Clone Information

BLAST Search Result

Clone Name	baal26d20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL27C_ARATH (P49637) 60S ribosomal protein L27a-3	216	2e-56
2	RL27A_ARATH (Q9LR33) 60S ribosomal protein L27a-2	214	7e-56
3	RL27A_OSCBR (O01358) 60S ribosomal protein L27a (Ribosomal prote...	188	4e-48
4	RL27A_RAT (P18445) 60S ribosomal protein L27a	181	7e-46
5	RL27A_PONPY (Q5REY2) 60S ribosomal protein L27a	179	3e-45
6	RL27A_PANTR (Q5R1X0) 60S ribosomal protein L27a	179	3e-45
7	RL27A_HUMAN (P46776) 60S ribosomal protein L27a	179	3e-45
8	RL27A_MOUSE (P14115) 60S ribosomal protein L27a (L29)	178	4e-45
9	RL27A_ERYGR (P78987) 60S ribosomal protein L27a (L29)	177	7e-45
10	RL27A_DROME (P41092) 60S ribosomal protein L27a	176	2e-44
11	RL27A_DICDI (P48160) 60S ribosomal protein L27a	176	3e-44
12	RL27A_XENLA (P47830) 60S ribosomal protein L27a (L22)	173	2e-43
13	RL28_NEUCR (P08978) 60S ribosomal protein L28 (L27A) (L29) (CRP1)	169	3e-42
14	RL28_YEAST (P02406) 60S ribosomal protein L28 (L27A) (L29) (YL24...	169	3e-42
15	RL28A_SCHPO (P36585) 60S ribosomal protein L28-A (L27A) (L29)	167	1e-41
16	RL28B_SCHPO (P57728) 60S ribosomal protein L28-B	164	6e-41
17	RL27A_EUPCR (P48161) 60S ribosomal protein L27a (L29)	163	2e-40
18	RL27A_TETTH (Q00454) 60S ribosomal protein L27a (L29)	160	9e-40
19	R27A2_ENTHI (Q9BH80) 60S ribosomal protein L27a-2/4	156	2e-38
20	R27A1_ENTHI (Q9BI06) 60S ribosomal protein L27a-1	156	2e-38
21	RL27A_TENMO (Q27021) 60S ribosomal protein L27a	155	3e-38
22	R27A3_ENTHI (Q9BI14) 60S ribosomal protein L27a-3	155	5e-38
23	RL27A_TRYBB (O15883) 60S ribosomal protein L27a (L29)	142	3e-34
24	RL27A_ENCCU (O62581) 60S ribosomal protein L27a	135	5e-32
25	RL27A_PIG (Q29333) 60S ribosomal protein L27a (Fragment)	101	9e-22
26	RL15_METVA (P14032) 50S ribosomal protein L15P	69	5e-12
27	RL15_METMP (Q6LXD1) 50S ribosomal protein L15P	69	5e-12
28	RL15_METTH (O26133) 50S ribosomal protein L15P	68	1e-11
29	RL15_METJA (P54047) 50S ribosomal protein L15P	67	2e-11
30	RL15_SULAC (O05643) 50S ribosomal protein L15P	56	3e-08
31	RL15_SULSO (Q9UX85) 50S ribosomal protein L15P	51	1e-06
32	RL15_AERPE (Q9YF98) 50S ribosomal protein L15P	47	2e-05
33	RL15_THEVO (Q97BV4) 50S ribosomal protein L15P	46	4e-05
34	RL15_PYRAE (Q8ZT50) 50S ribosomal protein L15P	45	6e-05
35	RL28_CANAL (P47831) 60S ribosomal protein L28 (L27A) (L29) (Frag...	44	1e-04
36	RL15_THEAC (Q9HIS9) 50S ribosomal protein L15P	44	2e-04
37	YGK2_YEAST (P53143) Hypothetical 16.2 kDa protein in RPL28-SEH1 ...	40	0.002
38	RL15_HALMA (P12737) 50S ribosomal protein L15P (Hmal15) (Hl9)	39	0.005
39	RL15_METAC (Q8TRS5) 50S ribosomal protein L15P	35	0.058
40	RL15_NATPD (Q3IMW6) 50S ribosomal protein L15P	35	0.058
41	RL15_METMA (Q8PV28) 50S ribosomal protein L15P	35	0.098
42	PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regu...	32	0.83
43	PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regu...	32	0.83
44	PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regu...	32	0.83
45	PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regula...	31	1.4
46	AXN1_HUMAN (O15169) Axin-1 (Axis inhibition protein 1) (hAxin)	30	1.9
47	CUO5_BLACR (P82118) Cuticle protein 5 (BcNCP14.6)	30	1.9
48	DBP9_NEUCR (Q7S6F3) ATP-dependent RNA helicase dbp-9 (EC 3.6.1.-)	30	2.4
49	ANTP_DROME (P02833) Homeotic protein antennapedia	30	3.2
50	PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regu...	29	4.1
51	YGFU_ECOLI (Q46821) Putative purine permease ygfU	29	4.1
52	DNJ10_CAEEL (Q8TA83) DnaJ homolog dnj-10 (DnaJ domain protein 10)	29	5.4
53	MAF_AVIS4 (P23091) Transforming protein Maf	28	7.1
54	RBBP6_MOUSE (P97868) Retinoblastoma-binding protein 6 (p53-assoc...	28	7.1
55	ENGC_XANCP (Q8P5H9) Probable GTPase engC (EC 3.6.1.-)	28	7.1
56	AXN1_BRARE (P57094) Axin-1 (Axis inhibition protein 1)	28	7.1
57	COX2_CULQU (P50693) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) ...	28	9.2
58	IF2_CORDI (Q6NGN2) Translation initiation factor IF-2	28	9.2
59	XRN1_HUMAN (Q8IZH2) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (Stran...	28	9.2
60	SALA_DROME (P21750) Protein spalt-accessory precursor (Protein s...	28	9.2
61	UCRQ_NEUCR (P48503) Ubiquinol-cytochrome c reductase complex ubi...	28	9.2
62	RL3_SPIKU (P60457) 50S ribosomal protein L3	28	9.2
63	UREE_BORPE (Q7VUD4) Urease accessory protein ureE	28	9.2
64	UREE_BORPA (Q7W418) Urease accessory protein ureE	28	9.2
65	UREE_BORBR (Q7WFF2) Urease accessory protein ureE	28	9.2
66	SALA_DROSI (P21749) Protein spalt-accessory precursor	28	9.2

>RL27C_ARATH (P49637) 60S ribosomal protein L27a-3|
          Length = 146

 Score =  216 bits (550), Expect = 2e-56
 Identities = 98/126 (77%), Positives = 111/126 (88%), Gaps = 1/126 (0%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           MTTR KKNRKKRGHVSAGHGR+GKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGMLPE-KPI 409
           FHKL N+F+ P VN+++LWS+VP D  A++  D  P++DV+Q G+FKVLGKG LPE KP 
Sbjct: 61  FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120

