ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25o24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467080.1| Oryza sativa (japonica cultivar-group), mRNA 268 2e-68
2dbj|AK108827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 2e-68
3ref|XM_473384.1| Oryza sativa (japonica cultivar-group), predic... 252 1e-63
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 230 4e-57
5dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic D... 230 4e-57
6dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic D... 230 4e-57
7emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 230 4e-57
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
9emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4,... 198 1e-47
10gb|AC135562.3| Oryza sativa (japonica cultivar-group) chromosome... 115 2e-22
11gb|AC139171.3| Oryza sativa (japonica cultivar-group) chromosome... 115 2e-22
12gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome... 115 2e-22
13gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome... 115 2e-22
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
15dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
16gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 115 2e-22
17ref|NM_197771.1| Oryza sativa (japonica cultivar-group) hypothet... 90 1e-14
18dbj|AK107529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
19gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 geno... 84 6e-13
20dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
21gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 84 6e-13
22ref|XM_463956.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.51
23gb|AC092628.3| Homo sapiens BAC clone RP11-279O22 from 7, comple... 44 0.51
24gb|AC099552.6| Homo sapiens BAC clone RP11-1430O6 from 7, comple... 44 0.51
25dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
26emb|AL683881.12| Mouse DNA sequence from clone RP23-10M6 on chro... 44 0.51
27gb|AC166356.1| Mus musculus BAC clone RP23-410F8 from chromosome... 42 2.0
28gb|AC152452.3| Mus musculus BAC clone RP24-279M22 from chromosom... 42 2.0
29gb|AC144537.16| Glycine max clone gmw1-42i18, complete sequence 42 2.0
30gb|AC106897.5| Homo sapiens BAC clone RP11-279O9 from 4, complet... 42 2.0
31gb|AC093797.3| Homo sapiens BAC clone RP11-301L8 from 4, complet... 42 2.0
32dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
33dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.0
34ref|NM_204921.1| Gallus gallus CD5 protein (CD5), mRNA 42 2.0
35emb|Y12011.1|GGCD5 Gallus gallus CD5 mRNA 42 2.0
36emb|AJ306429.1|GGA306429 Gallus gallus CD5 gene 42 2.0
37gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
38emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa... 42 2.0
39gb|AY373337.1| Burkholderia pseudomallei transcriptional activat... 40 8.0
40gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence 40 8.0
41gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 8.0
42gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 8.0
43gb|AC183415.1| Mus musculus BAC clone RP24-121M4 from chromosome... 40 8.0
44gb|AF501236.2| Burkholderia pseudomallei acyl homoserine lactone... 40 8.0
45gb|AY556394.1| Burkholderia thailandensis strain E257 quorum sen... 40 8.0
46gb|AC069503.25| Homo sapiens 12 BAC RP11-87C12 (Roswell Park Can... 40 8.0
47gb|AY533294.1| Burkholderia pseudomallei BpsR (bpsR) gene, compl... 40 8.0
48gb|AY496453.1| Burkholderia pseudomallei BpsR (bpsR) gene, compl... 40 8.0
49gb|AC147113.2| Mus musculus BAC clone RP24-120I13 from chromosom... 40 8.0
50gb|AC140493.3| Mus musculus BAC clone RP24-137I9 from chromosome... 40 8.0
51gb|AC127593.4| Mus musculus BAC clone RP23-390G15 from chromosom... 40 8.0
52gb|AC133078.3| Mus musculus BAC clone RP24-444O21 from chromosom... 40 8.0
53gb|AC122388.5| Mus musculus BAC clone RP24-80J12 from chromosome... 40 8.0
54gb|AC098883.3| Mus musculus BAC clone RP23-122F3 from 16, comple... 40 8.0
55gb|AC145034.2| Homo sapiens chromosome 5 clone RP11-1414O21, com... 40 8.0
56gb|AC142288.1| Pan troglodytes BAC clone RP43-178D12 from 7, com... 40 8.0
57emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.0
58emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segmen... 40 8.0
59emb|AJ841966.1| Eptesicus capensis mitochondrial cyt b gene for ... 40 8.0
60emb|AJ841965.1| Eptesicus capensis mitochondrial cyt b gene for ... 40 8.0
61gb|AC018976.7| Homo sapiens chromosome 10 clone RP11-384N23, com... 40 8.0
62gb|CP000249.1| Frankia sp. CcI3, complete genome 40 8.0
63gb|AC174475.4| Mus musculus BAC clone RP24-169K6 from chromosome... 40 8.0
64gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 8.0
65dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
66gb|AC139500.2| Homo sapiens chromosome 5 clone RP11-864E4, compl... 40 8.0
67gb|AC108108.2| Homo sapiens chromosome 5 clone RP11-260M21, comp... 40 8.0
68dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
69gb|AF195819.1|AF195819 Glycine max isoflavone synthase 2 (ifs2) ... 40 8.0
70gb|AF195799.1|AF195799 Glycine max isoflavone synthase 2 (ifs2) ... 40 8.0
71gb|AY552613.1| Glycine max isoflavone synthase 2 gene, complete cds 40 8.0
72gb|AY104693.1| Zea mays PCO099229 mRNA sequence 40 8.0
73gb|AF135484.1|AF135484 Glycine max cytochrome P450 monooxygenase... 40 8.0
74gb|AF098806.1|AF098806 Sorghum bicolor Gypsy-Ty3 type retrotrans... 40 8.0
75gb|AF022462.1|AF022462 Glycine max cytochrome P450 monooxygenase... 40 8.0
76gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 8.0
77gb|AC005685.1|AC005685 Homo sapiens clone UWGC:g1397a149 from 7p... 40 8.0
78emb|AL732560.11| Mouse DNA sequence from clone RP24-209P15 on ch... 40 8.0 
>ref|XM_467080.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 994

