ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal26d09 |
|---|---|
| Clone Library Name | barley_pub |
>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 224 bits (570), Expect(2) = 3e-61 Identities = 109/119 (91%), Positives = 114/119 (95%) Frame = +2 Query: 44 TVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKE 223 T+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KE Sbjct: 214 TIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKE 273 Query: 224 NVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 400 NVKN SSSTG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLE Sbjct: 274 NVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332 Score = 30.8 bits (68), Expect(2) = 3e-61 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQLPGGERVPFL Sbjct: 200 TVQLPGGERVPFL 212
>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 223 bits (567), Expect(2) = 8e-61 Identities = 108/119 (90%), Positives = 114/119 (95%) Frame = +2 Query: 44 TVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKE 223 TVKQLVATGKPESFSG +LVPSYRGSSFLDPKGRGGS GYDNAVALPAGGRGDEEEL KE Sbjct: 211 TVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKE 270 Query: 224 NVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 400 N+K+ SSSTG ITLSVTKSKPETGEVIGVFES+QPSDTDLG+KAPKDVKIQG+WYAQLE Sbjct: 271 NIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329 Score = 30.8 bits (68), Expect(2) = 8e-61 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQLPGGERVPFL Sbjct: 197 TVQLPGGERVPFL 209
>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 220 bits (561), Expect(2) = 4e-60 Identities = 107/119 (89%), Positives = 113/119 (94%) Frame = +2 Query: 44 TVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKE 223 T+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KE Sbjct: 211 TIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKE 270 Query: 224 NVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 400 NVKN +S TG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLE Sbjct: 271 NVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329 Score = 30.8 bits (68), Expect(2) = 4e-60 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQLPGGERVPFL Sbjct: 197 TVQLPGGERVPFL 209
>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 216 bits (551), Expect(2) = 5e-59 Identities = 106/120 (88%), Positives = 114/120 (95%) Frame = +2 Query: 44 TVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKE 223 T+KQLVA+GKP+SFSG FLVPSYRGSSFLDPKGRG STGYDNAVALPAGGRGDEEEL KE Sbjct: 210 TIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKE 269 Query: 224 NVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 403 N K+A+SS G ITLSVT++KPETGEVIGVFES+QPSDTDLGAKAPKDVKIQGVWYAQLES Sbjct: 270 NNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLES 329 Score = 30.8 bits (68), Expect(2) = 5e-59 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQLPGGERVPFL Sbjct: 196 TVQLPGGERVPFL 208
>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 331 Score = 215 bits (548), Expect(2) = 1e-58 Identities = 104/119 (87%), Positives = 111/119 (93%) Frame = +2 Query: 44 TVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKE 223 TVKQL A+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL+KE Sbjct: 213 TVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKE 272 Query: 224 NVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 400 NVKN ++S G ITL +TKSKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGVWY Q+E Sbjct: 273 NVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331 Score = 30.8 bits (68), Expect(2) = 1e-58 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQLPGGERVPFL Sbjct: 199 TVQLPGGERVPFL 211
