| Clone Name | baal26d22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ841792.1| Zea mays mRNA for Ser/Thr receptor-like kinase (lrk1 gene) Length = 2039 Score = 127 bits (64), Expect = 4e-26 Identities = 136/160 (85%) Strand = Plus / Plus Query: 28 atggacctgagatccggttcccgttccggcttttgagccacccaccatcgtgtggtgccc 87 ||||||| |||||||||||||| || |||||| |||||||| ||||| ||||| | | Sbjct: 129 atggaccagagatccggttcccctttcggcttccaagccaccctccatcctgtggcacac 188 Query: 88 caggcatgcagttatcatgctctgggcatgacacaatccttgatcaccatgttcttggct 147 | || ||||| ||||||||||||||||||||||| ||||||||||| | |||||||||| Sbjct: 189 ctgggatgcaattatcatgctctgggcatgacaccatccttgatcatccagttcttggct 248 Query: 148 cctgcagagttaccgagatctattacaggcaccgtgtcat 187 |||||||||| || | || ||||||||||| |||||||| Sbjct: 249 cctgcagagtgacagcaatatattacaggcatcgtgtcat 288
>gb|AF100768.1|AF100768 Zea mays ZM2LRK pseudogene sequence Length = 2700 Score = 127 bits (64), Expect = 4e-26 Identities = 136/160 (85%) Strand = Plus / Plus Query: 28 atggacctgagatccggttcccgttccggcttttgagccacccaccatcgtgtggtgccc 87 ||||||| |||||||||||||| || |||||| |||||||| ||||| ||||| | | Sbjct: 435 atggaccagagatccggttcccctttcggcttccaagccaccctccatcctgtggcacac 494 Query: 88 caggcatgcagttatcatgctctgggcatgacacaatccttgatcaccatgttcttggct 147 | || ||||| ||||||||||||||||||||||| ||||||||||| | |||||||||| Sbjct: 495 ctgggatgcaattatcatgctctgggcatgacaccatccttgatcatccagttcttggct 554 Query: 148 cctgcagagttaccgagatctattacaggcaccgtgtcat 187 |||||||||| || | || ||||||||||| |||||||| Sbjct: 555 cctgcagagtgacagcaatatattacaggcatcgtgtcat 594
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 117 bits (59), Expect = 4e-23 Identities = 148/178 (83%) Strand = Plus / Plus Query: 1 cttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggcttt 60 |||||| |||||| ||||||||||| ||||||| |||||| ||| ||||||||| |||| Sbjct: 769545 cttgttcatcccagcggtgcagcaagcatggaccagagatcaggtacccgttccgtcttt 769604 Query: 61 tgagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgaca 120 || || || ||||| || ||||| || || ||||| |||||||||||||| || |||| Sbjct: 769605 cgacacaacctccatcatgcggtgcacctggtatgcaattatcatgctctggacaagaca 769664 Query: 121 caatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggca 178 | ||||| ||||||| ||||||||| ||||||| ||| ||| ||| ||||||||||| Sbjct: 769665 ccatcctggatcaccctgttcttggttcctgcaaagtgaccatgatatattacaggca 769722 Score = 109 bits (55), Expect = 1e-20 Identities = 192/238 (80%) Strand = Plus / Plus Query: 2 ttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggctttt 61 ||||| ||| || |||||||||||| ||||||| || || |||||||| ||| |||||| Sbjct: 788876 ttgttcatcacagcggtgcagcaaacatggaccagatatacggttccccttcaggctttc 788935 Query: 62 gagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgacac 121 | |||| ||||| ||||| || ||||||||||| ||||||||||||||||| || Sbjct: 788936 aacccacgatccatcatgtggcatgcctggcatgcagttgtcatgctctgggcatgatac 788995 Query: 122 aatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggcaccg 181 |||||| ||||||| ||| | |||||||||| ||| |||| || ||||||||| |||| Sbjct: 788996 aatcctggatcaccctgtcttaggctcctgcaaagtgaccgcaatatattacaggtaccg 789055 Query: 182 tgtcatcaacatcatcccacttgtggaaccatcaacgcagtgcccatttcagaagctc 239 |||||| || ||||| ||||||||| ||||| | | |||||| ||||||||||| Sbjct: 789056 tgtcataaatgccatcctccttgtggaatcatcatcaaattgcccacttcagaagctc 789113 Score = 101 bits (51), Expect = 2e-18 Identities = 146/178 (82%) Strand = Plus / Plus Query: 1 cttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggcttt 60 |||||| ||| || ||||||||||| ||||||| |||||| ||| |||||||||||||| Sbjct: 865069 cttgttcatcacatcggtgcagcaagcatggaccagagatcaggtacccgttccggcttt 865128 Query: 61 tgagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgaca 120 || || || ||||| || || || || || ||||| |||||||||||||| || |||| Sbjct: 865129 