 Score =  268 bits (135), Expect = 2e-68
 Identities = 203/223 (91%), Gaps = 2/223 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgtgcaccgtctcctcatgcaccaccgtgctcgccgccgtcaagttcatggnatgacgta 60
           |||||| || |||||||| |||| |||||||| |||| ||||||||||||| ||||| ||
Sbjct: 405 cgtgcatcggctcctcat-caccgccgtgctctccgcagtcaagttcatgg-atgacata 462

                                                                       
Query: 61  tgctacaacaacgcgtacttcgccaaggttgggggcatcagcctggtcgagatgaactac 120
           |||||||||||||| |||||||||||||| ||||||||||||||||  ||||||||||||
Sbjct: 463 tgctacaacaacgcctacttcgccaaggtcgggggcatcagcctggcggagatgaactac 522

                                                                       
Query: 121 ctggaggtcgacttcctgtttggcgtcgggttcgacctcaacgtcacgccggagacgttc 180
           || ||||| ||||||||||| ||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 523 ctcgaggtggacttcctgttcggcgtagggttcgacctgaacgtgacgccggagacgttc 582

                                                      
Query: 181 ggccactactgcgccgtgctccagtccgagatgctctgcgcgg 223
           | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gccgactactgcgccgtgctccagtccgagatgctctgcgcgg 625
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>dbj|AK108827.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-F11, full
           insert sequence
          Length = 994

 Score =  268 bits (135), Expect = 2e-68
 Identities = 203/223 (91%), Gaps = 2/223 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgtgcaccgtctcctcatgcaccaccgtgctcgccgccgtcaagttcatggnatgacgta 60
           |||||| || |||||||| |||| |||||||| |||| ||||||||||||| ||||| ||
Sbjct: 405 cgtgcatcggctcctcat-caccgccgtgctctccgcagtcaagttcatgg-atgacata 462

                                                                       
Query: 61  tgctacaacaacgcgtacttcgccaaggttgggggcatcagcctggtcgagatgaactac 120
           |||||||||||||| |||||||||||||| ||||||||||||||||  ||||||||||||
Sbjct: 463 tgctacaacaacgcctacttcgccaaggtcgggggcatcagcctggcggagatgaactac 522

                                                                       
Query: 121 ctggaggtcgacttcctgtttggcgtcgggttcgacctcaacgtcacgccggagacgttc 180
           || ||||| ||||||||||| ||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 523 ctcgaggtggacttcctgttcggcgtagggttcgacctgaacgtgacgccggagacgttc 582

                                                      
Query: 181 ggccactactgcgccgtgctccagtccgagatgctctgcgcgg 223
           | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gccgactactgcgccgtgctccagtccgagatgctctgcgcgg 625
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>ref|XM_473384.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 639

 Score =  252 bits (127), Expect = 1e-63
 Identities = 198/219 (90%), Gaps = 2/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgtgcaccgtctcctcatgcaccaccgtgctcgccgccgtcaagttcatggnatgacgta 60
           ||||||||| |||||||| |||| ||||||||||||||||||||||||||| | ||| ||
Sbjct: 306 cgtgcaccgcctcctcat-caccgccgtgctcgccgccgtcaagttcatgg-acgacata 363

                                                                       
Query: 61  tgctacaacaacgcgtacttcgccaaggttgggggcatcagcctggtcgagatgaactac 120
           |||||||||||||| |||||||||||||| || ||| |||||||    ||||||||||||
Sbjct: 364 tgctacaacaacgcctacttcgccaaggtcggcggcgtcagcctcccggagatgaactac 423

                                                                       
Query: 121 ctggaggtcgacttcctgtttggcgtcgggttcgacctcaacgtcacgccggagacgttc 180
           || |||||||||||||| || |||||||| |||||||| |||||  ||||||||||||||
Sbjct: 424 ctcgaggtcgacttcctcttcggcgtcggcttcgacctgaacgtgtcgccggagacgttc 483

                                                  
Query: 181 ggccactactgcgccgtgctccagtccgagatgctctgc 219
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggccactactgcgccgtgctccagtccgagatgctctgc 522
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  230 bits (116), Expect = 4e-57
 Identities = 152/164 (92%)
 Strand = Plus / Minus

                                                                            
Query: 60       atgctacaacaacgcgtacttcgccaaggttgggggcatcagcctggtcgagatgaacta 119
                ||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||||||
Sbjct: 26294425 atgctacaacaacgcctacttcgccaaggtcgggggcatcagcctggcggagatgaacta 26294366

                                                                            
Query: 120      cctggaggtcgacttcctgtttggcgtcgggttcgacctcaacgtcacgccggagacgtt 179
                ||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 26294365 cctcgaggtggacttcctgttcggcgtagggttcgacctgaacgtgacgccggagacgtt 26294306

                                                            
Query: 180      cggccactactgcgccgtgctccagtccgagatgctctgcgcgg 223
                || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 26294305 cgccgactactgcgccgtgctccagtccgagatgctctgcgcgg 26294262



