ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal26b01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009272.1| Triticum aestivum clone wlk8.pk0011.e10:fis, full insert mRNA sequence Length = 1878 Score = 866 bits (437), Expect = 0.0 Identities = 470/481 (97%) Strand = Plus / Plus Query: 60 tggccatggcgacggcgctccgcaagctctccgcccgcggccagcccctctcccgcctca 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 tggccatggcgacggcgctccgcaagctctccgcccgcggccagcccctctcccgcctca 129 Query: 120 cgccgctctactccatggcgtccctgccggcgacggaggagagatccgcagtcacctggc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 cgccgctctactccatggcgtccctgccggcgacggaggagagatccgcagtcacctggc 189 Query: 180 cgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatcgagc 239 |||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 190 cgaagcagttgaacgcgccgctggaggaggtcgaccccgagattgccgacatcatcgagc 249 Query: 240 tcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaacttcacctccc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 tcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaacttcacctccc 309 Query: 300 tgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccg 359 ||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 310 tgtcggtgatgcaggcggtgggatccgtcatgaccaacaagtacagcgaggggtaccccg 369 Query: 360 gcgccagatactacggtggaaatgaatacattgatatggccgagacgctgtgccagaaac 419 |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 370 gcgcgagatactacggtggaaacgaatacattgatatggccgagacgctgtgtcagaaac 429 Query: 420 gtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtgcaacctctgt 479 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 430 gtgctttggaggccttcaatttggacccagagaagtggggagtgaatgtgcaacctctat 489 Query: 480 cgggttcacctgccaacttccatgtatacactgctctgctgaagccacatgacagaatta 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 cgggttcacctgccaacttccatgtatacactgctctgctgaagccacatgacagaatta 549 Query: 540 t 540 | Sbjct: 550 t 550
>ref|XM_469653.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2052 Score = 585 bits (295), Expect = e-164 Identities = 438/487 (89%), Gaps = 9/487 (1%) Strand = Plus / Plus Query: 60 tggccatggcgacggcgctccgcaagctctccgcc---------cgcggccagcccctct 110 |||||||||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 134 tggccatggcgacggcgctccgcaagctctcctccgacgccctccgccgccagccgctct 193 Query: 111 cccgcctcacgccgctctactccatggcgtccctgccggcgacggaggagagatccgcag 170 ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 194 cccgcatcaccccgctctactacatggcgtccctgccggcgacggaggagagatccggag 253 Query: 171 tcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgaca 230 ||||||||||||||||||| |||||||||||||||||||| || || ||||| ||||||| Sbjct: 254 tcacctggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgaca 313 Query: 231 tcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaact 290 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 314 tcatcgagcacgagaaggcccgccaatggaagggtctggagctcatcccgtcggagaact 373 Query: 291 tcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgagg 350 ||||||| |||| |||||||| || ||||||||||||||||| |||||||||||||||| Sbjct: 374 tcacctcggtgtcagtgatgcaggcggtgggatccgtcatgaccaacaagtacagcgagg 433 Query: 351 ggtaccccggcgccagatactacggtggaaatgaatacattgatatggccgagacgctgt 410 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | ||| Sbjct: 434 ggtaccccggcgcgagatactacggtggaaacgaatacattgatatggccgagtcattgt 493 Query: 411 gccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtgc 470 |||||||||||||||||||||||||| |||||||| | ||| |||||||||||||||| Sbjct: 494 gccagaaacgtgctttggaggccttccgcttggacccagcgaaatggggagtgaatgtgc 553 Query: 471 aacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagccacatg 530 ||||||| || || |||||||||||||||||||| |||||||| || |||| ||||||| Sbjct: 554 aacctctatcagggtcacctgccaacttccatgtttacactgccctattgaaaccacatg 613 Query: 531 acagaat 537 | ||||| Sbjct: 614 agagaat 620
