ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25n17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_469565.1| Oryza sativa (japonica cultivar-group), mRNA 414 e-112
2dbj|AK069120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 406 e-110
3gb|AY108853.1| Zea mays PCO085330 mRNA sequence 192 9e-46
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 176 5e-41
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 176 5e-41
6gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 geno... 176 5e-41
7gb|BT018484.1| Zea mays clone EL01N0424D05.d mRNA sequence 117 4e-23
8gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence 111 3e-21
9ref|XM_481724.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.13
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
11dbj|AP004706.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
12dbj|AP004621.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
13ref|XM_367392.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 2.1
14gb|AC124998.10| Mus musculus chromosome 10, clone RP24-350B12, c... 42 2.1
15emb|CR713709.2|CNS0GDND Tetraodon nigroviridis full-length cDNA 42 2.1
16gb|AC109136.1| Homo sapiens chromosome 16 clone RP11-629D22, com... 42 2.1
17emb|AL772184.3| Tetraodon DNA sequence from clone XX-C0AA012DF08... 42 2.1
18gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's... 40 8.2
19gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosom... 40 8.2
20gb|AC123826.4| Mus musculus BAC clone RP24-97K3 from chromosome ... 40 8.2
21emb|Z95397.2|SPBC25H2 S.pombe chromosome II cosmid c25H2 40 8.2
22emb|Z26255.1|TPNARHPAR T.pantotropha putative narG, H, J, I genes 40 8.2
23gb|AE012167.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 8.2
24ref|NM_136694.1| Drosophila melanogaster CG15863-RA (CG15863), mRNA 40 8.2
25dbj|AK146028.1| Mus musculus 14 days pregnant adult female amnio... 40 8.2
26dbj|AK166167.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cD... 40 8.2
27gb|AC007414.6| Drosophila melanogaster, chromosome 2R, region 46... 40 8.2
28gb|BT023615.1| Drosophila melanogaster IP05962 full insert cDNA 40 8.2
29gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 8.2
30gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, r... 40 8.2
31gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19... 40 8.2
32gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome 40 8.2

>ref|XM_469565.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1833

 Score =  414 bits (209), Expect = e-112
 Identities = 425/497 (85%)
 Strand = Plus / Plus

                                                                       
Query: 93  atggcgtcgtctgtgctggaggccacgcgggcggcgcacgaggacctcgagcggttggag 152
           ||||||||| | ||||||||||| |||||||||  |||||||||| | ||| || |||||
Sbjct: 65  atggcgtcgacggtgctggaggcgacgcgggcgaagcacgaggacatggagaggctggag 124

                                                                       
Query: 153 cgcctggcggtgcgcgagcttcagcgcgaacccgccaacgcgcgcgaccgcctcttccag 212
           || ||||||||||| ||||| ||||| || ||||||||||||||||||||||||| ||||
Sbjct: 125 cggctggcggtgcgggagctgcagcgggagcccgccaacgcgcgcgaccgcctctaccag 184

                                                                       
Query: 213 tcccaccgcgtccgtcacatgctcgatctcgtcgtctccacttccgacaagctggtggaa 272
           ||||||||||| || ||||||||||| |||||| ||||||| |||| |||||| ||||||
Sbjct: 185 tcccaccgcgtgcgccacatgctcgacctcgtcatctccacctccggcaagctcgtggaa 244

                                                                       
Query: 273 atctatgaagacaaggacggtgctaggaaggatgagatgtccacccatcttaccgcgccg 332
           ||||| || ||||||||   |||||||||||||||||| |||| ||||||||   |  | 
Sbjct: 245 atctacgaggacaaggataatgctaggaaggatgagatctccaaccatcttagttccaca 304

                                                                       
Query: 333 gtgcaaactgacatcttccccaagtactatgaaaggctgaaagagattcgtgattaccat 392
           |||||| |||| ||||| || |||| |||||| ||||| |||||||| ||||||||||||
Sbjct: 305 gtgcaagctgaaatctttccaaagttctatgacaggctcaaagagatccgtgattaccat 364

                                                                       
Query: 393 agaaggaatcaatctgcccgcttcgtcagtgaaagtgatgattatgaggagctactaaag 452
           ||  | ||||  |||||||| ||||| |||| || ||||||||  || ||||||||||||
Sbjct: 365 aggcgtaatccttctgcccgtttcgttagtgcaactgatgatttcgaagagctactaaag 424