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 45/51 (88%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                   
Query: 1        cgtgcaccgtctcctcatgcaccaccgtgctcgccgccgtcaagttcatgg 51
                |||||| || |||||||| |||| |||||||| |||| |||||||||||||
Sbjct: 26295773 cgtgcatcggctcctcat-caccgccgtgctctccgcagtcaagttcatgg 26295724



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                             
Query: 156     cctcaacgtcacgccggagacgttcggccactactgcgccgtgctc 201
               ||||||||||||||||| ||| |||| |  ||||||||||| ||||
Sbjct: 1332953 cctcaacgtcacgccggcgaccttcgccacctactgcgccgcgctc 1332998
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>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:P0491E01
          Length = 136150

 Score =  230 bits (116), Expect = 4e-57
 Identities = 152/164 (92%)
 Strand = Plus / Minus

                                                                         
Query: 60    atgctacaacaacgcgtacttcgccaaggttgggggcatcagcctggtcgagatgaacta 119
             ||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||||||
Sbjct: 26777 atgctacaacaacgcctacttcgccaaggtcgggggcatcagcctggcggagatgaacta 26718

                                                                         
Query: 120   cctggaggtcgacttcctgtttggcgtcgggttcgacctcaacgtcacgccggagacgtt 179
             ||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 26717 cctcgaggtggacttcctgttcggcgtagggttcgacctgaacgtgacgccggagacgtt 26658

                                                         
Query: 180   cggccactactgcgccgtgctccagtccgagatgctctgcgcgg 223
             || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 26657 cgccgactactgcgccgtgctccagtccgagatgctctgcgcgg 26614



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 45/51 (88%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                
Query: 1     cgtgcaccgtctcctcatgcaccaccgtgctcgccgccgtcaagttcatgg 51
             |||||| || |||||||| |||| |||||||| |||| |||||||||||||
Sbjct: 28125 cgtgcatcggctcctcat-caccgccgtgctctccgcagtcaagttcatgg 28076
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>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0012J10
          Length = 132375

 Score =  230 bits (116), Expect = 4e-57
 Identities = 152/164 (92%)
 Strand = Plus / Minus

                                                                          
Query: 60     atgctacaacaacgcgtacttcgccaaggttgggggcatcagcctggtcgagatgaacta 119
              ||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||||||
Sbjct: 117266 atgctacaacaacgcctacttcgccaaggtcgggggcatcagcctggcggagatgaacta 117207

                                                                          
Query: 120    cctggaggtcgacttcctgtttggcgtcgggttcgacctcaacgtcacgccggagacgtt 179
              ||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 117206 cctcgaggtggacttcctgttcggcgtagggttcgacctgaacgtgacgccggagacgtt 117147

                                                          
Query: 180    cggccactactgcgccgtgctccagtccgagatgctctgcgcgg 223
              || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 117146 cgccgactactgcgccgtgctccagtccgagatgctctgcgcgg 117103



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 45/51 (88%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                 
Query: 1      cgtgcaccgtctcctcatgcaccaccgtgctcgccgccgtcaagttcatgg 51
              |||||| || |||||||| |||| |||||||| |||| |||||||||||||
Sbjct: 118614 cgtgcatcggctcctcat-caccgccgtgctctccgcagtcaagttcatgg 118565
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score =  230 bits (116), Expect = 4e-57
 Identities = 152/164 (92%)
 Strand = Plus / Minus

                                                                         
Query: 60    atgctacaacaacgcgtacttcgccaaggttgggggcatcagcctggtcgagatgaacta 119
             ||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||||||
Sbjct: 16301 atgctacaacaacgcctacttcgccaaggtcgggggcatcagcctggcggagatgaacta 16242

                                                                         
Query: 120   cctggaggtcgacttcctgtttggcgtcgggttcgacctcaacgtcacgccggagacgtt 179
             ||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 16241 cctcgaggtggacttcctgttcggcgtagggttcgacctgaacgtgacgccggagacgtt 16182

                                                         
Query: 180   cggccactactgcgccgtgctccagtccgagatgctctgcgcgg 223
             || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 16181 cgccgactactgcgccgtgctccagtccgagatgctctgcgcgg 16138



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 45/51 (88%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                
Query: 1     cgtgcaccgtctcctcatgcaccaccgtgctcgccgccgtcaagttcatgg 51
             |||||| || |||||||| |||| |||||||| |||| |||||||||||||
Sbjct: 17647 cgtgcatcggctcctcat-caccgccgtgctctccgcagtcaagttcatgg 17598
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  198 bits (100), Expect = 1e-47
 Identities = 145/160 (90%)
 Strand = Plus / Minus

                                                                            
Query: 60       atgctacaacaacgcgtacttcgccaaggttgggggcatcagcctggtcgagatgaacta 119
                ||||||||||||||| |||||||||||||| || ||| |||||||    |||||||||||
Sbjct: 27225802 atgctacaacaacgcctacttcgccaaggtcggcggcgtcagcctcccggagatgaacta 27225743

                                                                            
Query: 120      cctggaggtcgacttcctgtttggcgtcgggttcgacctcaacgtcacgccggagacgtt 179
                ||| |||||||||||||| || |||||||| |||||||| |||||  |||||||||||||
Sbjct: 27225742 cctcgaggtcgacttcctcttcggcgtcggcttcgacctgaacgtgtcgccggagacgtt 27225683

                                                        
Query: 180      cggccactactgcgccgtgctccagtccgagatgctctgc 219
                ||||||||||||||||||||||||||||||||||||||||
Sbjct: 27225682 cggccactactgcgccgtgctccagtccgagatgctctgc 27225643