cgacacaacctccatcatgcggcgcacctgggatgcaattatcatgctctggacaagaca 865188 Query: 121 caatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggca 178 | ||||| ||||||| ||||||||| ||||||| ||| || ||| ||||||||||| Sbjct: 865189 ccatcctggatcaccctgttcttggttcctgcaaagtgacaatgatatattacaggca 865246 Score = 69.9 bits (35), Expect = 8e-09 Identities = 122/151 (80%) Strand = Plus / Plus Query: 16 ggtgcagcaaatatggacctgagatccggttcccgttccggcttttgagccacccaccat 75 |||||||||| ||||||| |||||| ||||||| |||||||| | || || || |||| Sbjct: 842658 ggtgcagcaagcatggaccagagatcaggttccctttccggctctcgacacaacctccat 842717 Query: 76 cgtgtggtgccccaggcatgcagttatcatgctctgggcatgacacaatccttgatcacc 135 | || || || || |||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct: 842718 catgcggcgcacccggcatgcacttgtcatgctctggacaggacaccatcctcaatcacc 842777 Query: 136 atgttcttggctcctgcagagttaccgagat 166 |||||||| |||||| ||| |||||||| Sbjct: 842778 cagttcttggtccctgcaaagtaaccgagat 842808 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 222 tgcccatttcagaagctcatctcagcaaacttagcaactgatgtgtacaaac 273 |||||| |||||||||||||||| |||| ||| |||||||||||||||||| Sbjct: 923763 tgcccacttcagaagctcatctcgacaaatttatcaactgatgtgtacaaac 923814 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 14 ccggtgcagcaaatatggacctgagatccggttccc 49 ||||||||||||| ||||||| |||||||||||||| Sbjct: 744698 ccggtgcagcaaacatggaccagagatccggttccc 744733 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 73 catcgtgtggtgccccaggcatgcagttatcatgctctgggca 115 |||| |||||||| ||||| |||||||||||||| |||||||| Sbjct: 722117 catcttgtggtgctccaggaatgcagttatcatgttctgggca 722075 Score = 40.1 bits (20), Expect = 7.6 Identities = 59/72 (81%) Strand = Plus / Plus Query: 415 catacatatctgatcttccacgggactgcatggctgtttctaaaggcatccccgtaccct 474 ||||||| |||| |||||||| |||||||| | ||| | ||||||||||| |||||| Sbjct: 789289 catacatgtctgctcttccaccggactgcacagtggttgcgaaaggcatcccaataccct 789348 Query: 475 tcacttatgata 486 || |||||||| Sbjct: 789349 acaattatgata 789360 Score = 40.1 bits (20), Expect = 7.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 14 ccggtgcagcaaatatggacctgagatccggttccc 49 |||||||||||| ||||||| |||||||| ||||| Sbjct: 780567 ccggtgcagcaaggatggaccagagatccgtttccc 780602
>gb|AF238474.1|AF238474 Oryza sativa receptor-like kinase (RLG16) gene, complete cds Length = 4500 Score = 117 bits (59), Expect = 4e-23 Identities = 148/178 (83%) Strand = Plus / Plus Query: 1 cttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggcttt 60 |||||| |||||| ||||||||||| ||||||| |||||| ||| ||||||||| |||| Sbjct: 645 cttgttcatcccagcggtgcagcaagcatggaccagagatcaggtacccgttccgtcttt 704 Query: 61 tgagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgaca 120 || || || ||||| || ||||| || || ||||| |||||||||||||| || |||| Sbjct: 705 cgacacaacctccatcatgcggtgcacctggtatgcaattatcatgctctggacaagaca 764 Query: 121 caatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggca 178 | ||||| ||||||| ||||||||| ||||||| ||| ||| ||| ||||||||||| Sbjct: 765 ccatcctggatcaccctgttcttggttcctgcaaagtgaccatgatatattacaggca 822
>dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1212_B09 Length = 130728 Score = 117 bits (59), Expect = 4e-23 Identities = 148/178 (83%) Strand = Plus / Plus Query: 1 cttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggcttt 60 |||||| |||||| ||||||||||| ||||||| |||||| ||| ||||||||| |||| Sbjct: 46745 cttgttcatcccagcggtgcagcaagcatggaccagagatcaggtacccgttccgtcttt 46804 Query: 61 tgagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgaca 120 || || || ||||| || ||||| || || ||||| |||||||||||||| || |||| Sbjct: 46805 cgacacaacctccatcatgcggtgcacctggtatgcaattatcatgctctggacaagaca 46864 Query: 121 caatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggca 178 | ||||| ||||||| ||||||||| ||||||| ||| ||| ||| ||||||||||| Sbjct: 46865 