map B68, complete sequence Length = 91261 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcc 308 |||||||| || ||||| |||||||||||||| || ||||| Sbjct: 9993 ggtcctacaactgtgaatgttcgtatcactggtctcactcc 9953
>gb|AC136767.6| Homo sapiens chromosome 11, clone RP13-25N22, complete sequence Length = 76050 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 ggcacctcccaggtcgagggc 240 ||||||||||||||||||||| Sbjct: 2341 ggcacctcccaggtcgagggc 2321
>emb|BX821430.1|CNS0AA96 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL41ZA11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcc 308 |||||||| || ||||| |||||||||||||| || ||||| Sbjct: 32 ggtcctacaactgtgaatgttcgtatcactggtctcactcc 72
>emb|BX819296.1|CNS0AA8Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZF01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 898 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcc 308 |||||||| || ||||| |||||||||||||| || ||||| Sbjct: 300 ggtcctacaactgtgaatgttcgtatcactggtctcactcc 340
>emb|BX821096.1|CNS0AA4R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL14ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 809 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcc 308 |||||||| || ||||| |||||||||||||| || ||||| Sbjct: 274 ggtcctacaactgtgaatgttcgtatcactggtctcactcc 314
>gb|AC103791.17| Homo sapiens chromosome 11, clone CTD-2026O3, complete sequence Length = 66781 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 ggcacctcccaggtcgagggc 240 ||||||||||||||||||||| Sbjct: 28839 ggcacctcccaggtcgagggc 28859
>gb|AC154172.4| Mus musculus BAC clone RP23-429K7 from chromosome 18, complete sequence Length = 209529 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 accaccaccaccaacccaaaa 22 ||||||||||||||||||||| Sbjct: 62725 accaccaccaccaacccaaaa 62705
>gb|AY087944.1| Arabidopsis thaliana clone 39796 mRNA, complete sequence Length = 939 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcc 308 |||||||| || ||||| |||||||||||||| || ||||| Sbjct: 313 ggtcctacaactgtgaatgttcgtatcactggtctcactcc 353
>gb|AC091196.6| Homo sapiens chromosome 11, clone RP11-371C18, complete sequence Length = 132211 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 ggcacctcccaggtcgagggc 240 ||||||||||||||||||||| Sbjct: 123951 ggcacctcccaggtcgagggc 123931
>dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP13-25N22, complete sequence Length = 190267 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 ggcacctcccaggtcgagggc 240 ||||||||||||||||||||| Sbjct: 10618 ggcacctcccaggtcgagggc 10598
>gb|AF061519.1|AF061519 Arabidopsis thaliana copper/zinc superoxide dismutase (CSD2) mRNA, nuclear gene encoding plastid protein, complete cds Length = 850 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcc 308 |||||||| || ||||| |||||||||||||| || ||||| Sbjct: 311 ggtcctacaactgtgaatgttcgtatcactggtctcactcc 351
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 ggcgctcgtcgtggccgacgc 191 ||||||||||||||||||||| Sbjct: 952776 ggcgctcgtcgtggccgacgc 952796
>dbj|D10244.1|SPICZD Spinacia oleracea mRNA for copper/zinc-superoxide dismutase, complete cds Length = 923 Score = 42.1 bits (21), Expect = 1.1 Identities = 63/77 (81%) Strand = Plus / Plus Query: 235 gagggcgtcgtcacactcacccaggacgatgacggtcctacgacagtgaacgttcgtatc 294 |||||||||||||| | ||||| || ||||| ||||| || ||||| || || ||||| Sbjct: 254 gagggcgtcgtcactttgacccaagaagatgatggtccaactacagtcaatgtccgtatt 313 Query: 295 actggacttactcctgg 311 | ||||||| ||||||| Sbjct: 314 agtggacttgctcctgg 330
>ref|NM_102585.2| Arabidopsis thaliana FIP1 (FH INTERACTING PROTEIN 1) AT1G28200 (FIP1) mRNA, complete cds Length = 1094 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gccgacgccaccaagaaggc 203 |||||||||||||||||||| Sbjct: 343 gccgacgccaccaagaaggc 362
>gb|AC165074.2| Mus musculus BAC clone RP24-501F1 from chromosome 12, complete sequence Length = 166016 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 caccaccaccaccaacccaa 20 |||||||||||||||||||| Sbjct: 138008 caccaccaccaccaacccaa 137989
