ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25n11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465375.1| Oryza sativa (japonica cultivar-group), mRNA 468 e-129
2dbj|AK067100.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-129
3dbj|AK062153.1| Oryza sativa (japonica cultivar-group) cDNA clon... 394 e-106
4gb|AY109369.1| Zea mays CL160_-4 mRNA sequence 381 e-102
5gb|AF457959.1| Zea mays clone bms1.pk0005.f3, mRNA sequence 299 5e-78
6gb|BT009241.1| Triticum aestivum clone wlk1.pk0012.c2:fis, full ... 248 1e-62
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
8dbj|AP004856.3| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
9dbj|AP004151.3| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
10ref|NM_121226.3| Arabidopsis thaliana diaminopimelate decarboxyl... 68 3e-08
11gb|AY142042.1| Arabidopsis thaliana At5g11880/F14F18_50 mRNA, co... 68 3e-08
12gb|AY049266.1| Arabidopsis thaliana AT5g11880/F14F18_50 mRNA, co... 68 3e-08
13emb|BX830834.1|CNS0A0QT Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
14gb|AY089210.1| Arabidopsis thaliana clone 96020 mRNA, complete s... 68 3e-08
15ref|NM_112297.2| Arabidopsis thaliana diaminopimelate decarboxyl... 56 1e-04
16gb|AY122998.1| Arabidopsis thaliana putative diaminopimelate dec... 56 1e-04
17gb|AY050823.1| Arabidopsis thaliana putative diaminopimelate dec... 56 1e-04
18gb|AF227913.1|AF227913 Arabidopsis thaliana diaminopimelate deca... 56 1e-04
19emb|BX823734.1|CNS0A5A3 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
20emb|BX826071.1|CNS0A51B Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
21gb|AY088418.1| Arabidopsis thaliana clone 6579 mRNA, complete se... 56 1e-04
22emb|AL163812.1|ATF14F18 Arabidopsis thaliana DNA chromosome 5, B... 50 0.007
23emb|BX826109.1|CNS0A7HH Arabidopsis thaliana Full-length cDNA Co... 46 0.11
24emb|AJ300474.1|AHI300474 Antirrhinum hispanicum ORF1, ORF2, ORF3... 44 0.43
25gb|AC161490.7| Mus musculus chromosome 7, clone RP23-307M23, com... 42 1.7
26gb|AC067720.15| Homo sapiens 3 BAC RP11-141C22 (Roswell Park Can... 42 1.7
27gb|AC024099.23| Homo sapiens 3 BAC RP11-250A4 (Roswell Park Canc... 42 1.7
28gb|AC099694.12| Mus musculus, clone RP23-195D9, complete sequence 42 1.7
29gb|AC109506.21| Mus musculus chromosome 7, clone RP23-344G21, co... 42 1.7
30dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
31dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
32dbj|AB022220.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 1.7
33gb|AC166075.2| Mus musculus BAC clone RP23-143L15 from chromosom... 40 6.8
34gb|AC186561.1| Gasterosteus aculeatus clone VMRC28-125N12, compl... 40 6.8
35gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosom... 40 6.8
36emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 40 6.8
37gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 ma... 40 6.8
38gb|AC151472.2| Mus musculus BAC clone RP23-407N2 from chromosome... 40 6.8
39gb|AC140483.3| Mus musculus BAC clone RP24-145A22 from 1, comple... 40 6.8
40emb|CT009561.24| Mouse DNA sequence from clone RP23-128B6 on chr... 40 6.8
41gb|AC154560.3| Mus musculus BAC clone RP23-400E20 from chromosom... 40 6.8
42gb|AC137555.4| Mus musculus BAC clone RP23-445B17 from 1, comple... 40 6.8 
>ref|XM_465375.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1827

 Score =  468 bits (236), Expect = e-129
 Identities = 434/495 (87%), Gaps = 4/495 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gatcttgttttagctgcagnagggtggagtatttgtaaatatagacagtgaatttgattt 60
            ||||||||||||||||||| || | ||||| |||||||| ||||||||||||||||||||
Sbjct: 583  gatcttgttttagctgcag-agagcggagtgtttgtaaacatagacagtgaatttgattt 641

                                                                        
Query: 61   ggagaatattgtcactgctgcaagaagttgcaggaaagcaagtgcctgttttgctcagna 120
            ||||||||||||||||||||| ||| ||||| || ||| |||| |||||||||||||| |
Sbjct: 642  ggagaatattgtcactgctgcgaga-gttgctgggaagaaagtccctgttttgctcagga 700

                                                                        
Query: 121  attaatccagnatgtggatccgcaggttcatccatatgttgccactggaaacaaaacatc 180
             | || |||| |||||||||| ||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 701  -taaacccag-atgtggatccacaggtccatccttatgttgcgactggaaacaaaacctc 758