ccatcctggatcaccctgttcttggttcctgcaaagtgaccatgatatattacaggca 46922 Score = 109 bits (55), Expect = 1e-20 Identities = 192/238 (80%) Strand = Plus / Plus Query: 2 ttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggctttt 61 ||||| ||| || |||||||||||| ||||||| || || |||||||| ||| |||||| Sbjct: 66076 ttgttcatcacagcggtgcagcaaacatggaccagatatacggttccccttcaggctttc 66135 Query: 62 gagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgacac 121 | |||| ||||| ||||| || ||||||||||| ||||||||||||||||| || Sbjct: 66136 aacccacgatccatcatgtggcatgcctggcatgcagttgtcatgctctgggcatgatac 66195 Query: 122 aatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggcaccg 181 |||||| ||||||| ||| | |||||||||| ||| |||| || ||||||||| |||| Sbjct: 66196 aatcctggatcaccctgtcttaggctcctgcaaagtgaccgcaatatattacaggtaccg 66255 Query: 182 tgtcatcaacatcatcccacttgtggaaccatcaacgcagtgcccatttcagaagctc 239 |||||| || ||||| ||||||||| ||||| | | |||||| ||||||||||| Sbjct: 66256 tgtcataaatgccatcctccttgtggaatcatcatcaaattgcccacttcagaagctc 66313 Score = 69.9 bits (35), Expect = 8e-09 Identities = 122/151 (80%) Strand = Plus / Plus Query: 16 ggtgcagcaaatatggacctgagatccggttcccgttccggcttttgagccacccaccat 75 |||||||||| ||||||| |||||| ||||||| |||||||| | || || || |||| Sbjct: 119858 ggtgcagcaagcatggaccagagatcaggttccctttccggctctcgacacaacctccat 119917 Query: 76 cgtgtggtgccccaggcatgcagttatcatgctctgggcatgacacaatccttgatcacc 135 | || || || || |||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct: 119918 catgcggcgcacccggcatgcacttgtcatgctctggacaggacaccatcctcaatcacc 119977 Query: 136 atgttcttggctcctgcagagttaccgagat 166 |||||||| |||||| ||| |||||||| Sbjct: 119978 cagttcttggtccctgcaaagtaaccgagat 120008 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 14 ccggtgcagcaaatatggacctgagatccggttccc 49 ||||||||||||| ||||||| |||||||||||||| Sbjct: 21898 ccggtgcagcaaacatggaccagagatccggttccc 21933 Score = 40.1 bits (20), Expect = 7.6 Identities = 59/72 (81%) Strand = Plus / Plus Query: 415 catacatatctgatcttccacgggactgcatggctgtttctaaaggcatccccgtaccct 474 ||||||| |||| |||||||| |||||||| | ||| | ||||||||||| |||||| Sbjct: 66489 catacatgtctgctcttccaccggactgcacagtggttgcgaaaggcatcccaataccct 66548 Query: 475 tcacttatgata 486 || |||||||| Sbjct: 66549 acaattatgata 66560 Score = 40.1 bits (20), Expect = 7.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 14 ccggtgcagcaaatatggacctgagatccggttccc 49 |||||||||||| ||||||| |||||||| ||||| Sbjct: 57767 ccggtgcagcaaggatggaccagagatccgtttccc 57802
>dbj|AK120121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025P07, full insert sequence Length = 3392 Score = 117 bits (59), Expect = 4e-23 Identities = 148/178 (83%) Strand = Plus / Plus Query: 1 cttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggcttt 60 |||||| |||||| ||||||||||| ||||||| |||||| ||| ||||||||| |||| Sbjct: 215 cttgttcatcccagcggtgcagcaagcatggaccagagatcaggtacccgttccgtcttt 274 Query: 61 tgagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgaca 120 || || || ||||| || ||||| || || ||||| |||||||||||||| || |||| Sbjct: 275 cgacacaacctccatcatgcggtgcacctggtatgcaattatcatgctctggacaagaca 334 Query: 121 caatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggca 178 | ||||| ||||||| ||||||||| ||||||| ||| ||| ||| ||||||||||| Sbjct: 335 ccatcctggatcaccctgttcttggttcctgcaaagtgaccatgatatattacaggca 392
>gb|AF164021.1|AF164021 Oryza sativa clone GRLG4 receptor kinase gene, complete cds Length = 5112 Score = 117 bits (59), Expect = 4e-23 Identities = 148/178 (83%) Strand = Plus / Plus Query: 1 cttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggcttt 60 |||||| |||||| ||||||||||| ||||||| |||||| ||| ||||||||| |||| Sbjct: 1538 cttgttcatcccagcggtgcagcaagcatggaccagagatcaggtacccgttccgtcttt 1597 Query: 61 tgagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgaca 120 || || || ||||| || ||||| || || ||||| |||||||||||||| || |||| Sbjct: 1598 cgacacaacctccatcatgcggtgcacctggtatgcaattatcatgctctggacaagaca 1657 Query: 121 caatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggca 178 | ||||| ||||||| ||||||||| ||||||| ||| ||| ||| ||||||||||| Sbjct: 1658 ccatcctggatcaccctgttcttggttcctgcaaagtgaccatgatatattacaggca 1715
