ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25o01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071943.1| Oryza sativa (japonica cultivar-group) cDNA clon... 446 e-122
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
3dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
4dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
5gb|AY110244.1| Zea mays CL30761_1 mRNA sequence 80 8e-12
6gb|BT013894.1| Lycopersicon esculentum clone 132881F, mRNA sequence 72 2e-09
7ref|NM_112487.3| Arabidopsis thaliana AMP binding / catalytic AT... 68 3e-08
8gb|BT000771.1| Arabidopsis thaliana clone RAFL08-14-H03 (R11349)... 68 3e-08
9gb|AY250842.1| Arabidopsis thaliana acyl-activating enzyme 13 (A... 68 3e-08
10gb|AY050378.1| Arabidopsis thaliana AT3g16170/MSL1_21 mRNA, comp... 68 3e-08
11gb|AY084636.1| Arabidopsis thaliana clone 113798 mRNA, complete ... 68 3e-08
12emb|BX823446.1|CNS0A5CA Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
13gb|DQ455237.1| Medicago truncatula cDNA-AFLP fragment BC43M23_16... 54 4e-04
14emb|CR848706.10| Zebrafish DNA sequence from clone CH211-113K17 ... 48 0.027
15ref|XM_685690.1| PREDICTED: Danio rerio similar to AMP-dependent... 48 0.027
16emb|AL954337.9| Zebrafish DNA sequence from clone CH211-223J10 i... 48 0.027
17dbj|AB012247.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.43
18gb|AC148360.10| Medicago truncatula clone mth2-27i5, complete se... 42 1.7
19emb|AL928570.14| Mouse DNA sequence from clone RP23-183A10 on ch... 42 1.7
20ref|XM_472590.1| Oryza sativa (japonica cultivar-group), predic... 40 6.6
21gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 6.6
22gb|AC122190.4| Mus musculus BAC clone RP23-41J14 from 12, comple... 40 6.6
23gb|AC116325.5| Mus musculus BAC clone RP23-295K3 from 10, comple... 40 6.6
24emb|AL035064.1|SPAC1687 S.pombe chromosome I cosmid c1687 40 6.6
25dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
26gb|AC102022.8| Mus musculus chromosome 8, clone RP24-67K5, compl... 40 6.6
27gb|AC064863.5| Homo sapiens BAC clone RP11-392M11 from 2, comple... 40 6.6
28dbj|AK068725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
29gb|AC122205.6| Mus musculus BAC clone RP23-76C13 from chromosome... 40 6.6
30gb|AC104867.18| Mus musculus chromosome 18, clone RP24-320L19, c... 40 6.6
31gb|AC163357.5| Mus musculus BAC clone RP23-3K10 from chromosome ... 40 6.6
32emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4,... 40 6.6
33gb|AC138027.3| Mus musculus BAC clone RP24-100L8 from 12, comple... 40 6.6
34gb|AC140338.3| Mus musculus BAC clone RP23-240M3 from 10, comple... 40 6.6
35gb|L29449.1|YSPPRKI Schizosaccharomyces pombe (clone: 16H3) prot... 40 6.6 
>dbj|AK071943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087E02, full
           insert sequence
          Length = 1223

 Score =  446 bits (225), Expect = e-122
 Identities = 388/441 (87%), Gaps = 1/441 (0%)
 Strand = Plus / Plus

                                                                       
Query: 8   ttcaatgctctatttgcgcccctctattcaggnatcagtggttgagtttatgccaaaatt 67
           ||||||||||||||||| ||||||||||| || ||||||||||||||| ||||| |||||
Sbjct: 65  ttcaatgctctatttgcacccctctattctgg-atcagtggttgagttcatgccgaaatt 123

                                                                       
Query: 68  cagtgtgaggggagtatggcagagatggtgtgagtcatatcccaagggcaccagtaaaaa 127
            |||||||||||| |||||||||| ||| ||||||||||||||||      |||||||||
Sbjct: 124 tagtgtgaggggaatatggcagaggtggcgtgagtcatatcccaacaatggcagtaaaaa 183

                                                                       
Query: 128 tgatgaggctattaccgtatttactggagttccaacagtgtacacacgcctactgcaagg 187
           |||||| || ||||| ||||||||||||||||||||| |||||||||| ||| |||||||
Sbjct: 184 tgatgaagcaattacagtatttactggagttccaacaatgtacacacggctattgcaagg 243