Query: 410 VVKAKL 427
           VVKAKL
Sbjct: 121 VVKAKL 126

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>RL27A_ARATH (Q9LR33) 60S ribosomal protein L27a-2|
          Length = 146

 Score =  214 bits (545), Expect = 7e-56
 Identities = 97/126 (76%), Positives = 110/126 (87%), Gaps = 1/126 (0%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           M T LKKNRKKRGHVSAGHGR+GKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGMLPE-KPI 409
           FHKL N+F+ P VN+++LWS+VP D  A++  D  P++DV+Q G+FKVLGKG LPE KP 
Sbjct: 61  FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120

Query: 410 VVKAKL 427
           VVKAKL
Sbjct: 121 VVKAKL 126

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>RL27A_OSCBR (O01358) 60S ribosomal protein L27a (Ribosomal protein RPL-27)|
          Length = 145

 Score =  188 bits (478), Expect = 4e-48
 Identities = 83/124 (66%), Positives = 99/124 (79%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           M   L+K RK RGHVS GHGR+GKHRKHPGGRGNAGG HHHRI  DKYHPGYFGKVGMR 
Sbjct: 1   MAHSLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRV 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGMLPEKPIV 412
           FH   N  Y PTVNV+RLW++VP ++  +   +KAPV+D  + GYFKVLGKG+LP++P++
Sbjct: 61  FHLNKNHHYCPTVNVDRLWALVPEEQKTKVSAEKAPVIDCVKAGYFKVLGKGLLPKQPLI 120

Query: 413 VKAK 424
           VKAK
Sbjct: 121 VKAK 124

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>RL27A_RAT (P18445) 60S ribosomal protein L27a|
          Length = 147

 Score =  181 bits (459), Expect = 7e-46
 Identities = 80/125 (64%), Positives = 101/125 (80%), Gaps = 3/125 (2%)
 Frame = +2

Query: 59  TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 238
           +RL+K RK RGHVS GHGR+GKHRKHPGGRGNAGGMHHHRI FDKYHPGYFGKVGMR++H
Sbjct: 2   SRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYH 61

Query: 239 KLSNRFYTPTVNVERLWSMVPSDKAAEAGGDK---APVVDVSQFGYFKVLGKGMLPEKPI 409
              N+ + PTVN+++LW++V       A  +K   AP++DV + GY+KVLGKG LP++P+
Sbjct: 62  LKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRSGYYKVLGKGKLPKQPV 121

Query: 410 VVKAK 424
           +VKAK
Sbjct: 122 IVKAK 126

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>RL27A_PONPY (Q5REY2) 60S ribosomal protein L27a|
          Length = 147

 Score =  179 bits (453), Expect = 3e-45
 Identities = 78/125 (62%), Positives = 101/125 (80%), Gaps = 3/125 (2%)
 Frame = +2

Query: 59  TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 238
           +RL+K RK RGHVS GHGR+GKHRKHPGGRGNAGG+HHHRI FDKYHPGYFGKVGM+++H
Sbjct: 2   SRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYH 61

Query: 239 KLSNRFYTPTVNVERLWSMVPSDKAAEAGGDK---APVVDVSQFGYFKVLGKGMLPEKPI 409
              N+ + PTVN+++LW++V       A  +K   AP++DV + GY+KVLGKG LP++P+
Sbjct: 62  LKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPV 121

Query: 410 VVKAK 424
           +VKAK
Sbjct: 122 IVKAK 126

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>RL27A_PANTR (Q5R1X0) 60S ribosomal protein L27a|
          Length = 147

 Score =  179 bits (453), Expect = 3e-45
 Identities = 78/125 (62%), Positives = 101/125 (80%), Gaps = 3/125 (2%)
 Frame = +2

Query: 59  TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 238
           +RL+K RK RGHVS GHGR+GKHRKHPGGRGNAGG+HHHRI FDKYHPGYFGKVGM+++H
Sbjct: 2   SRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYH 61

Query: 239 KLSNRFYTPTVNVERLWSMVPSDKAAEAGGDK---APVVDVSQFGYFKVLGKGMLPEKPI 409
              N+ + PTVN+++LW++V       A  +K   AP++DV + GY+KVLGKG LP++P+
Sbjct: 62  LKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPV 121

Query: 410 VVKAK 424
           +VKAK
Sbjct: 122 IVKAK 126

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>RL27A_HUMAN (P46776) 60S ribosomal protein L27a|
          Length = 147

 Score =  179 bits (453), Expect = 3e-45
 Identities = 78/125 (62%), Positives = 101/125 (80%), Gaps = 3/125 (2%)
 Frame = +2

Query: 59  TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 238
           +RL+K RK RGHVS GHGR+GKHRKHPGGRGNAGG+HHHRI FDKYHPGYFGKVGM+++H
Sbjct: 2   SRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYH 61

Query: 239 KLSNRFYTPTVNVERLWSMVPSDKAAEAGGDK---APVVDVSQFGYFKVLGKGMLPEKPI 409
              N+ + PTVN+++LW++V       A  +K   AP++DV + GY+KVLGKG LP++P+
Sbjct: 62  LKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPV 121

Query: 410 VVKAK 424
           +VKAK
Sbjct: 122 IVKAK 126

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>RL27A_MOUSE (P14115) 60S ribosomal protein L27a (L29)|
          Length = 147

 Score =  178 bits (452), Expect = 4e-45
 Identities = 79/125 (63%), Positives = 100/125 (80%), Gaps = 3/125 (2%)
 Frame = +2

Query: 59  TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 238
           +RL+K RK RGHVS GHGR+GKHRKHPGGRGNAGGMHHHRI FDKYHPGYFGKVGMR++H
Sbjct: 2   SRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYH 61

Query: 239 KLSNRFYTPTVNVERLWSMVPSDKAAEAGGDK---APVVDVSQFGYFKVLGKGMLPEKPI 409
              N+ + PTVN+++ W++V       A  +K   AP++DV + GY+KVLGKG LP++P+
Sbjct: 62  LKRNQSFCPTVNLDKPWTLVSEQTRVNAAKNKTGVAPIIDVVRSGYYKVLGKGKLPKQPV 121

Query: 410 VVKAK 424
           +VKAK
Sbjct: 122 IVKAK 126

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>RL27A_ERYGR (P78987) 60S ribosomal protein L27a (L29)|
          Length = 149

 Score =  177 bits (450), Expect = 7e-45
 Identities = 80/128 (62%), Positives = 96/128 (75%), Gaps = 4/128 (3%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           M T L K RK RGHVSAGHGRVGKHRKHPGGRG AGG HHHR   DKYHPGYFGKVGMRY
Sbjct: 1   MPTHLSKTRKHRGHVSAGHGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHPGYFGKVGMRY 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPSDK----AAEAGGDKAPVVDVSQFGYFKVLGKGMLPE 400
           FHK  N F+ P +N+E+LWS++P++K     +    D  PV+D+   GY KVLGKG +P+
Sbjct: 61  FHKQGNHFWKPVLNLEKLWSLIPAEKREAYLSSTNPDVIPVIDLLPLGYSKVLGKGRIPK 120

