ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25n14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 89 7e-18
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 86 7e-17
3APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 52 1e-06
4APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 50 4e-06
5GCAT_AERHY (P10480) Phosphatidylcholine-sterol acyltransferase p... 34 0.33
6UNG_MYCPN (P75536) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG) 31 2.1
7RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 h... 31 2.8
8PDC2_CANAL (O60035) Protein PDC2 30 3.6
9YAAU_ECOLI (P31679) Hypothetical metabolite transport protein yaaU 29 8.0

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 89.4 bits (220), Expect = 7e-18
 Identities = 52/163 (31%), Positives = 83/163 (50%)
 Frame = +2

Query: 74  YLANSLFIFGEFGGNDYNAMLFGNYNTDQASTYAPQIVDTISAGVEKLVAMGATDVVVPG 253
           Y   +L+ F + G ND     F N   ++ +   P +V++ SA V+K+  +GA    +  
Sbjct: 165 YFEKALYTF-DIGQNDLTEG-FLNLTVEEVNATVPDLVNSFSANVKKIYDLGARTFWIHN 222

Query: 254 VLPIGCFPIYLTIYGTSSAADYDSLGCLKKFNDLSTYHNSLLQAKVSTLQAKYKSARIMY 433
             PIGC    LT +     A+ DS GC K +N+++ + N  L+  V+ L+     A  ++
Sbjct: 223 TGPIGCLSFILTYFPW---AEKDSAGCAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFVH 279

Query: 434 ADXYAGVYDMVRSPSKYGFSSVFEACCGSGGGKYNYANSARCG 562
            D Y+  Y +   P K+GF      CCG  GGKYN++ +A CG
Sbjct: 280 VDIYSVKYSLFSEPEKHGFEFPLITCCGY-GGKYNFSVTAPCG 321



to top

>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 85.9 bits (211), Expect = 7e-17
 Identities = 48/162 (29%), Positives = 75/162 (46%)
 Frame = +2

Query: 80  ANSLFIFGEFGGNDYNAMLFGNYNTDQASTYAPQIVDTISAGVEKLVAMGATDVVVPGVL 259
           + +L+ F + G ND  A  F N   +Q  T  P+I+      ++ +   G     +    
Sbjct: 162 SKALYTF-DIGQNDLTAGYFANKTVEQVETEVPEIISQFMNAIKNIYGQGGRYFWIHNTG 220

Query: 260 PIGCFPIYLTIYGTSSAADYDSLGCLKKFNDLSTYHNSLLQAKVSTLQAKYKSARIMYAD 439
           PIGC    +  +  + A+D+DS GC+   N L+   N  L+  V  L++    A I Y D
Sbjct: 221 PIGCLAYVIERF-PNKASDFDSHGCVSPLNHLAQQFNHALKQAVIELRSSLSEAAITYVD 279

Query: 440 XYAGVYDMVRSPSKYGFSSVFEACCGSGGGKYNYANSARCGM 565
            Y+  +++      +GF     +CCG  GGKYNY     CGM
Sbjct: 280 VYSLKHELFVHAQGHGFKGSLVSCCGH-GGKYNYNKGIGCGM 320



to top

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 38/141 (26%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
 Frame = +2

Query: 110 GGNDYNAMLFGN---YNTDQASTYAPQIVDTISAGVEKLVAMGATDVVVPGVLPIGCFPI 280
           G ND     FGN   +  +   ++   + D+ ++ V +L   GA  + V G  PIGC P 
Sbjct: 268 GSNDLIYTYFGNGAQHLKNDVDSFTTMMADSAASFVLQLYGYGARRIGVIGTPPIGCTP- 326

Query: 281 YLTIYGTSSAADYDSLGCLKKFNDLSTYHNSLLQAKVSTLQAKYKSARIMYADXYAGVYD 460
                   S        C +  N  +   NS L   +  L     ++ I+Y D Y+    
Sbjct: 327 --------SQRVKKKKICNEDLNYAAQLFNSKLVIILGQLSKTLPNSTIVYGDIYSIFSK 378

