| Clone Name | baal25m06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 434 bits (219), Expect = e-118 Identities = 460/539 (85%), Gaps = 21/539 (3%) Strand = Plus / Plus Query: 4 ctcagtctggtggctatggtccgcaacatcaccaccctcagggtcatggcccagcttctc 63 |||| |||||||| ||||||| |||| | ||| ||||||||||||||| ||||||||| Sbjct: 570550 ctcaatctggtggatatggtcagcaaaactaccgccctcagggtcatggtgcagcttctc 570609 Query: 64 agtgggggcctcgttctcaaccacagcag---tatggatatccaccaagagggcctcc-- 118 ||||||| || ||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 570610 agtggggcccacgttctcaaccccagcctggatatggatatccaccaagagggcctccac 570669 Query: 119 -tcagaacgcgccatactcccaacccccttatggtggttacccacagcagccaccaccaa 177 ||||||| ||||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 570670 ctcagaacatgccatactcccaacc---ttatggtggctacccgcagcagccaccaccaa 570726 Query: 178 gaggtggcatgggctgggaccagaggcaaggccctccgcctca---------ccagggtg 228 ||||||||||||||||||| |||||||| |||||||| || || ||| |||| Sbjct: 570727 gaggtggcatgggctgggatcagaggcagggccctccaccccatgcttcccaccatggtg 570786 Query: 229 gtggttatgactactacaaacagggatctcaaccatacgaaagccagccaccaaactacc 288 | ||||| |||||||| |||||||| ||||||||||| ||| ||||||||||||| |||| Sbjct: 570787 gcggttacgactactataaacagggttctcaaccatatgaaggccagccaccaaattacc 570846 Query: 289 cccctgggccagggaactacaacagctatggcccatcacaagctccaagctatggacagc 348 | |||||||| || |||||||| || ||||| |||||||| | |||| |||||||| | Sbjct: 570847 ctcctgggcctggaaactacaatagttatgggccatcacagggcccaaattatggacaac 570906 Query: 349 ctcagtatccgcagtctgcacctccacagaactatggtcctggatatggtgatcctaggt 408 ||||||||||||||||||||||||||||||||||||| || || |||||||||||||| | Sbjct: 570907 ctcagtatccgcagtctgcacctccacagaactatgggccgggttatggtgatcctagat 570966 Query: 409 acagtgctccagcgccagcccagcagtactatgggcagccaccagccggtccgcagcaag 468 ||| ||||||||| ||| ||||||||||||||| ||||| ||||| ||||| ||||||| Sbjct: 570967 acaatgctccagcaccaaaccagcagtactatggacagcctccagcgggtccacagcaag 571026 Query: 469 gctaccctcaacagccagatccttatgctaggcctccatatggtggacctggacaatgg 527 ||||||||| ||||| |||||| || ||||||||| ||||||||||||||||||||| Sbjct: 571027 gctaccctccacagcaagatccctacgctaggcct---tatggtggacctggacaatgg 571082
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0007D08 Length = 183142 Score = 434 bits (219), Expect = e-118 Identities = 460/539 (85%), Gaps = 21/539 (3%) Strand = Plus / Plus Query: 4 ctcagtctggtggctatggtccgcaacatcaccaccctcagggtcatggcccagcttctc 63 |||| |||||||| ||||||| |||| | ||| ||||||||||||||| ||||||||| Sbjct: 160510 ctcaatctggtggatatggtcagcaaaactaccgccctcagggtcatggtgcagcttctc 160569 Query: 64 agtgggggcctcgttctcaaccacagcag---tatggatatccaccaagagggcctcc-- 118 ||||||| || ||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 160570 agtggggcccacgttctcaaccccagcctggatatggatatccaccaagagggcctccac 160629 Query: 119 -tcagaacgcgccatactcccaacccccttatggtggttacccacagcagccaccaccaa 177 ||||||| ||||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 160630 ctcagaacatgccatactcccaacc---ttatggtggctacccgcagcagccaccaccaa 160686 Query: 178 gaggtggcatgggctgggaccagaggcaaggccctccgcctca---------ccagggtg 228 ||||||||||||||||||| |||||||| |||||||| || || ||| |||| Sbjct: 160687 gaggtggcatgggctgggatcagaggcagggccctccaccccatgcttcccaccatggtg 