Query: 401 KPIVVKAK 424
            P+VV+A+
Sbjct: 121 VPLVVRAR 128

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>RL27A_DROME (P41092) 60S ribosomal protein L27a|
          Length = 149

 Score =  176 bits (447), Expect = 2e-44
 Identities = 79/122 (64%), Positives = 98/122 (80%), Gaps = 3/122 (2%)
 Frame = +2

Query: 68  KKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLS 247
           KK RK RGHVS GHGR+GKHRKHPGGRGNAGGMHHHRI FDKYHPGYFGKVGMR FH   
Sbjct: 7   KKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRR 66

Query: 248 NRFYTPTVNVERLWSMVPSDKAAEAGGD---KAPVVDVSQFGYFKVLGKGMLPEKPIVVK 418
              + P +N+++LWS+V ++K AE   +   KAPV+D+ +FGY+K+LG+G LP +P++VK
Sbjct: 67  QHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVK 126

Query: 419 AK 424
           AK
Sbjct: 127 AK 128

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>RL27A_DICDI (P48160) 60S ribosomal protein L27a|
          Length = 148

 Score =  176 bits (445), Expect = 3e-44
 Identities = 82/127 (64%), Positives = 103/127 (81%), Gaps = 3/127 (2%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           M TR  K+RK RG V AG+GRVGKHRKHPGGRGNAGG+ HHRI FDKYHPGYFGK+GMR+
Sbjct: 1   MPTRFSKHRKSRGDVCAGYGRVGKHRKHPGGRGNAGGLTHHRINFDKYHPGYFGKLGMRH 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPSD--KAAEAGGD-KAPVVDVSQFGYFKVLGKGMLPEK 403
           FH L N+++ PTV++E++W++VP    K+  A  D  APVVDV+Q G+FKVLG G+LP +
Sbjct: 61  FHLLRNQYHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFFKVLGHGILPTQ 120

Query: 404 PIVVKAK 424
           PI+VKA+
Sbjct: 121 PIIVKAR 127

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>RL27A_XENLA (P47830) 60S ribosomal protein L27a (L22)|
          Length = 147

 Score =  173 bits (438), Expect = 2e-43
 Identities = 76/125 (60%), Positives = 98/125 (78%), Gaps = 3/125 (2%)
 Frame = +2

Query: 59  TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 238
           ++L+K RK RGHVS GHGR+GKHRKHPGGRGNAGGMHHHRI FDKYHPGYFGKVGMR++H
Sbjct: 2   SKLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYH 61

Query: 239 KLSNRFYTPTVNVERLWSMVPSD---KAAEAGGDKAPVVDVSQFGYFKVLGKGMLPEKPI 409
              N+ + PT+N+++LW++V        A+     AP++D    GY+KVLGKG LP++P+
Sbjct: 62  LKKNQSFCPTINLDKLWTLVSEQTRLNHAKNLEGPAPIIDAVHAGYYKVLGKGKLPKQPV 121

Query: 410 VVKAK 424
           +VKAK
Sbjct: 122 IVKAK 126

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>RL28_NEUCR (P08978) 60S ribosomal protein L28 (L27A) (L29) (CRP1)|
          Length = 149

 Score =  169 bits (428), Expect = 3e-42
 Identities = 78/128 (60%), Positives = 95/128 (74%), Gaps = 4/128 (3%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           M TR  K RK RGHVSAG GRVGKHRKHPGGRG AGG HHHR   DKYHPGYFGKVGMR+
Sbjct: 1   MPTRFSKTRKHRGHVSAGKGRVGKHRKHPGGRGMAGGQHHHRTNLDKYHPGYFGKVGMRH 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPSDK----AAEAGGDKAPVVDVSQFGYFKVLGKGMLPE 400
           FH L N  + P +N+E+LW++VP++      + A  + APV+D+   GY K+LGKG LP+
Sbjct: 61  FHLLRNHQWAPILNIEKLWTLVPAEAREKYVSGAATETAPVIDLLSHGYAKLLGKGRLPQ 120

Query: 401 KPIVVKAK 424
            PIVV+A+
Sbjct: 121 VPIVVRAR 128

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>RL28_YEAST (P02406) 60S ribosomal protein L28 (L27A) (L29) (YL24) (RP62)|
          Length = 148

 Score =  169 bits (427), Expect = 3e-42
 Identities = 75/126 (59%), Positives = 93/126 (73%), Gaps = 4/126 (3%)
 Frame = +2

Query: 59  TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 238
           +R  K RK RGHVSAG GR+GKHRKHPGGRG AGG HHHRI  DKYHPGYFGKVGMRYFH
Sbjct: 2   SRFTKTRKHRGHVSAGKGRIGKHRKHPGGRGMAGGEHHHRINMDKYHPGYFGKVGMRYFH 61

Query: 239 KLSNRFYTPTVNVERLWSMVPSDKAAE----AGGDKAPVVDVSQFGYFKVLGKGMLPEKP 406
           K    F+ P +N+++LW+++P DK  +    A  + APV+D    GY K+LGKG +P  P
Sbjct: 62  KQQAHFWKPVLNLDKLWTLIPEDKRDQYLKSASKETAPVIDTLAAGYGKILGKGRIPNVP 121

Query: 407 IVVKAK 424
           ++VKA+
Sbjct: 122 VIVKAR 127

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>RL28A_SCHPO (P36585) 60S ribosomal protein L28-A (L27A) (L29)|
          Length = 148

 Score =  167 bits (422), Expect = 1e-41
 Identities = 77/127 (60%), Positives = 95/127 (74%), Gaps = 3/127 (2%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           M T + K RK RGHVSAGHGR+GKHRKHPGGRG AGG+ H R  FDKYHPGYFGKVGMR 
Sbjct: 1   MPTHVSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRR 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPS---DKAAEAGGDKAPVVDVSQFGYFKVLGKGMLPEK 403
           FH + N  + PTVN++RLW+++P+   DK      + APV++V Q GY KVLGKG LPE 
Sbjct: 61  FHLMKNPLWRPTVNLDRLWTLLPNEARDKYLGKNTEVAPVINVLQSGYGKVLGKGRLPET 120

Query: 404 PIVVKAK 424
           P++V+ +
Sbjct: 121 PVIVQTR 127

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>RL28B_SCHPO (P57728) 60S ribosomal protein L28-B|
          Length = 148