                                                                       
Query: 188 gtacgatagtatgaatcctgatcaacaatctgcctgttcttacgctgcaaagcagctgag 247
           ||| ||| ||||| ||||||| ||||| ||||| | ||| |  |||||||||||  ||||
Sbjct: 244 gtatgatggtatggatcctgaacaacagtctgcatcttcctttgctgcaaagcaattgag 303

                                                                       
Query: 248 actaatgatgtgtggatcctcagcactcccttctccactcatgaaacggtgggaggaagt 307
            ||||||||||||||||| || || || ||||| ||||| ||||||||||||||||||||
Sbjct: 304 gctaatgatgtgtggatcatcggcccttccttccccacttatgaaacggtgggaggaagt 363

                                                                       
Query: 308 gacatgccaccgtcttttggaacgctatggcatgactgagtttgtcatggcactgtctaa 367
           |||| | ||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 364 gacaggtcaccgtcttttggaacgatacggcatgactgagtttgtcatggcactgtctaa 423

                                                                       
Query: 368 tccattgcatggtgcacggaaagaaggtacagtcggtaaacctcttccacgtgttgaggc 427
            ||||||||||||||||| |||||||||||||| || ||||| |||||  ||||||||||
Sbjct: 424 cccattgcatggtgcacgtaaagaaggtacagttggcaaaccgcttccgtgtgttgaggc 483

                                
Query: 428 caagatcattatggatgatgg 448
           |||||| |||||||| |||||
Sbjct: 484 caagattattatggaggatgg 504
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  107 bits (54), Expect = 3e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                            
Query: 254      gatgtgtggatcctcagcactcccttctccactcatgaaacggtgggaggaagtgacatg 313
                |||||||||||| || || || ||||| ||||| |||||||||||||||||||||||| |
Sbjct: 32023515 gatgtgtggatcatcggcccttccttccccacttatgaaacggtgggaggaagtgacagg 32023574

                                                  
Query: 314      ccaccgtcttttggaacgctatggcatgactgag 347
                 ||||||||||||||||| || ||||||||||||
Sbjct: 32023575 tcaccgtcttttggaacgatacggcatgactgag 32023608



 Score =  105 bits (53), Expect = 1e-19
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                            
Query: 346      agtttgtcatggcactgtctaatccattgcatggtgcacggaaagaaggtacagtcggta 405
                |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || |
Sbjct: 32023698 agtttgtcatggcactgtctaacccattgcatggtgcacgtaaagaaggtacagttggca 32023757

                                     
Query: 406      aacctcttccacgtgttgagg 426
                |||| |||||  |||||||||
Sbjct: 32023758 aaccgcttccgtgtgttgagg 32023778



 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                            
Query: 47       ggttgagtttatgccaaaattcagtgtgaggggagtatggcagagatggtgtgagtcata 106
                ||||||||| ||||| ||||| |||||||||||| |||||||||| ||| ||||||||||
Sbjct: 32022566 ggttgagttcatgccgaaatttagtgtgaggggaatatggcagaggtggcgtgagtcata 32022625

                                                                   
Query: 107      tcccaagggcaccagtaaaaatgatgaggctattaccgtatttactggagt 157
                ||||||      ||||||||||||||| || ||||| ||||||||||||||
Sbjct: 32022626 tcccaacaatggcagtaaaaatgatgaagcaattacagtatttactggagt 32022676



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                            
Query: 156      gttccaacagtgtacacacgcctactgcaagggtacgatagtatgaatcctgatcaacaa 215
                ||||||||| |||||||||| ||| |||||||||| ||| ||||| ||||||| ||||| 
Sbjct: 32022783 gttccaacaatgtacacacggctattgcaagggtatgatggtatggatcctgaacaacag 32022842

                                                       
Query: 216      tctgcctgttcttacgctgcaaagcagctgagactaatg 254
                ||||| | ||| |  |||||||||||  |||| ||||||
Sbjct: 32022843 tctgcatcttcctttgctgcaaagcaattgaggctaatg 32022881



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 39/42 (92%), Gaps = 1/42 (2%)
 Strand = Plus / Plus

                                                          
Query: 8        ttcaatgctctatttgcgcccctctattcaggnatcagtggt 49
                ||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 32022289 ttcaatgctctatttgcacccctctattctgg-atcagtggt 32022329
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>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0512C01
          Length = 176261