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 48/51 (94%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                   
Query: 1        cgtgcaccgtctcctcatgcaccaccgtgctcgccgccgtcaagttcatgg 51
                ||||||||| |||||||| |||| |||||||||||||||||||||||||||
Sbjct: 27227219 cgtgcaccgcctcctcat-caccgccgtgctcgccgccgtcaagttcatgg 27227170
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>emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0038F03,
             complete sequence
          Length = 136656

 Score =  198 bits (100), Expect = 1e-47
 Identities = 145/160 (90%)
 Strand = Plus / Minus

                                                                         
Query: 60    atgctacaacaacgcgtacttcgccaaggttgggggcatcagcctggtcgagatgaacta 119
             ||||||||||||||| |||||||||||||| || ||| |||||||    |||||||||||
Sbjct: 56891 atgctacaacaacgcctacttcgccaaggtcggcggcgtcagcctcccggagatgaacta 56832

                                                                         
Query: 120   cctggaggtcgacttcctgtttggcgtcgggttcgacctcaacgtcacgccggagacgtt 179
             ||| |||||||||||||| || |||||||| |||||||| |||||  |||||||||||||
Sbjct: 56831 cctcgaggtcgacttcctcttcggcgtcggcttcgacctgaacgtgtcgccggagacgtt 56772

                                                     
Query: 180   cggccactactgcgccgtgctccagtccgagatgctctgc 219
             ||||||||||||||||||||||||||||||||||||||||
Sbjct: 56771 cggccactactgcgccgtgctccagtccgagatgctctgc 56732



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 48/51 (94%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                
Query: 1     cgtgcaccgtctcctcatgcaccaccgtgctcgccgccgtcaagttcatgg 51
             ||||||||| |||||||| |||| |||||||||||||||||||||||||||
Sbjct: 58308 cgtgcaccgcctcctcat-caccgccgtgctcgccgccgtcaagttcatgg 58259
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>gb|AC135562.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0087P19,
              complete sequence
          Length = 172066

 Score =  115 bits (58), Expect = 2e-22
 Identities = 73/78 (93%)
 Strand = Plus / Minus

                                                                          
Query: 142    ggcgtcgggttcgacctcaacgtcacgccggagacgttcggccactactgcgccgtgctc 201
              |||||||| |||||||| |||||  ||| |||||||||||||||||||||||||||||||
Sbjct: 169174 ggcgtcggtttcgacctgaacgtgccgctggagacgttcggccactactgcgccgtgctc 169115

                                
Query: 202    cagtccgagatgctctgc 219
              ||||||||||||||||||
Sbjct: 169114 cagtccgagatgctctgc 169097
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>gb|AC139171.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0024B09, complete sequence
          Length = 132563

 Score =  115 bits (58), Expect = 2e-22
 Identities = 73/78 (93%)
 Strand = Plus / Minus

                                                                         
Query: 142   ggcgtcgggttcgacctcaacgtcacgccggagacgttcggccactactgcgccgtgctc 201
             |||||||| |||||||| |||||  ||| |||||||||||||||||||||||||||||||
Sbjct: 12606 ggcgtcggtttcgacctgaacgtgccgctggagacgttcggccactactgcgccgtgctc 12547

                               
Query: 202   cagtccgagatgctctgc 219
             ||||||||||||||||||
Sbjct: 12546 cagtccgagatgctctgc 12529
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>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01,
              complete sequence
          Length = 146432

 Score =  115 bits (58), Expect = 2e-22
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                          
Query: 146    tcgggttcgacctcaacgtcacgccggagacgttcggccactactgcgccgtgctccagt 205
              |||| |||||||| |||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 135308 tcggtttcgacctgaacgtgccgccggagacgttcggccactactgcgccgtgctccagt 135367

                            
Query: 206    ccgagatgctctgc 219
              ||||||||||||||
Sbjct: 135368 ccgagatgctctgc 135381
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>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09,
             complete sequence
          Length = 148740

 Score =  115 bits (58), Expect = 2e-22
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                         
Query: 146   tcgggttcgacctcaacgtcacgccggagacgttcggccactactgcgccgtgctccagt 205
             |||| |||||||| |||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 28939 tcggtttcgacctgaacgtgccgccggagacgttcggccactactgcgccgtgctccagt 28998

                           
Query: 206   ccgagatgctctgc 219
             ||||||||||||||
Sbjct: 28999 ccgagatgctctgc 29012
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  115 bits (58), Expect = 2e-22
 Identities = 73/78 (93%)
 Strand = Plus / Minus

                                                                            
Query: 142      ggcgtcgggttcgacctcaacgtcacgccggagacgttcggccactactgcgccgtgctc 201
                |||||||| |||||||| |||||  ||| |||||||||||||||||||||||||||||||
Sbjct: 10273010 ggcgtcggtttcgacctgaacgtgccgctggagacgttcggccactactgcgccgtgctc 10272951

                                  
Query: 202      cagtccgagatgctctgc 219
                ||||||||||||||||||
Sbjct: 10272950 cagtccgagatgctctgc 10272933
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  115 bits (58), Expect = 2e-22
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                            
Query: 146      tcgggttcgacctcaacgtcacgccggagacgttcggccactactgcgccgtgctccagt 205
                |||| |||||||| |||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 23203533 tcggtttcgacctgaacgtgccgccggagacgttcggccactactgcgccgtgctccagt 23203592