                                                                       
Query: 453 gaggaaccgactattgaattcactggcgaggaagcatttggccggtacttggacttacat 512
           ||||||||| |||||||||||||||| |||||||| |||||||| ||| ||||||| |||
Sbjct: 425 gaggaaccggctattgaattcactggagaggaagcttttggccgatacctggacttgcat 484

                                                                       
Query: 513 gagctctataacgagttcataaattcaaagtttggatcactattggaatactcagcatac 572
           ||||| || || |||||||||||||| ||||||||| | | | |||||||||||||||| 
Sbjct: 485 gagctttacaatgagttcataaattccaagtttggaactccaatggaatactcagcatat 544

                            
Query: 573 gttggcacttttgctca 589
           |||||||| ||| ||||
Sbjct: 545 gttggcaccttttctca 561



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>dbj|AK069120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004K20, full
           insert sequence
          Length = 1891

 Score =  406 bits (205), Expect = e-110
 Identities = 424/497 (85%)
 Strand = Plus / Plus

                                                                       
Query: 93  atggcgtcgtctgtgctggaggccacgcgggcggcgcacgaggacctcgagcggttggag 152
           ||||||||| | ||||||||||| |||||||||  |||||||||| | ||| || |||||
Sbjct: 123 atggcgtcgacggtgctggaggcgacgcgggcgaagcacgaggacatggagaggctggag 182

                                                                       
Query: 153 cgcctggcggtgcgcgagcttcagcgcgaacccgccaacgcgcgcgaccgcctcttccag 212
           || ||||||||||| ||||| ||||| || ||||||||| ||||||||||||||| ||||
Sbjct: 183 cggctggcggtgcgggagctgcagcgggagcccgccaacacgcgcgaccgcctctaccag 242

                                                                       
Query: 213 tcccaccgcgtccgtcacatgctcgatctcgtcgtctccacttccgacaagctggtggaa 272
           ||||||||||| || ||||||||||| |||||| ||||||| |||| |||||| ||||||
Sbjct: 243 tcccaccgcgtgcgccacatgctcgacctcgtcatctccacctccggcaagctcgtggaa 302

                                                                       
Query: 273 atctatgaagacaaggacggtgctaggaaggatgagatgtccacccatcttaccgcgccg 332
           ||||| || ||||||||   |||||||||||||||||| |||| ||||||||   |  | 
Sbjct: 303 atctacgaggacaaggataatgctaggaaggatgagatctccaaccatcttagttccaca 362

                                                                       
Query: 333 gtgcaaactgacatcttccccaagtactatgaaaggctgaaagagattcgtgattaccat 392
           |||||| |||| ||||| || |||| |||||| ||||| |||||||| ||||||||||||
Sbjct: 363 gtgcaagctgaaatctttccaaagttctatgacaggctcaaagagatccgtgattaccat 422

                                                                       
Query: 393 agaaggaatcaatctgcccgcttcgtcagtgaaagtgatgattatgaggagctactaaag 452
           ||  | ||||  |||||||| ||||| |||| || ||||||||  || ||||||||||||
Sbjct: 423 aggcgtaatccttctgcccgtttcgttagtgcaactgatgatttcgaagagctactaaag 482

                                                                       
Query: 453 gaggaaccgactattgaattcactggcgaggaagcatttggccggtacttggacttacat 512
           ||||||||| |||||||||||||||| |||||||| |||||||| ||| ||||||| |||
Sbjct: 483 gaggaaccggctattgaattcactggagaggaagcttttggccgatacctggacttgcat 542

                                                                       
Query: 513 gagctctataacgagttcataaattcaaagtttggatcactattggaatactcagcatac 572
           ||||| || || |||||||||||||| ||||||||| | | | |||||||||||||||| 
Sbjct: 543 gagctttacaatgagttcataaattccaagtttggaactccaatggaatactcagcatat 602

                            
Query: 573 gttggcacttttgctca 589
           |||||||| ||| ||||
Sbjct: 603 gttggcaccttttctca 619



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>gb|AY108853.1| Zea mays PCO085330 mRNA sequence
          Length = 901

 Score =  192 bits (97), Expect = 9e-46
 Identities = 190/221 (85%)
 Strand = Plus / Plus

