ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25m06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 434 e-118
2dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic D... 434 e-118
3dbj|AK120061.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
4dbj|AK061846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
5dbj|AK099025.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 1e-81
6dbj|AK070714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 1e-81
7gb|AY104446.1| Zea mays PCO085677 mRNA sequence 232 9e-58
8gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 46 0.12
9emb|AL845317.7| Mouse DNA sequence from clone RP23-222K9 on chro... 46 0.12
10gb|AC124439.4| Mus musculus BAC clone RP24-261N14 from chromosom... 40 7.2
11gb|AC125071.3| Mus musculus BAC clone RP23-453O8 from chromosome... 40 7.2
12gb|AY308745.1| Mus musculus cordon-bleu (cobl) mRNA, complete cds 40 7.2
13emb|AL592153.6| Human DNA sequence from clone RP11-58K1 on chrom... 40 7.2
14emb|AL160053.15| Human DNA sequence from clone RP11-536D16 on ch... 40 7.2
15emb|AL713914.10| Mouse DNA sequence from clone RP24-293E17 on ch... 40 7.2
16emb|AL844607.4| Mouse DNA sequence from clone RP24-280G18 on chr... 40 7.2
17gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.2
18dbj|AK147366.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 7.2
19dbj|AK147633.1| Mus musculus adult male brain UNDEFINED_CELL_LIN... 40 7.2
20dbj|AK049730.1| Mus musculus 12 days embryo spinal cord cDNA, RI... 40 7.2
21ref|NM_172496.2| Mus musculus cordon-bleu (Cobl), mRNA 40 7.2
22gb|AC159649.3| Mus musculus BAC clone RP23-46D6 from chromosome ... 40 7.2
23dbj|AK122334.1| Mus musculus mRNA for mKIAA0633 protein 40 7.2
24emb|Z75742.1|HSLUCA10 Human DNA sequence from clone XXcos-10 on ... 40 7.2
25gb|U26967.1|COBL Mus musculus cordon-bleu mRNA, partial cds 40 7.2

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  434 bits (219), Expect = e-118
 Identities = 460/539 (85%), Gaps = 21/539 (3%)
 Strand = Plus / Plus

                                                                          
Query: 4      ctcagtctggtggctatggtccgcaacatcaccaccctcagggtcatggcccagcttctc 63
              |||| |||||||| ||||||| |||| |  ||| |||||||||||||||  |||||||||
Sbjct: 570550 ctcaatctggtggatatggtcagcaaaactaccgccctcagggtcatggtgcagcttctc 570609

                                                                          
Query: 64     agtgggggcctcgttctcaaccacagcag---tatggatatccaccaagagggcctcc-- 118
              ||||||| || ||||||||||| ||||     ||||||||||||||||||||||||||  
Sbjct: 570610 agtggggcccacgttctcaaccccagcctggatatggatatccaccaagagggcctccac 570669

                                                                          
Query: 119    -tcagaacgcgccatactcccaacccccttatggtggttacccacagcagccaccaccaa 177
               |||||||  |||||||||||||||   ||||||||| ||||| ||||||||||||||||
Sbjct: 570670 ctcagaacatgccatactcccaacc---ttatggtggctacccgcagcagccaccaccaa 570726

                                                                          
Query: 178    gaggtggcatgggctgggaccagaggcaaggccctccgcctca---------ccagggtg 228
              ||||||||||||||||||| |||||||| |||||||| || ||         ||| ||||
Sbjct: 570727 gaggtggcatgggctgggatcagaggcagggccctccaccccatgcttcccaccatggtg 570786

                                                                          
Query: 229    gtggttatgactactacaaacagggatctcaaccatacgaaagccagccaccaaactacc 288
              | ||||| |||||||| |||||||| ||||||||||| ||| ||||||||||||| ||||
Sbjct: 570787 gcggttacgactactataaacagggttctcaaccatatgaaggccagccaccaaattacc 570846

                                                                          
Query: 289    cccctgggccagggaactacaacagctatggcccatcacaagctccaagctatggacagc 348
              | |||||||| || |||||||| || ||||| |||||||| |  ||||  |||||||| |
Sbjct: 570847 ctcctgggcctggaaactacaatagttatgggccatcacagggcccaaattatggacaac 570906