                                                                        
Query: 181  caaatttgggattcgcaatgaaaaattgcaatggttcttagactcgattaagtcgtactc 240
            ||||||||| || || ||||| ||| | ||||||||||||||||| || ||||| |||||
Sbjct: 759  caaatttggtatccgtaatgagaaactacaatggttcttagactctatcaagtcatactc 818

                                                                        
Query: 241  aaatgatatcaaactggtgggtgttcattgccatcttggatctaccattacaaaggtcga 300
            ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 819  aaatgatatcacactggtgggtgttcattgtcatctgggatctaccattacaaaggtcga 878

                                                                        
Query: 301  tatatttagagacgctgcaaatcttatggtgaactttgttgatgaaattcgagcgcaagg 360
            |||||||||||| || |||  |||||||||||| | |||||||||||||||||| |||||
Sbjct: 879  tatatttagagatgcggcaggtcttatggtgaattatgttgatgaaattcgagcacaagg 938

                                                                        
Query: 361  ttttgagttggagtacctgaatatcggaggtggcttggggatagactaccaccacacggg 420
            ||||||  |||| || || ||||| || |||||| |||| ||||| || |||||||||| 
Sbjct: 939  ttttgaactggaatatctcaatattggcggtggcctgggcatagattatcaccacacgga 998

                                                                        
Query: 421  tgcagtcttgcctacacctatggatcttatcaacactgtccgggaattggtcctctcacg 480
            |||||||||||||||||||||||| || ||||||||||| || ||||| || || |||||
Sbjct: 999  tgcagtcttgcctacacctatggacctcatcaacactgtgcgagaattagttctgtcacg 1058

                           
Query: 481  ggatcttactctcat 495
             |||||||| |||||
Sbjct: 1059 agatcttacactcat 1073
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>dbj|AK067100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098O07, full
            insert sequence
          Length = 1829

 Score =  468 bits (236), Expect = e-129
 Identities = 434/495 (87%), Gaps = 4/495 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gatcttgttttagctgcagnagggtggagtatttgtaaatatagacagtgaatttgattt 60
            ||||||||||||||||||| || | ||||| |||||||| ||||||||||||||||||||
Sbjct: 585  gatcttgttttagctgcag-agagcggagtgtttgtaaacatagacagtgaatttgattt 643

                                                                        
Query: 61   ggagaatattgtcactgctgcaagaagttgcaggaaagcaagtgcctgttttgctcagna 120
            ||||||||||||||||||||| ||| ||||| || ||| |||| |||||||||||||| |
Sbjct: 644  ggagaatattgtcactgctgcgaga-gttgctgggaagaaagtccctgttttgctcagga 702

                                                                        
Query: 121  attaatccagnatgtggatccgcaggttcatccatatgttgccactggaaacaaaacatc 180
             | || |||| |||||||||| ||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 703  -taaacccag-atgtggatccacaggtccatccttatgttgcgactggaaacaaaacctc 760

                                                                        
Query: 181  caaatttgggattcgcaatgaaaaattgcaatggttcttagactcgattaagtcgtactc 240
            ||||||||| || || ||||| ||| | ||||||||||||||||| || ||||| |||||
Sbjct: 761  caaatttggtatccgtaatgagaaactacaatggttcttagactctatcaagtcatactc 820

                                                                        
Query: 241  aaatgatatcaaactggtgggtgttcattgccatcttggatctaccattacaaaggtcga 300
            ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 821  aaatgatatcacactggtgggtgttcattgtcatctgggatctaccattacaaaggtcga 880

                                                                        
Query: 301  tatatttagagacgctgcaaatcttatggtgaactttgttgatgaaattcgagcgcaagg 360
            |||||||||||| || |||  |||||||||||| | |||||||||||||||||| |||||
Sbjct: 881  tatatttagagatgcggcaggtcttatggtgaattatgttgatgaaattcgagcacaagg 940

                                                                        
Query: 361  ttttgagttggagtacctgaatatcggaggtggcttggggatagactaccaccacacggg 420
            ||||||  |||| || || ||||| || |||||| |||| ||||| || |||||||||| 
Sbjct: 941  ttttgaactggaatatctcaatattggcggtggcctgggcatagattatcaccacacgga 1000

                                                                        
Query: 421  tgcagtcttgcctacacctatggatcttatcaacactgtccgggaattggtcctctcacg 480
            |||||||||||||||||||||||| || ||||||||||| || ||||| || || |||||
Sbjct: 1001 tgcagtcttgcctacacctatggacctcatcaacactgtgcgagaattagttctgtcacg 1060

                           
Query: 481  ggatcttactctcat 495
             |||||||| |||||
Sbjct: 1061 agatcttacactcat 1075
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>dbj|AK062153.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H07, full
           insert sequence
          Length = 1108

 Score =  394 bits (199), Expect = e-106
 Identities = 378/434 (87%), Gaps = 3/434 (0%)
 Strand = Plus / Plus