                                                                       
Query: 90  gccatggcgtcgtctgtgctggaggccacgcgggcggcgcacgaggacctcgagcggttg 149
           |||||||||||  | ||||||||||| ||||||||||| || ||||| || ||| || ||
Sbjct: 185 gccatggcgtcaacggtgctggaggcgacgcgggcggcccatgaggatctggagaggctg 244

                                                                       
Query: 150 gagcgcctggcggtgcgcgagcttcagcgcgaacccgccaacgcgcgcgaccgcctcttc 209
           ||||| || |||||| ||||||| || || || ||||| ||| |||| ||||||||||| 
Sbjct: 245 gagcggctcgcggtgagcgagctgcaacgggagcccgctaacccgcgtgaccgcctcttt 304

                                                                       
Query: 210 cagtcccaccgcgtccgtcacatgctcgatctcgtcgtctccacttccgacaagctggtg 269
           ||||||||||||||||| ||||||||||| |||||||||||||| |||| |||||| |||
Sbjct: 305 cagtcccaccgcgtccgccacatgctcgacctcgtcgtctccacctccggcaagctcgtg 364

                                                    
Query: 270 gaaatctatgaagacaaggacggtgctaggaaggatgagat 310
           ||||| || || |||||||||  ||||||||||||||||||
Sbjct: 365 gaaatttacgaggacaaggacaatgctaggaaggatgagat 405



 Score =  163 bits (82), Expect = 8e-37
 Identities = 190/226 (84%)
 Strand = Plus / Plus

                                                                       
Query: 353 caagtactatgaaaggctgaaagagattcgtgattaccatagaaggaatcaatctgcccg 412
           |||||||||||||||||| |||||||| ||||| || ||| |  |||| | |||||||||
Sbjct: 448 caagtactatgaaaggctcaaagagatccgtgaatatcatcggcggaacccatctgcccg 507

                                                                       
Query: 413 cttcgtcagtgaaagtgatgattatgaggagctactaaaggaggaaccgactattgaatt 472
           ||| || |||  || |||||| ||||| ||||| ||||||||||||||   |||||||||
Sbjct: 508 ctttgttagtacaactgatgactatgaagagcttctaaaggaggaaccagttattgaatt 567

                                                                       
Query: 473 cactggcgaggaagcatttggccggtacttggacttacatgagctctataacgagttcat 532
           ||||||||||||| | |||||||| ||| | ||||| |||||||| ||||| ||||||||
Sbjct: 568 cactggcgaggaaacttttggccgttaccttgacttgcatgagctttataatgagttcat 627

                                                         
Query: 533 aaattcaaagtttggatcactattggaatactcagcatacgttggc 578
           |||||| ||||| ||| ||||  ||||||| ||||| || ||||||
Sbjct: 628 aaattccaagttcggaacactgatggaatattcagcttatgttggc 673



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  176 bits (89), Expect = 5e-41
 Identities = 152/173 (87%)
 Strand = Plus / Minus

                                                                            
Query: 93       atggcgtcgtctgtgctggaggccacgcgggcggcgcacgaggacctcgagcggttggag 152
                ||||||||| | ||||||||||| |||||||||  |||||||||| | ||| || |||||
Sbjct: 28750488 atggcgtcgacggtgctggaggcgacgcgggcgaagcacgaggacatggagaggctggag 28750429

                                                                            
Query: 153      cgcctggcggtgcgcgagcttcagcgcgaacccgccaacgcgcgcgaccgcctcttccag 212
                || ||||||||||| ||||| ||||| || ||||||||||||||||||||||||| ||||
Sbjct: 28750428 cggctggcggtgcgggagctgcagcgggagcccgccaacgcgcgcgaccgcctctaccag 28750369

                                                                     
Query: 213      tcccaccgcgtccgtcacatgctcgatctcgtcgtctccacttccgacaagct 265
                ||||||||||| || ||||||||||| |||||| ||||||| |||| ||||||
Sbjct: 28750368 tcccaccgcgtgcgccacatgctcgacctcgtcatctccacctccggcaagct 28750316



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 94/109 (86%)
 Strand = Plus / Minus

                                                                            
Query: 481      aggaagcatttggccggtacttggacttacatgagctctataacgagttcataaattcaa 540
                ||||||| |||||||| ||| ||||||| |||||||| || || |||||||||||||| |
Sbjct: 28748444 aggaagcttttggccgatacctggacttgcatgagctttacaatgagttcataaattcca 28748385