Query: 461 MVRSPSKYGFSSVFEACCGSG 523
           M+ SP  YGF  + + CC  G
Sbjct: 379 MLESPEDYGFEEIKKPCCKIG 399



to top

>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
 Frame = +2

Query: 110 GGNDYNAMLFGNYNT---DQASTYAPQIVDTISAGVEKLVAMGATDVVVPGVLPIGCFPI 280
           G ND     FG+      +   +Y   I D+ ++ V +L   GA  + V G  P+GC P 
Sbjct: 351 GSNDLIITYFGSGAQRLKNDIDSYTTIIADSAASFVLQLYGYGARRIGVIGTPPLGCVP- 409

Query: 281 YLTIYGTSSAADYDSLGCLKKFNDLSTYHNSLLQAKVSTLQAKYKSARIMYADXYAGVYD 460
                   S        C ++ N  S   NS L   +  L     ++  +Y D Y  +  
Sbjct: 410 --------SQRLKKKKICNEELNYASQLFNSKLLLILGQLSKTLPNSTFVYMDIYTIISQ 461

Query: 461 MVRSPSKYGFSSVFEACCGSG 523
           M+ +P+ YGF    + CC +G
Sbjct: 462 MLETPAAYGFEETKKPCCKTG 482



to top

>GCAT_AERHY (P10480) Phosphatidylcholine-sterol acyltransferase precursor (EC|
           2.3.1.43) (Glycerophospholipid-cholesterol
           acyltransferase) (GCAT)
          Length = 335

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 35/136 (25%), Positives = 56/136 (41%)
 Frame = +2

Query: 110 GGNDYNAMLFGNYNTDQASTYAPQIVDTISAGVEKLVAMGATDVVVPGVLPIGCFPIYLT 289
           G NDY A     +NT+Q    A ++ D IS    ++V  GA ++++  +  +G  P    
Sbjct: 131 GANDYLAY---GWNTEQD---AKRVRDAISDAANRMVLNGAKEILLFNLPDLGQNP---- 180

Query: 290 IYGTSSAADYDSLGCLKKFNDLSTYHNSLLQAKVSTLQAKYKSARIMYADXYAGVYDMVR 469
                      S   ++  + +S YHN LL      L A     ++   D      +M+R
Sbjct: 181 --------SARSQKVVEAASHVSAYHNQLLLNLARQL-APTGMVKLFEIDKQFA--EMLR 229

Query: 470 SPSKYGFSSVFEACCG 517
            P  +G S    AC G
Sbjct: 230 DPQNFGLSDQRNACYG 245



to top

>UNG_MYCPN (P75536) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 240

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -2

Query: 120 SFPPNSPKMKSELAR*LLQLLPQTEEVMVWNHWSWKLM 7
           SF  N+PK+   L R +L+L  +  E+   NHW+ +L+
Sbjct: 82  SFASNAPKLPQSLKRMILRLQQEYPELAGQNHWTKQLL 119



to top

>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1|
           (hnRNP A3(A))
          Length = 373

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +2

Query: 101 GEFGGNDYNAMLFGNYNTDQASTYAP 178
           G FGG +YN   FGNY   Q S Y P
Sbjct: 310 GNFGGGNYND--FGNYGGQQQSNYGP 333



to top

>PDC2_CANAL (O60035) Protein PDC2|
          Length = 836

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 22/86 (25%), Positives = 40/86 (46%)
 Frame = +2

Query: 146 YNTDQASTYAPQIVDTISAGVEKLVAMGATDVVVPGVLPIGCFPIYLTIYGTSSAADYDS 325
           YN D++   A + +++IS   +     G     +  +  +G          TS  +D  S
Sbjct: 585 YNNDKSIDAAAEPLESISPDNDSSAIPGLETKALSAISGLGTT-------STSVVSDSPS 637

Query: 326 LGCLKKFNDLSTYHNSLLQAKVSTLQ 403
            G  +K+N++STY N  L+ K+  L+
Sbjct: 638 -GTTQKYNNISTYPNGSLKHKLGVLE 662



to top

>YAAU_ECOLI (P31679) Hypothetical metabolite transport protein yaaU|
          Length = 443

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 167 TYAPQIVDTISAGVEKLVAMGATDVVVPGVLPIGCFP 277
           T+ PQIV  +  GV K  A+G  +VV+     +GC P
Sbjct: 264 TFGPQIVGLLGLGVGKNAALG--NVVISLFFMLGCIP 298


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,479,793
Number of Sequences: 219361
Number of extensions: 798481
Number of successful extensions: 3029
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3022
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top