                                                                          
Query: 349    ctcagtatccgcagtctgcacctccacagaactatggtcctggatatggtgatcctaggt 408
              ||||||||||||||||||||||||||||||||||||| || || |||||||||||||| |
Sbjct: 570907 ctcagtatccgcagtctgcacctccacagaactatgggccgggttatggtgatcctagat 570966

                                                                          
Query: 409    acagtgctccagcgccagcccagcagtactatgggcagccaccagccggtccgcagcaag 468
              ||| ||||||||| |||  ||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 570967 acaatgctccagcaccaaaccagcagtactatggacagcctccagcgggtccacagcaag 571026

                                                                         
Query: 469    gctaccctcaacagccagatccttatgctaggcctccatatggtggacctggacaatgg 527
              ||||||||| ||||| |||||| || |||||||||   |||||||||||||||||||||
Sbjct: 571027 gctaccctccacagcaagatccctacgctaggcct---tatggtggacctggacaatgg 571082



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>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0007D08
          Length = 183142

 Score =  434 bits (219), Expect = e-118
 Identities = 460/539 (85%), Gaps = 21/539 (3%)
 Strand = Plus / Plus

                                                                          
Query: 4      ctcagtctggtggctatggtccgcaacatcaccaccctcagggtcatggcccagcttctc 63
              |||| |||||||| ||||||| |||| |  ||| |||||||||||||||  |||||||||
Sbjct: 160510 ctcaatctggtggatatggtcagcaaaactaccgccctcagggtcatggtgcagcttctc 160569

                                                                          
Query: 64     agtgggggcctcgttctcaaccacagcag---tatggatatccaccaagagggcctcc-- 118
              ||||||| || ||||||||||| ||||     ||||||||||||||||||||||||||  
Sbjct: 160570 agtggggcccacgttctcaaccccagcctggatatggatatccaccaagagggcctccac 160629

                                                                          
Query: 119    -tcagaacgcgccatactcccaacccccttatggtggttacccacagcagccaccaccaa 177
               |||||||  |||||||||||||||   ||||||||| ||||| ||||||||||||||||
Sbjct: 160630 ctcagaacatgccatactcccaacc---ttatggtggctacccgcagcagccaccaccaa 160686

                                                                          
Query: 178    gaggtggcatgggctgggaccagaggcaaggccctccgcctca---------ccagggtg 228
              ||||||||||||||||||| |||||||| |||||||| || ||         ||| ||||
Sbjct: 160687 gaggtggcatgggctgggatcagaggcagggccctccaccccatgcttcccaccatggtg 160746

                                                                          
Query: 229    gtggttatgactactacaaacagggatctcaaccatacgaaagccagccaccaaactacc 288
              | ||||| |||||||| |||||||| ||||||||||| ||| ||||||||||||| ||||
Sbjct: 160747 gcggttacgactactataaacagggttctcaaccatatgaaggccagccaccaaattacc 160806

                                                                          
Query: 289    cccctgggccagggaactacaacagctatggcccatcacaagctccaagctatggacagc 348
              | |||||||| || |||||||| || ||||| |||||||| |  ||||  |||||||| |
Sbjct: 160807 ctcctgggcctggaaactacaatagttatgggccatcacagggcccaaattatggacaac 160866

                                                                          
Query: 349    ctcagtatccgcagtctgcacctccacagaactatggtcctggatatggtgatcctaggt 408
              ||||||||||||||||||||||||||||||||||||| || || |||||||||||||| |
Sbjct: 160867 ctcagtatccgcagtctgcacctccacagaactatgggccgggttatggtgatcctagat 160926

                                                                          
Query: 409    acagtgctccagcgccagcccagcagtactatgggcagccaccagccggtccgcagcaag 468
              ||| ||||||||| |||  ||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 160927 acaatgctccagcaccaaaccagcagtactatggacagcctccagcgggtccacagcaag 160986