>dbj|AK119226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H12, full insert sequence Length = 1923 Score = 585 bits (295), Expect = e-164 Identities = 438/487 (89%), Gaps = 9/487 (1%) Strand = Plus / Plus Query: 60 tggccatggcgacggcgctccgcaagctctccgcc---------cgcggccagcccctct 110 |||||||||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 57 tggccatggcgacggcgctccgcaagctctcctccgacgccctccgccgccagccgctct 116 Query: 111 cccgcctcacgccgctctactccatggcgtccctgccggcgacggaggagagatccgcag 170 ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 117 cccgcatcaccccgctctactacatggcgtccctgccggcgacggaggagagatccggag 176 Query: 171 tcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgaca 230 ||||||||||||||||||| |||||||||||||||||||| || || ||||| ||||||| Sbjct: 177 tcacctggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgaca 236 Query: 231 tcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaact 290 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 237 tcatcgagcacgagaaggcccgccaatggaagggtctggagctcatcccgtcggagaact 296 Query: 291 tcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgagg 350 ||||||| |||| |||||||| || ||||||||||||||||| |||||||||||||||| Sbjct: 297 tcacctcggtgtcagtgatgcaggcggtgggatccgtcatgaccaacaagtacagcgagg 356 Query: 351 ggtaccccggcgccagatactacggtggaaatgaatacattgatatggccgagacgctgt 410 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | ||| Sbjct: 357 ggtaccccggcgcgagatactacggtggaaacgaatacattgatatggccgagtcattgt 416 Query: 411 gccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtgc 470 |||||||||||||||||||||||||| |||||||| | ||| |||||||||||||||| Sbjct: 417 gccagaaacgtgctttggaggccttccgcttggacccagcgaaatggggagtgaatgtgc 476 Query: 471 aacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagccacatg 530 ||||||| || || |||||||||||||||||||| |||||||| || |||| ||||||| Sbjct: 477 aacctctatcagggtcacctgccaacttccatgtttacactgccctattgaaaccacatg 536 Query: 531 acagaat 537 | ||||| Sbjct: 537 agagaat 543
>dbj|AK100404.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086P20, full insert sequence Length = 1976 Score = 585 bits (295), Expect = e-164 Identities = 438/487 (89%), Gaps = 9/487 (1%) Strand = Plus / Plus Query: 60 tggccatggcgacggcgctccgcaagctctccgcc---------cgcggccagcccctct 110 |||||||||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 58 tggccatggcgacggcgctccgcaagctctcctccgacgccctccgccgccagccgctct 117 Query: 111 cccgcctcacgccgctctactccatggcgtccctgccggcgacggaggagagatccgcag 170 ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 118 cccgcatcaccccgctctactacatggcgtccctgccggcgacggaggagagatccggag 177 Query: 171 tcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgaca 230 ||||||||||||||||||| |||||||||||||||||||| || || ||||| ||||||| Sbjct: 178 tcacctggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgaca 237 Query: 231 tcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaact 290 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 238 tcatcgagcacgagaaggcccgccaatggaagggtctggagctcatcccgtcggagaact 297 Query: 291 tcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgagg 350 ||||||| |||| |||||||| || ||||||||||||||||| |||||||||||||||| Sbjct: 298 tcacctcggtgtcagtgatgcaggcggtgggatccgtcatgaccaacaagtacagcgagg 357 Query: 351 ggtaccccggcgccagatactacggtggaaatgaatacattgatatggccgagacgctgt 410 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | ||| Sbjct: 358 ggtaccccggcgcgagatactacggtggaaacgaatacattgatatggccgagtcattgt 417 Query: 411 gccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtgc 470 |||||||||||||||||||||||||| |||||||| | ||| |||||||||||||||| Sbjct: 418 gccagaaacgtgctttggaggccttccgcttggacccagcgaaatggggagtgaatgtgc 477 Query: 471 aacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagccacatg 530 ||||||| || || |||||||||||||||||||| |||||||| || |||| ||||||| Sbjct: 478 aacctctatcagggtcacctgccaacttccatgtttacactgccctattgaaaccacatg 537 Query: 531 acagaat 537 | ||||| Sbjct: 538 agagaat 544
>dbj|AK060674.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A01, full insert sequence Length = 1844 Score = 585 bits (295), Expect = e-164 Identities = 438/487 (89%), Gaps = 9/487 (1%) Strand = Plus / Plus Query: 60 tggccatggcgacggcgctccgcaagctctccgcc---------cgcggccagcccctct 110 |||||||||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 50 tggccatggcgacggcgctccgcaagctctcctccgacgccctccgccgccagccgctct 109 Query: 111 cccgcctcacgccgctctactccatggcgtccctgccggcgacggaggagagatccgcag 170 ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 110 cccgcatcaccccgctctactacatggcgtccctgccggcgacggaggagagatccggag 169 Query: 171 tcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgaca 230 ||||||||||||||||||| |||||||||||||||||||| || || ||||| ||||||| Sbjct: 170 tcacctggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgaca 229 Query: 231 tcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaact 290 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 230 tcatcgagcacgagaaggcccgccaatggaagggtctggagctcatcccgtcggagaact 289 Query: 291 tcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgagg 350 ||||||| |||| |||||||| || ||||||||||||||||| |||||||||||||||| Sbjct: 290 tcacctcggtgtcagtgatgcaggcggtgggatccgtcatgaccaacaagtacagcgagg 349 Query: 351 ggtaccccggcgccagatactacggtggaaatgaatacattgatatggccgagacgctgt 410 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | ||| Sbjct: 350 ggtaccccggcgcgagatactacggtggaaacgaatacattgatatggccgagtcattgt 409 Query: 411 gccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtgc 470 |||||||||||||||||||||||||| |||||||| | ||| |||||||||||||||| Sbjct: 410 gccagaaacgtgctttggaggccttccgcttggacccagcgaaatggggagtgaatgtgc 469 Query: 471 aacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagccacatg 530 ||||||| || || |||||||||||||||||||| |||||||| || |||| ||||||| Sbjct: 470 aacctctatcagggtcacctgccaacttccatgtttacactgccctattgaaaccacatg 529 Query: 531 acagaat 537 | ||||| Sbjct: 530 agagaat 536
>gb|AF439728.1|AF439728 Zea mays serine hydroxymethyltransferase mRNA, partial cds Length = 1028 Score = 212 bits (107), Expect = 9e-52 Identities = 179/203 (88%) Strand = Plus / Plus Query: 329 atgacgaacaagtacagcgaggggtaccccggcgccagatactacggtggaaatgaatac 388 ||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||| | Sbjct: 16 atgaccaacaagtacagcgaggggtaccctggcgcaagatactacgggggaaatgagttt 75 Query: 389 attgatatggccgagacgctgtgccagaaacgtgctttggaggccttcaatttggacccg 448 ||||||||||| ||| | |||| |||||||||||||||||||| ||| |||||||||| Sbjct: 76 attgatatggcagagtccttgtgtcagaaacgtgctttggaggctttccgtttggacccg 135 Query: 449 gagaagtggggagtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatac 508 | ||| ||||||||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 136 gcgaaatggggagtgaatgtgcaacctctatccggttcgcccgccaacttccatgtatac 195 Query: 509 actgctctgctgaagccacatga 531 ||||| || ||||||||||||| Sbjct: 196 actgcactcttgaagccacatga 218
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 261 aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgtgg 320 |||| |||||||||||||||||||||||||||||||| |||| |||||||| || |||| Sbjct: 30007894 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 30007953 Query: 321 gatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtggaa 380 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 30007954 gatccgtcatgaccaacaagtacagcgaggggtaccccggcgcgagatactacggtggaa 30008013 Query: 381 a 381 | Sbjct: 30008014 a 30008014 Score = 127 bits (64), Expect = 4e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 176 tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 235 |||||||||||||| |||||||||||||||||||| || || ||||| |||||||||||| Sbjct: 30007717 tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 30007776 Query: 236 gagctcgagaaggcccgccaatggaagg 263 |||| ||||||||||||||||||||||| Sbjct: 30007777 gagcacgagaaggcccgccaatggaagg 30007804 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 460 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgct 519 |||||||||||||||||| || || |||||||||||||||||||| |||||||| || | Sbjct: 30008711 agtgaatgtgcaacctctatcagggtcacctgccaacttccatgtttacactgccctatt 30008770 Query: 520 gaagccacatgacagaat 537 ||| |||||||| ||||| Sbjct: 30008771 gaaaccacatgagagaat 30008788 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 385 atacattgatatggccgagacgctgtgccagaaacgtgctttggaggccttcaatttgga 444 ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 30008158 atacattgatatggccgagtcattgtgccagaaacgtgctttggaggccttccgcttgga 30008217 Query: 445 cccggagaagtggggag 461 ||| | ||| ||||||| Sbjct: 30008218 cccagcgaaatggggag 30008234 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 136 ggcgtccctgccggcgacggaggagagatccgcagtcacc 175 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 30007561 ggcgtccctgccggcgacggaggagagatccggagtcacc 30007600 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 60 tggccatggcgacggcgctccgcaagctctcc 91 |||||||||||||||||||||||||||||||| Sbjct: 30007359 tggccatggcgacggcgctccgcaagctctcc 30007390