 Score =  107 bits (54), Expect = 3e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                         
Query: 254   gatgtgtggatcctcagcactcccttctccactcatgaaacggtgggaggaagtgacatg 313
             |||||||||||| || || || ||||| ||||| |||||||||||||||||||||||| |
Sbjct: 65329 gatgtgtggatcatcggcccttccttccccacttatgaaacggtgggaggaagtgacagg 65388

                                               
Query: 314   ccaccgtcttttggaacgctatggcatgactgag 347
              ||||||||||||||||| || ||||||||||||
Sbjct: 65389 tcaccgtcttttggaacgatacggcatgactgag 65422



 Score =  105 bits (53), Expect = 1e-19
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                         
Query: 346   agtttgtcatggcactgtctaatccattgcatggtgcacggaaagaaggtacagtcggta 405
             |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || |
Sbjct: 65512 agtttgtcatggcactgtctaacccattgcatggtgcacgtaaagaaggtacagttggca 65571

                                  
Query: 406   aacctcttccacgtgttgagg 426
             |||| |||||  |||||||||
Sbjct: 65572 aaccgcttccgtgtgttgagg 65592



 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                         
Query: 47    ggttgagtttatgccaaaattcagtgtgaggggagtatggcagagatggtgtgagtcata 106
             ||||||||| ||||| ||||| |||||||||||| |||||||||| ||| ||||||||||
Sbjct: 64380 ggttgagttcatgccgaaatttagtgtgaggggaatatggcagaggtggcgtgagtcata 64439

                                                                
Query: 107   tcccaagggcaccagtaaaaatgatgaggctattaccgtatttactggagt 157
             ||||||      ||||||||||||||| || ||||| ||||||||||||||
Sbjct: 64440 tcccaacaatggcagtaaaaatgatgaagcaattacagtatttactggagt 64490



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 39/42 (92%), Gaps = 1/42 (2%)
 Strand = Plus / Plus

                                                       
Query: 8     ttcaatgctctatttgcgcccctctattcaggnatcagtggt 49
             ||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 64103 ttcaatgctctatttgcacccctctattctgg-atcagtggt 64143
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>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0460E08
          Length = 170021

 Score =  107 bits (54), Expect = 3e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                          
Query: 254    gatgtgtggatcctcagcactcccttctccactcatgaaacggtgggaggaagtgacatg 313
              |||||||||||| || || || ||||| ||||| |||||||||||||||||||||||| |
Sbjct: 120242 gatgtgtggatcatcggcccttccttccccacttatgaaacggtgggaggaagtgacagg 120301

                                                
Query: 314    ccaccgtcttttggaacgctatggcatgactgag 347
               ||||||||||||||||| || ||||||||||||
Sbjct: 120302 tcaccgtcttttggaacgatacggcatgactgag 120335



 Score =  105 bits (53), Expect = 1e-19
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                          
Query: 346    agtttgtcatggcactgtctaatccattgcatggtgcacggaaagaaggtacagtcggta 405
              |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || |
Sbjct: 120425 agtttgtcatggcactgtctaacccattgcatggtgcacgtaaagaaggtacagttggca 120484

                                   
Query: 406    aacctcttccacgtgttgagg 426
              |||| |||||  |||||||||
Sbjct: 120485 aaccgcttccgtgtgttgagg 120505



 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                          
Query: 47     ggttgagtttatgccaaaattcagtgtgaggggagtatggcagagatggtgtgagtcata 106
              ||||||||| ||||| ||||| |||||||||||| |||||||||| ||| ||||||||||
Sbjct: 119293 ggttgagttcatgccgaaatttagtgtgaggggaatatggcagaggtggcgtgagtcata 119352

                                                                 
Query: 107    tcccaagggcaccagtaaaaatgatgaggctattaccgtatttactggagt 157
              ||||||      ||||||||||||||| || ||||| ||||||||||||||
Sbjct: 119353 tcccaacaatggcagtaaaaatgatgaagcaattacagtatttactggagt 119403



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 39/42 (92%), Gaps = 1/42 (2%)
 Strand = Plus / Plus

                                                        
Query: 8      ttcaatgctctatttgcgcccctctattcaggnatcagtggt 49
              ||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 119016 ttcaatgctctatttgcacccctctattctgg-atcagtggt 119056
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>gb|AY110244.1| Zea mays CL30761_1 mRNA sequence
          Length = 781