                                                                         
Query: 469    gctaccctcaacagccagatccttatgctaggcctccatatggtggacctggacaatgg 527
              ||||||||| ||||| |||||| || |||||||||   |||||||||||||||||||||
Sbjct: 160987 gctaccctccacagcaagatccctacgctaggcct---tatggtggacctggacaatgg 161042



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>dbj|AK120061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I23, full
            insert sequence
          Length = 4843

 Score =  434 bits (219), Expect = e-118
 Identities = 460/539 (85%), Gaps = 21/539 (3%)
 Strand = Plus / Plus

                                                                        
Query: 4    ctcagtctggtggctatggtccgcaacatcaccaccctcagggtcatggcccagcttctc 63
            |||| |||||||| ||||||| |||| |  ||| |||||||||||||||  |||||||||
Sbjct: 3461 ctcaatctggtggatatggtcagcaaaactaccgccctcagggtcatggtgcagcttctc 3520

                                                                        
Query: 64   agtgggggcctcgttctcaaccacagcag---tatggatatccaccaagagggcctcc-- 118
            ||||||| || ||||||||||| ||||     ||||||||||||||||||||||||||  
Sbjct: 3521 agtggggcccacgttctcaaccccagcctggatatggatatccaccaagagggcctccac 3580

                                                                        
Query: 119  -tcagaacgcgccatactcccaacccccttatggtggttacccacagcagccaccaccaa 177
             |||||||  |||||||||||||||   ||||||||| ||||| ||||||||||||||||
Sbjct: 3581 ctcagaacatgccatactcccaacc---ttatggtggctacccgcagcagccaccaccaa 3637

                                                                        
Query: 178  gaggtggcatgggctgggaccagaggcaaggccctccgcctca---------ccagggtg 228
            ||||||||||||||||||| |||||||| |||||||| || ||         ||| ||||
Sbjct: 3638 gaggtggcatgggctgggatcagaggcagggccctccaccccatgcttcccaccatggtg 3697

                                                                        
Query: 229  gtggttatgactactacaaacagggatctcaaccatacgaaagccagccaccaaactacc 288
            | ||||| |||||||| |||||||| ||||||||||| ||| ||||||||||||| ||||
Sbjct: 3698 gcggttacgactactataaacagggttctcaaccatatgaaggccagccaccaaattacc 3757

                                                                        
Query: 289  cccctgggccagggaactacaacagctatggcccatcacaagctccaagctatggacagc 348
            | |||||||| || |||||||| || ||||| |||||||| |  ||||  |||||||| |
Sbjct: 3758 ctcctgggcctggaaactacaatagttatgggccatcacagggcccaaattatggacaac 3817

                                                                        
Query: 349  ctcagtatccgcagtctgcacctccacagaactatggtcctggatatggtgatcctaggt 408
            ||||||||||||||||||||||||||||||||||||| || || |||||||||||||| |
Sbjct: 3818 ctcagtatccgcagtctgcacctccacagaactatgggccgggttatggtgatcctagat 3877

                                                                        
Query: 409  acagtgctccagcgccagcccagcagtactatgggcagccaccagccggtccgcagcaag 468
            ||| ||||||||| |||  ||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 3878 acaatgctccagcaccaaaccagcagtactatggacagcctccagcgggtccacagcaag 3937

                                                                       
Query: 469  gctaccctcaacagccagatccttatgctaggcctccatatggtggacctggacaatgg 527
            ||||||||| ||||| |||||| || |||||||||   |||||||||||||||||||||
Sbjct: 3938 gctaccctccacagcaagatccctacgctaggcct---tatggtggacctggacaatgg 3993



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>dbj|AK061846.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-F02, full
           insert sequence
          Length = 1569

 Score =  434 bits (219), Expect = e-118
 Identities = 460/539 (85%), Gaps = 21/539 (3%)
 Strand = Plus / Plus

                                                                       
Query: 4   ctcagtctggtggctatggtccgcaacatcaccaccctcagggtcatggcccagcttctc 63
           |||| |||||||| ||||||| |||| |  ||| |||||||||||||||  |||||||||
Sbjct: 153 ctcaatctggtggatatggtcagcaaaactaccgccctcagggtcatggtgcagcttctc 212