>gb|AF248493.1|AF248493 Oryza sativa receptor-like kinase (RLG18) gene, complete cds Length = 4499 Score = 109 bits (55), Expect = 1e-20 Identities = 192/238 (80%) Strand = Plus / Plus Query: 2 ttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggctttt 61 ||||| ||| || |||||||||||| ||||||| || || |||||||| ||| |||||| Sbjct: 985 ttgttcatcacagcggtgcagcaaacatggaccagatatacggttccccttcaggctttc 1044 Query: 62 gagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgacac 121 | |||| ||||| ||||| || ||||||||||| ||||||||||||||||| || Sbjct: 1045 aacccacgatccatcatgtggcatgcctggcatgcagttgtcatgctctgggcatgatac 1104 Query: 122 aatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggcaccg 181 |||||| ||||||| ||| | |||||||||| ||| |||| || ||||||||| |||| Sbjct: 1105 aatcctggatcaccctgtcttaggctcctgcaaagtgaccgcaatatattacaggtaccg 1164 Query: 182 tgtcatcaacatcatcccacttgtggaaccatcaacgcagtgcccatttcagaagctc 239 |||||| || ||||| ||||||||| ||||| | | |||||| ||||||||||| Sbjct: 1165 tgtcataaatgccatcctccttgtggaatcatcatcaaattgcccacttcagaagctc 1222 Score = 40.1 bits (20), Expect = 7.6 Identities = 59/72 (81%) Strand = Plus / Plus Query: 415 catacatatctgatcttccacgggactgcatggctgtttctaaaggcatccccgtaccct 474 ||||||| |||| |||||||| |||||||| | ||| | ||||||||||| |||||| Sbjct: 1398 catacatgtctgctcttccaccggactgcacagtggttgcgaaaggcatcccaataccct 1457 Query: 475 tcacttatgata 486 || |||||||| Sbjct: 1458 acaattatgata 1469
>dbj|AP002867.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463F06 Length = 144322 Score = 109 bits (55), Expect = 1e-20 Identities = 192/238 (80%) Strand = Plus / Plus Query: 2 ttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggctttt 61 ||||| ||| || |||||||||||| ||||||| || || |||||||| ||| |||||| Sbjct: 11550 ttgttcatcacagcggtgcagcaaacatggaccagatatacggttccccttcaggctttc 11609 Query: 62 gagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgacac 121 | |||| ||||| ||||| || ||||||||||| ||||||||||||||||| || Sbjct: 11610 aacccacgatccatcatgtggcatgcctggcatgcagttgtcatgctctgggcatgatac 11669 Query: 122 aatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggcaccg 181 |||||| ||||||| ||| | |||||||||| ||| |||| || ||||||||| |||| Sbjct: 11670 aatcctggatcaccctgtcttaggctcctgcaaagtgaccgcaatatattacaggtaccg 11729 Query: 182 tgtcatcaacatcatcccacttgtggaaccatcaacgcagtgcccatttcagaagctc 239 |||||| || ||||| ||||||||| ||||| | | |||||| ||||||||||| Sbjct: 11730 tgtcataaatgccatcctccttgtggaatcatcatcaaattgcccacttcagaagctc 11787 Score = 101 bits (51), Expect = 2e-18 Identities = 146/178 (82%) Strand = Plus / Plus Query: 1 cttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggcttt 60 |||||| ||| || ||||||||||| ||||||| |||||| ||| |||||||||||||| Sbjct: 87743 cttgttcatcacatcggtgcagcaagcatggaccagagatcaggtacccgttccggcttt 87802 Query: 61 tgagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgaca 120 || || || ||||| || || || || || ||||| |||||||||||||| || |||| Sbjct: 87803 cgacacaacctccatcatgcggcgcacctgggatgcaattatcatgctctggacaagaca 87862 Query: 121 caatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggca 178 | ||||| ||||||| ||||||||| ||||||| ||| || ||| ||||||||||| Sbjct: 87863 ccatcctggatcaccctgttcttggttcctgcaaagtgacaatgatatattacaggca 87920 Score = 69.9 bits (35), Expect = 8e-09 Identities = 122/151 (80%) Strand = Plus / Plus Query: 16 ggtgcagcaaatatggacctgagatccggttcccgttccggcttttgagccacccaccat 75 |||||||||| ||||||| |||||| ||||||| |||||||| | || || || |||| Sbjct: 65332 ggtgcagcaagcatggaccagagatcaggttccctttccggctctcgacacaacctccat 