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 387 aaagaaggtacagtcggtaaacctcttccacgtgttgaggccaagatcattatgga 442
           |||||||||||||  |||||||||||||||||  ||||||||||||||||||||||
Sbjct: 763 aaagaaggtacaggtggtaaacctcttccacgcattgaggccaagatcattatgga 708
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>gb|BT013894.1| Lycopersicon esculentum clone 132881F, mRNA sequence
          Length = 2153

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                               
Query: 58  tgccaaaattcagtgtgaggggagtatggcagagatggtgtgagtcatatcc 109
           ||||||||||||||||||||||| | |||||||||||| |||| ||||||||
Sbjct: 914 tgccaaaattcagtgtgaggggaatttggcagagatggcgtgaatcatatcc 965



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                           
Query: 324  ttggaacgctatggcatgactgagtttgtcatggcactgtctaatcc 370
            |||||||| |||||||||||||||||||| |||||| | ||||||||
Sbjct: 1180 ttggaacgttatggcatgactgagtttgtgatggcaatctctaatcc 1226
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>ref|NM_112487.3| Arabidopsis thaliana AMP binding / catalytic AT3G16170 mRNA, complete
            cds
          Length = 1980

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                        
Query: 318  cgtcttttggaacgctatggcatgactgagtttgtcatggcactgtctaatccattgcat 377
            |||||||||||| | |||||||||||||||||||| |||||| |||| || || || |  
Sbjct: 1159 cgtcttttggaaagatatggcatgactgagtttgtaatggcaatgtcaaaccccttacgg 1218

                                                  
Query: 378  ggtgcacggaaagaaggtacagtcggtaaacctcttcc 415
            |||||||| || | |||||| ||||| ||||| |||||
Sbjct: 1219 ggtgcacgaaatgcaggtactgtcggcaaaccgcttcc 1256



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 144  gtatttactggagttccaacagtgtacac 172
            ||||||||||||||||||||  |||||||
Sbjct: 985  gtatttactggagttccaaccatgtacac 1013
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>gb|BT000771.1| Arabidopsis thaliana clone RAFL08-14-H03 (R11349) putative long-chain
            acyl-CoA synthetase (At3g16170) mRNA, complete cds
          Length = 1943

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                        
Query: 318  cgtcttttggaacgctatggcatgactgagtttgtcatggcactgtctaatccattgcat 377
            |||||||||||| | |||||||||||||||||||| |||||| |||| || || || |  
Sbjct: 1105 cgtcttttggaaagatatggcatgactgagtttgtaatggcaatgtcaaaccccttacgg 1164

                                                  
Query: 378  ggtgcacggaaagaaggtacagtcggtaaacctcttcc 415
            |||||||| || | |||||| ||||| ||||| |||||
Sbjct: 1165 ggtgcacgaaatgcaggtactgtcggcaaaccgcttcc 1202



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 144 gtatttactggagttccaacagtgtacac 172
           ||||||||||||||||||||  |||||||
Sbjct: 931 gtatttactggagttccaaccatgtacac 959
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>gb|AY250842.1| Arabidopsis thaliana acyl-activating enzyme 13 (At3g16170) mRNA,
            complete cds
          Length = 1635

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                        
Query: 318  cgtcttttggaacgctatggcatgactgagtttgtcatggcactgtctaatccattgcat 377
            |||||||||||| | |||||||||||||||||||| |||||| |||| || || || |  
Sbjct: 988  cgtcttttggaaagatatggcatgactgagtttgtaatggcaatgtcaaaccccttacgg 1047

                                                  
Query: 378  ggtgcacggaaagaaggtacagtcggtaaacctcttcc 415
            |||||||| || | |||||| ||||| ||||| |||||
Sbjct: 1048 ggtgcacgaaatgcaggtactgtcggcaaaccgcttcc 1085



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 144 gtatttactggagttccaacagtgtacac 172
           ||||||||||||||||||||  |||||||
Sbjct: 814 gtatttactggagttccaaccatgtacac 842
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>gb|AY050378.1| Arabidopsis thaliana AT3g16170/MSL1_21 mRNA, complete cds
          Length = 1568

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                        
Query: 318  cgtcttttggaacgctatggcatgactgagtttgtcatggcactgtctaatccattgcat 377
            |||||||||||| | |||||||||||||||||||| |||||| |||| || || || |  
Sbjct: 1108 cgtcttttggaaagatatggcatgactgagtttgtaatggcaatgtcaaaccccttacgg 1167