                              
Query: 206      ccgagatgctctgc 219
                ||||||||||||||
Sbjct: 23203593 ccgagatgctctgc 23203606
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  115 bits (58), Expect = 2e-22
 Identities = 73/78 (93%)
 Strand = Plus / Minus

                                                                            
Query: 142      ggcgtcgggttcgacctcaacgtcacgccggagacgttcggccactactgcgccgtgctc 201
                |||||||| |||||||| |||||  ||| |||||||||||||||||||||||||||||||
Sbjct: 10344707 ggcgtcggtttcgacctgaacgtgccgctggagacgttcggccactactgcgccgtgctc 10344648

                                  
Query: 202      cagtccgagatgctctgc 219
                ||||||||||||||||||
Sbjct: 10344647 cagtccgagatgctctgc 10344630
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>ref|NM_197771.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0027P10.16), mRNA
          Length = 639

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 154/189 (81%), Gaps = 1/189 (0%)
 Strand = Plus / Plus

                                                                       
Query: 25  ccgtgctcgccgccgtcaagttcatggnatgacgtatgctacaacaacgcgtacttcgcc 84
           |||| ||| |||||||||||||| | | | ||| ||||||||||||| || |||||||| 
Sbjct: 317 ccgtcctcaccgccgtcaagttcgtcg-acgacatatgctacaacaatgcctacttcgcg 375

                                                                       
Query: 85  aaggttgggggcatcagcctggtcgagatgaactacctggaggtcgacttcctgtttggc 144
           | ||| || ||||||||| || | |||||||| || || ||||| |||||||| ||||||
Sbjct: 376 agggtgggaggcatcagcttgatggagatgaattatcttgaggtggacttcctctttggc 435

                                                                       
Query: 145 gtcgggttcgacctcaacgtcacgccggagacgttcggccactactgcgccgtgctccag 204
            |||  ||||||||||| ||||||||||   | |||| |  ||||||||||||||| |||
Sbjct: 436 atcgccttcgacctcaatgtcacgccggctgccttcgcctcctactgcgccgtgctgcag 495

                    
Query: 205 tccgagatg 213
             |||||||
Sbjct: 496 agcgagatg 504
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>dbj|AK107529.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-G08, full
           insert sequence
          Length = 845

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 154/189 (81%), Gaps = 1/189 (0%)
 Strand = Plus / Plus

                                                                       
Query: 25  ccgtgctcgccgccgtcaagttcatggnatgacgtatgctacaacaacgcgtacttcgcc 84
           |||| ||| |||||||||||||| | | | ||| ||||||||||||| || |||||||| 
Sbjct: 358 ccgtcctcaccgccgtcaagttcgtcg-acgacatatgctacaacaatgcctacttcgcg 416

                                                                       
Query: 85  aaggttgggggcatcagcctggtcgagatgaactacctggaggtcgacttcctgtttggc 144
           | ||| || ||||||||| || | |||||||| || || ||||| |||||||| ||||||
Sbjct: 417 agggtgggaggcatcagcttgatggagatgaattatcttgaggtggacttcctctttggc 476

                                                                       
Query: 145 gtcgggttcgacctcaacgtcacgccggagacgttcggccactactgcgccgtgctccag 204
            |||  ||||||||||| ||||||||||   | |||| |  ||||||||||||||| |||
Sbjct: 477 atcgccttcgacctcaatgtcacgccggctgccttcgcctcctactgcgccgtgctgcag 536

                    
Query: 205 tccgagatg 213
             |||||||
Sbjct: 537 agcgagatg 545
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>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
             sequence
          Length = 141307

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 126/154 (81%)
 Strand = Plus / Plus

                                                                         
Query: 60    atgctacaacaacgcgtacttcgccaaggttgggggcatcagcctggtcgagatgaacta 119
             |||||||||||| || |||||||| | ||| || ||||||||| || | |||||||| ||
Sbjct: 65154 atgctacaacaatgcctacttcgcgagggtgggaggcatcagcttgatggagatgaatta 65213

                                                                         
Query: 120   cctggaggtcgacttcctgtttggcgtcgggttcgacctcaacgtcacgccggagacgtt 179
              || ||||| |||||||| |||||| |||  ||||||||||| ||||||||||   | ||
Sbjct: 65214 tcttgaggtggacttcctctttggcatcgccttcgacctcaatgtcacgccggctgcctt 65273

                                               
Query: 180   cggccactactgcgccgtgctccagtccgagatg 213
             || |  ||||||||||||||| |||  |||||||
Sbjct: 65274 cgcctcctactgcgccgtgctgcagagcgagatg 65307
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 126/154 (81%)
 Strand = Plus / Plus

                                                                            
Query: 60       atgctacaacaacgcgtacttcgccaaggttgggggcatcagcctggtcgagatgaacta 119
                |||||||||||| || |||||||| | ||| || ||||||||| || | |||||||| ||
Sbjct: 21750471 atgctacaacaatgcctacttcgcgagggtgggaggcatcagcttgatggagatgaatta 21750530

                                                                            
Query: 120      cctggaggtcgacttcctgtttggcgtcgggttcgacctcaacgtcacgccggagacgtt 179
                 || ||||| |||||||| |||||| |||  ||||||||||| ||||||||||   | ||
Sbjct: 21750531 tcttgaggtggacttcctctttggcatcgccttcgacctcaatgtcacgccggctgcctt 21750590

                                                  
Query: 180      cggccactactgcgccgtgctccagtccgagatg 213
                || |  ||||||||||||||| |||  |||||||
Sbjct: 21750591 cgcctcctactgcgccgtgctgcagagcgagatg 21750624
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 126/154 (81%)
 Strand = Plus / Plus