 Score =  164 bits (416), Expect = 6e-41
 Identities = 75/127 (59%), Positives = 95/127 (74%), Gaps = 3/127 (2%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           M T   K RK RGHVSAGHGR+GKHRKHPGGRG AGG+ H R  FDKYHPGYFGKVGMR 
Sbjct: 1   MPTHTSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRR 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPSDKAAEAGG---DKAPVVDVSQFGYFKVLGKGMLPEK 403
           FH + N  + PTVN++RLW++VP++   +  G   + APV++V Q GY KVLGKG LP+ 
Sbjct: 61  FHLMKNPLWRPTVNLDRLWTLVPNETREKYLGKNTEVAPVINVLQSGYGKVLGKGRLPDT 120

Query: 404 PIVVKAK 424
           P++++ +
Sbjct: 121 PVIIQTR 127

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>RL27A_EUPCR (P48161) 60S ribosomal protein L27a (L29)|
          Length = 148

 Score =  163 bits (412), Expect = 2e-40
 Identities = 76/127 (59%), Positives = 96/127 (75%), Gaps = 2/127 (1%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           MT   +  RK RGHVS GHGRVGKHRKHPGGRG AG  HHHRI   KYHPG+ GK GMR+
Sbjct: 1   MTHSKRNTRKLRGHVSHGHGRVGKHRKHPGGRGMAGPEHHHRINVFKYHPGHIGKHGMRH 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDKAPV--VDVSQFGYFKVLGKGMLPEKP 406
           FH + N++Y P++N+ +LWS+V  ++  +A  DK+ V  +DV + GY+KVLGKG+LPE P
Sbjct: 61  FHLMRNQYYCPSINLSKLWSLVTEEERQKAQTDKSKVILIDVVKHGYYKVLGKGLLPEVP 120

Query: 407 IVVKAKL 427
           +VVKAKL
Sbjct: 121 LVVKAKL 127

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>RL27A_TETTH (Q00454) 60S ribosomal protein L27a (L29)|
          Length = 149

 Score =  160 bits (406), Expect = 9e-40
 Identities = 77/128 (60%), Positives = 94/128 (73%), Gaps = 4/128 (3%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHP--GGRGNAGGMHHHRILFDKYHPGYFGKVGM 226
           M + LKK RK RGHVS GHGRVGKHRK    GGRG AGGMHHHRIL +K+HPGY+GK+GM
Sbjct: 1   MVSHLKKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGM 60

Query: 227 RYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGD--KAPVVDVSQFGYFKVLGKGMLPE 400
           R FH   N  + P VN+++LWS+V      +   D  K PV+DV++ G+FKVLGKG LP 
Sbjct: 61  RTFHLKKNPLHCPVVNIDKLWSLVSDATRQKYAEDKKKVPVIDVTKAGFFKVLGKGRLPN 120

Query: 401 KPIVVKAK 424
           +P+VVKAK
Sbjct: 121 QPVVVKAK 128

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>R27A2_ENTHI (Q9BH80) 60S ribosomal protein L27a-2/4|
          Length = 149

 Score =  156 bits (395), Expect = 2e-38
 Identities = 68/128 (53%), Positives = 94/128 (73%), Gaps = 4/128 (3%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           M TR ++ R++RGHVS G+GR+GKHRK  GGRGNAGG HH +  F  +HP YFGK GMR 
Sbjct: 1   MATRFRQTRRRRGHVSMGYGRIGKHRKQRGGRGNAGGQHHRKTWFTTFHPDYFGKHGMRV 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPSDKAAE----AGGDKAPVVDVSQFGYFKVLGKGMLPE 400
           FH  +N++Y P++NV+ LWS+V  D  A+      G++ PV+D  + GYFKVLGKG LP+
Sbjct: 61  FHLKANKYYCPSINVDSLWSLVGKDVQAQYKNAKVGEEVPVIDCVKHGYFKVLGKGFLPK 120

Query: 401 KPIVVKAK 424
           +P++V+A+
Sbjct: 121 QPVIVRAR 128

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>R27A1_ENTHI (Q9BI06) 60S ribosomal protein L27a-1|
          Length = 149

 Score =  156 bits (394), Expect = 2e-38
 Identities = 68/128 (53%), Positives = 94/128 (73%), Gaps = 4/128 (3%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           M TR ++ R++RGHVS G+GR+GKHRK  GGRGNAGG HH +  F  +HP YFGK GMR 
Sbjct: 1   MATRFRQTRRRRGHVSMGYGRIGKHRKQRGGRGNAGGQHHRKTWFTTFHPDYFGKHGMRV 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPSDKAAE----AGGDKAPVVDVSQFGYFKVLGKGMLPE 400
           FH  +N++Y P++NV+ LWS+V  D  A+      G++ PV+D  + GYFKVLGKG LP+
Sbjct: 61  FHLKANKYYCPSINVDSLWSLVGKDIQAQYKNAKVGEEVPVIDCVKHGYFKVLGKGFLPK 120

Query: 401 KPIVVKAK 424
           +P++V+A+
Sbjct: 121 QPVIVRAR 128

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>RL27A_TENMO (Q27021) 60S ribosomal protein L27a|
          Length = 148

 Score =  155 bits (393), Expect = 3e-38
 Identities = 70/115 (60%), Positives = 86/115 (74%), Gaps = 3/115 (2%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           M+T  KK RK RGHVS GHGR+GKHRKHPGGRGNAGGMHHHRI FDKYHPGYFGK+GMR 
Sbjct: 1   MSTHKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKLGMRN 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPS---DKAAEAGGDKAPVVDVSQFGYFKVLGKG 388
           +H   N  + P +N+++LW++V      K       KAPV+D+ + GY+K+LGKG
Sbjct: 61  YHLRRNSKWAPAINLDKLWTLVSEQTRSKYQNHPEGKAPVIDIVKAGYYKLLGKG 115

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>R27A3_ENTHI (Q9BI14) 60S ribosomal protein L27a-3|
          Length = 149

 Score =  155 bits (391), Expect = 5e-38
 Identities = 67/128 (52%), Positives = 93/128 (72%), Gaps = 4/128 (3%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           M TR ++ R++RGHVS G+GR+GKHRK  GGRGNAGG HH +  F  +HP YFGK GMR 
Sbjct: 1   MATRFRQTRRRRGHVSMGYGRIGKHRKQRGGRGNAGGQHHRKTWFTTFHPDYFGKHGMRV 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPSDKAAE----AGGDKAPVVDVSQFGYFKVLGKGMLPE 400
           FH  +N++Y P++NV+ LWS+V  D   +      G++ PV+D  + GYFKVLGKG LP+
Sbjct: 61  FHLKANKYYCPSINVDSLWSLVGKDVQEQYKNAKTGEEVPVIDCVKHGYFKVLGKGFLPK 120

Query: 401 KPIVVKAK 424
           +P++V+A+
Sbjct: 121 QPVIVRAR 128

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>RL27A_TRYBB (O15883) 60S ribosomal protein L27a (L29)|
          Length = 145

