ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal25m13 |
|---|---|
| Clone Library Name | barley_pub |
>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163| Length = 1693 Score = 32.7 bits (73), Expect = 0.44 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +1 Query: 34 RYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCE 141 ++L+++G D+ IWNF TL +G A VR+ E Sbjct: 1109 QFLVTSGQDNTARIWNFAGEQLTLCQGHADWVRNAE 1144
>BCN1_ARATH (Q9M367) Beclin-1-like protein| Length = 443 Score = 32.3 bits (72), Expect = 0.57 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = -3 Query: 435 ARRXYHHVPGSRYRRQTVG*PGAIYG-LRRGSEFLLWPRHRPPHAVGEEPCPRGTA 271 A + ++ P S + ++ ++ G R + F++ PRH+PP + G P PRG + Sbjct: 40 AGKFFNDPPPSATQGSSIHGANSVLGSTRMDNSFVVLPRHKPPQSQGIPPRPRGAS 95
>VE2_HPV04 (Q07849) Regulatory protein E2| Length = 402 Score = 32.0 bits (71), Expect = 0.74 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Frame = +2 Query: 62 PMSTYGILTIQATPYRKAKPNRFDRAKCSSPRT*QPRCHGR---GCIGTGMSSRP 217 P ++Y +T QA+P R+ KP + D +SP T R R G G G P Sbjct: 218 PSTSYSEVTEQASPTRRRKPRKSDATSTTSPETEGVRLRRRRREGKSGPGSGETP 272
>TLE2_HUMAN (Q04725) Transducin-like enhancer protein 2 (ESG2)| Length = 743 Score = 31.6 bits (70), Expect = 0.97 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +1 Query: 25 SXGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 144 S GR+ +STG D+ + W ++ Q E+ SV SC++ Sbjct: 681 SCGRWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 720
>TLE2_MOUSE (Q9WVB2) Transducin-like enhancer protein 2| Length = 767 Score = 31.6 bits (70), Expect = 0.97 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +1 Query: 25 SXGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 144 S GR+ +STG D+ + W ++ Q E+ SV SC++ Sbjct: 705 SCGRWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 744
>YM3M_CAEEL (P91343) Hypothetical WD-repeat protein F55F8.5| Length = 439 Score = 31.2 bits (69), Expect = 1.3 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%) Frame = +1 Query: 1 ALSTPSLTSXGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEMFFSKDVTTAVPW 180 A+ S+ S IS +D+N+ IWN D + + S + K+ T VP Sbjct: 213 AVECVSVNSDSTRAISGSVDTNLKIWNLDASDEATTYEKEEEEESAKKRRKKETKTKVPM 272 Query: 181 P--GVHRDR 201 G HRD+ Sbjct: 273 VTIGGHRDK 281
>WD42_DICDI (P54686) WD-repeat protein 2| Length = 597 Score = 30.8 bits (68), Expect = 1.7 Identities = 9/25 (36%), Positives = 18/25 (72%) Frame = +1 Query: 22 TSXGRYLISTGMDSNVYIWNFDNPS 96 ++ +++ S +DS +YIWN +NP+ Sbjct: 532 SNDSKFVASASLDSQIYIWNVENPT 556
>ERCC8_HUMAN (Q13216) DNA excision repair protein ERCC-8 (Cockayne syndrome WD| repeat protein CSA) Length = 396 Score = 30.8 bits (68), Expect = 1.7 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +1 Query: 22 TSXGRYLISTGMDSNVYIWNFDNPSNTL 105 TS G +L++ G D+ + +WN N NTL Sbjct: 254 TSDGLHLLTVGTDNRMRLWNSSNGENTL 281
>ERCC8_BOVIN (Q5BIM8) DNA excision repair protein ERCC-8| Length = 397 Score = 30.8 bits (68), Expect = 1.7 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +1 Query: 22 TSXGRYLISTGMDSNVYIWNFDNPSNTL 105 TS G +L++ G D+ + +WN N NTL Sbjct: 254 TSDGLHLLTVGTDNRMRLWNSSNGENTL 281
>L2DTL_DROME (Q24371) Protein lethal(2)denticleless (Protein DTL83)| Length = 769 Score = 30.8 bits (68), Expect = 1.7 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +1 Query: 19 LTSXGRYLISTGMDSNVYIWNFDNPSNTL 105 L+ G+YL+S D YIWN D+ L Sbjct: 329 LSPDGKYLLSGSSDERAYIWNLDHAEEPL 357