                                                                            
Query: 60       atgctacaacaacgcgtacttcgccaaggttgggggcatcagcctggtcgagatgaacta 119
                |||||||||||| || |||||||| | ||| || ||||||||| || | |||||||| ||
Sbjct: 21762134 atgctacaacaatgcctacttcgcgagggtgggaggcatcagcttgatggagatgaatta 21762193

                                                                            
Query: 120      cctggaggtcgacttcctgtttggcgtcgggttcgacctcaacgtcacgccggagacgtt 179
                 || ||||| |||||||| |||||| |||  ||||||||||| ||||||||||   | ||
Sbjct: 21762194 tcttgaggtggacttcctctttggcatcgccttcgacctcaatgtcacgccggctgcctt 21762253

                                                  
Query: 180      cggccactactgcgccgtgctccagtccgagatg 213
                || |  ||||||||||||||| |||  |||||||
Sbjct: 21762254 cgcctcctactgcgccgtgctgcagagcgagatg 21762287
to top
>ref|XM_463956.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 762

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 156 cctcaacgtcacgccggagacgttcggccactactgcgccgtgctc 201
           ||||||||||||||||| ||| |||| |  ||||||||||| ||||
Sbjct: 522 cctcaacgtcacgccggcgaccttcgccacctactgcgccgcgctc 567
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>gb|AC092628.3| Homo sapiens BAC clone RP11-279O22 from 7, complete sequence
          Length = 144491

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 530   tttttgtttcttgtggtgtgta 551
             ||||||||||||||||||||||
Sbjct: 30184 tttttgtttcttgtggtgtgta 30205
to top
>gb|AC099552.6| Homo sapiens BAC clone RP11-1430O6 from 7, complete sequence
          Length = 165873

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 530 tttttgtttcttgtggtgtgta 551
           ||||||||||||||||||||||
Sbjct: 860 tttttgtttcttgtggtgtgta 881
to top
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0482F12
          Length = 147735

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 156   cctcaacgtcacgccggagacgttcggccactactgcgccgtgctc 201
             ||||||||||||||||| ||| |||| |  ||||||||||| ||||
Sbjct: 14225 cctcaacgtcacgccggcgaccttcgccacctactgcgccgcgctc 14270
to top
>emb|AL683881.12| Mouse DNA sequence from clone RP23-10M6 on chromosome 2, complete
             sequence
          Length = 155168

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 526   ttggtttttgtttcttgtggtg 547
             ||||||||||||||||||||||
Sbjct: 50009 ttggtttttgtttcttgtggtg 49988
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>gb|AC166356.1| Mus musculus BAC clone RP23-410F8 from chromosome 15, complete sequence
          Length = 165082

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 392   tgcgtgcatctctgttagtctgtgt 416
             ||||||||||||||| |||||||||
Sbjct: 30102 tgcgtgcatctctgtaagtctgtgt 30078
to top
>gb|AC152452.3| Mus musculus BAC clone RP24-279M22 from chromosome 9, complete sequence
          Length = 176943

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 439   agatagctatagctaggtggt 459
             |||||||||||||||||||||
Sbjct: 93392 agatagctatagctaggtggt 93372
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>gb|AC144537.16| Glycine max clone gmw1-42i18, complete sequence
          Length = 113397

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 416   tgtttaaatttgtagtgctag 436
             |||||||||||||||||||||
Sbjct: 97665 tgtttaaatttgtagtgctag 97645
to top
>gb|AC106897.5| Homo sapiens BAC clone RP11-279O9 from 4, complete sequence
          Length = 161572

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 463    catcttcctccatgccctgct 483
              |||||||||||||||||||||
Sbjct: 134171 catcttcctccatgccctgct 134151
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>gb|AC093797.3| Homo sapiens BAC clone RP11-301L8 from 4, complete sequence
          Length = 169814

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 463   catcttcctccatgccctgct 483
             |||||||||||||||||||||
Sbjct: 31718 catcttcctccatgccctgct 31698
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 533      ttgtttcttgtggtgtgtagg 553
                |||||||||||||||||||||
Sbjct: 25899658 ttgtttcttgtggtgtgtagg 25899638
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 19      gcaccaccgtgctcgccgccg 39
               |||||||||||||||||||||
Sbjct: 4282920 gcaccaccgtgctcgccgccg 4282900
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>ref|NM_204921.1| Gallus gallus CD5 protein (CD5), mRNA
          Length = 1999

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  ctcctcctgcgccgcccaggc 247
            |||||||||||||||||||||
Sbjct: 1919 ctcctcctgcgccgcccaggc 1899
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>emb|Y12011.1|GGCD5 Gallus gallus CD5 mRNA
          Length = 1999

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  ctcctcctgcgccgcccaggc 247
            |||||||||||||||||||||
Sbjct: 1919 ctcctcctgcgccgcccaggc 1899
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>emb|AJ306429.1|GGA306429 Gallus gallus CD5 gene
          Length = 3437

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  ctcctcctgcgccgcccaggc 247
            |||||||||||||||||||||
Sbjct: 3380 ctcctcctgcgccgcccaggc 3360
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 533      ttgtttcttgtggtgtgtagg 553
                |||||||||||||||||||||
Sbjct: 25827834 ttgtttcttgtggtgtgtagg 25827814
to top
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 137492