65391 Query: 76 cgtgtggtgccccaggcatgcagttatcatgctctgggcatgacacaatccttgatcacc 135 | || || || || |||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct: 65392 catgcggcgcacccggcatgcacttgtcatgctctggacaggacaccatcctcaatcacc 65451 Query: 136 atgttcttggctcctgcagagttaccgagat 166 |||||||| |||||| ||| |||||||| Sbjct: 65452 cagttcttggtccctgcaaagtaaccgagat 65482 Score = 40.1 bits (20), Expect = 7.6 Identities = 59/72 (81%) Strand = Plus / Plus Query: 415 catacatatctgatcttccacgggactgcatggctgtttctaaaggcatccccgtaccct 474 ||||||| |||| |||||||| |||||||| | ||| | ||||||||||| |||||| Sbjct: 11963 catacatgtctgctcttccaccggactgcacagtggttgcgaaaggcatcccaataccct 12022 Query: 475 tcacttatgata 486 || |||||||| Sbjct: 12023 acaattatgata 12034 Score = 40.1 bits (20), Expect = 7.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 14 ccggtgcagcaaatatggacctgagatccggttccc 49 |||||||||||| ||||||| |||||||| ||||| Sbjct: 3241 ccggtgcagcaaggatggaccagagatccgtttccc 3276
>gb|AF238471.1|AF238471 Oryza sativa receptor-like kinase (RLG10) gene, complete cds Length = 5000 Score = 103 bits (52), Expect = 6e-19 Identities = 193/239 (80%), Gaps = 1/239 (0%) Strand = Plus / Minus Query: 2 ttgttnatcccaccggtgcagcaaatatggacctgagat-ccggttcccgttccggcttt 60 ||||| ||| || |||||||||||| ||||||| || || ||||||||| ||| |||||| Sbjct: 516 ttgttcatcacagcggtgcagcaaacatggaccagatataccggttccccttcaggcttt 457 Query: 61 tgagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgaca 120 | |||| ||||| ||||| || ||||||||||| ||||||||||||||||| | Sbjct: 456 caacccacgatccatcatgtggcatgcctggcatgcagttgtcatgctctgggcatgata 397 Query: 121 caatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggcacc 180 ||||||| ||||||| ||| | |||||||||| ||| |||| || ||||||||| ||| Sbjct: 396 caatcctggatcaccctgtcttaggctcctgcaaagtgaccgcaatatattacaggtacc 337 Query: 181 gtgtcatcaacatcatcccacttgtggaaccatcaacgcagtgcccatttcagaagctc 239 ||||||| || ||||| ||||||||| ||||| | | |||||| ||||||||||| Sbjct: 336 gtgtcataaatgccatcctccttgtggaatcatcatcaaattgcccacttcagaagctc 278 Score = 40.1 bits (20), Expect = 7.6 Identities = 59/72 (81%) Strand = Plus / Minus Query: 415 catacatatctgatcttccacgggactgcatggctgtttctaaaggcatccccgtaccct 474 ||||||| |||| |||||||| |||||||| | ||| | ||||||||||| |||||| Sbjct: 102 catacatgtctgctcttccaccggactgcacagtggttgcgaaaggcatcccaataccct 43 Query: 475 tcacttatgata 486 || |||||||| Sbjct: 42 acaattatgata 31
>ref|XM_549899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 847 Score = 101 bits (51), Expect = 2e-18 Identities = 125/150 (83%) Strand = Plus / Minus Query: 1 cttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggcttt 60 |||||| |||||| ||||||||||| ||||||| |||||| ||| ||||||||| |||| Sbjct: 586 cttgttcatcccagcggtgcagcaagcatggaccagagatcaggtacccgttccgtcttt 527 Query: 61 tgagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgaca 120 || || || ||||| || ||||| || || ||||| |||||||||||||| || |||| Sbjct: 526 cgacacaacctccatcatgcggtgcacctggtatgcaattatcatgctctggacaagaca 467 Query: 121 caatccttgatcaccatgttcttggctcct 150 | ||||| ||||||| ||||||||| |||| Sbjct: 466 ccatcctggatcaccctgttcttggttcct 437
>gb|AF237568.1|AF237568 Oryza sativa receptor-like protein kinase (RLG2) gene, complete cds Length = 4000 Score = 101 bits (51), Expect = 2e-18 Identities = 146/178 (82%) Strand = Plus / Plus Query: 1 cttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggcttt 60 |||||| ||| || ||||||||||| ||||||| |||||| ||| |||||||||||||| Sbjct: 485 cttgttcatcacatcggtgcagcaagcatggaccagagatcaggtacccgttccggcttt 544 Query: 61 tgagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgaca 120 || || || ||||| || || || || || ||||| |||||||||||||| || |||| Sbjct: 545 cgacacaacctccatcatgcggcgcacctgggatgcaattatcatgctctggacaagaca 604 Query: 121 caatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggca 178 | ||||| ||||||| ||||||||| ||||||| ||| || ||| ||||||||||| Sbjct: 605 ccatcctggatcaccctgttcttggttcctgcaaagtgacaatgatatattacaggca 662
