>KAPP_ARATH (P46014) Kinase-associated protein phosphatase (EC 3.1.3.16)|
          Length = 581

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 33/56 (58%), Positives = 41/56 (73%)
 Frame = +1

Query: 208 SHLTLEVIAGPSHGINRYLQSGNTSMLPMTLGRIPQSDLVFKDSEVSGKHARIDWN 375
           S L LEVIAGP+ G+   + S ++S LP+ LGR+  SDL  KDSEVSGKHA+I WN
Sbjct: 180 SWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLALKDSEVSGKHAQITWN 235

>RL2_TOBAC (P25998) 60S ribosomal protein L2|
          Length = 260

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +1

Query: 109 NVLSLAGCPSGPYVANIIHAYAHDI*SFARSAGSHLTLEVIAGPSHGINRY-LQSGNTSM 285
           NVL L   P G  V N+ H    D   FAR +G++  + +   P +G  R  L SG+  +
Sbjct: 100 NVLPLRSIPEGAVVCNVEHKVG-DRGVFARCSGAY-AIVISHNPDNGTTRIKLPSGSKKI 157

Query: 286 LP 291
           +P
Sbjct: 158 VP 159

>RIMM_RALSO (Q8Y0V9) Probable 16S rRNA-processing protein rimM|
          Length = 184

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 217 TLEVIAG----PSHGINRYLQSGNTSMLPMTLGRIPQSDLVFKDSEVSGKHARIDW 372
           TL  +AG     +H I R +  G T  L      +P  ++  K  +V+GKH  +DW
Sbjct: 131 TLGTVAGLIDNGAHQILRIVDEGGTERL------VPFVEVYVKSVDVAGKHIVVDW 180


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,371,015
Number of Sequences: 219361
Number of extensions: 1560356
Number of successful extensions: 3128
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3097
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)