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 533    ttgtttcttgtggtgtgtagg 553
              |||||||||||||||||||||
Sbjct: 121109 ttgtttcttgtggtgtgtagg 121089
to top
>gb|AY373337.1| Burkholderia pseudomallei transcriptional activator (bpsR) and
           autoinducer synthase (bpsI) genes, complete cds
          Length = 2094

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 atgaactacctggaggtcga 131
           ||||||||||||||||||||
Sbjct: 516 atgaactacctggaggtcga 497
to top
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence
          Length = 183990

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    gcgcggaggctcctcctgcg 237
              ||||||||||||||||||||
Sbjct: 176693 gcgcggaggctcctcctgcg 176674
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     atgaactacctggaggtcga 131
               ||||||||||||||||||||
Sbjct: 3000317 atgaactacctggaggtcga 3000336
to top
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 264     ctccgaatccgaggacgatgccgc 287
               |||||| |||||||||||||||||
Sbjct: 1400497 ctccgagtccgaggacgatgccgc 1400474
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>gb|AC183415.1| Mus musculus BAC clone RP24-121M4 from chromosome y, complete sequence
          Length = 188947

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 522   gtccttggtttttgtttctt 541
             ||||||||||||||||||||
Sbjct: 21830 gtccttggtttttgtttctt 21811
to top
>gb|AF501236.2| Burkholderia pseudomallei acyl homoserine lactone synthase (bpsI) and
            transcriptional activator (bpsR) genes, complete cds
          Length = 2178

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  atgaactacctggaggtcga 131
            ||||||||||||||||||||
Sbjct: 1609 atgaactacctggaggtcga 1628
to top
>gb|AY556394.1| Burkholderia thailandensis strain E257 quorum sensing
           transcriptional activator gene, complete cds
          Length = 720

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 atgaactacctggaggtcga 131
           ||||||||||||||||||||
Sbjct: 205 atgaactacctggaggtcga 224
to top
>gb|AC069503.25| Homo sapiens 12 BAC RP11-87C12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186580

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 241   cccaggctgcagcactgctgcctc 264
             ||||||||||||||| ||||||||
Sbjct: 60250 cccaggctgcagcacagctgcctc 60273
to top
>gb|AY533294.1| Burkholderia pseudomallei BpsR (bpsR) gene, complete cds
          Length = 720

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 atgaactacctggaggtcga 131
           ||||||||||||||||||||
Sbjct: 205 atgaactacctggaggtcga 224
to top
>gb|AY496453.1| Burkholderia pseudomallei BpsR (bpsR) gene, complete cds
          Length = 720

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 atgaactacctggaggtcga 131
           ||||||||||||||||||||
Sbjct: 205 atgaactacctggaggtcga 224
to top
>gb|AC147113.2| Mus musculus BAC clone RP24-120I13 from chromosome Y, complete sequence
          Length = 196099

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 522   gtccttggtttttgtttctt 541
             ||||||||||||||||||||
Sbjct: 21313 gtccttggtttttgtttctt 21294
to top
>gb|AC140493.3| Mus musculus BAC clone RP24-137I9 from chromosome Y, complete sequence
          Length = 150186

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 522    gtccttggtttttgtttctt 541
              ||||||||||||||||||||
Sbjct: 109513 gtccttggtttttgtttctt 109532
to top
>gb|AC127593.4| Mus musculus BAC clone RP23-390G15 from chromosome 10, complete
             sequence
          Length = 214856

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   ccttggtttttgtttcttgt 543
             ||||||||||||||||||||
Sbjct: 36345 ccttggtttttgtttcttgt 36326
to top
>gb|AC133078.3| Mus musculus BAC clone RP24-444O21 from chromosome 10, complete
             sequence
          Length = 141420

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 524   ccttggtttttgtttcttgt 543
             ||||||||||||||||||||
Sbjct: 31452 ccttggtttttgtttcttgt 31471
to top
>gb|AC122388.5| Mus musculus BAC clone RP24-80J12 from chromosome 16, complete sequence
          Length = 214268

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 465    tcttcctccatgccctgctg 484
              ||||||||||||||||||||
Sbjct: 124895 tcttcctccatgccctgctg 124914
to top
>gb|AC098883.3| Mus musculus BAC clone RP23-122F3 from 16, complete sequence
          Length = 211348

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    tcttcctccatgccctgctg 484
              ||||||||||||||||||||
Sbjct: 203313 tcttcctccatgccctgctg 203294
to top
>gb|AC145034.2| Homo sapiens chromosome 5 clone RP11-1414O21, complete sequence
          Length = 210205

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 407    tagtctgtgtgtttaaattt 426
              ||||||||||||||||||||
Sbjct: 117663 tagtctgtgtgtttaaattt 117682
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>gb|AC142288.1| Pan troglodytes BAC clone RP43-178D12 from 7, complete sequence
          Length = 187294

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 480   tgctgcaagatgcttgcaac 499
             ||||||||||||||||||||
Sbjct: 35771 tgctgcaagatgcttgcaac 35752
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     atgaactacctggaggtcga 131
               ||||||||||||||||||||
Sbjct: 1179077 atgaactacctggaggtcga 1179096
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>emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segment 3/7
          Length = 347365

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   agccagcagcagctcgcggc 317
             ||||||||||||||||||||
Sbjct: 58663 agccagcagcagctcgcggc 58644
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>emb|AJ841966.1| Eptesicus capensis mitochondrial cyt b gene for cytochrome b,
           specimen voucher MR-M981
          Length = 1140