>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 325 Score = 218 bits (556), Expect(2) = 1e-58 Identities = 114/121 (94%), Positives = 115/121 (95%) Frame = +2 Query: 44 TVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKE 223 TVKQLVATGKPESF PFLVPSYRGSSFLDPKGRGGSTGYDNA ALP GGRGDEEELAKE Sbjct: 208 TVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKE 266 Query: 224 NVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 403 NVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL +APKDVKIQGVWYAQLES Sbjct: 267 NVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL--EAPKDVKIQGVWYAQLES 324 Query: 404 N 406 N Sbjct: 325 N 325 Score = 27.7 bits (60), Expect(2) = 1e-58 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQLPGGERV FL Sbjct: 194 TVQLPGGERVAFL 206
>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 214 bits (546), Expect(2) = 2e-58 Identities = 105/119 (88%), Positives = 111/119 (93%) Frame = +2 Query: 44 TVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKE 223 T+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KE Sbjct: 212 TIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKE 271 Query: 224 NVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 400 N KN +SS G ITLSVT SKPETGEVIGVF+S+QPSDTDLGAK PKDVKI+GVWYAQLE Sbjct: 272 NNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLE 330 Score = 30.8 bits (68), Expect(2) = 2e-58 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQLPGGERVPFL Sbjct: 198 TVQLPGGERVPFL 210
>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 333 Score = 214 bits (545), Expect(2) = 3e-58 Identities = 104/120 (86%), Positives = 111/120 (92%) Frame = +2 Query: 44 TVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKE 223 T+KQLVA+GKPESFS FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KE Sbjct: 214 TIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKE 273 Query: 224 NVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 403 NVKN +S TG IT +VTKS P+TGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLES Sbjct: 274 NVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLES 333 Score = 30.8 bits (68), Expect(2) = 3e-58 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQLPGGERVPFL Sbjct: 200 TVQLPGGERVPFL 212
>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 213 bits (543), Expect(2) = 4e-58 Identities = 104/119 (87%), Positives = 110/119 (92%) Frame = +2 Query: 44 TVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKE 223 TVKQL A+GKP+SF+G FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KE Sbjct: 214 TVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKE 273 Query: 224 NVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 400 NVKN ++S G ITL VTKSKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGVWY QLE Sbjct: 274 NVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332 Score = 30.8 bits (68), Expect(2) = 4e-58 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQLPGGERVPFL Sbjct: 200 TVQLPGGERVPFL 212
>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 291 Score = 159 bits (401), Expect(2) = 8e-41 Identities = 79/119 (66%), Positives = 89/119 (74%) Frame = +2 Query: 44 TVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKE 223 T+KQ G + G FLVPSYRGSSFLDPKGRGGSTGYDNAVALPA R D EEL KE Sbjct: 175 TIKQFDGKGTLDGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKE 232 Query: 224 NVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 400 NVK + G+ SV K P TGE+ GVFES+QPSDTDLGAK PKD+K+ G+WYAQL+ Sbjct: 233 NVKITKALKGSAVFSVAKVDPVTGEIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291 Score = 27.7 bits (60), Expect(2) = 8e-41 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQLPGGERV FL Sbjct: 161 TVQLPGGERVAFL 173