160746 Query: 229 gtggttatgactactacaaacagggatctcaaccatacgaaagccagccaccaaactacc 288 | ||||| |||||||| |||||||| ||||||||||| ||| ||||||||||||| |||| Sbjct: 160747 gcggttacgactactataaacagggttctcaaccatatgaaggccagccaccaaattacc 160806 Query: 289 cccctgggccagggaactacaacagctatggcccatcacaagctccaagctatggacagc 348 | |||||||| || |||||||| || ||||| |||||||| | |||| |||||||| | Sbjct: 160807 ctcctgggcctggaaactacaatagttatgggccatcacagggcccaaattatggacaac 160866 Query: 349 ctcagtatccgcagtctgcacctccacagaactatggtcctggatatggtgatcctaggt 408 ||||||||||||||||||||||||||||||||||||| || || |||||||||||||| | Sbjct: 160867 ctcagtatccgcagtctgcacctccacagaactatgggccgggttatggtgatcctagat 160926 Query: 409 acagtgctccagcgccagcccagcagtactatgggcagccaccagccggtccgcagcaag 468 ||| ||||||||| ||| ||||||||||||||| ||||| ||||| ||||| ||||||| Sbjct: 160927 acaatgctccagcaccaaaccagcagtactatggacagcctccagcgggtccacagcaag 160986 Query: 469 gctaccctcaacagccagatccttatgctaggcctccatatggtggacctggacaatgg 527 ||||||||| ||||| |||||| || ||||||||| ||||||||||||||||||||| Sbjct: 160987 gctaccctccacagcaagatccctacgctaggcct---tatggtggacctggacaatgg 161042
>dbj|AK120061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I23, full insert sequence Length = 4843 Score = 434 bits (219), Expect = e-118 Identities = 460/539 (85%), Gaps = 21/539 (3%) Strand = Plus / Plus Query: 4 ctcagtctggtggctatggtccgcaacatcaccaccctcagggtcatggcccagcttctc 63 |||| |||||||| ||||||| |||| | ||| ||||||||||||||| ||||||||| Sbjct: 3461 ctcaatctggtggatatggtcagcaaaactaccgccctcagggtcatggtgcagcttctc 3520 Query: 64 agtgggggcctcgttctcaaccacagcag---tatggatatccaccaagagggcctcc-- 118 ||||||| || ||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 3521 agtggggcccacgttctcaaccccagcctggatatggatatccaccaagagggcctccac 3580 Query: 119 -tcagaacgcgccatactcccaacccccttatggtggttacccacagcagccaccaccaa 177 ||||||| ||||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 3581 ctcagaacatgccatactcccaacc---ttatggtggctacccgcagcagccaccaccaa 3637 Query: 178 gaggtggcatgggctgggaccagaggcaaggccctccgcctca---------ccagggtg 228 ||||||||||||||||||| |||||||| |||||||| || || ||| |||| Sbjct: 3638 gaggtggcatgggctgggatcagaggcagggccctccaccccatgcttcccaccatggtg 3697 Query: 229 gtggttatgactactacaaacagggatctcaaccatacgaaagccagccaccaaactacc 288 | ||||| |||||||| |||||||| ||||||||||| ||| ||||||||||||| |||| Sbjct: 3698 gcggttacgactactataaacagggttctcaaccatatgaaggccagccaccaaattacc 3757 Query: 289 cccctgggccagggaactacaacagctatggcccatcacaagctccaagctatggacagc 348 | |||||||| || |||||||| || ||||| |||||||| | |||| |||||||| | Sbjct: 3758 ctcctgggcctggaaactacaatagttatgggccatcacagggcccaaattatggacaac 3817 Query: 349 ctcagtatccgcagtctgcacctccacagaactatggtcctggatatggtgatcctaggt 408 ||||||||||||||||||||||||||||||||||||| || || |||||||||||||| | Sbjct: 3818 ctcagtatccgcagtctgcacctccacagaactatgggccgggttatggtgatcctagat 3877 Query: 409 acagtgctccagcgccagcccagcagtactatgggcagccaccagccggtccgcagcaag 468 ||| ||||||||| ||| ||||||||||||||| ||||| ||||| ||||| ||||||| Sbjct: 3878 acaatgctccagcaccaaaccagcagtactatggacagcctccagcgggtccacagcaag 3937 Query: 469 gctaccctcaacagccagatccttatgctaggcctccatatggtggacctggacaatgg 527 ||||||||| ||||| |||||| || ||||||||| ||||||||||||||||||||| Sbjct: 3938 gctaccctccacagcaagatccctacgctaggcct---tatggtggacctggacaatgg 3993