>dbj|AP002747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698G03 Length = 147857 Score = 101 bits (51), Expect = 2e-18 Identities = 146/178 (82%) Strand = Plus / Plus Query: 1 cttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggcttt 60 |||||| ||| || ||||||||||| ||||||| |||||| ||| |||||||||||||| Sbjct: 514 cttgttcatcacatcggtgcagcaagcatggaccagagatcaggtacccgttccggcttt 573 Query: 61 tgagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgaca 120 || || || ||||| || || || || || ||||| |||||||||||||| || |||| Sbjct: 574 cgacacaacctccatcatgcggcgcacctgggatgcaattatcatgctctggacaagaca 633 Query: 121 caatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggca 178 | ||||| ||||||| ||||||||| ||||||| ||| || ||| ||||||||||| Sbjct: 634 ccatcctggatcaccctgttcttggttcctgcaaagtgacaatgatatattacaggca 691 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 222 tgcccatttcagaagctcatctcagcaaacttagcaactgatgtgtacaaac 273 |||||| |||||||||||||||| |||| ||| |||||||||||||||||| Sbjct: 59208 tgcccacttcagaagctcatctcgacaaatttatcaactgatgtgtacaaac 59259
>dbj|AK099453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022K11, full insert sequence Length = 847 Score = 101 bits (51), Expect = 2e-18 Identities = 125/150 (83%) Strand = Plus / Minus Query: 1 cttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggcttt 60 |||||| |||||| ||||||||||| ||||||| |||||| ||| ||||||||| |||| Sbjct: 586 cttgttcatcccagcggtgcagcaagcatggaccagagatcaggtacccgttccgtcttt 527 Query: 61 tgagccacccaccatcgtgtggtgccccaggcatgcagttatcatgctctgggcatgaca 120 || || || ||||| || ||||| || || ||||| |||||||||||||| || |||| Sbjct: 526 cgacacaacctccatcatgcggtgcacctggtatgcaattatcatgctctggacaagaca 467 Query: 121 caatccttgatcaccatgttcttggctcct 150 | ||||| ||||||| ||||||||| |||| Sbjct: 466 ccatcctggatcaccctgttcttggttcct 437
>gb|AF085169.1|AF085169 Triticum aestivum ARK protein and LRk-type protein genes, partial cds Length = 3919 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Plus Query: 15 cggtgcagcaaatatggacctgagatccggttcccgttccggcttttgagccacccacca 74 |||||||||||| ||||||| ||| |||||||||| ||| ||||| | ||| || ||| Sbjct: 3636 cggtgcagcaaacatggaccagaggtccggttcccattcaggcttgcaacccaacctcca 3695 Query: 75 tcgtgtggtgccccaggcatgcagttatcatgctctgggcatgacacaatccttgatcac 134 | |||||||| ||||| |||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 3696 ccttgtggtgcaccaggtatgcagttatcatgctctggacaggacaccatcctgtatcac 3755 Query: 135 catgttcttggctcctgca 153 | |||||||||||||||| Sbjct: 3756 ccagttcttggctcctgca 3774 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 222 tgcccatttcagaagctcatctcagcaaacttagcaactgatgtgtacaaac 273 |||||| |||||| |||||||||||||| || |||||||||||||||||| Sbjct: 3843 tgcccacttcagatactcatctcagcaaatctatcaactgatgtgtacaaac 3894
>ref|NM_184075.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2005 Score = 69.9 bits (35), Expect = 8e-09 Identities = 122/151 (80%) Strand = Plus / Plus Query: 16 ggtgcagcaaatatggacctgagatccggttcccgttccggcttttgagccacccaccat 75 |||||||||| ||||||| |||||| ||||||| |||||||| | || || || |||| Sbjct: 130 ggtgcagcaagcatggaccagagatcaggttccctttccggctctcgacacaacctccat 189 Query: 76 cgtgtggtgccccaggcatgcagttatcatgctctgggcatgacacaatccttgatcacc 135 | || || || || |||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct: 190 catgcggcgcacccggcatgcacttgtcatgctctggacaggacaccatcctcaatcacc 249 Query: 136 atgttcttggctcctgcagagttaccgagat 166 |||||||| |||||| ||| |||||||| Sbjct: 250 cagttcttggtccctgcaaagtaaccgagat 280