                                                                 
Query: 541      agtttggatcactattggaatactcagcatacgttggcacttttgctca 589
                |||||||| | | | |||||||||||||||| |||||||| ||| ||||
Sbjct: 28748384 agtttggaactccaatggaatactcagcatatgttggcaccttttctca 28748336



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                            
Query: 376      agattcgtgattaccatagaaggaatcaatctgcccgcttcgtcagtgaaagtgatgatt 435
                |||| ||||||||||||||  | ||||  |||||||| ||||| |||| || ||||||||
Sbjct: 28749216 agatccgtgattaccataggcgtaatccttctgcccgtttcgttagtgcaactgatgatt 28749157

                                                                
Query: 436      atgaggagctactaaaggaggaaccgactattgaattcactggcgagg 483
                  || ||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 28749156 tcgaagagctactaaaggaggaaccggctattgaattcactggagagg 28749109



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                            
Query: 266      ggtggaaatctatgaagacaaggacggtgctaggaaggatgagatgtccacccatcttac 325
                |||||||||||| || ||||||||   |||||||||||||||||| |||| |||||||| 
Sbjct: 28749836 ggtggaaatctacgaggacaaggataatgctaggaaggatgagatctccaaccatcttag 28749777

                                                                    
Query: 326      cgcgccggtgcaaactgacatcttccccaagtactatgaaaggctgaaagag 377
                  |  | |||||| |||| ||||| || |||| |||||| ||||| ||||||
Sbjct: 28749776 ttccacagtgcaagctgaaatctttccaaagttctatgacaggctcaaagag 28749725



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  176 bits (89), Expect = 5e-41
 Identities = 152/173 (87%)
 Strand = Plus / Minus

                                                                            
Query: 93       atggcgtcgtctgtgctggaggccacgcgggcggcgcacgaggacctcgagcggttggag 152
                ||||||||| | ||||||||||| |||||||||  |||||||||| | ||| || |||||
Sbjct: 28841812 atggcgtcgacggtgctggaggcgacgcgggcgaagcacgaggacatggagaggctggag 28841753

                                                                            
Query: 153      cgcctggcggtgcgcgagcttcagcgcgaacccgccaacgcgcgcgaccgcctcttccag 212
                || ||||||||||| ||||| ||||| || ||||||||||||||||||||||||| ||||
Sbjct: 28841752 cggctggcggtgcgggagctgcagcgggagcccgccaacgcgcgcgaccgcctctaccag 28841693

                                                                     
Query: 213      tcccaccgcgtccgtcacatgctcgatctcgtcgtctccacttccgacaagct 265
                ||||||||||| || ||||||||||| |||||| ||||||| |||| ||||||
Sbjct: 28841692 tcccaccgcgtgcgccacatgctcgacctcgtcatctccacctccggcaagct 28841640



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 94/109 (86%)
 Strand = Plus / Minus

                                                                            
Query: 481      aggaagcatttggccggtacttggacttacatgagctctataacgagttcataaattcaa 540
                ||||||| |||||||| ||| ||||||| |||||||| || || |||||||||||||| |
Sbjct: 28839768 aggaagcttttggccgatacctggacttgcatgagctttacaatgagttcataaattcca 28839709

                                                                 
Query: 541      agtttggatcactattggaatactcagcatacgttggcacttttgctca 589
                |||||||| | | | |||||||||||||||| |||||||| ||| ||||
Sbjct: 28839708 agtttggaactccaatggaatactcagcatatgttggcaccttttctca 28839660



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                            
Query: 376      agattcgtgattaccatagaaggaatcaatctgcccgcttcgtcagtgaaagtgatgatt 435
                |||| ||||||||||||||  | ||||  |||||||| ||||| |||| || ||||||||
Sbjct: 28840540 agatccgtgattaccataggcgtaatccttctgcccgtttcgttagtgcaactgatgatt 28840481

                                                                
Query: 436      atgaggagctactaaaggaggaaccgactattgaattcactggcgagg 483
                  || ||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 28840480 tcgaagagctactaaaggaggaaccggctattgaattcactggagagg 28840433