                                                  
Query: 378  ggtgcacggaaagaaggtacagtcggtaaacctcttcc 415
            |||||||| || | |||||| ||||| ||||| |||||
Sbjct: 1168 ggtgcacgaaatgcaggtactgtcggcaaaccgcttcc 1205



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 144 gtatttactggagttccaacagtgtacac 172
           ||||||||||||||||||||  |||||||
Sbjct: 934 gtatttactggagttccaaccatgtacac 962
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>gb|AY084636.1| Arabidopsis thaliana clone 113798 mRNA, complete sequence
          Length = 1896

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                        
Query: 318  cgtcttttggaacgctatggcatgactgagtttgtcatggcactgtctaatccattgcat 377
            |||||||||||| | |||||||||||||||||||| |||||| |||| || || || |  
Sbjct: 1110 cgtcttttggaaagatatggcatgactgagtttgtaatggcaatgtcaaaccccttacgg 1169

                                                  
Query: 378  ggtgcacggaaagaaggtacagtcggtaaacctcttcc 415
            |||||||| || | |||||| ||||| ||||| |||||
Sbjct: 1170 ggtgcacgaaaggcaggtactgtcggcaaaccgcttcc 1207



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 144 gtatttactggagttccaacagtgtacac 172
           ||||||||||||||||||||  |||||||
Sbjct: 936 gtatttactggagttccaaccatgtacac 964
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>emb|BX823446.1|CNS0A5CA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS3ZD04 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1920

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                           
Query: 318  cgtcttttggaacgctatggcatgactgagtttgtcatggcactgtc 364
            |||||||||||| | |||||||||||||||||||| |||||| ||||
Sbjct: 1149 cgtcttttggaaagatatggcatgactgagtttgtaatggcaatgtc 1195
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>gb|DQ455237.1| Medicago truncatula cDNA-AFLP fragment BC43M23_168 sequence
          Length = 247

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 324 ttggaacgctatggcatgactgagtttgtcatggcactgtctaatccattg 374
           ||||| || |||||||||||||| |||||||||||  |||| |||||||||
Sbjct: 83  ttggagcgatatggcatgactgaatttgtcatggcgttgtcaaatccattg 133



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 249 ctaatgatgtgtggatcctcagcact 274
           |||||||||||||||||||| |||||
Sbjct: 8   ctaatgatgtgtggatcctctgcact 33
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>emb|CR848706.10| Zebrafish DNA sequence from clone CH211-113K17 in linkage group 7,
             complete sequence
          Length = 150558

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 330   cgctatggcatgactgagtttgtcatggcact 361
             |||||||||||||||||| ||| |||||||||
Sbjct: 41834 cgctatggcatgactgagattggcatggcact 41803
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>ref|XM_685690.1| PREDICTED: Danio rerio similar to AMP-dependent synthetase and ligase
            family member (5D567) (LOC562292), mRNA
          Length = 1740

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 330  cgctatggcatgactgagtttgtcatggcact 361
            |||||||||||||||||| ||| |||||||||
Sbjct: 1084 cgctatggcatgactgagattggcatggcact 1115
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>emb|AL954337.9| Zebrafish DNA sequence from clone CH211-223J10 in linkage group 19,
             complete sequence
          Length = 205289

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 330   cgctatggcatgactgagtttgtcatggcact 361
             |||||||||||||||||| ||| |||||||||
Sbjct: 85601 cgctatggcatgactgagattggcatggcact 85570
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>dbj|AB012247.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSL1
          Length = 79355

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 318   cgtcttttggaacgctatggcatgactgag 347
             |||||||||||| | |||||||||||||||
Sbjct: 71011 cgtcttttggaaagatatggcatgactgag 71040
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>gb|AC148360.10| Medicago truncatula clone mth2-27i5, complete sequence
          Length = 113746

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 397    cagtcggtaaacctcttccac 417
              |||||||||||||||||||||
Sbjct: 108111 cagtcggtaaacctcttccac 108091
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>emb|AL928570.14| Mouse DNA sequence from clone RP23-183A10 on chromosome X, complete
             sequence
          Length = 91550

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 287   catgaaacggtgggaggaagtgaca 311
             ||||||| |||||||||||||||||
Sbjct: 40744 catgaaagggtgggaggaagtgaca 40720
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>ref|XM_472590.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2130