                                                                       
Query: 64  agtgggggcctcgttctcaaccacagcag---tatggatatccaccaagagggcctcc-- 118
           ||||||| || ||||||||||| ||||     ||||||||||||||||||||||||||  
Sbjct: 213 agtggggcccacgttctcaaccccagcctggatatggatatccaccaagagggcctccac 272

                                                                       
Query: 119 -tcagaacgcgccatactcccaacccccttatggtggttacccacagcagccaccaccaa 177
            |||||||  |||||||||||||||   ||||||||| ||||| ||||||||||||||||
Sbjct: 273 ctcagaacatgccatactcccaacc---ttatggtggctacccgcagcagccaccaccaa 329

                                                                       
Query: 178 gaggtggcatgggctgggaccagaggcaaggccctccgcctca---------ccagggtg 228
           ||||||||||||||||||| |||||||| |||||||| || ||         ||| ||||
Sbjct: 330 gaggtggcatgggctgggatcagaggcagggccctccaccccatgcttcccaccatggtg 389

                                                                       
Query: 229 gtggttatgactactacaaacagggatctcaaccatacgaaagccagccaccaaactacc 288
           | ||||| |||||||| |||||||| ||||||||||| ||| ||||||||||||| ||||
Sbjct: 390 gcggttacgactactataaacagggttctcaaccatatgaaggccagccaccaaattacc 449

                                                                       
Query: 289 cccctgggccagggaactacaacagctatggcccatcacaagctccaagctatggacagc 348
           | |||||||| || |||||||| || ||||| |||||||| |  ||||  |||||||| |
Sbjct: 450 ctcctgggcctggaaactacaatagttatgggccatcacagggcccaaattatggacaac 509

                                                                       
Query: 349 ctcagtatccgcagtctgcacctccacagaactatggtcctggatatggtgatcctaggt 408
           ||||||||||||||||||||||||||||||||||||| || || |||||||||||||| |
Sbjct: 510 ctcagtatccgcagtctgcacctccacagaactatgggccgggttatggtgatcctagat 569

                                                                       
Query: 409 acagtgctccagcgccagcccagcagtactatgggcagccaccagccggtccgcagcaag 468
           ||| ||||||||| |||  ||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 570 acaatgctccagcaccaaaccagcagtactatggacagcctccagcgggtccacagcaag 629

                                                                      
Query: 469 gctaccctcaacagccagatccttatgctaggcctccatatggtggacctggacaatgg 527
           ||||||||| ||||| |||||| || |||||||||   |||||||||||||||||||||
Sbjct: 630 gctaccctccacagcaagatccctacgctaggcct---tatggtggacctggacaatgg 685



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>dbj|AK099025.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124E19, full
            insert sequence
          Length = 3906

 Score =  311 bits (157), Expect = 1e-81
 Identities = 348/411 (84%), Gaps = 18/411 (4%)
 Strand = Plus / Plus

                                                                        
Query: 4    ctcagtctggtggctatggtccgcaacatcaccaccctcagggtcatggcccagcttctc 63
            |||| |||||||| ||||||| |||| |  ||| |||||||||||||||  |||||||||
Sbjct: 3499 ctcaatctggtggatatggtcagcaaaactaccgccctcagggtcatggtgcagcttctc 3558

                                                                        
Query: 64   agtgggggcctcgttctcaaccacagcag---tatggatatccaccaagagggcctcc-- 118
            ||||||| || ||||||||||| ||||     ||||||||||||||||||||||||||  
Sbjct: 3559 agtggggcccacgttctcaaccccagcctggatatggatatccaccaagagggcctccac 3618

                                                                        
Query: 119  -tcagaacgcgccatactcccaacccccttatggtggttacccacagcagccaccaccaa 177
             |||||||  |||||||||||||||   ||||||||| ||||| ||||||||||||||||
Sbjct: 3619 ctcagaacatgccatactcccaacc---ttatggtggctacccgcagcagccaccaccaa 3675