>ref|NM_197901.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0056G17.1), mRNA Length = 2588 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 73 gccgccgccgcgcctctcttccaggctc 100 ||||||||||||||||||| | |||||| Sbjct: 96 gccgccgccgcgcctctctccaaggctc 123
>gb|AC170163.1| Homo sapiens chromosome 1 clone WI2-3014I21, complete sequence Length = 40554 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 caggctcctgcctctgcctg 113 |||||||||||||||||||| Sbjct: 38787 caggctcctgcctctgcctg 38806
>gb|AC150278.1| Pan troglodytes BAC clone CH251-126G17 from Y, complete sequence Length = 171976 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tccaggctcctgcctctgcc 111 |||||||||||||||||||| Sbjct: 152599 tccaggctcctgcctctgcc 152618
>gb|AC147478.2| Pan troglodytes BAC clone CH251-571L4 from Y, complete sequence Length = 188138 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tccaggctcctgcctctgcc 111 |||||||||||||||||||| Sbjct: 156184 tccaggctcctgcctctgcc 156165
>gb|AC151982.4| Mus musculus BAC clone RP23-445J16 from chromosome 12, complete sequence Length = 183898 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 caccaccaccaccaacccaa 20 |||||||||||||||||||| Sbjct: 166286 caccaccaccaccaacccaa 166305
>gb|AC068663.5| Mus musculus strain C57BL6/J chromosome 5 clone RP23-280D18, complete sequence Length = 221134 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 caccaccaccaccaacccaaaaag 24 |||||||||||||| ||||||||| Sbjct: 150151 caccaccaccaccatcccaaaaag 150174
>emb|CR392011.17| Zebrafish DNA sequence from clone DKEY-272L17 in linkage group 17, complete sequence Length = 88745 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 caccaccaccaccaacccaaaaag 24 |||||||||||||| ||||||||| Sbjct: 51139 caccaccaccaccaccccaaaaag 51116
>gb|AC133100.5| Mus musculus BAC clone RP23-98O11 from chromosome 19, complete sequence Length = 204855 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 caccaccaccaccaacccaaaaag 24 ||||||||||||||| |||||||| Sbjct: 30571 caccaccaccaccaaaccaaaaag 30548
>gb|AC021044.5| Arabidopsis thaliana chromosome I BAC F3H9 genomic sequence, complete sequence Length = 121720 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gccgacgccaccaagaaggc 203 |||||||||||||||||||| Sbjct: 93129 gccgacgccaccaagaaggc 93148
>gb|AY434497.1| Trifolium pratense superoxide dismutase mRNA, complete cds; nuclear gene for chloroplast product Length = 1016 Score = 40.1 bits (20), Expect = 4.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 268 ggtcctacgacagtgaacgttcgtatcactggacttactcctggacttcatggttt 323 ||||| || ||||| || ||||| ||||| || |||||||| || ||||||||||| Sbjct: 303 ggtccaacaacagttaatgttcgaatcaccggccttactccagggcttcatggttt 358
>gb|AC113541.10| Mus musculus chromosome 5, clone RP23-185N2, complete sequence Length = 210222 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 caccaccaccaccaacccaaaaag 24 |||||||||||||| ||||||||| Sbjct: 47227 caccaccaccaccatcccaaaaag 47204
>gb|AC165955.3| Mus musculus BAC clone RP23-458A8 from chromosome 7, complete sequence Length = 203253 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 caccaccaccaccaacccaa 20 |||||||||||||||||||| Sbjct: 52982 caccaccaccaccaacccaa 53001
>gb|AC148981.7| Mus musculus BAC clone RP23-201L15 from chromosome 7, complete sequence Length = 223522 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 caccaccaccaccaacccaa 20 |||||||||||||||||||| Sbjct: 5427 caccaccaccaccaacccaa 5446
>gb|AC112163.7| Mus Musculus chromosome 13 BAC, clone MGS1-437011 ES cell line, Complete Sequence, complete sequence Length = 159042 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gcagaagcctcctctttgcc 75 |||||||||||||||||||| Sbjct: 114289 gcagaagcctcctctttgcc 114308