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 tgtttaaatttgtagtgctagccagata 443
           |||| |||||||||||||||| ||||||
Sbjct: 141 tgttaaaatttgtagtgctaggcagata 114
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>emb|AJ841965.1| Eptesicus capensis mitochondrial cyt b gene for cytochrome b,
           specimen voucher MR-M963
          Length = 1140

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 tgtttaaatttgtagtgctagccagata 443
           |||| |||||||||||||||| ||||||
Sbjct: 141 tgttaaaatttgtagtgctaggcagata 114
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>gb|AC018976.7| Homo sapiens chromosome 10 clone RP11-384N23, complete sequence
          Length = 187260

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 482    ctgcaagatgcttgcaacaa 501
              ||||||||||||||||||||
Sbjct: 131456 ctgcaagatgcttgcaacaa 131475
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 227     ctcctcctgcgccgcccagg 246
               ||||||||||||||||||||
Sbjct: 4112831 ctcctcctgcgccgcccagg 4112850
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>gb|AC174475.4| Mus musculus BAC clone RP24-169K6 from chromosome y, complete sequence
          Length = 199928

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 522   gtccttggtttttgtttctt 541
             ||||||||||||||||||||
Sbjct: 74406 gtccttggtttttgtttctt 74425
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 112     atgaactacctggaggtcga 131
               ||||||||||||||||||||
Sbjct: 1448872 atgaactacctggaggtcga 1448853
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
             complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   gctaggtggtcgtcatcttc 469
             ||||||||||||||||||||
Sbjct: 70187 gctaggtggtcgtcatcttc 70168
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>gb|AC139500.2| Homo sapiens chromosome 5 clone RP11-864E4, complete sequence
          Length = 194350

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 407    tagtctgtgtgtttaaattt 426
              ||||||||||||||||||||
Sbjct: 158926 tagtctgtgtgtttaaattt 158945
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>gb|AC108108.2| Homo sapiens chromosome 5 clone RP11-260M21, complete sequence
          Length = 173597

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 407    tagtctgtgtgtttaaattt 426
              ||||||||||||||||||||
Sbjct: 153933 tagtctgtgtgtttaaattt 153914
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>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1026C12
          Length = 170240

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   gctaggtggtcgtcatcttc 469
             ||||||||||||||||||||
Sbjct: 69486 gctaggtggtcgtcatcttc 69467
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>gb|AF195819.1|AF195819 Glycine max isoflavone synthase 2 (ifs2) gene, complete cds
          Length = 1902

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 509 acatcgtgtactcgtccttggttt 532
           ||||||||| ||||||||||||||
Sbjct: 55  acatcgtgttctcgtccttggttt 32
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>gb|AF195799.1|AF195799 Glycine max isoflavone synthase 2 (ifs2) mRNA, complete cds
          Length = 1824

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 509 acatcgtgtactcgtccttggttt 532
           ||||||||| ||||||||||||||
Sbjct: 57  acatcgtgttctcgtccttggttt 34
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>gb|AY552613.1| Glycine max isoflavone synthase 2 gene, complete cds
          Length = 1914

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 509 acatcgtgtactcgtccttggttt 532
           ||||||||| ||||||||||||||
Sbjct: 61  acatcgtgttctcgtccttggttt 38
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>gb|AY104693.1| Zea mays PCO099229 mRNA sequence
          Length = 1421

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 243 caggctgcagcactgctgcc 262
           ||||||||||||||||||||
Sbjct: 173 caggctgcagcactgctgcc 192
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>gb|AF135484.1|AF135484 Glycine max cytochrome P450 monooxygenase CYP93C1v2p (CYP93C1v2)
           mRNA, complete cds
          Length = 1722

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 509 acatcgtgtactcgtccttggttt 532
           ||||||||| ||||||||||||||
Sbjct: 39  acatcgtgttctcgtccttggttt 16
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>gb|AF098806.1|AF098806 Sorghum bicolor Gypsy-Ty3 type retrotransposon RetroSor1, complete
             sequence
          Length = 13483

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   gcgcggaggctcctcctgcg 237
             ||||||||||||||||||||
Sbjct: 11978 gcgcggaggctcctcctgcg 11959
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>gb|AF022462.1|AF022462 Glycine max cytochrome P450 monooxygenase CYP93C1p (CYP93C1) mRNA,
           complete cds
          Length = 1824

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 509 acatcgtgtactcgtccttggttt 532
           ||||||||| ||||||||||||||
Sbjct: 57  acatcgtgttctcgtccttggttt 34
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 112     atgaactacctggaggtcga 131
               ||||||||||||||||||||
Sbjct: 1779585 atgaactacctggaggtcga 1779566
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>gb|AC005685.1|AC005685 Homo sapiens clone UWGC:g1397a149 from 7p14-15, complete sequence
          Length = 42648

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 480   tgctgcaagatgcttgcaac 499
             ||||||||||||||||||||
Sbjct: 35126 tgctgcaagatgcttgcaac 35145
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>emb|AL732560.11| Mouse DNA sequence from clone RP24-209P15 on chromosome 2, complete
             sequence
          Length = 104663

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   ttggtttttgtttcttgtgg 545
             ||||||||||||||||||||
Sbjct: 55001 ttggtttttgtttcttgtgg 54982


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,129,502
Number of Sequences: 3902068
Number of extensions: 5129502
Number of successful extensions: 103848
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102604
Number of HSP's gapped (non-prelim): 1230
length of query: 587
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 564
effective length of database: 17,143,297,704
effective search space: 9668819905056
effective search space used: 9668819905056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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