>dbj|AK121074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061O14, full insert sequence Length = 2005 Score = 69.9 bits (35), Expect = 8e-09 Identities = 122/151 (80%) Strand = Plus / Plus Query: 16 ggtgcagcaaatatggacctgagatccggttcccgttccggcttttgagccacccaccat 75 |||||||||| ||||||| |||||| ||||||| |||||||| | || || || |||| Sbjct: 130 ggtgcagcaagcatggaccagagatcaggttccctttccggctctcgacacaacctccat 189 Query: 76 cgtgtggtgccccaggcatgcagttatcatgctctgggcatgacacaatccttgatcacc 135 | || || || || |||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct: 190 catgcggcgcacccggcatgcacttgtcatgctctggacaggacaccatcctcaatcacc 249 Query: 136 atgttcttggctcctgcagagttaccgagat 166 |||||||| |||||| ||| |||||||| Sbjct: 250 cagttcttggtccctgcaaagtaaccgagat 280
>gb|AF100764.1|AF100764 Oryza sativa OS8LRK pseudogene sequence Length = 3590 Score = 69.9 bits (35), Expect = 8e-09 Identities = 146/181 (80%), Gaps = 3/181 (1%) Strand = Plus / Plus Query: 1 cttgttnatcccaccggtgcagcaaatatggacctgagatccggttcccgttccggcttt 60 |||||| ||| || ||||||||||| ||||||| |||||| ||| |||||||||||||| Sbjct: 483 cttgttcatcacatcggtgcagcaagcatggaccagagatcaggtacccgttccggcttt 542 Query: 61 tgagccacccaccatcgtgtggtgccccaggcatgc--agttat-catgctctgggcatg 117 || || || ||||| || || || || || |||| | |||| |||||||||| || | Sbjct: 543 cgacacaacctccatcatgcggcgcacctgggatgcaaatttatccatgctctggacaag 602 Query: 118 acacaatccttgatcaccatgttcttggctcctgcagagttaccgagatctattacaggc 177 |||| ||||| ||||||| ||||||||| ||||||| ||| || ||| |||||||||| Sbjct: 603 acaccatcctggatcaccctgttcttggttcctgcaaagtgacaatgatatattacaggc 662 Query: 178 a 178 | Sbjct: 663 a 663
>ref|NM_184059.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2400 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 14 ccggtgcagcaaatatggacctgagatccggttccc 49 ||||||||||||| ||||||| |||||||||||||| Sbjct: 248 ccggtgcagcaaacatggaccagagatccggttccc 283
>gb|AF238476.1|AF238476 Oryza sativa receptor-like kinase (RLG11) gene, complete cds Length = 3628 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 14 ccggtgcagcaaatatggacctgagatccggttccc 49 ||||||||||||| ||||||| |||||||||||||| Sbjct: 805 ccggtgcagcaaacatggaccagagatccggttccc 770
>dbj|AK111700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005G06, full insert sequence Length = 2400 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 14 ccggtgcagcaaatatggacctgagatccggttccc 49 ||||||||||||| ||||||| |||||||||||||| Sbjct: 248 ccggtgcagcaaacatggaccagagatccggttccc 283
>ref|NM_183554.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1854 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 73 catcgtgtggtgccccaggcatgcagttatcatgctctgggca 115 |||| |||||||| ||||| |||||||||||||| |||||||| Sbjct: 167 catcttgtggtgctccaggaatgcagttatcatgttctgggca 209
>gb|AF044260.1| Oryza sativa (japonica cultivar-group) clone OsRLK8 receptor serine/threonine kinase mRNA, complete cds Length = 2092 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 73 catcgtgtggtgccccaggcatgcagttatcatgctctgggca 115 |||| |||||||| ||||| |||||||||||||| |||||||| Sbjct: 172 catcttgtggtgctccaggaatgcagttatcatgttctgggca 214
>gb|AF077130.1| Oryza sativa (indica cultivar-group) clone OsGRLK8 receptor-like protein kinase gene, complete cds Length = 4392 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 73 catcgtgtggtgccccaggcatgcagttatcatgctctgggca 115 |||| |||||||| ||||| |||||||||||||| |||||||| Sbjct: 1880 catcttgtggtgctccaggaatgcagttatcatgttctgggca 1922
>dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032H19 Length = 126434 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 73 catcgtgtggtgccccaggcatgcagttatcatgctctgggca 115 |||| |||||||| ||||| |||||||||||||| |||||||| Sbjct: 105861 catcttgtggtgctccaggaatgcagttatcatgttctgggca 105819
>gb|AY029703.1| Triticum aestivum receptor-like kinase (Rlk-R1) gene, partial cds Length = 2125 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 103 catgctctgggcatgacacaatccttgatcaccatgttcttggctc 148 ||||||||||||| ||||| ||||| | ||||| ||||||||||| Sbjct: 1 catgctctgggcaagacaccatcctagttcacccagttcttggctc 46