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Minus Query: 261 aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgtgg 320 |||| |||||||||||||||||||||||||||||||| |||| |||||||| || |||| Sbjct: 2712 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 2653 Query: 321 gatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtggaa 380 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2652 gatccgtcatgaccaacaagtacagcgaggggtaccccggcgcgagatactacggtggaa 2593 Query: 381 a 381 | Sbjct: 2592 a 2592 Score = 127 bits (64), Expect = 4e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 176 tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 235 |||||||||||||| |||||||||||||||||||| || || ||||| |||||||||||| Sbjct: 2889 tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 2830 Query: 236 gagctcgagaaggcccgccaatggaagg 263 |||| ||||||||||||||||||||||| Sbjct: 2829 gagcacgagaaggcccgccaatggaagg 2802 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 460 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgct 519 |||||||||||||||||| || || |||||||||||||||||||| |||||||| || | Sbjct: 1895 agtgaatgtgcaacctctatcagggtcacctgccaacttccatgtttacactgccctatt 1836 Query: 520 gaagccacatgacagaat 537 ||| |||||||| ||||| Sbjct: 1835 gaaaccacatgagagaat 1818 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 385 atacattgatatggccgagacgctgtgccagaaacgtgctttggaggccttcaatttgga 444 ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 2448 atacattgatatggccgagtcattgtgccagaaacgtgctttggaggccttccgcttgga 2389 Query: 445 cccggagaagtggggag 461 ||| | ||| ||||||| Sbjct: 2388 cccagcgaaatggggag 2372 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 136 ggcgtccctgccggcgacggaggagagatccgcagtcacc 175 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 3045 ggcgtccctgccggcgacggaggagagatccggagtcacc 3006 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 60 tggccatggcgacggcgctccgcaagctctcc 91 |||||||||||||||||||||||||||||||| Sbjct: 3247 tggccatggcgacggcgctccgcaagctctcc 3216
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Minus Query: 261 aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgtgg 320 |||| |||||||||||||||||||||||||||||||| |||| |||||||| || |||| Sbjct: 99857 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 99798 Query: 321 gatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtggaa 380 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 99797 gatccgtcatgaccaacaagtacagcgaggggtaccccggcgcgagatactacggtggaa 99738 Query: 381 a 381 | Sbjct: 99737 a 99737 Score = 127 bits (64), Expect = 4e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 176 tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 235 |||||||||||||| |||||||||||||||||||| || || ||||| |||||||||||| Sbjct: 100034 tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 99975 Query: 236 gagctcgagaaggcccgccaatggaagg 263 |||| ||||||||||||||||||||||| Sbjct: 99974 gagcacgagaaggcccgccaatggaagg 99947 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 460 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgct 519 |||||||||||||||||| || || |||||||||||||||||||| |||||||| || | Sbjct: 99040 agtgaatgtgcaacctctatcagggtcacctgccaacttccatgtttacactgccctatt 98981 Query: 520 gaagccacatgacagaat 537 ||| |||||||| ||||| Sbjct: 98980 gaaaccacatgagagaat 98963 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 385 atacattgatatggccgagacgctgtgccagaaacgtgctttggaggccttcaatttgga 444 ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 99593 atacattgatatggccgagtcattgtgccagaaacgtgctttggaggccttccgcttgga 99534 Query: 445 cccggagaagtggggag 461 ||| | ||| ||||||| Sbjct: 99533 cccagcgaaatggggag 99517 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 136 ggcgtccctgccggcgacggaggagagatccgcagtcacc 175 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 100190 ggcgtccctgccggcgacggaggagagatccggagtcacc 100151 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 60 tggccatggcgacggcgctccgcaagctctcc 91 |||||||||||||||||||||||||||||||| Sbjct: 100392 tggccatggcgacggcgctccgcaagctctcc 100361