>ICP4_GAHVG (Q02362) Trans-acting transcriptional activator protein ICP4| (Immediate-early protein IE175) Length = 1415 Score = 30.8 bits (68), Expect = 1.7 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 5/65 (7%) Frame = +3 Query: 153 QGRDNRGAMAGGASGQACQAVPPDREI---CQHAGFTP--SWRRKPFPWDMVLRRRHEGV 317 +GR +R A G PP + C + F + R P PW VLR E + Sbjct: 949 RGRQDRAAFRQFPVGTVIGQTPPQSVLNAYCPNGAFVELVEFARIPEPWQEVLRYSPEAM 1008 Query: 318 CDVAR 332 D+AR Sbjct: 1009 ADIAR 1013
>UNC37_CAEEL (O02482) Transcription factor unc-37 (Uncoordinated protein 37)| Length = 612 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +1 Query: 31 GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEMFF 150 G++ ISTG D+ + W ++ Q E SV SC++ F Sbjct: 552 GKFFISTGKDNALNAWRTPYGASLFQLKENSSVLSCDISF 591
>TLE1_XENLA (O42469) Enhancer of split groucho-like protein 1| Length = 767 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +1 Query: 25 SXGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 144 S G++ +STG D+ + W ++ Q E+ SV SC++ Sbjct: 705 SCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDV 744
>TAF5_DROME (P49846) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 85 kDa subunit) (p85) (TAFII-80) Length = 704 Score = 30.0 bits (66), Expect = 2.8 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = +1 Query: 1 ALSTPSLTSXGRYLISTGMDSNVYIWNFDNPS 96 ++S+ + ++ GRYL S +D N+ IW+ N S Sbjct: 578 SVSSLAFSACGRYLASGSVDHNIIIWDLSNGS 609
>TLE2_BRARE (O13166) Groucho 2 protein| Length = 761 Score = 30.0 bits (66), Expect = 2.8 Identities = 12/38 (31%), Positives = 23/38 (60%) Frame = +1 Query: 31 GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 144 G++ +STG D+ + W+ ++ Q E+ SV SC++ Sbjct: 701 GKWFVSTGKDNLLNAWSTPYGASIFQSKESSSVLSCDI 738
>UCP4_HUMAN (O95847) Mitochondrial uncoupling protein 4 (UCP 4) (Solute carrier| family 25 member 27) Length = 323 Score = 30.0 bits (66), Expect = 2.8 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%) Frame = +3 Query: 132 IVRNVLLQGRDNRGAMAGGASGQAC--QAVPPDREICQHAGFTPSWRRKPFPWDMVLRRR 305 I ++ Q RD +G S C QAV + + + GF PSW R PW MV Sbjct: 252 IKSRIMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFMSLYKGFLPSWLRMT-PWSMVFWLT 310 Query: 306 HEGVCDVA 329 +E + +++ Sbjct: 311 YEKIREMS 318
>TLE3_MOUSE (Q08122) Transducin-like enhancer protein 3 (ESG) (Grg-3)| Length = 771 Score = 29.6 bits (65), Expect = 3.7 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +1 Query: 31 GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 144 G++ +STG D+ + W ++ Q E+ SV SC++ Sbjct: 711 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 748
>TLE2_XENLA (O42478) Enhancer of split groucho-like protein 2 (Fragment)| Length = 198 Score = 29.6 bits (65), Expect = 3.7 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +1 Query: 31 GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 144 G++ +STG D+ + W ++ Q E+ SV SC++ Sbjct: 138 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 175
>TLE1_MOUSE (Q62440) Transducin-like enhancer protein 1 (Groucho-related| protein 1) (Grg-1) Length = 770 Score = 29.6 bits (65), Expect = 3.7 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +1 Query: 31 GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 144 G++ +STG D+ + W ++ Q E+ SV SC++ Sbjct: 710 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 747