>gb|AC147712.17| Medicago truncatula clone mth2-34f1, complete sequence Length = 136410 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 254 agcaactgatgtgtacaaacaacct 278 |||||||||||||||||| |||||| Sbjct: 73238 agcaactgatgtgtacaaccaacct 73262
>emb|AL928621.16| Mouse DNA sequence from clone RP23-401G6 on chromosome 2, complete sequence Length = 174248 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gcaaatatggacctgagatcc 42 ||||||||||||||||||||| Sbjct: 169977 gcaaatatggacctgagatcc 169957
>gb|AC146328.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0018J01, complete sequence Length = 82510 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cttgatcaccatgttcttgg 145 |||||||||||||||||||| Sbjct: 27970 cttgatcaccatgttcttgg 27989
>emb|AL354999.17| Human DNA sequence from clone RP11-531B22 on chromosome 13, complete sequence Length = 82944 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 acccaccatcgtgtggtgcc 86 |||||||||||||||||||| Sbjct: 67038 acccaccatcgtgtggtgcc 67019
>emb|AL161722.9| Human DNA sequence from clone RP11-497J7 on chromosome X Contains a melanoma antigen family B 4 pseudogene and a nuclear transcription factor Y, gamma (NFYC) pseudogene, complete sequence Length = 154594 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttgttcaagagatttcacac 330 |||||||||||||||||||| Sbjct: 58884 ttgttcaagagatttcacac 58903
>emb|BX510914.13| Zebrafish DNA sequence from clone DKEY-4D9 in linkage group 2, complete sequence Length = 108843 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tttcacaccagtagatcaat 342 |||||||||||||||||||| Sbjct: 1713 tttcacaccagtagatcaat 1694
>gb|AC019089.6| Homo sapiens BAC clone RP11-370L14 from 4, complete sequence Length = 177160 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tagccaattctggtatatgg 402 |||||||||||||||||||| Sbjct: 154453 tagccaattctggtatatgg 154472
>dbj|AB177878.1| Python regius mitochondrial DNA, complete genome Length = 17245 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gtcatcaacatcatcccact 202 |||||||||||||||||||| Sbjct: 13200 gtcatcaacatcatcccact 13219
>emb|BX469891.9| Zebrafish DNA sequence from clone CH211-226B21 in linkage group 2, complete sequence Length = 175261 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tttcacaccagtagatcaat 342 |||||||||||||||||||| Sbjct: 174974 tttcacaccagtagatcaat 174955
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cttgatcaccatgttcttgg 145 |||||||||||||||||||| Sbjct: 4192840 cttgatcaccatgttcttgg 4192821
>gb|AF315326.1|AF315326 Brassica napus profilin mRNA, complete cds Length = 672 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 gatcaccatgttcttggctcctgc 152 ||||||||||| |||||||||||| Sbjct: 282 gatcaccatgtacttggctcctgc 259
>gb|AF238472.1|AF238472 Oryza sativa receptor-like kinase (RLG15) gene, complete cds Length = 5001 Score = 40.1 bits (20), Expect = 7.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 14 ccggtgcagcaaatatggacctgagatccggttccc 49 |||||||||||| ||||||| |||||||| ||||| Sbjct: 1173 ccggtgcagcaaggatggaccagagatccgtttccc 1208
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cttgatcaccatgttcttgg 145 |||||||||||||||||||| Sbjct: 4201534 cttgatcaccatgttcttgg 4201515 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,233,220 Number of Sequences: 3902068 Number of extensions: 4233220 Number of successful extensions: 69009 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68794 Number of HSP's gapped (non-prelim): 205 length of query: 559 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 536 effective length of database: 17,143,297,704 effective search space: 9188807569344 effective search space used: 9188807569344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)