>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 293 Score = 155 bits (393), Expect(2) = 7e-40 Identities = 77/118 (65%), Positives = 88/118 (74%) Frame = +2 Query: 44 TVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKE 223 T+KQ G ++ G F+VPSYRGSSFLDPKGRGGSTGYDNAVALPA R D EEL KE Sbjct: 176 TIKQFDGKGTLDNIKGDFVVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKE 233 Query: 224 NVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 397 NVK+ + G+ SV K TGE+ GVFES+QPSDTDLGAK PKD+KI G+WY QL Sbjct: 234 NVKSTKALKGSAVFSVAKVNTATGEIAGVFESIQPSDTDLGAKPPKDIKITGLWYGQL 291 Score = 27.7 bits (60), Expect(2) = 7e-40 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQLPGGERV FL Sbjct: 162 TVQLPGGERVAFL 174
>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 338 Score = 155 bits (391), Expect(2) = 1e-39 Identities = 75/118 (63%), Positives = 89/118 (75%) Frame = +2 Query: 44 TVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKE 223 T+K L+A G F G F VPSYRG++FLDPKGRGG++GYD AVALPA G D+EE AKE Sbjct: 219 TIKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAVALPASG--DDEEYAKE 276 Query: 224 NVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 397 N K+ ++S G I V K ETGE+ GVFES+QPSDTDLGAK PKD+K GVWYAQ+ Sbjct: 277 NSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334 Score = 27.7 bits (60), Expect(2) = 1e-39 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQL GGERVPFL Sbjct: 205 TVQLAGGERVPFL 217
>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 273 Score = 131 bits (329), Expect(2) = 2e-33 Identities = 68/127 (53%), Positives = 87/127 (68%), Gaps = 8/127 (6%) Frame = +2 Query: 44 TVKQLVATGKP--------ESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 199 T+K LVA +P F G F VPSYRG++FLDPKGRG +GYDNAVALPA + Sbjct: 149 TIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVALPA--QA 206 Query: 200 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQG 379 D+E+L + NVK A G I+L + K +GE+ G FES QPSDTDLGA PK+VKI+G Sbjct: 207 DDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEIAGTFESEQPSDTDLGADEPKEVKIRG 266 Query: 380 VWYAQLE 400 ++YA++E Sbjct: 267 IFYARVE 273 Score = 30.8 bits (68), Expect(2) = 2e-33 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQLPGGERVPFL Sbjct: 135 TVQLPGGERVPFL 147
>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 275 Score = 125 bits (313), Expect(2) = 1e-30 Identities = 69/126 (54%), Positives = 86/126 (68%), Gaps = 8/126 (6%) Frame = +2 Query: 44 TVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 199 T+K LV +P F G F VPSYRG++FLDPKGRG +TGYDNAVALPA Sbjct: 150 TIKNLVGKTEPGFSSINSSIDFEGDFRVPSYRGATFLDPKGRGLATGYDNAVALPA--TA 207 Query: 200 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQG 379 D+E+ A NVK G+I+L VTK TGE+ GVF+S QPSDTDLGAK P +VKI+G Sbjct: 208 DKEDYA--NVKQTPIGKGSISLQVTKVDQATGEIAGVFDSEQPSDTDLGAKEPVEVKIRG 265 Query: 380 VWYAQL 397 ++YA++ Sbjct: 266 IFYARV 271 Score = 27.7 bits (60), Expect(2) = 1e-30 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +3 Query: 3 TVQLPGGERVPF 38 TVQLPGGE+VPF Sbjct: 136 TVQLPGGEQVPF 147
>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 122 bits (305), Expect(2) = 9e-29 Identities = 69/132 (52%), Positives = 88/132 (66%), Gaps = 10/132 (7%) Frame = +2 Query: 35 VPL--TVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALP 184 +PL TVK LVA+ +P F G F VPSYR ++FLDPKGRG ++GYD+A+ALP Sbjct: 142 IPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP 201 Query: 185 AGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKD 364 + EEELA+ NVK S + G I+L+V K TGE+ G FES Q SD D+GA P + Sbjct: 202 ---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHE 258 Query: 365 VKIQGVWYAQLE 400 VKIQGV+YA +E Sbjct: 259 VKIQGVFYASIE 270 Score = 24.3 bits (51), Expect(2) = 9e-29 Identities = 9/13 (69%), Positives = 11/13 (84%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQ+ GGER+P L Sbjct: 133 TVQMAGGERIPLL 145
