ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal26d22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domai... 32 0.92
2DAB2_MOUSE (P98078) Disabled homolog 2 (DOC-2) (Mitogen-responsi... 30 1.0
3G59B_DROER (Q8I1F0) Putative gustatory receptor 59b 31 2.7
4ZN282_HUMAN (Q9UDV7) Zinc finger protein 282 (HTLV-I U5RE-bindin... 29 7.8
5HAA1_YEAST (Q12753) Transcriptional activator HAA1 29 7.8

>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor|
           (EGF-like domain-containing protein 5) (Multiple
           EGF-like domain protein 5)
          Length = 600

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = +3

Query: 282 SSREVMTMVRCSRDFTPVDQYRIVGPAS--CVS--NNASQFWYMAVSYAYISDLPRDCMA 449
           +S  + T   C     P+   +I  P S  C++  +N + FW       Y+ DL R+C+ 
Sbjct: 390 NSDSICTQCECHGHVDPIKTPKICKPESGECINCLHNTTGFWCEKCLEGYVRDLQRNCIK 449

Query: 450 VSKGIPVP 473
               +P P
Sbjct: 450 QEVIVPTP 457



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>DAB2_MOUSE (P98078) Disabled homolog 2 (DOC-2) (Mitogen-responsive|
           phosphoprotein)
          Length = 766

 Score = 30.0 bits (66), Expect(2) = 1.0
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = +2

Query: 14  PVQQIWT*DP-VPVPAFEPPTIVWCPRHAV 100
           P  Q+W   P    PA  PP  VWCP  +V
Sbjct: 545 PAVQVWNQSPSFATPASPPPPTVWCPTTSV 574



 Score = 20.8 bits (42), Expect(2) = 1.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 189 NIIPLVEPSTQCPFQKLISANLATDVYKQPQS 284
           NI P    STQ   Q ++S+ LAT     P++
Sbjct: 593 NIFPPPTMSTQSSPQPMMSSVLATPPQPPPRN 624



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>G59B_DROER (Q8I1F0) Putative gustatory receptor 59b|
          Length = 587

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
 Frame = -3

Query: 524 ICLEGVIIVGAMIIISEGYGDAFRNSHA-------------VPWKIRYVCIRYRHIPELA 384
           I +  +++    +++  GY   F  ++A             V W++R V +  RH P+L 
Sbjct: 285 IVVHSIMLFQFHLVMRGGYTTLFSRTYALLANIITLTMLPIVMWQVRSVFLAKRHYPQLI 344

Query: 383 SVVTDTRGWAYYTVLIY 333
            +  D R    + +++Y
Sbjct: 345 LITNDIRYTVSFLIILY 361



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>ZN282_HUMAN (Q9UDV7) Zinc finger protein 282 (HTLV-I U5RE-binding protein 1)|
           (HUB-1)
          Length = 671

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 69  GGSKAGTGTGSQVHICCTGGXNK 1
           GG++AGTG G     CC GG  +
Sbjct: 484 GGAEAGTGAGGGCGSCCPGGLRR 506



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>HAA1_YEAST (Q12753) Transcriptional activator HAA1|
          Length = 694

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
 Frame = +1

Query: 70  HHRVVPQACSYHALGMTQSLITMFLAPAELPRS------ITGTVSSTSSHLWNHQRS 222
           HH  VP   S  +L  +QSL   F  P   P S      +TG ++ T+ +  NHQ S
Sbjct: 175 HH--VPSLASISSLQSSQSLDQNFSIPQSPPLSSMSFNFLTGNINETNQNHSNHQHS 229


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,482,426
Number of Sequences: 219361
Number of extensions: 1990017
Number of successful extensions: 5434
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5397
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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