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                            
Query: 266      ggtggaaatctatgaagacaaggacggtgctaggaaggatgagatgtccacccatcttac 325
                |||||||||||| || ||||||||   |||||||||||||||||| |||| |||||||| 
Sbjct: 28841160 ggtggaaatctacgaggacaaggataatgctaggaaggatgagatctccaaccatcttag 28841101

                                                                    
Query: 326      cgcgccggtgcaaactgacatcttccccaagtactatgaaaggctgaaagag 377
                  |  | |||||| |||| ||||| || |||| |||||| ||||| ||||||
Sbjct: 28841100 ttccacagtgcaagctgaaatctttccaaagttctatgacaggctcaaagag 28841049



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>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete
             sequence
          Length = 147344

 Score =  176 bits (89), Expect = 5e-41
 Identities = 152/173 (87%)
 Strand = Plus / Minus

                                                                         
Query: 93    atggcgtcgtctgtgctggaggccacgcgggcggcgcacgaggacctcgagcggttggag 152
             ||||||||| | ||||||||||| |||||||||  |||||||||| | ||| || |||||
Sbjct: 57469 atggcgtcgacggtgctggaggcgacgcgggcgaagcacgaggacatggagaggctggag 57410

                                                                         
Query: 153   cgcctggcggtgcgcgagcttcagcgcgaacccgccaacgcgcgcgaccgcctcttccag 212
             || ||||||||||| ||||| ||||| || ||||||||||||||||||||||||| ||||
Sbjct: 57409 cggctggcggtgcgggagctgcagcgggagcccgccaacgcgcgcgaccgcctctaccag 57350

                                                                  
Query: 213   tcccaccgcgtccgtcacatgctcgatctcgtcgtctccacttccgacaagct 265
             ||||||||||| || ||||||||||| |||||| ||||||| |||| ||||||
Sbjct: 57349 tcccaccgcgtgcgccacatgctcgacctcgtcatctccacctccggcaagct 57297



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 94/109 (86%)
 Strand = Plus / Minus

                                                                         
Query: 481   aggaagcatttggccggtacttggacttacatgagctctataacgagttcataaattcaa 540
             ||||||| |||||||| ||| ||||||| |||||||| || || |||||||||||||| |
Sbjct: 55425 aggaagcttttggccgatacctggacttgcatgagctttacaatgagttcataaattcca 55366

                                                              
Query: 541   agtttggatcactattggaatactcagcatacgttggcacttttgctca 589
             |||||||| | | | |||||||||||||||| |||||||| ||| ||||
Sbjct: 55365 agtttggaactccaatggaatactcagcatatgttggcaccttttctca 55317



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                         
Query: 376   agattcgtgattaccatagaaggaatcaatctgcccgcttcgtcagtgaaagtgatgatt 435
             |||| ||||||||||||||  | ||||  |||||||| ||||| |||| || ||||||||
Sbjct: 56197 agatccgtgattaccataggcgtaatccttctgcccgtttcgttagtgcaactgatgatt 56138

                                                             
Query: 436   atgaggagctactaaaggaggaaccgactattgaattcactggcgagg 483
               || ||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 56137 tcgaagagctactaaaggaggaaccggctattgaattcactggagagg 56090



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                         
Query: 266   ggtggaaatctatgaagacaaggacggtgctaggaaggatgagatgtccacccatcttac 325
             |||||||||||| || ||||||||   |||||||||||||||||| |||| |||||||| 
Sbjct: 56817 ggtggaaatctacgaggacaaggataatgctaggaaggatgagatctccaaccatcttag 56758

                                                                 
Query: 326   cgcgccggtgcaaactgacatcttccccaagtactatgaaaggctgaaagag 377
               |  | |||||| |||| ||||| || |||| |||||| ||||| ||||||
Sbjct: 56757 ttccacagtgcaagctgaaatctttccaaagttctatgacaggctcaaagag 56706



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>gb|BT018484.1| Zea mays clone EL01N0424D05.d mRNA sequence
          Length = 1383

 Score =  117 bits (59), Expect = 4e-23
 Identities = 146/175 (83%)
 Strand = Plus / Plus

                                                                       
Query: 404 atctgcccgcttcgtcagtgaaagtgatgattatgaggagctactaaaggaggaaccgac 463
           |||||||||||| || |||  || |||||| ||||| ||||| ||||||||||||||   
Sbjct: 13  atctgcccgctttgttagtacaactgatgactatgaagagcttctaaaggaggaaccagt 72