                                                                       
Query: 62  gagaatattgtcactgctgcaagaagttgcaggaaagcaagtgcctgttttgctcagnaa 121
           |||||||||||||||||||| ||| ||||| || ||| |||| |||||||||||||| | 
Sbjct: 1   gagaatattgtcactgctgcgaga-gttgctgggaagaaagtccctgttttgctcagga- 58

                                                                       
Query: 122 ttaatccagnatgtggatccgcaggttcatccatatgttgccactggaaacaaaacatcc 181
           | || |||| |||||||||| ||||| ||||| |||||||| |||||||||||||| |||
Sbjct: 59  taaacccag-atgtggatccacaggtccatccttatgttgcgactggaaacaaaacctcc 117

                                                                       
Query: 182 aaatttgggattcgcaatgaaaaattgcaatggttcttagactcgattaagtcgtactca 241
           |||||||| || || ||||| ||| | ||||||||||||||||| || ||||| ||||||
Sbjct: 118 aaatttggtatccgtaatgagaaactacaatggttcttagactctatcaagtcatactca 177

                                                                       
Query: 242 aatgatatcaaactggtgggtgttcattgccatcttggatctaccattacaaaggtcgat 301
           |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 178 aatgatatcacactggtgggtgttcattgtcatctgggatctaccattacaaaggtcgat 237

                                                                       
Query: 302 atatttagagacgctgcaaatcttatggtgaactttgttgatgaaattcgagcgcaaggt 361
           ||||||||||| || |||  |||||||||||| | |||||||||||||||||| ||||||
Sbjct: 238 atatttagagatgcggcaggtcttatggtgaattatgttgatgaaattcgagcacaaggt 297

                                                                       
Query: 362 tttgagttggagtacctgaatatcggaggtggcttggggatagactaccaccacacgggt 421
           |||||  |||| || || ||||| || |||||| |||| ||||| || |||||||||| |
Sbjct: 298 tttgaactggaatatctcaatattggcggtggcctgggcatagattatcaccacacggat 357

                                                                       
Query: 422 gcagtcttgcctacacctatggatcttatcaacactgtccgggaattggtcctctcacgg 481
           ||||||||||||||||||||||| || ||||||||||| || ||||| || || ||||| 
Sbjct: 358 gcagtcttgcctacacctatggacctcatcaacactgtgcgagaattagttctgtcacga 417

                         
Query: 482 gatcttactctcat 495
           |||||||| |||||
Sbjct: 418 gatcttacactcat 431
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>gb|AY109369.1| Zea mays CL160_-4 mRNA sequence
          Length = 2737

 Score =  381 bits (192), Expect = e-102
 Identities = 406/475 (85%), Gaps = 3/475 (0%)
 Strand = Plus / Plus

                                                                        
Query: 24   gtggagtatttgtaaatatagacagtgaatttgatttggagaatattgtcactgctgcaa 83
            ||||||||||||||||| | || |||||||||||||| |||||||||||||  |||||||
Sbjct: 610  gtggagtatttgtaaatgtggatagtgaatttgatttagagaatattgtcagagctgcaa 669

                                                                        
Query: 84   gaagttgcaggaaagcaagtgcctgttttgctcagnaattaatccagnatgtggatccgc 143
            || | | | |||||| |||| |||||||| || || ||| ||||||| |||||||||| |
Sbjct: 670  ga-gctactggaaagaaagttcctgttttacttag-aataaatccag-atgtggatccac 726

                                                                        
Query: 144  aggttcatccatatgttgccactggaaacaaaacatccaaatttgggattcgcaatgaaa 203
            |||| ||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| |
Sbjct: 727  aggtacatccatatgttgccacgggaaataaaacatccaaattcgggatccgcaatgaga 786

                                                                        
Query: 204  aattgcaatggttcttagactcgattaagtcgtactcaaatgatatcaaactggtgggtg 263
            |||||||||||       |||| || ||||| ||||| ||||| |||||||| || ||||
Sbjct: 787  aattgcaatggnnnnngaactctatcaagtcatactcgaatgaaatcaaactcgttggtg 846

                                                                        
Query: 264  ttcattgccatcttggatctaccattacaaaggtcgatatatttagagacgctgcaaatc 323
            ||||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||   |
Sbjct: 847  ttcattgccatctgggatctactattacaaaggttgatatattcagagatgctgcagtgc 906

                                                                        
Query: 324  ttatggtgaactttgttgatgaaattcgagcgcaaggttttgagttggagtacctgaata 383
            |||||||||| | ||| |||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 907  ttatggtgaattatgtcgatgaaattcgagcacaaggttttaagttggagtacctgaata 966

                                                                        
Query: 384  tcggaggtggcttggggatagactaccaccacacgggtgcagtcttgcctacacctatgg 443
            | |||||||| ||||| ||||| ||||| || || | ||||||||| |||||||||||||
Sbjct: 967  ttggaggtggtttgggaatagattaccatcataccgatgcagtcttacctacacctatgg 1026