                                                                        
Query: 178  gaggtggcatgggctgggaccagaggcaaggccctccgcctca---------ccagggtg 228
            ||||||||||||||||||| |||||||| |||||||| || ||         ||| ||||
Sbjct: 3676 gaggtggcatgggctgggatcagaggcagggccctccaccccatgcttcccaccatggtg 3735

                                                                        
Query: 229  gtggttatgactactacaaacagggatctcaaccatacgaaagccagccaccaaactacc 288
            | ||||| |||||||| |||||||| ||||||||||| ||| ||||||||||||| ||||
Sbjct: 3736 gcggttacgactactataaacagggttctcaaccatatgaaggccagccaccaaattacc 3795

                                                                        
Query: 289  cccctgggccagggaactacaacagctatggcccatcacaagctccaagctatggacagc 348
            | |||||||| || |||||||| || ||||| |||||||| |  ||||  |||||||| |
Sbjct: 3796 ctcctgggcctggaaactacaatagttatgggccatcacagggcccaaattatggacaac 3855

                                                               
Query: 349  ctcagtatccgcagtctgcacctccacagaactatggtcctggatatggtg 399
            ||||||||||||||||||||||||||||||||||||| || || |||||||
Sbjct: 3856 ctcagtatccgcagtctgcacctccacagaactatgggccgggttatggtg 3906



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>dbj|AK070714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061F15, full
            insert sequence
          Length = 2279

 Score =  311 bits (157), Expect = 1e-81
 Identities = 348/411 (84%), Gaps = 18/411 (4%)
 Strand = Plus / Plus

                                                                        
Query: 4    ctcagtctggtggctatggtccgcaacatcaccaccctcagggtcatggcccagcttctc 63
            |||| |||||||| ||||||| |||| |  ||| |||||||||||||||  |||||||||
Sbjct: 1872 ctcaatctggtggatatggtcagcaaaactaccgccctcagggtcatggtgcagcttctc 1931

                                                                        
Query: 64   agtgggggcctcgttctcaaccacagcag---tatggatatccaccaagagggcctcc-- 118
            ||||||| || ||||||||||| ||||     ||||||||||||||||||||||||||  
Sbjct: 1932 agtggggcccacgttctcaaccccagcctggatatggatatccaccaagagggcctccac 1991

                                                                        
Query: 119  -tcagaacgcgccatactcccaacccccttatggtggttacccacagcagccaccaccaa 177
             |||||||  |||||||||||||||   ||||||||| ||||| ||||||||||||||||
Sbjct: 1992 ctcagaacatgccatactcccaacc---ttatggtggctacccgcagcagccaccaccaa 2048

                                                                        
Query: 178  gaggtggcatgggctgggaccagaggcaaggccctccgcctca---------ccagggtg 228
            ||||||||||||||||||| |||||||| |||||||| || ||         ||| ||||
Sbjct: 2049 gaggtggcatgggctgggatcagaggcagggccctccaccccatgcttcccaccatggtg 2108

                                                                        
Query: 229  gtggttatgactactacaaacagggatctcaaccatacgaaagccagccaccaaactacc 288
            | ||||| |||||||| |||||||| ||||||||||| ||| ||||||||||||| ||||
Sbjct: 2109 gcggttacgactactataaacagggttctcaaccatatgaaggccagccaccaaattacc 2168

                                                                        
Query: 289  cccctgggccagggaactacaacagctatggcccatcacaagctccaagctatggacagc 348
            | |||||||| || |||||||| || ||||| |||||||| |  ||||  |||||||| |
Sbjct: 2169 ctcctgggcctggaaactacaatagttatgggccatcacagggcccaaattatggacaac 2228

                                                               
Query: 349  ctcagtatccgcagtctgcacctccacagaactatggtcctggatatggtg 399
            ||||||||||||||||||||||||||||||||||||| || || |||||||
Sbjct: 2229 ctcagtatccgcagtctgcacctccacagaactatgggccgggttatggtg 2279



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>gb|AY104446.1| Zea mays PCO085677 mRNA sequence
          Length = 1489

 Score =  232 bits (117), Expect = 9e-58
 Identities = 305/369 (82%), Gaps = 9/369 (2%)
 Strand = Plus / Plus