 Score =  142 bits (359), Expect = 3e-34
 Identities = 68/125 (54%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           M TR KK R +RG    G+GRVGKHRKHP GRGNAGG HHHRI F KYHPGYFGK GM +
Sbjct: 1   MPTRFKKTRHQRGSTFCGYGRVGKHRKHPSGRGNAGGEHHHRINFRKYHPGYFGKCGMNH 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPSDKAAEA-GGDKAPVVDVSQFGYFKVLGKGMLPEKPI 409
           +HK  N  + PT+N++ L  ++  D+A +A  G+  PV+D+   GY K+LG G L + P 
Sbjct: 61  YHKKKNTTWKPTINLDNLTKLMAKDEAMKAKKGEVLPVIDLLANGYSKLLGNGHL-QAPC 119

Query: 410 VVKAK 424
           +VKA+
Sbjct: 120 IVKAR 124

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>RL27A_ENCCU (O62581) 60S ribosomal protein L27a|
          Length = 147

 Score =  135 bits (339), Expect = 5e-32
 Identities = 64/126 (50%), Positives = 84/126 (66%), Gaps = 2/126 (1%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           MT R+KK RK RGHVS G+GRVGKHRKH GGRG AGG  H +  F ++HP Y GK GMR 
Sbjct: 1   MTDRVKKTRKLRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRV 60

Query: 233 FHKLSNRFYTPTVNVERLWSMVPSDKAAE--AGGDKAPVVDVSQFGYFKVLGKGMLPEKP 406
           +H+  N  Y   ++  RLW M+P ++  +     +K PV+DV +FGY  V+G  +  E+P
Sbjct: 61  YHRKENSDYARPISSARLWGMIPKEQRYDFLDNPEKVPVIDVREFGYHVVVGGKLSLERP 120

Query: 407 IVVKAK 424
           IVVKA+
Sbjct: 121 IVVKAR 126

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>RL27A_PIG (Q29333) 60S ribosomal protein L27a (Fragment)|
          Length = 53

 Score =  101 bits (251), Expect = 9e-22
 Identities = 43/52 (82%), Positives = 46/52 (88%)
 Frame = +2

Query: 59  TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFG 214
           +RL+  RK RGHVS GHGR+GKHRKHPGGRGNAGGMHHHRI FDKYH GYFG
Sbjct: 2   SRLRXTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHXGYFG 53

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>RL15_METVA (P14032) 50S ribosomal protein L15P|
          Length = 143

 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 48/125 (38%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRK--HPGGRGNAGGMHHHRILFDKYHPGYFGKVGM 226
           M  + KK  K+RG  + G+G   KHR   H GGRGNAG   H  +   K++P YFGK G 
Sbjct: 1   MIRKSKKITKQRGSRTCGYGEAKKHRGAGHRGGRGNAGHQKHKWLSVCKFNPEYFGKYGF 60

Query: 227 RYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGMLPEKP 406
                L  +    T+NV  L   V   K A    D   VV+ ++ G+ K+LGKG +    
Sbjct: 61  NRNPCLIKKL--ETINVGELEEYVLKYKDAFKLKDGKVVVNATEIGFEKILGKGRI-STA 117

Query: 407 IVVKA 421
           +VVKA
Sbjct: 118 MVVKA 122

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>RL15_METMP (Q6LXD1) 50S ribosomal protein L15P|
          Length = 143

 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 47/125 (37%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRK--HPGGRGNAGGMHHHRILFDKYHPGYFGKVGM 226
           M  + KK  KKRG  + G+G   KHR   H GGRGNAG   H  +   K++P YFGK G 
Sbjct: 1   MIRKSKKITKKRGSRTCGYGEAKKHRGAGHRGGRGNAGHQKHKWLSVCKFNPDYFGKYGF 60

Query: 227 RYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGMLPEKP 406
                L  +    T+N+  L   +   K A    +   VV+ ++ G+ KVLGKG +    
Sbjct: 61  NRNPCLIKQL--ETINIGELEEYILKYKDAFQVEEGKVVVNATEIGFEKVLGKGRI-STA 117

Query: 407 IVVKA 421
           +VVKA
Sbjct: 118 MVVKA 122

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>RL15_METTH (O26133) 50S ribosomal protein L15P|
          Length = 146

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRK--HPGGRGNAGGMHHHRILFDKYHPGYFGKVGM 226
           M  + +K  + RG  + G G   K R   H GGRG AGG  HH     KY P +FGK G 
Sbjct: 1   MIRKRRKITRMRGSRTVGGGCSKKRRGAGHRGGRGQAGGHKHHWTWIVKYDPKHFGKYGF 60

Query: 227 RYFHKLSNRFYTPTVNVERLWSMVPS--DKAAEAGGDKAPVVDVSQFGYFKVLGKGMLPE 400
           +   KL  R    TVN+  L  M+P   ++   +  D   V+DV   G+ KVLG G +  
Sbjct: 61  KRPQKLIKRL--ETVNLAYLDEMIPELLERGVASEEDGMVVLDVRDLGFEKVLGSGRI-T 117

Query: 401 KPIVVKA 421
           +P+ +KA
Sbjct: 118 RPVHLKA 124

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>RL15_METJA (P54047) 50S ribosomal protein L15P|
          Length = 143

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 50/125 (40%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRK--HPGGRGNAGGMHHHRILFDKYHPGYFGKVGM 226
           M  + KK +K RG  + G G   K R   + GGRG AGG  H      KY P YFGK G 
Sbjct: 1   MIRKKKKVKKIRGSRTCGGGSHKKRRGAGNKGGRGMAGGHKHKWTWIIKYCPDYFGKYGF 60

Query: 227 RYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGMLPEKP 406
           +    L  R    T+NV  L  +V  +       D   VVDV + GY KVLGKG +   P
Sbjct: 61  KRHPSLVKRL--ETINVGELEEIVLKNPDKFEKEDDKFVVDVIELGYEKVLGKGKV-TIP 117

Query: 407 IVVKA 421
           ++VKA
Sbjct: 118 MIVKA 122

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>RL15_SULAC (O05643) 50S ribosomal protein L15P|
          Length = 144

 Score = 56.2 bits (134), Expect = 3e-08
 Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
 Frame = +2

Query: 68  KKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFD-KYHPGYFGKVGMRY-FHK 241
           KK+RK RG+ + G G  G+HR      G   GMH  +  +  K+  G++GK G R    K
Sbjct: 7   KKSRKYRGYRTHGWGTKGQHRDRGAQGGRQIGMHKEKWSWTVKFGEGWYGKHGFRNPTSK 66

Query: 242 LSNRFYTPTVNVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGMLPEKPIVVK 418
           L N      + + +L   + +DK      +   VVD++++GY K+LG G L   P+V+K
Sbjct: 67  LVN-----AIGLRKLQEYIDNDKIKIEEENGKKVVDLAKYGYDKLLGGGNL-RLPLVIK 119

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>RL15_SULSO (Q9UX85) 50S ribosomal protein L15P|
          Length = 144