                                                                   
Query: 444  atcttatcaacactgtccgggaattggtcctctcacgggatcttactctcattat 498
            |||| ||||||||||| || ||||| || ||||| |  ||||||||||| |||||
Sbjct: 1027 atctcatcaacactgtgcgagaattagttctctctcaagatcttactcttattat 1081
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>gb|AF457959.1| Zea mays clone bms1.pk0005.f3, mRNA sequence
          Length = 530

 Score =  299 bits (151), Expect = 5e-78
 Identities = 283/327 (86%)
 Strand = Plus / Plus

                                                                       
Query: 172 caaaacatccaaatttgggattcgcaatgaaaaattgcaatggttcttagactcgattaa 231
           ||||||||||||||| ||||| |||||||| |||||||||||||| ||  |||| || ||
Sbjct: 1   caaaacatccaaattcgggatccgcaatgagaaattgcaatggtttttgaactctatcaa 60

                                                                       
Query: 232 gtcgtactcaaatgatatcaaactggtgggtgttcattgccatcttggatctaccattac 291
           ||| ||||| ||||| |||||||| || ||||||||||||||||| |||||||| |||||
Sbjct: 61  gtcatactcgaatgaaatcaaactcgttggtgttcattgccatctgggatctactattac 120

                                                                       
Query: 292 aaaggtcgatatatttagagacgctgcaaatcttatggtgaactttgttgatgaaattcg 351
           |||||| |||||||| ||||| ||||||   ||||||||||| | ||| |||||||||||
Sbjct: 121 aaaggttgatatattcagagatgctgcagtgcttatggtgaattatgtcgatgaaattcg 180

                                                                       
Query: 352 agcgcaaggttttgagttggagtacctgaatatcggaggtggcttggggatagactacca 411
           ||| ||||||||| ||||||||||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 181 agcacaaggttttaagttggagtacctgaatattggaggtggtttgggaatagattacca 240

                                                                       
Query: 412 ccacacgggtgcagtcttgcctacacctatggatcttatcaacactgtccgggaattggt 471
            || || | ||||||||| ||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 241 tcataccgatgcagtcttacctacacctatggatctcatcaacactgtacgagaattagt 300

                                      
Query: 472 cctctcacgggatcttactctcattat 498
            ||||| |  ||||||||||| |||||
Sbjct: 301 tctctctcaagatcttactcttattat 327
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>gb|BT009241.1| Triticum aestivum clone wlk1.pk0012.c2:fis, full insert mRNA
           sequence
          Length = 858

 Score =  248 bits (125), Expect = 1e-62
 Identities = 134/137 (97%)
 Strand = Plus / Plus

                                                                       
Query: 362 tttgagttggagtacctgaatatcggaggtggcttggggatagactaccaccacacgggt 421
           ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 1   tttgagttggagtacctgaatattggaggtggtttggggatagactaccaccacactggt 60

                                                                       
Query: 422 gcagtcttgcctacacctatggatcttatcaacactgtccgggaattggtcctctcacgg 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcagtcttgcctacacctatggatcttatcaacactgtccgggaattggtcctctcacgg 120

                            
Query: 482 gatcttactctcattat 498
           |||||||||||||||||
Sbjct: 121 gatcttactctcattat 137
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  180 bits (91), Expect = 3e-42
 Identities = 139/155 (89%)
 Strand = Plus / Minus

                                                                            
Query: 143      caggttcatccatatgttgccactggaaacaaaacatccaaatttgggattcgcaatgaa 202
                ||||| ||||| |||||||| |||||||||||||| ||||||||||| || || ||||| 
Sbjct: 14229730 caggtccatccttatgttgcgactggaaacaaaacctccaaatttggtatccgtaatgag 14229671

                                                                            
Query: 203      aaattgcaatggttcttagactcgattaagtcgtactcaaatgatatcaaactggtgggt 262
                ||| | ||||||||||||||||| || ||||| |||||||||||||||| ||||||||||
Sbjct: 14229670 aaactacaatggttcttagactctatcaagtcatactcaaatgatatcacactggtgggt 14229611

                                                   
Query: 263      gttcattgccatcttggatctaccattacaaaggt 297
                |||||||| ||||| ||||||||||||||||||||
Sbjct: 14229610 gttcattgtcatctgggatctaccattacaaaggt 14229576



 Score =  163 bits (82), Expect = 7e-37
 Identities = 145/166 (87%)
 Strand = Plus / Minus

                                                                            
Query: 294      aggtcgatatatttagagacgctgcaaatcttatggtgaactttgttgatgaaattcgag 353
                ||||||||||||||||||| || |||  |||||||||||| | |||||||||||||||||
Sbjct: 14225841 aggtcgatatatttagagatgcggcaggtcttatggtgaattatgttgatgaaattcgag 14225782