                                                                       
Query: 464 tattgaattcactggcgaggaagcatttggccggtacttggacttacatgagctctataa 523
           |||||||||||||||||||||| | |||||||| ||| | ||||| |||||||| |||||
Sbjct: 73  tattgaattcactggcgaggaaacttttggccgttaccttgacttgcatgagctttataa 132

                                                                  
Query: 524 cgagttcataaattcaaagtttggatcactattggaatactcagcatacgttggc 578
            |||||||| ||||| ||| | ||| ||||  ||||||| ||||| || ||||||
Sbjct: 133 tgagttcattaattccaaggtgggaacactgatggaatattcagcttatgttggc 187



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>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
          Length = 405672

 Score =  111 bits (56), Expect = 3e-21
 Identities = 137/164 (83%)
 Strand = Plus / Minus

                                                                          
Query: 90     gccatggcgtcgtctgtgctggaggccacgcgggcggcgcacgaggacctcgagcggttg 149
              |||||||||||  | ||||||||||| ||| ||| ||| || |||||| | ||| || ||
Sbjct: 112523 gccatggcgtcaacggtgctggaggcgacgagggtggcccatgaggacttggagaggctg 112464

                                                                          
Query: 150    gagcgcctggcggtgcgcgagcttcagcgcgaacccgccaacgcgcgcgaccgcctcttc 209
              |||||||| |||| ||||||||| ||  | || ||||  ||| ||||||||||| | || 
Sbjct: 112463 gagcgcctcgcggcgcgcgagctgcaatgggagcccgataacccgcgcgaccgctttttt 112404

                                                          
Query: 210    cagtcccaccgcgtccgtcacatgctcgatctcgtcgtctccac 253
              ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 112403 cagtcccaccgcgtccgccacatgctcgacctcgtcgtctccac 112360



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                          
Query: 504    gacttacatgagctctataacgagttcataaattcaaagtttggatcactattggaatac 563
              ||||| |||||||| |||||||||||||||||||| ||||||||| | ||| ||||||||
Sbjct: 111128 gacttgcatgagctttataacgagttcataaattccaagtttggaacgctaatggaatac 111069

                
Query: 564    tc 565
              ||
Sbjct: 111068 tc 111067



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>ref|XM_481724.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1122

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 232 tgctcgatctcgtcgtctccact 254
           |||||||||||||||||||||||
Sbjct: 572 tgctcgatctcgtcgtctccact 550



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 232      tgctcgatctcgtcgtctccact 254
                |||||||||||||||||||||||
Sbjct: 15009941 tgctcgatctcgtcgtctccact 15009963



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>dbj|AP004706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
           PAC clone:P0683E12
          Length = 165766

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 232 tgctcgatctcgtcgtctccact 254
           |||||||||||||||||||||||
Sbjct: 193 tgctcgatctcgtcgtctccact 215



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>dbj|AP004621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0689D06
          Length = 146551

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 232  tgctcgatctcgtcgtctccact 254
            |||||||||||||||||||||||
Sbjct: 8855 tgctcgatctcgtcgtctccact 8877



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>ref|XM_367392.1| Magnaporthe grisea 70-15 hypothetical protein (MG07317.4) partial
            mRNA
          Length = 2088

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 131  cgaggacctcgagcggttgga 151
            |||||||||||||||||||||
Sbjct: 1236 cgaggacctcgagcggttgga 1256



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>gb|AC124998.10| Mus musculus chromosome 10, clone RP24-350B12, complete sequence
          Length = 185801

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 358    actatgaaaggctgaaagaga 378
              |||||||||||||||||||||
Sbjct: 112782 actatgaaaggctgaaagaga 112802



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>emb|CR713709.2|CNS0GDND Tetraodon nigroviridis full-length cDNA
          Length = 1145

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 528 ttcataaattcaaagtttggatcac 552
           ||||||||| |||||||||||||||
Sbjct: 501 ttcataaatgcaaagtttggatcac 477



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>gb|AC109136.1| Homo sapiens chromosome 16 clone RP11-629D22, complete sequence
          Length = 183080

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 574   ttggcacttttgctcagactg 594
             |||||||||||||||||||||
Sbjct: 83495 ttggcacttttgctcagactg 83515



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>emb|AL772184.3| Tetraodon DNA sequence from clone XX-C0AA012DF08, complete sequence
          Length = 69520