>TLE1_HUMAN (Q04724) Transducin-like enhancer protein 1 (ESG1) (E(Sp1) homolog)| Length = 770 Score = 29.6 bits (65), Expect = 3.7 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +1 Query: 31 GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 144 G++ +STG D+ + W ++ Q E+ SV SC++ Sbjct: 710 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 747
>TLE3_HUMAN (Q04726) Transducin-like enhancer protein 3 (ESG3)| Length = 772 Score = 29.6 bits (65), Expect = 3.7 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +1 Query: 31 GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 144 G++ +STG D+ + W ++ Q E+ SV SC++ Sbjct: 712 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 749
>TLE1_BRARE (O13168) Groucho 1 protein (Fragment)| Length = 535 Score = 29.6 bits (65), Expect = 3.7 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +1 Query: 31 GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 144 G++ +STG D+ + W ++ Q E+ SV SC++ Sbjct: 475 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 512
>SYM_AERPE (Q9YCY3) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 572 Score = 29.6 bits (65), Expect = 3.7 Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 7/95 (7%) Frame = +3 Query: 105 TERRSQIGSIVRNVLLQGRDNRGAMAGGASGQACQAVPPDREICQHAGFTPSWRRKPFPW 284 TE IG+ V VL R +A P ++ +H GF RR W Sbjct: 384 TELNDDIGNFVNRVLSLVRSRMSGVA-----------PEPEDLGEHQGFVERVRRAA--W 430 Query: 285 DMV-------LRRRHEGVCDVARGETHFLGEARKW 368 + ++R EG+ ++AR +L + W Sbjct: 431 AVAEDLEAIRIKRATEGILEIAREGNAYLNRTQPW 465
>TLE3_RAT (Q9JIT3) Transducin-like enhancer protein 3 (rTLE3)| Length = 764 Score = 29.6 bits (65), Expect = 3.7 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +1 Query: 31 GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 144 G++ +STG D+ + W ++ Q E+ SV SC++ Sbjct: 704 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 741
>TLE4_MOUSE (Q62441) Transducin-like enhancer protein 4 (Groucho-related| protein 4) (Grg-4) Length = 766 Score = 29.6 bits (65), Expect = 3.7 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +1 Query: 31 GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 144 G++ +STG D+ + W ++ Q E+ SV SC++ Sbjct: 706 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 743
>TLE4_HUMAN (Q04727) Transducin-like enhancer protein 4| Length = 766 Score = 29.6 bits (65), Expect = 3.7 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +1 Query: 31 GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 144 G++ +STG D+ + W ++ Q E+ SV SC++ Sbjct: 706 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 743
>GROU_DROME (P16371) Protein groucho (Enhancer of split m9/10 protein)| (E(spl)m9/10) Length = 719 Score = 29.3 bits (64), Expect = 4.8 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = +1 Query: 31 GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 144 G++ +STG D+ + W ++ Q E SV SC++ Sbjct: 659 GKWFVSTGKDNLLNAWRTPYGASIFQSKETSSVLSCDI 696
>KCNQ4_MOUSE (Q9JK97) Potassium voltage-gated channel subfamily KQT member 4| (Voltage-gated potassium channel subunit Kv7.4) (Potassium channel alpha subunit KvLQT4) (KQT-like 4) (Fragment) Length = 276 Score = 29.3 bits (64), Expect = 4.8 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = -1 Query: 452 RITPPWLAVXITMFQAA-DIADRQSASRGPFTGFAEEVSFSSGHVTDPLMPSAKNHVPGE 276 ++ W T F+A+ + R SA GP AEE S+ D +MP+ K + Sbjct: 75 KVQKSWSFNDRTRFRASLRLKPRSSAEEGPSEEVAEEKSYQCELTVDDVMPAVKTVIRSV 134 Query: 275 RL 270 R+ Sbjct: 135 RI 136