                                                                            
Query: 354      cgcaaggttttgagttggagtacctgaatatcggaggtggcttggggatagactaccacc 413
                | |||||||||||  |||| || || ||||| || |||||| |||| ||||| || ||||
Sbjct: 14225781 cacaaggttttgaactggaatatctcaatattggcggtggcctgggcatagattatcacc 14225722

                                                              
Query: 414      acacgggtgcagtcttgcctacacctatggatcttatcaacactgt 459
                |||||| |||||||||||||||||||||||| || |||||||||||
Sbjct: 14225721 acacggatgcagtcttgcctacacctatggacctcatcaacactgt 14225676



 Score =  131 bits (66), Expect = 2e-27
 Identities = 107/118 (90%), Gaps = 2/118 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1        gatcttgttttagctgcagnagggtggagtatttgtaaatatagacagtgaatttgattt 60
                ||||||||||||||||||| || | ||||| |||||||| ||||||||||||||||||||
Sbjct: 14230597 gatcttgttttagctgcag-agagcggagtgtttgtaaacatagacagtgaatttgattt 14230539

                                                                          
Query: 61       ggagaatattgtcactgctgcaagaagttgcaggaaagcaagtgcctgttttgctcag 118
                ||||||||||||||||||||| || |||||| || ||| |||| ||||||||||||||
Sbjct: 14230538 ggagaatattgtcactgctgcgag-agttgctgggaagaaagtccctgttttgctcag 14230482
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>dbj|AP004856.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1570_H12
          Length = 129767

 Score =  180 bits (91), Expect = 3e-42
 Identities = 139/155 (89%)
 Strand = Plus / Minus

                                                                          
Query: 143    caggttcatccatatgttgccactggaaacaaaacatccaaatttgggattcgcaatgaa 202
              ||||| ||||| |||||||| |||||||||||||| ||||||||||| || || ||||| 
Sbjct: 129750 caggtccatccttatgttgcgactggaaacaaaacctccaaatttggtatccgtaatgag 129691

                                                                          
Query: 203    aaattgcaatggttcttagactcgattaagtcgtactcaaatgatatcaaactggtgggt 262
              ||| | ||||||||||||||||| || ||||| |||||||||||||||| ||||||||||
Sbjct: 129690 aaactacaatggttcttagactctatcaagtcatactcaaatgatatcacactggtgggt 129631

                                                 
Query: 263    gttcattgccatcttggatctaccattacaaaggt 297
              |||||||| ||||| ||||||||||||||||||||
Sbjct: 129630 gttcattgtcatctgggatctaccattacaaaggt 129596



 Score =  163 bits (82), Expect = 7e-37
 Identities = 145/166 (87%)
 Strand = Plus / Minus

                                                                          
Query: 294    aggtcgatatatttagagacgctgcaaatcttatggtgaactttgttgatgaaattcgag 353
              ||||||||||||||||||| || |||  |||||||||||| | |||||||||||||||||
Sbjct: 125861 aggtcgatatatttagagatgcggcaggtcttatggtgaattatgttgatgaaattcgag 125802

                                                                          
Query: 354    cgcaaggttttgagttggagtacctgaatatcggaggtggcttggggatagactaccacc 413
              | |||||||||||  |||| || || ||||| || |||||| |||| ||||| || ||||
Sbjct: 125801 cacaaggttttgaactggaatatctcaatattggcggtggcctgggcatagattatcacc 125742

                                                            
Query: 414    acacgggtgcagtcttgcctacacctatggatcttatcaacactgt 459
              |||||| |||||||||||||||||||||||| || |||||||||||
Sbjct: 125741 acacggatgcagtcttgcctacacctatggacctcatcaacactgt 125696
to top
>dbj|AP004151.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_E02
          Length = 125860

 Score =  180 bits (91), Expect = 3e-42
 Identities = 139/155 (89%)
 Strand = Plus / Minus

                                                                         
Query: 143   caggttcatccatatgttgccactggaaacaaaacatccaaatttgggattcgcaatgaa 202
             ||||| ||||| |||||||| |||||||||||||| ||||||||||| || || ||||| 
Sbjct: 34880 caggtccatccttatgttgcgactggaaacaaaacctccaaatttggtatccgtaatgag 34821

                                                                         
Query: 203   aaattgcaatggttcttagactcgattaagtcgtactcaaatgatatcaaactggtgggt 262
             ||| | ||||||||||||||||| || ||||| |||||||||||||||| ||||||||||
Sbjct: 34820 aaactacaatggttcttagactctatcaagtcatactcaaatgatatcacactggtgggt 34761

                                                
Query: 263   gttcattgccatcttggatctaccattacaaaggt 297
             |||||||| ||||| ||||||||||||||||||||
Sbjct: 34760 gttcattgtcatctgggatctaccattacaaaggt 34726



 Score =  163 bits (82), Expect = 7e-37
 Identities = 145/166 (87%)
 Strand = Plus / Minus