                                                                       
Query: 170 accaccaagaggtggcatgggctgggaccagaggcaaggccctccgcctca--------- 220
           |||||||||||||||||||||||||||||||||||| |||||||| || ||         
Sbjct: 212 accaccaagaggtggcatgggctgggaccagaggcagggccctccaccccatccttcgta 271

                                                                       
Query: 221 ccagggtggtggttatgactactacaaacagggatctcaaccatacgaaagccagccacc 280
           ||||||||||| || ||| |||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 272 ccagggtggtgcttctgattactacaagcagggatctcagccatatgatagccagccacc 331

                                                                       
Query: 281 aaactacccccctgggccagggaactacaacagctatggcccatcacaagctccaagcta 340
            | |||||| |||||||||||||| |||||||| ||||| | |||||| | ||| | |||
Sbjct: 332 gagctaccctcctgggccagggaattacaacagttatggtcaatcacagggtcctaacta 391

                                                                       
Query: 341 tggacagcctcagtatccgcagtctgcacctccacagaactatggtcctggatatggtga 400
           ||| || ||||| || |||||   ||| ||||  ||||||||  | | ||| ||||||||
Sbjct: 392 tggccaacctcaatacccgcaacatgcgcctcagcagaactacagccatgggtatggtga 451

                                                                       
Query: 401 tcctaggtacagtgctccagcgccagcccagcagtactatgggcagccaccagccggtcc 460
           |||||| |||| ||||||  | ||   ||||||||||||||| ||||| |||   || ||
Sbjct: 452 tcctagatacaatgctccccctccgaaccagcagtactatggtcagccgccaatgggccc 511

                                                                       
Query: 461 gcagcaaggctaccctcaacagccagatccttatgctaggcctccatatggtggacctgg 520
           |||||||||||| ||||||||||||||||| |||||||||||||||||  ||||||||||
Sbjct: 512 gcagcaaggctatcctcaacagccagatccctatgctaggcctccatacagtggacctgg 571

                    
Query: 521 acaatggcc 529
            ||||||||
Sbjct: 572 tcaatggcc 580



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 6   cagtctggtggctatggtccgcaacatcaccaccctcagggtcatggcccagcttctcag 65
           |||||||| || |||||||| |||  | ||| |||||||||||| ||  | |||||||||
Sbjct: 48  cagtctggcggatatggtccacaaggttaccgccctcagggtcaaggtgccgcttctcag 107

                            
Query: 66  tgggggcctcgttctca 82
           |||||||| ||||||||
Sbjct: 108 tgggggccacgttctca 124



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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 461   gcagcaaggctaccctcaacagc 483
             |||||||||||||||||||||||
Sbjct: 30962 gcagcaaggctaccctcaacagc 30984



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>emb|AL845317.7| Mouse DNA sequence from clone RP23-222K9 on chromosome 4 Contains a
              ribosomal protein L7 (Rpl7) pseudogene, the gene for a
              novel protein similar to stathmin 1 Stmn1 and a eukaryotic
              translation initiation factor 3 subunit 8 (Eif3s8)
              pseudogene, complete sequence
          Length = 181889

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 378    aactatggtcctggatatggtga 400
              |||||||||||||||||||||||
Sbjct: 172884 aactatggtcctggatatggtga 172862



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>gb|AC124439.4| Mus musculus BAC clone RP24-261N14 from chromosome 9, complete sequence
          Length = 162530

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    ctactacaaacagggatctc 258
              ||||||||||||||||||||
Sbjct: 108207 ctactacaaacagggatctc 108188



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>gb|AC125071.3| Mus musculus BAC clone RP23-453O8 from chromosome 12, complete sequence
          Length = 168279

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   ctgggaccagaggcaaggcc 210
             ||||||||||||||||||||
Sbjct: 16977 ctgggaccagaggcaaggcc 16958



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>gb|AY308745.1| Mus musculus cordon-bleu (cobl) mRNA, complete cds
          Length = 5454

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  ccacagcagccaccaccaag 178
            ||||||||||||||||||||
Sbjct: 1174 ccacagcagccaccaccaag 1193