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 528   ttcataaattcaaagtttggatcac 552
             ||||||||| |||||||||||||||
Sbjct: 45773 ttcataaatgcaaagtttggatcac 45749



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>gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's Hospital Oakland
           Research Institute) complete sequence
          Length = 230130

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 333 gtgcaaactgacatcttccc 352
           ||||||||||||||||||||
Sbjct: 606 gtgcaaactgacatcttccc 587



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>gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosome 8, complete sequence
          Length = 151221

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 581   ttttgctcagactgaaaaaa 600
             ||||||||||||||||||||
Sbjct: 67905 ttttgctcagactgaaaaaa 67924



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>gb|AC123826.4| Mus musculus BAC clone RP24-97K3 from chromosome 8, complete sequence
          Length = 188704

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 581   ttttgctcagactgaaaaaa 600
             ||||||||||||||||||||
Sbjct: 11109 ttttgctcagactgaaaaaa 11128



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>emb|Z95397.2|SPBC25H2 S.pombe chromosome II cosmid c25H2
          Length = 38585

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 534   aattcaaagtttggatcact 553
             ||||||||||||||||||||
Sbjct: 18657 aattcaaagtttggatcact 18676



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>emb|Z26255.1|TPNARHPAR T.pantotropha putative narG, H, J, I genes
          Length = 3184

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  cctggcggtgcgcgagcttc 174
            ||||||||||||||||||||
Sbjct: 3113 cctggcggtgcgcgagcttc 3132



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>gb|AE012167.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 75 of
            460 of the complete genome
          Length = 10579

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 182  acccgccaacgcgcgcgacc 201
            ||||||||||||||||||||
Sbjct: 5418 acccgccaacgcgcgcgacc 5437



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>ref|NM_136694.1| Drosophila melanogaster CG15863-RA (CG15863), mRNA
          Length = 399

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 539 aaagtttggatcactattgg 558
           ||||||||||||||||||||
Sbjct: 160 aaagtttggatcactattgg 179



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>dbj|AK146028.1| Mus musculus 14 days pregnant adult female amnion cDNA, RIKEN
            full-length enriched library, clone:I530025B16
            product:Hypothetical SPla and the RYanodine receptor,
            full insert sequence
          Length = 3093

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 581  ttttgctcagactgaaaaaa 600
            ||||||||||||||||||||
Sbjct: 1573 ttttgctcagactgaaaaaa 1592



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>dbj|AK166167.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length
            enriched library, clone:G830002H19 product:Hypothetical
            SPla and the RYanodine receptor, full insert sequence
          Length = 3092

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 581  ttttgctcagactgaaaaaa 600
            ||||||||||||||||||||
Sbjct: 1584 ttttgctcagactgaaaaaa 1603



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>gb|AC007414.6| Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone
             BACR06J01, complete sequence
          Length = 172904

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 539   aaagtttggatcactattgg 558
             ||||||||||||||||||||
Sbjct: 14359 aaagtttggatcactattgg 14340



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>gb|BT023615.1| Drosophila melanogaster IP05962 full insert cDNA
          Length = 550

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 539 aaagtttggatcactattgg 558
           ||||||||||||||||||||
Sbjct: 183 aaagtttggatcactattgg 202



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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 182     acccgccaacgcgcgcgacc 201
               ||||||||||||||||||||
Sbjct: 4211647 acccgccaacgcgcgcgacc 4211628



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>gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone
              BACR01L01, complete sequence
          Length = 160301

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 539    aaagtttggatcactattgg 558
              ||||||||||||||||||||
Sbjct: 125806 aaagtttggatcactattgg 125787



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>gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19 of 73 of the complete
              sequence
          Length = 275390

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 539    aaagtttggatcactattgg 558
              ||||||||||||||||||||
Sbjct: 111652 aaagtttggatcactattgg 111633



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>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    cgagcggttggagcgcctgg 159
              ||||||||||||||||||||
Sbjct: 308687 cgagcggttggagcgcctgg 308668


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,044,026
Number of Sequences: 3902068
Number of extensions: 4044026
Number of successful extensions: 75133
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74891
Number of HSP's gapped (non-prelim): 241
length of query: 603
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 580
effective length of database: 17,143,297,704
effective search space: 9943112668320
effective search space used: 9943112668320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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