>gb|AY059137.1| Arabidopsis thaliana putative FH protein interacting protein FIP1 (At1g28200) mRNA, complete cds Length = 811 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gccgacgccaccaagaaggc 203 |||||||||||||||||||| Sbjct: 277 gccgacgccaccaagaaggc 296
>gb|AF370177.1| Arabidopsis thaliana putative FH protein interacting protein FIP1 (At1g28200) mRNA, complete cds Length = 1034 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gccgacgccaccaagaaggc 203 |||||||||||||||||||| Sbjct: 343 gccgacgccaccaagaaggc 362
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 gccgacgccaccaagaaggc 203 |||||||||||||||||||| Sbjct: 100028 gccgacgccaccaagaaggc 100009
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gccccggcaggcgcggccgc 161 |||||||||||||||||||| Sbjct: 171756 gccccggcaggcgcggccgc 171737
>gb|AC105133.6| Homo sapiens chromosome 15, clone CTD-2071N1, complete sequence Length = 115519 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tccaggctcctgcctctgcc 111 |||||||||||||||||||| Sbjct: 10792 tccaggctcctgcctctgcc 10811
>gb|DQ397580.1| Cenarchaeum symbiosum clone C18D02, complete sequence Length = 38412 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gccccggcaggcgcggccgc 161 |||||||||||||||||||| Sbjct: 24361 gccccggcaggcgcggccgc 24342
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 gccgacgccaccaagaaggc 203 |||||||||||||||||||| Sbjct: 3988201 gccgacgccaccaagaaggc 3988182
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tccaggctcctgcctctgcc 111 |||||||||||||||||||| Sbjct: 5789452 tccaggctcctgcctctgcc 5789433
>emb|CR589921.2| Human DNA sequence from clone WI2-3371A20 on chromosome 1, complete sequence Length = 8531 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 caggctcctgcctctgcctg 113 |||||||||||||||||||| Sbjct: 7168 caggctcctgcctctgcctg 7187
>gb|AC016866.12| Homo sapiens chromosome 18, clone RP11-15F12, complete sequence Length = 171112 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 aggctcctgcctctgcctgc 114 |||||||||||||||||||| Sbjct: 55838 aggctcctgcctctgcctgc 55819
>dbj|AK144128.1| Mus musculus B cells CRL-1669 BCL1 Clone 13.20-3B3 cDNA, RIKEN full-length enriched library, clone:G430030I10 product:zinc finger, DHHC domain containing 6, full insert sequence Length = 2236 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 caccaccaccaccaacccaaaaag 24 ||||||||||||||| |||||||| Sbjct: 2187 caccaccaccaccaaaccaaaaag 2164
>gb|AY056389.1| Arabidopsis thaliana At1g28200/F3H9_12 mRNA, complete cds Length = 984 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gccgacgccaccaagaaggc 203 |||||||||||||||||||| Sbjct: 309 gccgacgccaccaagaaggc 328
>gb|AC101922.12| Mus musculus chromosome 3, clone RP24-182A8, complete sequence Length = 173400 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 tcctgcctctgcctgccctttcca 122 ||||||||||||||||||| |||| Sbjct: 118566 tcctgcctctgcctgccctgtcca 118543
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 gccgccgccgcgcctctcttccaggctc 100 ||||||||||||||||||| | |||||| Sbjct: 5845 gccgccgccgcgcctctctccaaggctc 5818
>emb|BX816983.1|CNS0AEHK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZH04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 884 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gccgacgccaccaagaaggc 203 |||||||||||||||||||| Sbjct: 219 gccgacgccaccaagaaggc 238
>emb|BX813660.1|CNS0ADPP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB30ZC12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1002 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gccgacgccaccaagaaggc 203 |||||||||||||||||||| Sbjct: 291 gccgacgccaccaagaaggc 310
>emb|BX818639.1|CNS0AAQ2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL8ZB03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 968 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gccgacgccaccaagaaggc 203 |||||||||||||||||||| Sbjct: 325 gccgacgccaccaagaaggc 344