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>emb|AL592153.6| Human DNA sequence from clone RP11-58K1 on chromosome 9 Contains the 3'
              end of the C9orf93 gene for chromosome 9 open reading frame
              93, complete sequence
          Length = 160425

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    accaagagggcctcctcaga 123
              ||||||||||||||||||||
Sbjct: 151485 accaagagggcctcctcaga 151466



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>emb|AL160053.15| Human DNA sequence from clone RP11-536D16 on chromosome 9 Contains the
             3' end of the variant for the C9orf93 gene for chromosome
             9 open reading frame 93, complete sequence
          Length = 172845

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   accaagagggcctcctcaga 123
             ||||||||||||||||||||
Sbjct: 43353 accaagagggcctcctcaga 43334



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>emb|AL713914.10| Mouse DNA sequence from clone RP24-293E17 on chromosome 11 Contains the
              3' end of the Cobl gene for cordon-bleu and a novel gene,
              complete sequence
          Length = 188406

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    ccacagcagccaccaccaag 178
              ||||||||||||||||||||
Sbjct: 111336 ccacagcagccaccaccaag 111317



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>emb|AL844607.4| Mouse DNA sequence from clone RP24-280G18 on chromosome 4, complete
              sequence
          Length = 160298

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 171    ccaccaagaggtggcatgggctgg 194
              |||||||| |||||||||||||||
Sbjct: 134968 ccaccaagtggtggcatgggctgg 134945



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 10      ctggtggctatggtccgcaacatc 33
               |||||||| |||||||||||||||
Sbjct: 2424573 ctggtggcgatggtccgcaacatc 2424550



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>dbj|AK147366.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1021N06 product:cordon-bleu, full insert
            sequence
          Length = 5541

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  ccacagcagccaccaccaag 178
            ||||||||||||||||||||
Sbjct: 1259 ccacagcagccaccaccaag 1278



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>dbj|AK147633.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
            full-length enriched library, clone:M5C1097E08
            product:cordon-bleu, full insert sequence
          Length = 5541

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  ccacagcagccaccaccaag 178
            ||||||||||||||||||||
Sbjct: 1259 ccacagcagccaccaccaag 1278



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>dbj|AK049730.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length
            enriched library, clone:C530045F18 product:cordon-bleu,
            full insert sequence
          Length = 3464

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  ccacagcagccaccaccaag 178
            ||||||||||||||||||||
Sbjct: 1127 ccacagcagccaccaccaag 1146



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>ref|NM_172496.2| Mus musculus cordon-bleu (Cobl), mRNA
          Length = 5454

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  ccacagcagccaccaccaag 178
            ||||||||||||||||||||
Sbjct: 1174 ccacagcagccaccaccaag 1193



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>gb|AC159649.3| Mus musculus BAC clone RP23-46D6 from chromosome 12, complete sequence
          Length = 198777

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   ctgggaccagaggcaaggcc 210
             ||||||||||||||||||||
Sbjct: 28885 ctgggaccagaggcaaggcc 28904



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>dbj|AK122334.1| Mus musculus mRNA for mKIAA0633 protein
          Length = 5447

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  ccacagcagccaccaccaag 178
            ||||||||||||||||||||
Sbjct: 1165 ccacagcagccaccaccaag 1184



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>emb|Z75742.1|HSLUCA10 Human DNA sequence from clone XXcos-10 on chromosome 3, complete
             sequence
          Length = 36016

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    cctcagggtcatggcccagc 58
             ||||||||||||||||||||
Sbjct: 25566 cctcagggtcatggcccagc 25585



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>gb|U26967.1|COBL Mus musculus cordon-bleu mRNA, partial cds
          Length = 1154

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 ccacagcagccaccaccaag 178
           ||||||||||||||||||||
Sbjct: 907 ccacagcagccaccaccaag 926


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,904,030
Number of Sequences: 3902068
Number of extensions: 3904030
Number of successful extensions: 71301
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71170
Number of HSP's gapped (non-prelim): 109
length of query: 529
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 506
effective length of database: 17,143,297,704
effective search space: 8674508638224
effective search space used: 8674508638224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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