                                                                         
Query: 294   aggtcgatatatttagagacgctgcaaatcttatggtgaactttgttgatgaaattcgag 353
             ||||||||||||||||||| || |||  |||||||||||| | |||||||||||||||||
Sbjct: 30991 aggtcgatatatttagagatgcggcaggtcttatggtgaattatgttgatgaaattcgag 30932

                                                                         
Query: 354   cgcaaggttttgagttggagtacctgaatatcggaggtggcttggggatagactaccacc 413
             | |||||||||||  |||| || || ||||| || |||||| |||| ||||| || ||||
Sbjct: 30931 cacaaggttttgaactggaatatctcaatattggcggtggcctgggcatagattatcacc 30872

                                                           
Query: 414   acacgggtgcagtcttgcctacacctatggatcttatcaacactgt 459
             |||||| |||||||||||||||||||||||| || |||||||||||
Sbjct: 30871 acacggatgcagtcttgcctacacctatggacctcatcaacactgt 30826



 Score =  131 bits (66), Expect = 2e-27
 Identities = 107/118 (90%), Gaps = 2/118 (1%)
 Strand = Plus / Minus

                                                                         
Query: 1     gatcttgttttagctgcagnagggtggagtatttgtaaatatagacagtgaatttgattt 60
             ||||||||||||||||||| || | ||||| |||||||| ||||||||||||||||||||
Sbjct: 35747 gatcttgttttagctgcag-agagcggagtgtttgtaaacatagacagtgaatttgattt 35689

                                                                       
Query: 61    ggagaatattgtcactgctgcaagaagttgcaggaaagcaagtgcctgttttgctcag 118
             ||||||||||||||||||||| || |||||| || ||| |||| ||||||||||||||
Sbjct: 35688 ggagaatattgtcactgctgcgag-agttgctgggaagaaagtccctgttttgctcag 35632
to top
>ref|NM_121226.3| Arabidopsis thaliana diaminopimelate decarboxylase AT5G11880 mRNA,
           complete cds
          Length = 1698

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 265 tcattgccatcttggatctaccattacaaaggtcgatatatttagagacgctgc 318
           |||||| |||||||| ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 842 tcattgtcatcttggttctaccattacaaaggtggatatattcagagatgctgc 895



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 431  cctacacctatggatcttatcaacac 456
            |||||||| |||||||||||||||||
Sbjct: 1008 cctacacccatggatcttatcaacac 1033
to top
>gb|AY142042.1| Arabidopsis thaliana At5g11880/F14F18_50 mRNA, complete cds
          Length = 1470

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 265 tcattgccatcttggatctaccattacaaaggtcgatatatttagagacgctgc 318
           |||||| |||||||| ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 798 tcattgtcatcttggttctaccattacaaaggtggatatattcagagatgctgc 851



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 431 cctacacctatggatcttatcaacac 456
           |||||||| |||||||||||||||||
Sbjct: 964 cctacacccatggatcttatcaacac 989
to top
>gb|AY049266.1| Arabidopsis thaliana AT5g11880/F14F18_50 mRNA, complete cds
          Length = 1632

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 265 tcattgccatcttggatctaccattacaaaggtcgatatatttagagacgctgc 318
           |||||| |||||||| ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 822 tcattgtcatcttggttctaccattacaaaggtggatatattcagagatgctgc 875



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 431  cctacacctatggatcttatcaacac 456
            |||||||| |||||||||||||||||
Sbjct: 988  cctacacccatggatcttatcaacac 1013
to top
>emb|BX830834.1|CNS0A0QT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS2ZC08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1678

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 265 tcattgccatcttggatctaccattacaaaggtcgatatatttagagacgctgc 318
           |||||| |||||||| ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 822 tcattgtcatcttggttctaccattacaaaggtggatatattcagagatgctgc 875



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 431  cctacacctatggatcttatcaacac 456
            |||||||| |||||||||||||||||
Sbjct: 988  cctacacccatggatcttatcaacac 1013
to top
>gb|AY089210.1| Arabidopsis thaliana clone 96020 mRNA, complete sequence
          Length = 1645

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 265 tcattgccatcttggatctaccattacaaaggtcgatatatttagagacgctgc 318
           |||||| |||||||| ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 842 tcattgtcatcttggttctaccattacaaaggtggatatattcagagatgctgc 895



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 431  cctacacctatggatcttatcaacac 456
            |||||||| |||||||||||||||||
Sbjct: 1008 cctacacccatggatcttatcaacac 1033
to top
>ref|NM_112297.2| Arabidopsis thaliana diaminopimelate decarboxylase AT3G14390 mRNA,
           complete cds
          Length = 1980

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 265 tcattgccatcttggatctaccattacaaaggtcgatatatttagaga 312
           |||||||||||| || ||||||||||| ||||| |||||||| |||||
Sbjct: 829 tcattgccatctaggctctaccattactaaggtggatatattcagaga 876