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
 Frame = +2

Query: 62  RLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHR-ILFDKYHPGYFGKVGMRYFH 238
           R KK+RK RG  + G G  G+HR      G   GMH  +     KY  G++GK G R   
Sbjct: 5   REKKSRKMRGSRTMGWGIRGQHRDRGSQGGRQIGMHKEKWSWLVKYGKGWYGKHGFRN-- 62

Query: 239 KLSNRFYTPTVNVERLWSMVPSD--KAAEAGGDKAPVVDVSQFGYFKVLGKGMLPEKPIV 412
                  T  +++ +L  ++ S   K  E  G K  +VD+++ GY K+LG G +   P+ 
Sbjct: 63  --PTTKLTSAISLRKLNELLESGYIKIKEMDGKK--IVDLNELGYNKLLGGGSI-SIPVT 117

Query: 413 VK 418
           +K
Sbjct: 118 IK 119

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>RL15_AERPE (Q9YF98) 50S ribosomal protein L15P|
          Length = 158

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
 Frame = +2

Query: 62  RLKKNRKKRGHV-SAGHGRVGKHRKH--PGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 232
           R KK+RK RG   +   GR+G+HRK    GG G AG   H      KY P ++GK G   
Sbjct: 5   RRKKSRKLRGRTRTMSWGRIGQHRKSGSKGGYGAAGLGKHEWTWTIKYAPTWYGKKGFNP 64

Query: 233 FHKLSNRFYTPTVNV---ERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKG 388
             ++       T+NV   + + +++ +   AE    K  VV++ + G  K+LG+G
Sbjct: 65  -PRIRAGLEVTTINVGQLDEIAALLEAQGKAEKEDGKI-VVNLEKLGIHKLLGEG 117

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>RL15_THEVO (Q97BV4) 50S ribosomal protein L15P|
          Length = 145

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
 Frame = +2

Query: 62  RLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHK 241
           R +  + + GH   G  + G+ +   GGRGNAG   H  I   KY P +FG  G    H 
Sbjct: 3   RERTKKLRGGHYGRGM-KAGRGKGKKGGRGNAGMGKHKWIWMVKYDPLHFGGKGFTSHHL 61

Query: 242 LSNRFYTPTVNVERLWSMVPSDK-AAEAGGDKAPVVDVSQFGYFKVLGKGMLPEKPIVV 415
            +         +E ++  + +D    E  G+   VVD+   GY K+LG G    K  ++
Sbjct: 62  STPDVPINLGELENIFENLKADGFVREENGE--TVVDLKAAGYDKLLGSGNFSVKSRII 118

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>RL15_PYRAE (Q8ZT50) 50S ribosomal protein L15P|
          Length = 156

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
 Frame = +2

Query: 53  MTTRLKKNRK-KRGHVSAGHGRVGKHRKH--PGGRGNAGGMHHHRILFDKYHPG-----Y 208
           M  R K+  K +RG  + G GRVG+HRK    GG+G  G   H   L  KY        +
Sbjct: 1   MVRRFKRGTKYRRGSRTHGWGRVGQHRKSGGSGGKGMVGFHKHKWSLVMKYGESGTGWPF 60

Query: 209 FGKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKA----AEAGGDKAPVVDVSQFGYFKV 376
           +GK G +    +S  +    +NV  L  +V   KA     E GG    V+++ + G+ K+
Sbjct: 61  YGKHGFKQPPPISIEW--RPINVGTLAELVKELKAEGKVREEGGKY--VINLLELGFNKL 116

Query: 377 LGKGMLPEKPIVV 415
           LG G + + P++V
Sbjct: 117 LGGGTI-DLPVIV 128

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>RL28_CANAL (P47831) 60S ribosomal protein L28 (L27A) (L29) (Fragment)|
          Length = 62

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = +2

Query: 314 AEAGGDKAPVVDVSQFGYFKVLGKGMLPEKPIVVKAK 424
           +++    APV+D    GY KVLGKG LPE P++VKA+
Sbjct: 8   SKSSASAAPVIDTLAHGYGKVLGKGRLPEVPVIVKAR 44

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>RL15_THEAC (Q9HIS9) 50S ribosomal protein L15P|
          Length = 144

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
 Frame = +2

Query: 62  RLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHK 241
           R +  + + GH   G  + G+ +   GG GNAG   H  I   KY P +FG  G    H 
Sbjct: 3   RERTKKLRGGHYGRGF-KAGRGKGKKGGSGNAGMGKHKWIWMVKYDPLHFGGKGFTSHHI 61

Query: 242 LSNRFYTPTVNVERLWSMVPSDK-AAEAGGDKAPVVDVSQFGYFKVLGKGMLPEKPIVV 415
                     +VE ++  +  D    E  G+   +VD+   GY K+LG G    K  ++
Sbjct: 62  SQVEVPINLGDVEYMYESLKRDGFVREENGE--IIVDLRAAGYDKLLGNGNFTVKSTII 118

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>YGK2_YEAST (P53143) Hypothetical 16.2 kDa protein in RPL28-SEH1 intergenic|
           region
          Length = 142

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 19/47 (40%), Positives = 30/47 (63%)
 Frame = -3

Query: 241 LVEVPHTDFAEVAGMVLVEEDAVVVHASGVTAASGMLAVLAHTPVPG 101
           LVEV HT+  E+  MV +  ++VV+  +G T+ +G+L+VL  T   G
Sbjct: 90  LVEVSHTNLTEITWMVFIHVNSVVMLTTGHTSTTGVLSVLTDTTFTG 136

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>RL15_HALMA (P12737) 50S ribosomal protein L15P (Hmal15) (Hl9)|
          Length = 164

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
 Frame = +2

Query: 56  TTRLKKNRKKRGHVSAGHGRVGKHRK---HPGGRGNAGGMHHHRILFDKYHPGYFGKVGM 226
           T++ K+ R  R H    H    K+R+   H GGRG+AG   H    F  + P   GK G 
Sbjct: 1   TSKKKRQRGSRTHGGGSH----KNRRGAGHRGGRGDAGRDKHE---FHNHEP--LGKSGF 51

Query: 227 RYFHKLSNRFYTPTV-NVERLWSMVPSDKAAEA--GGDKAPVVDV----SQFGYFKVLGK 385
           +   K+     T  V  ++   +++ +D  AE   GG +  V DV        Y KVLG 
Sbjct: 52  KRPQKVQEEAATIDVREIDENVTLLAADDVAEVEDGGFRVDVRDVVEEADDADYVKVLGA 111

Query: 386 GML 394
           G +
Sbjct: 112 GQV 114

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>RL15_METAC (Q8TRS5) 50S ribosomal protein L15P|
          Length = 140

 Score = 35.4 bits (80), Expect = 0.058
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
 Frame = +2

