ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal26c13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NUOL_CAMJE (Q9PMA7) NADH-quinone oxidoreductase chain L (EC 1.6.... 30 2.2
2YDD3_SCHPO (O14206) Hypothetical protein C1B9.03c in chromosome I 28 8.5

>NUOL_CAMJE (Q9PMA7) NADH-quinone oxidoreductase chain L (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain L) (NDH-1, chain L)
          Length = 596

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -2

Query: 152 ISPLYISSIATSFLHHSYSSQLINQLQLLVEKSSIILIC 36
           +SPL + +I   F  HS+   L  +L  +  ++ I++IC
Sbjct: 446 MSPLMVLAIIAGFFEHSFFEYLSTKLVFIDAQNQIVMIC 484



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>YDD3_SCHPO (O14206) Hypothetical protein C1B9.03c in chromosome I|
          Length = 389

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = -1

Query: 174 LTECFRTYLPPIHIKHSNQFSSP*LQLTAN*STSIAGRKEQHYINM*TRGFILSSQP 4
           LT  F+   PPI ++H+N        + +     +  R++  YI++  R FI+S++P
Sbjct: 159 LTTTFQNMFPPISVQHTN--------INSVKRVLLLNRRDDGYIDL--RHFIISTKP 205


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,767,688
Number of Sequences: 219361
Number of extensions: 372312
Number of successful extensions: 712
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 80,573,946
effective HSP length: 46
effective length of database: 70,483,340
effective search space used: 1691600160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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