>PCX1_MOUSE (Q9QYC1) Pecanex-like protein 1 (Pecanex homolog) (Fragment)| Length = 1460 Score = 29.3 bits (64), Expect = 4.8 Identities = 13/43 (30%), Positives = 24/43 (55%) Frame = +2 Query: 179 GRGCIGTGMSSRPA*PRNLPACRLYTVMEEKAVPLGHGSSPTA 307 G GC+ G+ S + +++PAC+ +T++ G GS+ A Sbjct: 1301 GMGCVQHGLPSSSSSSQSIPACKHHTLVAFLGAEGGQGSATEA 1343
>SYK3_BUCBP (Q89A27) Putative lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA| ligase) (LysRS) (GX) Length = 322 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = +3 Query: 294 LRRRHEGVCDVARGETHFLGEARKWPPASRLSVG 395 ++RRH+G+C V + +R PP S +++G Sbjct: 264 IQRRHKGICSVEVDQFFLKSLSRGLPPCSGIAIG 297
>WDR57_PONPY (Q5RF51) WD-repeat protein 57| Length = 357 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +1 Query: 16 SLTSXGRYLISTGMDSNVYIWN 81 SL+S G YL+S MD+ V +W+ Sbjct: 242 SLSSEGSYLLSNAMDNTVRVWD 263
>WDR57_HUMAN (Q96DI7) WD-repeat protein 57 (Prp8-binding protein) (hPRP8BP) (U5| snRNP-specific 40 kDa protein) (38 kDa splicing factor) Length = 357 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +1 Query: 16 SLTSXGRYLISTGMDSNVYIWN 81 SL+S G YL+S MD+ V +W+ Sbjct: 242 SLSSEGSYLLSNAMDNTVRVWD 263
>WDR57_MOUSE (Q6PE01) WD-repeat protein 57| Length = 358 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +1 Query: 16 SLTSXGRYLISTGMDSNVYIWN 81 SL+S G YL+S MD+ V +W+ Sbjct: 243 SLSSEGSYLLSNAMDNTVRVWD 264
>ZCH14_MOUSE (Q8VIG0) Zinc finger CCHC domain-containing protein 14 (BDG-29)| Length = 956 Score = 28.5 bits (62), Expect = 8.2 Identities = 18/42 (42%), Positives = 24/42 (57%) Frame = -1 Query: 392 DRQSASRGPFTGFAEEVSFSSGHVTDPLMPSAKNHVPGERLS 267 + ++ GP +G + SF G V DPL PSA H PG+ LS Sbjct: 544 EERNKGPGPRSGTKVDKSFG-GAVLDPL-PSAAPHPPGQGLS 583
>HOMEZ_MOUSE (Q80W88) Homeobox and leucine zipper protein Homez (Homeodomain| leucine zipper-containing factor) Length = 518 Score = 28.5 bits (62), Expect = 8.2 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = +1 Query: 256 RHGGESRSPGTWFFADGMRGSVTWPEEKL 342 RHG + TWF A +R ++W E++ Sbjct: 67 RHGLQMEKVKTWFMAQRLRCGISWSSEEI 95
>ERCC8_MOUSE (Q8CFD5) DNA excision repair protein ERCC-8 (Cockayne syndrome WD| repeat protein CSA homolog) Length = 397 Score = 28.5 bits (62), Expect = 8.2 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 Query: 22 TSXGRYLISTGMDSNVYIWNFDNPSNTL 105 TS G +L++ G D+ + +WN + NTL Sbjct: 254 TSDGLHLLTIGTDNRMRLWNSSSGDNTL 281
>HOMEZ_RAT (Q8K3E9) Homeobox and leucine zipper protein Homez (Homeodomain| leucine zipper-containing factor) Length = 513 Score = 28.5 bits (62), Expect = 8.2 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = +1 Query: 256 RHGGESRSPGTWFFADGMRGSVTWPEEKL 342 RHG + TWF A +R ++W E++ Sbjct: 67 RHGLQMEKVKTWFMAQRLRCGISWSSEEI 95
>Y1919_AGRT5 (P58770) UPF0190 protein Atu1919/AGR_C_3511| Length = 313 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Frame = -3 Query: 327 PRHRPPHAVGEEPCPRGTAFSSMTV*SRHAG-RFLGQAGRLDMPVPMHPRPWHRGCHVLG 151 P +RPPH E P+ S AG +G AGR + P+ +P G + L Sbjct: 2 PAYRPPHIASSEITPKSFYLSRRNFLGTAAGLAAIGLAGREAIAAPLSAKP---GAYKLD 58 Query: 150 EE 145 E+ Sbjct: 59 EK 60 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.129 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,642,286 Number of Sequences: 219361 Number of extensions: 1925550 Number of successful extensions: 5502 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 5242 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5499 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