Query: 77  RKKRGHVSAGHGRVGKHRK---HPGGRGNAGGMHHH--RILFDKYHPGYFGKVGMRYFHK 241
           +K RG  + G G   K+R+   + GGRG AGG  HH  R +   Y    +GK G +   +
Sbjct: 4   KKFRGSRTCGGG-THKNRRGAGNRGGRGKAGGCKHHFVRAMMRGYS---YGKHGFKRPDE 59

Query: 242 LSNRFYTPTV-NVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGMLPEKPIV 412
           +S       V  ++ L S +  +  AE   D A  +++   G  KVLG G + +  +V
Sbjct: 60  VSRDVSIVNVGELDELASYLVEEGLAEV-KDGAYHINLENLGIEKVLGSGRVTKNLVV 116

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>RL15_NATPD (Q3IMW6) 50S ribosomal protein L15P|
          Length = 163

 Score = 35.4 bits (80), Expect = 0.058
 Identities = 41/119 (34%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
 Frame = +2

Query: 65  LKKNRKKRGHVSAGHGRVGKHRK--HPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 238
           + K R++RG  + G G     R   H GGRGNAG   H    F  + P   GK G +   
Sbjct: 1   MSKKRRQRGSRTHGGGSHKNRRGAGHRGGRGNAGRDKHE---FHNHEP--LGKSGFKRPQ 55

Query: 239 KLSNRFYTPTVNVERL---WSMVPSDKAAEAGGDKAPV--VDVSQFGY----FKVLGKG 388
           K   R    TVN+  L    +++  D  AE   D   V   DV + GY     KVLG G
Sbjct: 56  K--TRRDVETVNLRELDEDIAVLVEDGIAEESDDGYVVDARDVVEDGYEADVVKVLGAG 112

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>RL15_METMA (Q8PV28) 50S ribosomal protein L15P|
          Length = 140

 Score = 34.7 bits (78), Expect = 0.098
 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
 Frame = +2

Query: 77  RKKRGHVSAGHGRVGKHRK---HPGGRGNAGGMHHH--RILFDKYHPGYFGKVGMRYFHK 241
           +K RG  + G G   K+R+   + GGRG AGG  HH  R +   Y    +GK G +   +
Sbjct: 4   KKFRGSRTCGGG-THKNRRGAGNRGGRGKAGGCKHHFVRAMMRGYS---YGKHGFKRPVE 59

Query: 242 LSNRFYTPTVNVERLWSMVP--SDKAAEAGGDKAPVVDVSQFGYFKVLGKGMLPEKPIV 412
           +S       VNV  L  + P   ++      D A  +++   G  KVLG G + +  +V
Sbjct: 60  VSKDI--SIVNVGELDELAPYLVEEGLAEVKDGAYHINLENLGIEKVLGSGRVTKNLVV 116

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>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (MHC class I region proline-rich protein CAT53) (Protein
            FB19)
          Length = 940

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 22/63 (34%), Positives = 28/63 (44%)
 Frame = +2

Query: 86   RGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLSNRFYTP 265
            RGH   GHG  G HR H GG  + G M +  +        +  K   RY +  +  FY P
Sbjct: 881  RGHDGPGHGG-GGHRGHDGGHSHGGDMSNRPVC-----RHFMMKGNCRYENNCA--FYHP 932

Query: 266  TVN 274
             VN
Sbjct: 933  GVN 935

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>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (MHC class I region proline-rich protein CAT53)
          Length = 940

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 22/63 (34%), Positives = 28/63 (44%)
 Frame = +2

Query: 86   RGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLSNRFYTP 265
            RGH   GHG  G HR H GG  + G M +  +        +  K   RY +  +  FY P
Sbjct: 881  RGHDGPGHGG-GGHRGHDGGHSHGGDMSNRPVC-----RHFMMKGNCRYENNCA--FYHP 932

Query: 266  TVN 274
             VN
Sbjct: 933  GVN 935

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>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (Phosphatase 1 nuclear targeting subunit) (MHC class I
            region proline-rich protein CAT53) (FB19 protein)
            (PP1-binding protein of 114 kDa) (p99)
          Length = 940

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 22/63 (34%), Positives = 28/63 (44%)
 Frame = +2

Query: 86   RGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLSNRFYTP 265
            RGH   GHG  G HR H GG  + G M +  +        +  K   RY +  +  FY P
Sbjct: 881  RGHDGPGHGG-GGHRGHDGGHSHGGDMSNRPVC-----RHFMMKGNCRYENNCA--FYHP 932

Query: 266  TVN 274
             VN
Sbjct: 933  GVN 935

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>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (MHC class I region proline-rich protein CAT53) (Protein
            FB19)
          Length = 925

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/63 (34%), Positives = 27/63 (42%)
 Frame = +2

Query: 86   RGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLSNRFYTP 265
            RGH   GHG  G HR H GG  + G M    +        +  K   RY +  +  FY P
Sbjct: 866  RGHDGPGHGG-GGHRGHDGGHNHGGDMSKRPVC-----RHFMMKGNCRYENNCA--FYHP 917

Query: 266  TVN 274
             VN
Sbjct: 918  GVN 920



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +2

Query: 86  RGHVSAGHGRVGKHRKHPGGRGNAGGMHHHR 178
           R H   G G  G HR H G  G  GG   HR
Sbjct: 785 RPHEGPGGGMGGGHRPHEGPGGGMGGGSGHR 815



 Score = 28.1 bits (61), Expect = 9.2
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +2

Query: 86  RGHVSAGHGRVGKHRKHPGGRGNAGGMH 169
           R H   G G  G HR H G  G  GG H
Sbjct: 771 RPHEGPGGGMGGGHRPHEGPGGGMGGGH 798

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>AXN1_HUMAN (O15169) Axin-1 (Axis inhibition protein 1) (hAxin)|
          Length = 862

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 89  GHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYH 199
           G  ++GHG   KH    G + +A G+HHHR +    H
Sbjct: 507 GGAASGHG---KHVPKSGAKLDAAGLHHHRHVHHHVH 540

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>CUO5_BLACR (P82118) Cuticle protein 5 (BcNCP14.6)|
          Length = 145

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 16/94 (17%)
 Frame = +2

Query: 104 GHGRVGKH---RKHPGGRGNAGGMHHHRILFD-------------KYHPGYFGKVGMRYF 235
           G   VG H   + HPG  G+ G  H H   +D             +Y PG +G  G  + 
Sbjct: 44  GGAYVGAHDDGQYHPGLYGDEGQYHSH---YDGGYVGYAGGYDDGQYRPGLYGDEGQYHG 100

Query: 236 HKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDKA 337
              +  +  P   V  + + VP+D  A A    A
Sbjct: 101 EGYAGHYAGPIAGVPVIVNGVPADTPAVAAAKAA 134

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>DBP9_NEUCR (Q7S6F3) ATP-dependent RNA helicase dbp-9 (EC 3.6.1.-)|
          Length = 676

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +2

Query: 68  KKNRKKRGHVSAGHGRVGKHRKHPGGRGN 154
           KK R K+G    G G  GK++K PGGR N
Sbjct: 640 KKTRGKKG-AKGGKGGHGKYKKGPGGRKN 667