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 132 atgtggatccgcaggttcatccatatgttgccactggaaacaa 174
           |||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 696 atgttgatcctcaggtgcatccatatgttgctactgggaacaa 738
to top
>gb|AY122998.1| Arabidopsis thaliana putative diaminopimelate decarboxylase
           (At3g14390) mRNA, complete cds
          Length = 1486

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 265 tcattgccatcttggatctaccattacaaaggtcgatatatttagaga 312
           |||||||||||| || ||||||||||| ||||| |||||||| |||||
Sbjct: 783 tcattgccatctaggctctaccattactaaggtggatatattcagaga 830



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 132 atgtggatccgcaggttcatccatatgttgccactggaaacaa 174
           |||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 650 atgttgatcctcaggtgcatccatatgttgctactgggaacaa 692
to top
>gb|AY050823.1| Arabidopsis thaliana putative diaminopimelate decarboxylase
           (At3g14390) mRNA, complete cds
          Length = 1612

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 265 tcattgccatcttggatctaccattacaaaggtcgatatatttagaga 312
           |||||||||||| || ||||||||||| ||||| |||||||| |||||
Sbjct: 806 tcattgccatctaggctctaccattactaaggtggatatattcagaga 853



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 132 atgtggatccgcaggttcatccatatgttgccactggaaacaa 174
           |||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 673 atgttgatcctcaggtgcatccatatgttgctactgggaacaa 715
to top
>gb|AF227913.1|AF227913 Arabidopsis thaliana diaminopimelate decarboxylase mRNA, complete
           cds; nuclear gene for chloroplast product
          Length = 1980

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 265 tcattgccatcttggatctaccattacaaaggtcgatatatttagaga 312
           |||||||||||| || ||||||||||| ||||| |||||||| |||||
Sbjct: 829 tcattgccatctaggctctaccattactaaggtggatatattcagaga 876



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 132 atgtggatccgcaggttcatccatatgttgccactggaaacaa 174
           |||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 696 atgttgatcctcaggtgcatccatatgttgctactgggaacaa 738
to top
>emb|BX823734.1|CNS0A5A3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS70ZE02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1592

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 265 tcattgccatcttggatctaccattacaaaggtcgatatatttagaga 312
           |||||||||||| || ||||||||||| ||||| |||||||| |||||
Sbjct: 806 tcattgccatctaggctctaccattactaaggtggatatattcagaga 853



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 132 atgtggatccgcaggttcatccatatgttgccactggaaacaa 174
           |||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 673 atgttgatcctcaggtgcatccatatgttgctactgggaacaa 715
to top
>emb|BX826071.1|CNS0A51B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL83ZB10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1546

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 265 tcattgccatcttggatctaccattacaaaggtcgatatatttagaga 312
           |||||||||||| || ||||||||||| ||||| |||||||| |||||
Sbjct: 809 tcattgccatctaggctctaccattactaaggtggatatattcagaga 856



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 132 atgtggatccgcaggttcatccatatgttgccactggaaacaa 174
           |||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 676 atgttgatcctcaggtgcatccatatgttgctactgggaacaa 718
to top
>gb|AY088418.1| Arabidopsis thaliana clone 6579 mRNA, complete sequence
          Length = 1623

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 265 tcattgccatcttggatctaccattacaaaggtcgatatatttagaga 312
           |||||||||||| || ||||||||||| ||||| |||||||| |||||
Sbjct: 816 tcattgccatctaggctctaccattactaaggtggatatattcagaga 863



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 132 atgtggatccgcaggttcatccatatgttgccactggaaacaa 174
           |||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 683 atgttgatcctcaggtgcatccatatgttgctactgggaacaa 725
to top
>emb|AL163812.1|ATF14F18 Arabidopsis thaliana DNA chromosome 5, BAC clone F14F18 (ESSA project)
          Length = 103638

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 265   tcattgccatcttggatctaccattacaaaggt 297
             |||||| |||||||| |||||||||||||||||
Sbjct: 23488 tcattgtcatcttggttctaccattacaaaggt 23456



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 431   cctacacctatggatcttatcaacac 456
             |||||||| |||||||||||||||||
Sbjct: 23211 cctacacccatggatcttatcaacac 23186
to top
>emb|BX826109.1|CNS0A7HH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL85ZB06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1567

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 132 atgtggatccgcaggttcatccatatgttgccactggaaacaa 174
           |||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 673 atgttgatcctcaggtgcatccatatgttgctactgggaacaa 715
to top
>emb|AJ300474.1|AHI300474 Antirrhinum hispanicum ORF1, ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8,
             s2-RNase gene, ORF9 and slf-S2 gene
          Length = 63687

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 37    aaatatagacagtgaatttgat 58
             ||||||||||||||||||||||
Sbjct: 14151 aaatatagacagtgaatttgat 14172
to top
>gb|AC161490.7| Mus musculus chromosome 7, clone RP23-307M23, complete sequence
          Length = 169596