>dbj|AK061846.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-F02, full insert sequence Length = 1569 Score = 434 bits (219), Expect = e-118 Identities = 460/539 (85%), Gaps = 21/539 (3%) Strand = Plus / Plus Query: 4 ctcagtctggtggctatggtccgcaacatcaccaccctcagggtcatggcccagcttctc 63 |||| |||||||| ||||||| |||| | ||| ||||||||||||||| ||||||||| Sbjct: 153 ctcaatctggtggatatggtcagcaaaactaccgccctcagggtcatggtgcagcttctc 212 Query: 64 agtgggggcctcgttctcaaccacagcag---tatggatatccaccaagagggcctcc-- 118 ||||||| || ||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 213 agtggggcccacgttctcaaccccagcctggatatggatatccaccaagagggcctccac 272 Query: 119 -tcagaacgcgccatactcccaacccccttatggtggttacccacagcagccaccaccaa 177 ||||||| ||||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 273 ctcagaacatgccatactcccaacc---ttatggtggctacccgcagcagccaccaccaa 329 Query: 178 gaggtggcatgggctgggaccagaggcaaggccctccgcctca---------ccagggtg 228 ||||||||||||||||||| |||||||| |||||||| || || ||| |||| Sbjct: 330 gaggtggcatgggctgggatcagaggcagggccctccaccccatgcttcccaccatggtg 389 Query: 229 gtggttatgactactacaaacagggatctcaaccatacgaaagccagccaccaaactacc 288 | ||||| |||||||| |||||||| ||||||||||| ||| ||||||||||||| |||| Sbjct: 390 gcggttacgactactataaacagggttctcaaccatatgaaggccagccaccaaattacc 449 Query: 289 cccctgggccagggaactacaacagctatggcccatcacaagctccaagctatggacagc 348 | |||||||| || |||||||| || ||||| |||||||| | |||| |||||||| | Sbjct: 450 ctcctgggcctggaaactacaatagttatgggccatcacagggcccaaattatggacaac 509 Query: 349 ctcagtatccgcagtctgcacctccacagaactatggtcctggatatggtgatcctaggt 408 ||||||||||||||||||||||||||||||||||||| || || |||||||||||||| | Sbjct: 510 ctcagtatccgcagtctgcacctccacagaactatgggccgggttatggtgatcctagat 569 Query: 409 acagtgctccagcgccagcccagcagtactatgggcagccaccagccggtccgcagcaag 468 ||| ||||||||| ||| ||||||||||||||| ||||| ||||| ||||| ||||||| Sbjct: 570 acaatgctccagcaccaaaccagcagtactatggacagcctccagcgggtccacagcaag 629 Query: 469 gctaccctcaacagccagatccttatgctaggcctccatatggtggacctggacaatgg 527 ||||||||| ||||| |||||| || ||||||||| ||||||||||||||||||||| Sbjct: 630 gctaccctccacagcaagatccctacgctaggcct---tatggtggacctggacaatgg 685
>dbj|AK099025.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124E19, full insert sequence Length = 3906 Score = 311 bits (157), Expect = 1e-81 Identities = 348/411 (84%), Gaps = 18/411 (4%) Strand = Plus / Plus Query: 4 ctcagtctggtggctatggtccgcaacatcaccaccctcagggtcatggcccagcttctc 63 |||| |||||||| ||||||| |||| | ||| ||||||||||||||| ||||||||| Sbjct: 3499 ctcaatctggtggatatggtcagcaaaactaccgccctcagggtcatggtgcagcttctc 3558 Query: 64 agtgggggcctcgttctcaaccacagcag---tatggatatccaccaagagggcctcc-- 118 ||||||| || ||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 3559 agtggggcccacgttctcaaccccagcctggatatggatatccaccaagagggcctccac 3618 Query: 119 -tcagaacgcgccatactcccaacccccttatggtggttacccacagcagccaccaccaa 177 ||||||| ||||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 3619 ctcagaacatgccatactcccaacc---ttatggtggctacccgcagcagccaccaccaa 3675 Query: 178 gaggtggcatgggctgggaccagaggcaaggccctccgcctca---------ccagggtg 228 ||||||||||||||||||| |||||||| |||||||| || || ||| |||| Sbjct: 3676 gaggtggcatgggctgggatcagaggcagggccctccaccccatgcttcccaccatggtg 3735 Query: 229 gtggttatgactactacaaacagggatctcaaccatacgaaagccagccaccaaactacc 288 | ||||| |||||||| |||||||| ||||||||||| ||| ||||||||||||| |||| Sbjct: 3736 gcggttacgactactataaacagggttctcaaccatatgaaggccagccaccaaattacc 3795 Query: 289 cccctgggccagggaactacaacagctatggcccatcacaagctccaagctatggacagc 348 | |||||||| || |||||||| || ||||| |||||||| | |||| |||||||| | Sbjct: 3796 ctcctgggcctggaaactacaatagttatgggccatcacagggcccaaattatggacaac 3855 Query: 349 ctcagtatccgcagtctgcacctccacagaactatggtcctggatatggtg 399 ||||||||||||||||||||||||||||||||||||| || || ||||||| Sbjct: 3856 ctcagtatccgcagtctgcacctccacagaactatgggccgggttatggtg 3906
>dbj|AK070714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061F15, full insert sequence Length = 2279 Score = 311 bits (157), Expect = 1e-81 Identities = 348/411 (84%), Gaps = 18/411 (4%) Strand = Plus / Plus Query: 4 ctcagtctggtggctatggtccgcaacatcaccaccctcagggtcatggcccagcttctc 63 |||| |||||||| ||||||| |||| | ||| ||||||||||||||| ||||||||| Sbjct: 1872 ctcaatctggtggatatggtcagcaaaactaccgccctcagggtcatggtgcagcttctc 1931 Query: 64 agtgggggcctcgttctcaaccacagcag---tatggatatccaccaagagggcctcc-- 118 ||||||| || ||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 1932 agtggggcccacgttctcaaccccagcctggatatggatatccaccaagagggcctccac 1991 Query: 119 -tcagaacgcgccatactcccaacccccttatggtggttacccacagcagccaccaccaa 177 ||||||| ||||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 1992 ctcagaacatgccatactcccaacc---ttatggtggctacccgcagcagccaccaccaa 2048 Query: 178 gaggtggcatgggctgggaccagaggcaaggccctccgcctca---------ccagggtg 228 ||||||||||||||||||| |||||||| |||||||| || || ||| |||| Sbjct: 2049 gaggtggcatgggctgggatcagaggcagggccctccaccccatgcttcccaccatggtg 2108 Query: 229 gtggttatgactactacaaacagggatctcaaccatacgaaagccagccaccaaactacc 288 | ||||| |||||||| |||||||| ||||||||||| ||| ||||||||||||| |||| Sbjct: 2109 gcggttacgactactataaacagggttctcaaccatatgaaggccagccaccaaattacc 2168 Query: 289 cccctgggccagggaactacaacagctatggcccatcacaagctccaagctatggacagc 348 | |||||||| || |||||||| || ||||| |||||||| | |||| |||||||| | Sbjct: 2169 ctcctgggcctggaaactacaatagttatgggccatcacagggcccaaattatggacaac 2228 Query: 349 ctcagtatccgcagtctgcacctccacagaactatggtcctggatatggtg 399 ||||||||||||||||||||||||||||||||||||| || || ||||||| Sbjct: 2229 ctcagtatccgcagtctgcacctccacagaactatgggccgggttatggtg 2279
>gb|AY104446.1| Zea mays PCO085677 mRNA sequence Length = 1489 Score = 232 bits (117), Expect = 9e-58 Identities = 305/369 (82%), Gaps = 9/369 (2%) Strand = Plus / Plus Query: 170 accaccaagaggtggcatgggctgggaccagaggcaaggccctccgcctca--------- 220 |||||||||||||||||||||||||||||||||||| |||||||| || || Sbjct: 212 accaccaagaggtggcatgggctgggaccagaggcagggccctccaccccatccttcgta 271 Query: 221 ccagggtggtggttatgactactacaaacagggatctcaaccatacgaaagccagccacc 280 ||||||||||| || ||| |||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 272 ccagggtggtgcttctgattactacaagcagggatctcagccatatgatagccagccacc 331 Query: 281 aaactacccccctgggccagggaactacaacagctatggcccatcacaagctccaagcta 340 | |||||| |||||||||||||| |||||||| ||||| | |||||| | ||| | ||| Sbjct: 