>emb|BX841957.1|CNS09Y2E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL5ZA11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 932 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gccgacgccaccaagaaggc 203 |||||||||||||||||||| Sbjct: 291 gccgacgccaccaagaaggc 310
>gb|AC135724.9| Homo sapiens chromosome 17, clone CTD-2538H15, complete sequence Length = 160515 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 caggctcctgcctctgcctg 113 |||||||||||||||||||| Sbjct: 59322 caggctcctgcctctgcctg 59341
>gb|AC136698.6| Homo sapiens chromosome 15, clone RP13-262C2, complete sequence Length = 169605 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tccaggctcctgcctctgcc 111 |||||||||||||||||||| Sbjct: 64190 tccaggctcctgcctctgcc 64209
>gb|AY086994.1| Arabidopsis thaliana clone 30245 mRNA, complete sequence Length = 978 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gccgacgccaccaagaaggc 203 |||||||||||||||||||| Sbjct: 309 gccgacgccaccaagaaggc 328
>gb|AC104758.12| Homo sapiens chromosome 15, clone RP11-114H24, complete sequence Length = 175763 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tccaggctcctgcctctgcc 111 |||||||||||||||||||| Sbjct: 5760 tccaggctcctgcctctgcc 5741
>gb|AF174428.1|AF174428 Arabidopsis thaliana FH protein interacting protein FIP1 (FIP1) mRNA, complete cds Length = 1008 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gccgacgccaccaagaaggc 203 |||||||||||||||||||| Sbjct: 309 gccgacgccaccaagaaggc 328
>emb|BX510908.8| Mouse DNA sequence from clone RP23-264F3 on chromosome 2, complete sequence Length = 80804 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ctcctgcctctgcctgccct 117 |||||||||||||||||||| Sbjct: 120 ctcctgcctctgcctgccct 139
>gb|AC004526.1|AC004526 Homo sapiens chromosome 17, Neurofibromatosis 1 locus, complete sequence Length = 297898 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 caggctcctgcctctgcctg 113 |||||||||||||||||||| Sbjct: 219344 caggctcctgcctctgcctg 219325
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 ccgccccggcaggcgcggccgccg 163 |||||| ||||||||||||||||| Sbjct: 2859757 ccgcccgggcaggcgcggccgccg 2859780
>gb|AC099584.8| Mus musculus chromosome 3, clone RP23-1A12, complete sequence Length = 217366 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 tcctgcctctgcctgccctttcca 122 ||||||||||||||||||| |||| Sbjct: 196792 tcctgcctctgcctgccctgtcca 196815
>gb|AC015669.13| Homo sapiens chromosome 18, clone RP11-8L20, complete sequence Length = 105856 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 aggctcctgcctctgcctgc 114 |||||||||||||||||||| Sbjct: 84306 aggctcctgcctctgcctgc 84287
>emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chromosome 2, complete sequence Length = 216415 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 caccaccaccaccaacccaa 20 |||||||||||||||||||| Sbjct: 162831 caccaccaccaccaacccaa 162812
>emb|AL669828.13| Mouse DNA sequence from clone RP23-163J20 on chromosome 2, complete sequence Length = 248940 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ctcctgcctctgcctgccct 117 |||||||||||||||||||| Sbjct: 247060 ctcctgcctctgcctgccct 247079
>emb|AL670758.9| Mouse DNA sequence from clone RP23-235O16 on chromosome X, complete sequence Length = 144854 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gcagaagcctcctctttgcc 75 |||||||||||||||||||| Sbjct: 32063 gcagaagcctcctctttgcc 32044 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,688,314 Number of Sequences: 3902068 Number of extensions: 3688314 Number of successful extensions: 220282 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 219212 Number of HSP's gapped (non-prelim): 1068 length of query: 323 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 301 effective length of database: 17,147,199,772 effective search space: 5161307131372 effective search space used: 5161307131372 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)