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 28     agtatttgtaaatatagacag 48
              |||||||||||||||||||||
Sbjct: 167547 agtatttgtaaatatagacag 167567
to top
>gb|AC067720.15| Homo sapiens 3 BAC RP11-141C22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 47037

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 171   acaaaacatccaaatttggga 191
             |||||||||||||||||||||
Sbjct: 15716 acaaaacatccaaatttggga 15736
to top
>gb|AC024099.23| Homo sapiens 3 BAC RP11-250A4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 47059

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 171   acaaaacatccaaatttggga 191
             |||||||||||||||||||||
Sbjct: 31346 acaaaacatccaaatttggga 31326
to top
>gb|AC099694.12| Mus musculus, clone RP23-195D9, complete sequence
          Length = 191204

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 159    ttgccactggaaacaaaacat 179
              |||||||||||||||||||||
Sbjct: 121201 ttgccactggaaacaaaacat 121221
to top
>gb|AC109506.21| Mus musculus chromosome 7, clone RP23-344G21, complete sequence
          Length = 227676

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    agtatttgtaaatatagacag 48
             |||||||||||||||||||||
Sbjct: 18611 agtatttgtaaatatagacag 18631
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 274     tcttggatctaccattacaaa 294
               |||||||||||||||||||||
Sbjct: 2147460 tcttggatctaccattacaaa 2147480
to top
>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_D01
          Length = 97862

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 274   tcttggatctaccattacaaa 294
             |||||||||||||||||||||
Sbjct: 25722 tcttggatctaccattacaaa 25742
to top
>dbj|AB022220.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLN21
          Length = 83906

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 265   tcattgccatcttggatctaccattacaaaggt 297
             |||||||||||| || ||||||||||| |||||
Sbjct: 71883 tcattgccatctaggctctaccattactaaggt 71915



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 143   caggttcatccatatgttgccactggaaacaa 174
             ||||| |||||||||||||| ||||| |||||
Sbjct: 71761 caggtgcatccatatgttgctactgggaacaa 71792
to top
>gb|AC166075.2| Mus musculus BAC clone RP23-143L15 from chromosome 1, complete sequence
          Length = 212447

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    caaatgatatcaaactggtg 259
              ||||||||||||||||||||
Sbjct: 180185 caaatgatatcaaactggtg 180204
to top
>gb|AC186561.1| Gasterosteus aculeatus clone VMRC28-125N12, complete sequence
          Length = 147166

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    ttgatttggagaatattgtc 73
             ||||||||||||||||||||
Sbjct: 76987 ttgatttggagaatattgtc 76968
to top
>gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosome 1, complete sequence
          Length = 221754

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 28     agtatttgtaaatatagacagtga 51
              |||||||||||||||| |||||||
Sbjct: 177296 agtatttgtaaatatatacagtga 177319
to top
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 62      gagaatattgtcactgctgc 81
               ||||||||||||||||||||
Sbjct: 4432643 gagaatattgtcactgctgc 4432624
to top
>gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 map B68, complete
             sequence
          Length = 87080

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   gtactcaaatgatatcaaac 254
             ||||||||||||||||||||
Sbjct: 51173 gtactcaaatgatatcaaac 51154
to top
>gb|AC151472.2| Mus musculus BAC clone RP23-407N2 from chromosome 7, complete sequence
          Length = 196583

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   gaggtggcttggggatagac 406
             ||||||||||||||||||||
Sbjct: 82815 gaggtggcttggggatagac 82834
to top
>gb|AC140483.3| Mus musculus BAC clone RP24-145A22 from 1, complete sequence
          Length = 176649

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    agtatttgtaaatatagacagtga 51
             |||||||||||||||| |||||||
Sbjct: 97859 agtatttgtaaatatatacagtga 97836
to top
>emb|CT009561.24| Mouse DNA sequence from clone RP23-128B6 on chromosome 16, complete
              sequence
          Length = 141692

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 253    actggtgggtgttcattgccatct 276
              |||||||||||| |||||||||||
Sbjct: 112607 actggtgggtgtacattgccatct 112630
to top
>gb|AC154560.3| Mus musculus BAC clone RP23-400E20 from chromosome 17, complete sequence
          Length = 197657

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 325    tatggtgaactttgttgatgaaattcga 352
              |||||||| ||||| |||||||||||||
Sbjct: 162801 tatggtgagctttgctgatgaaattcga 162774
to top
>gb|AC137555.4| Mus musculus BAC clone RP23-445B17 from 1, complete sequence
          Length = 174607

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   caaatgatatcaaactggtg 259
             ||||||||||||||||||||
Sbjct: 50610 caaatgatatcaaactggtg 50629


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,232,662
Number of Sequences: 3902068
Number of extensions: 4232662
Number of successful extensions: 81947
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81781
Number of HSP's gapped (non-prelim): 153
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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