>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 122 bits (305), Expect(2) = 9e-29 Identities = 69/132 (52%), Positives = 88/132 (66%), Gaps = 10/132 (7%) Frame = +2 Query: 35 VPL--TVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALP 184 +PL TVK LVA+ +P F G F VPSYR ++FLDPKGRG ++GYD+A+ALP Sbjct: 142 IPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP 201 Query: 185 AGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKD 364 + EEELA+ NVK S + G I+L+V K TGE+ G FES Q SD D+GA P + Sbjct: 202 ---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHE 258 Query: 365 VKIQGVWYAQLE 400 VKIQGV+YA +E Sbjct: 259 VKIQGVFYASIE 270 Score = 24.3 bits (51), Expect(2) = 9e-29 Identities = 9/13 (69%), Positives = 11/13 (84%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TVQ+ GGER+P L Sbjct: 133 TVQMAGGERIPLL 145
>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 277 Score = 114 bits (285), Expect(2) = 5e-27 Identities = 64/127 (50%), Positives = 85/127 (66%), Gaps = 8/127 (6%) Frame = +2 Query: 44 TVKQLVA-TGKPES-------FSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 199 TVK LVA T +P + G + VPSYR S+FLDPK RG +TGY++AVA+P+ G Sbjct: 149 TVKGLVASTSEPATSINTSTDLRGGYRVPSYRTSNFLDPKARGLTTGYESAVAIPSAG-- 206 Query: 200 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQG 379 D E+L KENVK + G I+L+V+K TGEV GVF ++QPSDTD+G K DVK+ G Sbjct: 207 DAEDLTKENVKRFVTGQGEISLAVSKVDGATGEVAGVFTAIQPSDTDMGGKEAVDVKLVG 266 Query: 380 VWYAQLE 400 +Y ++E Sbjct: 267 QFYGRIE 273 Score = 26.2 bits (56), Expect(2) = 5e-27 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = +3 Query: 3 TVQLPGGERVPFL 41 TV LPGGE VPFL Sbjct: 135 TVLLPGGEEVPFL 147
>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 274 Score = 113 bits (282), Expect(2) = 3e-26 Identities = 60/129 (46%), Positives = 79/129 (61%), Gaps = 8/129 (6%) Frame = +2 Query: 44 TVKQLVATGKP--------ESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 199 TVK T +P F G F VPSYRG+ FLDPK RG TGYDNAVALP+ Sbjct: 150 TVKNFTGTTEPGFTSINSSTDFVGDFNVPSYRGAGFLDPKARGLYTGYDNAVALPSAA-- 207 Query: 200 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQG 379 + + N K G ++L VT+ TGE+ G+FES QPSDTDLGAK P DVK++G Sbjct: 208 ---DKFRTNKKETPLGKGTLSLQVTQVDGSTGEIAGIFESEQPSDTDLGAKEPLDVKVRG 264 Query: 380 VWYAQLESN 406 ++Y +++++ Sbjct: 265 IFYGRVDTD 273 Score = 24.6 bits (52), Expect(2) = 3e-26 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = +3 Query: 3 TVQLPGGERVPF 38 TV LPGGE VPF Sbjct: 136 TVLLPGGEEVPF 147
>PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (33 kDa subunit| of oxygen evolving system of photosystem II) (33 kDa thylakoid membrane protein) (Fragments) Length = 26 Score = 40.4 bits (93), Expect = 0.003 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +2 Query: 137 KGRGGSTGYDNAVALPAGGR 196 + +GGSTGYDNAVALPAGGR Sbjct: 7 QSKGGSTGYDNAVALPAGGR 26
>CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 94 Score = 34.3 bits (77), Expect = 0.24 Identities = 23/54 (42%), Positives = 28/54 (51%) Frame = +2 Query: 212 LAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 373 +AKE K G + SV K KP+TGEVI V E + G K P +VKI Sbjct: 13 VAKEEEKTVG---GIVLASVAKEKPQTGEVIAVGEG---RVLENGTKVPMEVKI 60
>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog| Length = 241 Score = 31.2 bits (69), Expect = 2.0 Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +2 Query: 173 VALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES-VQPSDTDLGA 349 V A G EEE A+ K G + L T SKP+ EVIG FES VQ GA Sbjct: 72 VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPD--EVIGYFESFVQNDFARAGA 129 Query: 350 KAP 358 AP Sbjct: 130 VAP 132
>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter| protein containing PH domain, PTB domain and leucine zipper motif 2) Length = 662 Score = 30.8 bits (68), Expect = 2.7 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +2 Query: 191 GRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQ 325 G+ E + +N+KN+ NI T S PET E+I +Q Sbjct: 405 GKKQESSCSSQNIKNSDIEDDNIVPKATASIPETEELIAPGTPIQ 449
>RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B)| Length = 536 Score = 30.8 bits (68), Expect = 2.7 Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 5/89 (5%) Frame = +2 Query: 35 VPLTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD---- 202 V L VKQ+ A F++ R S L G G + G A L AGGRGD Sbjct: 416 VDLGVKQIAAEFL-------FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYS 468 Query: 203 -EEELAKENVKNASSSTGNITLSVTKSKP 286 +E+ E KNA + IT + + P Sbjct: 469 EDEDTDTEEYKNAKPNINLITGHLEEPMP 497
>RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)| Length = 560 Score = 30.8 bits (68), Expect = 2.7 Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 5/89 (5%) Frame = +2 Query: 35 VPLTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD---- 202 V L VKQ+ A F++ R S L G G + G A L AGGRGD Sbjct: 416 VDLGVKQIAAEFL-------FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYS 468 Query: 203 -EEELAKENVKNASSSTGNITLSVTKSKP 286 +E+ E KNA + IT + + P Sbjct: 469 EDEDTDTEEYKNAKPNINLITGHLEEPMP 497
>MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) (Nuclear receptor-binding factor 1) (NRBF-1) Length = 373 Score = 30.0 bits (66), Expect = 4.5 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = +2 Query: 323 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVK--ILIFCACIR 454 QP + KD+K++G W +Q + N S E K ILI C IR Sbjct: 291 QPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILILCNLIR 336
>MUTL_HALSA (Q9HSM6) DNA mismatch repair protein mutL| Length = 659 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = -1 Query: 97 EGPAEALRLAGGDELLD--GKRNGTRSPPGSCT 5 E PA A GGDE D +GTR PGS T Sbjct: 389 ESPASAFETGGGDEAADSAASTDGTRERPGSGT 421
>LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA| Length = 598 Score = 29.6 bits (65), Expect = 5.9 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = -2 Query: 447 HAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSDGCTLSKTPITSPVSGLLLVT 268 +A ++ IFT + D W++ ++ + V D TL++ P P+ G V Sbjct: 233 NADRLGIFTPKRVDRDVLGCGEVGWLVCAIKDILGAPVGDTLTLARQPAEKPLPGFKKVK 292 Query: 267 LRV---MLPVEEDAFFTF 223 +V + PV D + F Sbjct: 293 PQVYAGLFPVSSDDYEAF 310
>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)| Length = 644 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/77 (24%), Positives = 36/77 (46%) Frame = -2 Query: 507 YTHKHIVASILSSPPTNPRMHAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSD 328 Y H S ++ PP P + Q+M+ TS+ ++ PW +S A+ P + S Sbjct: 474 YQHSTSAGSSVNPPPPPPPLFQQQMTTTTSSA----AASFVEQPWSSSSSRAIQPATTS- 528 Query: 327 GCTLSKTPITSPVSGLL 277 + S + +SP + ++ Sbjct: 529 ASSSSSSSASSPAAAVV 545
>MECR_MOUSE (Q9DCS3) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) Length = 373 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +2 Query: 323 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVKILIFCAC 448 QP + KD+K++G W +Q + N S E K LI C Sbjct: 291 QPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLC 332
>PRDM8_MOUSE (Q8BZ97) PR domain zinc finger protein 8 (PR domain-containing| protein 8) Length = 687 Score = 29.3 bits (64), Expect = 7.8 Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 7/96 (7%) Frame = +2 Query: 113 RGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPET 292 RGS+F GG G A AGG G + A + K+A S S ++ P Sbjct: 460 RGSAFTSVSQLGGGGGAGTAGT--AGGSGGGQTAASDERKSAFSQPAR---SFSQLSPLV 514 Query: 293 -GEVIGVFESVQPSD----TDL--GAKAPKDVKIQG 379 G+ +G E P D T L A P VK+QG Sbjct: 515 LGQKLGALEPCHPGDGVGPTRLYPAAADPLAVKLQG 550 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,203,037 Number of Sequences: 219361 Number of extensions: 1293361 Number of successful extensions: 5616 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 5416 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5603 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