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>ANTP_DROME (P02833) Homeotic protein antennapedia|
          Length = 378

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 187 RQVPSRLLRQSRYEVLPQAQQQVLHPDRQRREALVH 294
           +Q P +L +Q     LPQ  QQV HP +Q+++ +V+
Sbjct: 129 QQAPQQLQQQ-----LPQVTQQVTHPQQQQQQPVVY 159

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>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 888

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 18/48 (37%), Positives = 19/48 (39%)
 Frame = +2

Query: 86  RGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR 229
           R H   G      HR H G  GN GG   HR       PG+ G  G R
Sbjct: 766 RSHDGPGGNMGSGHRSHDGPGGNMGGSGGHR---SHEGPGHGGPHGHR 810

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>YGFU_ECOLI (Q46821) Putative purine permease ygfU|
          Length = 482

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = -3

Query: 280 LDVDGRGVEPVAELVEVPHTDFAEVAGMVLVEEDAVVVHASGVTAASGMLAVL 122
           L VDG G          PHT F++  G+V V      VH+  V  +SG++ +L
Sbjct: 295 LRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTR----VHSRWVCISSGIILIL 343

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>DNJ10_CAEEL (Q8TA83) DnaJ homolog dnj-10 (DnaJ domain protein 10)|
          Length = 456

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = +2

Query: 140 GGRGNAGGMHHH 175
           GGRG AGG HHH
Sbjct: 115 GGRGGAGGFHHH 126

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>MAF_AVIS4 (P23091) Transforming protein Maf|
          Length = 369

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +2

Query: 89  GHVSAGHGRVGKHRKHPGGRGNAGGMH 169
           G    G G  G H  H GG G  GG+H
Sbjct: 216 GGGGGGGGAGGLHHPHHGGGGGGGGLH 242

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>RBBP6_MOUSE (P97868) Retinoblastoma-binding protein 6 (p53-associated cellular|
            protein of testis) (Proliferation potential-related
            protein) (Protein P2P-R)
          Length = 1790

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +2

Query: 38   AAAAAMTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHR 178
            A++A      KK +KK       H +  KH+KH G  G+      H+
Sbjct: 1718 ASSAGSQDSKKKKKKKEKKKHKKHKKHKKHKKHAGADGDVEKSQKHK 1764

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>ENGC_XANCP (Q8P5H9) Probable GTPase engC (EC 3.6.1.-)|
          Length = 363

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -3

Query: 274 VDGRGVEPVAELVEVPHTDFAEVAGMVLVEEDAVVVHASGVTA 146
           V G G EPV  L +   T++AE A  VL E +A  +    V A
Sbjct: 145 VGGGGAEPVVVLTKADQTEYAEDALAVLEELEAQNIALRAVNA 187

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>AXN1_BRARE (P57094) Axin-1 (Axis inhibition protein 1)|
          Length = 835

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 110 GRVGKHRKHPGGRGNAGGMHHHR 178
           G  GKH+   G +G A  +HHH+
Sbjct: 521 GGQGKHQARQGPKGEAAHLHHHK 543

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>COX2_CULQU (P50693) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide II)
          Length = 228

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = +2

Query: 218 VGMRYFHKLSNRFYTPTVNVERLWSMVPS 304
           +GM +F+K +NR+      +E +W+++P+
Sbjct: 42  MGMLFFNKFTNRYLLHGQTIEIIWTILPA 70

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>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2|
          Length = 953

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 53  MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGG 163
           M +R   +R  RG      GR G     PGG G+AGG
Sbjct: 271 MPSRSNGSRNGRGGAGGQGGRPGFGGGRPGGGGSAGG 307

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>XRN1_HUMAN (Q8IZH2) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (Strand-exchange|
            protein 1 homolog)
          Length = 1706

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
 Frame = -3

Query: 268  GRGVE-PVAELVEVPHTDFAEVAGMVLVE----EDAVVVHASGVTAASGMLAVLAHTP 110
            GRG   P + LV + H   +E     L      + AV  H+S  + +SG L  L H+P
Sbjct: 1159 GRGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVHQHSSSSSVSSGHLGALNHSP 1216

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>SALA_DROME (P21750) Protein spalt-accessory precursor (Protein spalt-adjacent)|
          Length = 142

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 19/50 (38%), Positives = 22/50 (44%)
 Frame = +2

Query: 89  GHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 238
           G V  G G V     HPG  G AG    ++     Y PGY   VG  +FH
Sbjct: 60  GQVGIGQGGV-----HPGQGGFAGQGSPNQ-----YQPGYGSPVGSGHFH 99

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>UCRQ_NEUCR (P48503) Ubiquinol-cytochrome c reductase complex|
           ubiquinone-binding protein QP-C precursor (EC 1.10.2.2)
           (Ubiquinol-cytochrome c reductase complex 11 kDa
           protein) (Complex III subunit VII)
          Length = 107

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 104 GHGRVGKHRKHPGGRGNAGGMHHHRIL 184
           G   +GKH  + GG GN GGM    I+
Sbjct: 12  GGAPIGKHNHYLGGWGNFGGMKQRGII 38

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>RL3_SPIKU (P60457) 50S ribosomal protein L3|
          Length = 258

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = +2

Query: 56  TTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFG 214
           T  +K++   RG +  GHG  G HR    G G+ G +  +RIL  K  PG+ G
Sbjct: 117 TGSIKRHNYSRGPM--GHGS-GYHR----GVGSMGAIAPNRILKSKKMPGHIG 162

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>UREE_BORPE (Q7VUD4) Urease accessory protein ureE|
          Length = 205

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 89  GHVSAGHGRVGKHRKH 136
           GHV +GHG  GKH +H
Sbjct: 186 GHVHSGHGHGGKHGEH 201

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>UREE_BORPA (Q7W418) Urease accessory protein ureE|
          Length = 205

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 89  GHVSAGHGRVGKHRKH 136
           GHV +GHG  GKH +H
Sbjct: 186 GHVHSGHGHGGKHGEH 201

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>UREE_BORBR (Q7WFF2) Urease accessory protein ureE|
          Length = 205

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 89  GHVSAGHGRVGKHRKH 136
           GHV +GHG  GKH +H
Sbjct: 186 GHVHSGHGHGGKHGEH 201

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>SALA_DROSI (P21749) Protein spalt-accessory precursor|
          Length = 139

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 19/50 (38%), Positives = 22/50 (44%)
 Frame = +2

Query: 89  GHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 238
           G V  G G V     HPG  G AG    ++     Y PGY   VG  +FH
Sbjct: 57  GQVGIGQGGV-----HPGQGGFAGQGSPNQ-----YQPGYGNPVGSGHFH 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,588,128
Number of Sequences: 219361
Number of extensions: 698933
Number of successful extensions: 2971
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 2741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2903
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result