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 109 ccaagggcaccagtaaaaatgatg 132
           |||||| |||||||||||||||||
Sbjct: 751 ccaaggtcaccagtaaaaatgatg 774
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 443     tgatggtacagaaactaaag 462
               ||||||||||||||||||||
Sbjct: 2981885 tgatggtacagaaactaaag 2981904
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>gb|AC122190.4| Mus musculus BAC clone RP23-41J14 from 12, complete sequence
          Length = 179390

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   gatcctcagcactcccttct 281
             ||||||||||||||||||||
Sbjct: 62903 gatcctcagcactcccttct 62922
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>gb|AC116325.5| Mus musculus BAC clone RP23-295K3 from 10, complete sequence
          Length = 196265

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   gcaccagtaaaaatgatgag 134
             ||||||||||||||||||||
Sbjct: 22781 gcaccagtaaaaatgatgag 22800
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>emb|AL035064.1|SPAC1687 S.pombe chromosome I cosmid c1687
          Length = 41757

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 433   tcattatggatgatggtacagaaa 456
             ||||||||||||||| ||||||||
Sbjct: 26679 tcattatggatgatgatacagaaa 26656
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 109      ccaagggcaccagtaaaaatgatg 132
                |||||| |||||||||||||||||
Sbjct: 21765282 ccaaggtcaccagtaaaaatgatg 21765259
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>gb|AC102022.8| Mus musculus chromosome 8, clone RP24-67K5, complete sequence
          Length = 156728

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   cctcagcactcccttctcca 284
             ||||||||||||||||||||
Sbjct: 74029 cctcagcactcccttctcca 74048
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>gb|AC064863.5| Homo sapiens BAC clone RP11-392M11 from 2, complete sequence
          Length = 156289

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    tgggaggaagtgacatgcca 316
              ||||||||||||||||||||
Sbjct: 100565 tgggaggaagtgacatgcca 100546
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>dbj|AK068725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158E14, full
           insert sequence
          Length = 2603

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 109 ccaagggcaccagtaaaaatgatg 132
           |||||| |||||||||||||||||
Sbjct: 889 ccaaggtcaccagtaaaaatgatg 912
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>gb|AC122205.6| Mus musculus BAC clone RP23-76C13 from chromosome 8, complete
            sequence
          Length = 249808

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  cctcagcactcccttctcca 284
            ||||||||||||||||||||
Sbjct: 7605 cctcagcactcccttctcca 7586
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>gb|AC104867.18| Mus musculus chromosome 18, clone RP24-320L19, complete sequence
          Length = 148876

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   aagcagctgagactaatgat 256
             ||||||||||||||||||||
Sbjct: 66753 aagcagctgagactaatgat 66734
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>gb|AC163357.5| Mus musculus BAC clone RP23-3K10 from chromosome 12, complete sequence
          Length = 236266

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   gatcctcagcactcccttct 281
             ||||||||||||||||||||
Sbjct: 58876 gatcctcagcactcccttct 58857
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>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20,
             complete sequence
          Length = 141915

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   ccaagggcaccagtaaaaatgatg 132
             |||||| |||||||||||||||||
Sbjct: 76899 ccaaggtcaccagtaaaaatgatg 76876
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>gb|AC138027.3| Mus musculus BAC clone RP24-100L8 from 12, complete sequence
          Length = 201839

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    cctcagcactcccttctcca 284
              ||||||||||||||||||||
Sbjct: 164650 cctcagcactcccttctcca 164669
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>gb|AC140338.3| Mus musculus BAC clone RP23-240M3 from 10, complete sequence
          Length = 232876

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    gcaccagtaaaaatgatgag 134
              ||||||||||||||||||||
Sbjct: 118059 gcaccagtaaaaatgatgag 118040
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>gb|L29449.1|YSPPRKI Schizosaccharomyces pombe (clone: 16H3) protein kinase (skp1+)
           gene, complete cds
          Length = 2165

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 433 tcattatggatgatggtacagaaa 456
           ||||||||||||||| ||||||||
Sbjct: 220 tcattatggatgatgatacagaaa 197


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,878,287
Number of Sequences: 3902068
Number of extensions: 3878287
Number of successful extensions: 65735
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65618
Number of HSP's gapped (non-prelim): 116
length of query: 491
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 469
effective length of database: 17,147,199,772
effective search space: 8042036693068
effective search space used: 8042036693068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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