332 gagctaccctcctgggccagggaattacaacagttatggtcaatcacagggtcctaacta 391 Query: 341 tggacagcctcagtatccgcagtctgcacctccacagaactatggtcctggatatggtga 400 ||| || ||||| || ||||| ||| |||| |||||||| | | ||| |||||||| Sbjct: 392 tggccaacctcaatacccgcaacatgcgcctcagcagaactacagccatgggtatggtga 451 Query: 401 tcctaggtacagtgctccagcgccagcccagcagtactatgggcagccaccagccggtcc 460 |||||| |||| |||||| | || ||||||||||||||| ||||| ||| || || Sbjct: 452 tcctagatacaatgctccccctccgaaccagcagtactatggtcagccgccaatgggccc 511 Query: 461 gcagcaaggctaccctcaacagccagatccttatgctaggcctccatatggtggacctgg 520 |||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 512 gcagcaaggctatcctcaacagccagatccctatgctaggcctccatacagtggacctgg 571 Query: 521 acaatggcc 529 |||||||| Sbjct: 572 tcaatggcc 580 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 6 cagtctggtggctatggtccgcaacatcaccaccctcagggtcatggcccagcttctcag 65 |||||||| || |||||||| ||| | ||| |||||||||||| || | ||||||||| Sbjct: 48 cagtctggcggatatggtccacaaggttaccgccctcagggtcaaggtgccgcttctcag 107 Query: 66 tgggggcctcgttctca 82 |||||||| |||||||| Sbjct: 108 tgggggccacgttctca 124
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 461 gcagcaaggctaccctcaacagc 483 ||||||||||||||||||||||| Sbjct: 30962 gcagcaaggctaccctcaacagc 30984
>emb|AL845317.7| Mouse DNA sequence from clone RP23-222K9 on chromosome 4 Contains a ribosomal protein L7 (Rpl7) pseudogene, the gene for a novel protein similar to stathmin 1 Stmn1 and a eukaryotic translation initiation factor 3 subunit 8 (Eif3s8) pseudogene, complete sequence Length = 181889 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 378 aactatggtcctggatatggtga 400 ||||||||||||||||||||||| Sbjct: 172884 aactatggtcctggatatggtga 172862
>gb|AC124439.4| Mus musculus BAC clone RP24-261N14 from chromosome 9, complete sequence Length = 162530 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ctactacaaacagggatctc 258 |||||||||||||||||||| Sbjct: 108207 ctactacaaacagggatctc 108188
>gb|AC125071.3| Mus musculus BAC clone RP23-453O8 from chromosome 12, complete sequence Length = 168279 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 ctgggaccagaggcaaggcc 210 |||||||||||||||||||| Sbjct: 16977 ctgggaccagaggcaaggcc 16958
>gb|AY308745.1| Mus musculus cordon-bleu (cobl) mRNA, complete cds Length = 5454 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ccacagcagccaccaccaag 178 |||||||||||||||||||| Sbjct: 1174 ccacagcagccaccaccaag 1193
>emb|AL592153.6| Human DNA sequence from clone RP11-58K1 on chromosome 9 Contains the 3' end of the C9orf93 gene for chromosome 9 open reading frame 93, complete sequence Length = 160425 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 accaagagggcctcctcaga 123 |||||||||||||||||||| Sbjct: 151485 accaagagggcctcctcaga 151466
>emb|AL160053.15| Human DNA sequence from clone RP11-536D16 on chromosome 9 Contains the 3' end of the variant for the C9orf93 gene for chromosome 9 open reading frame 93, complete sequence Length = 172845 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 accaagagggcctcctcaga 123 |||||||||||||||||||| Sbjct: 43353 accaagagggcctcctcaga 43334
>emb|AL713914.10| Mouse DNA sequence from clone RP24-293E17 on chromosome 11 Contains the 3' end of the Cobl gene for cordon-bleu and a novel gene, complete sequence Length = 188406 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ccacagcagccaccaccaag 178 |||||||||||||||||||| Sbjct: 111336 ccacagcagccaccaccaag 111317
>emb|AL844607.4| Mouse DNA sequence from clone RP24-280G18 on chromosome 4, complete sequence Length = 160298 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 ccaccaagaggtggcatgggctgg 194 |||||||| ||||||||||||||| Sbjct: 134968 ccaccaagtggtggcatgggctgg 134945
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 ctggtggctatggtccgcaacatc 33 |||||||| ||||||||||||||| Sbjct: 2424573 ctggtggcgatggtccgcaacatc 2424550
>dbj|AK147366.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1021N06 product:cordon-bleu, full insert sequence Length = 5541 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ccacagcagccaccaccaag 178 |||||||||||||||||||| Sbjct: 1259 ccacagcagccaccaccaag 1278
>dbj|AK147633.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1097E08 product:cordon-bleu, full insert sequence Length = 5541 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ccacagcagccaccaccaag 178 |||||||||||||||||||| Sbjct: 1259 ccacagcagccaccaccaag 1278
>dbj|AK049730.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530045F18 product:cordon-bleu, full insert sequence Length = 3464 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ccacagcagccaccaccaag 178 |||||||||||||||||||| Sbjct: 1127 ccacagcagccaccaccaag 1146
>ref|NM_172496.2| Mus musculus cordon-bleu (Cobl), mRNA Length = 5454 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ccacagcagccaccaccaag 178 |||||||||||||||||||| Sbjct: 1174 ccacagcagccaccaccaag 1193
>gb|AC159649.3| Mus musculus BAC clone RP23-46D6 from chromosome 12, complete sequence Length = 198777 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ctgggaccagaggcaaggcc 210 |||||||||||||||||||| Sbjct: 28885 ctgggaccagaggcaaggcc 28904
>dbj|AK122334.1| Mus musculus mRNA for mKIAA0633 protein Length = 5447 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ccacagcagccaccaccaag 178 |||||||||||||||||||| Sbjct: 1165 ccacagcagccaccaccaag 1184
>emb|Z75742.1|HSLUCA10 Human DNA sequence from clone XXcos-10 on chromosome 3, complete sequence Length = 36016 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cctcagggtcatggcccagc 58 |||||||||||||||||||| Sbjct: 25566 cctcagggtcatggcccagc 25585
>gb|U26967.1|COBL Mus musculus cordon-bleu mRNA, partial cds Length = 1154 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ccacagcagccaccaccaag 178 |||||||||||||||||||| Sbjct: 907 ccacagcagccaccaccaag 926 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,904,030 Number of Sequences: 3902068 Number of extensions: 3904030 Number of successful extensions: 71301 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71170 Number of HSP's gapped (non-prelim): 109 length of query: 529 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 506 effective length of database: 17,143,297,704 effective search space: 8674508638224 effective search space used: 8674508638224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)