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 261 aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgtgg 320 |||| |||||||||||||||||||||||||||||||| |||| |||||||| || |||| Sbjct: 30099316 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 30099375 Query: 321 gatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtggaa 380 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 30099376 gatccgtcatgaccaacaagtacagcgaggggtaccccggcgcgagatactacggtggaa 30099435 Query: 381 a 381 | Sbjct: 30099436 a 30099436 Score = 127 bits (64), Expect = 4e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 176 tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 235 |||||||||||||| |||||||||||||||||||| || || ||||| |||||||||||| Sbjct: 30099139 tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 30099198 Query: 236 gagctcgagaaggcccgccaatggaagg 263 |||| ||||||||||||||||||||||| Sbjct: 30099199 gagcacgagaaggcccgccaatggaagg 30099226 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 460 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgct 519 |||||||||||||||||| || || |||||||||||||||||||| |||||||| || | Sbjct: 30100133 agtgaatgtgcaacctctatcagggtcacctgccaacttccatgtttacactgccctatt 30100192 Query: 520 gaagccacatgacagaat 537 ||| |||||||| ||||| Sbjct: 30100193 gaaaccacatgagagaat 30100210 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 385 atacattgatatggccgagacgctgtgccagaaacgtgctttggaggccttcaatttgga 444 ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 30099580 atacattgatatggccgagtcattgtgccagaaacgtgctttggaggccttccgcttgga 30099639 Query: 445 cccggagaagtggggag 461 ||| | ||| ||||||| Sbjct: 30099640 cccagcgaaatggggag 30099656 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 136 ggcgtccctgccggcgacggaggagagatccgcagtcacc 175 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 30098983 ggcgtccctgccggcgacggaggagagatccggagtcacc 30099022 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 60 tggccatggcgacggcgctccgcaagctctcc 91 |||||||||||||||||||||||||||||||| Sbjct: 30098781 tggccatggcgacggcgctccgcaagctctcc 30098812
>dbj|AK063056.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-F04, full insert sequence Length = 791 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 261 aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgtgg 320 |||| |||||||||||||||||||||||||||||||| |||| |||||||| || |||| Sbjct: 266 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 325 Query: 321 gatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtggaa 380 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 326 gatccgtcatgaccaacaagtacagcgaggggtaccccggcgcgagatactacggtggaa 385 Query: 381 a 381 | Sbjct: 386 a 386 Score = 127 bits (64), Expect = 4e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 176 tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 235 |||||||||||||| |||||||||||||||||||| || || ||||| |||||||||||| Sbjct: 89 tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 148 Query: 236 gagctcgagaaggcccgccaatggaagg 263 |||| ||||||||||||||||||||||| Sbjct: 149 gagcacgagaaggcccgccaatggaagg 176 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 385 atacattgatatggccgagacgctgtgccagaaacgtgctttggaggccttcaatttgga 444 ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 530 atacattgatatggccgagtcattgtgccagaaacgtgctttggaggccttccgcttgga 589 Query: 445 cccggagaagtggggag 461 ||| | ||| ||||||| Sbjct: 590 cccagcgaaatggggag 606
>gb|AY105738.1| Zea mays PCO070960 mRNA sequence Length = 1476 Score = 165 bits (83), Expect = 2e-37 Identities = 146/167 (87%) Strand = Plus / Plus Query: 365 agatactacggtggaaatgaatacattgatatggccgagacgctgtgccagaaacgtgct 424 ||||||||||| |||||||| | ||||||||||| ||| | |||| |||||||||||| Sbjct: 5 agatactacgggggaaatgagtttattgatatggcagagtccttgtgtcagaaacgtgct 64 Query: 425 ttggaggccttcaatttggacccggagaagtggggagtgaatgtgcaacctctgtcgggt 484 |||||||| ||| ||||||||||| ||| ||||||||||||||||||||||| || ||| Sbjct: 65 ttggaggctttccgtttggacccggcgaaatggggagtgaatgtgcaacctctatccggt 124 Query: 485 tcacctgccaacttccatgtatacactgctctgctgaagccacatga 531 || || ||||||||||||||||||||||| || ||||||||||||| Sbjct: 125 tcgcccgccaacttccatgtatacactgcactcttgaagccacatga 171
>emb|Z25863.1|STGHMT S.tuberosum mRNA for glycine hydroxymethyltransferase Length = 1745 Score = 135 bits (68), Expect = 2e-28 Identities = 212/260 (81%) Strand = Plus / Plus Query: 218 gagattgccgacatcatcgagctcgagaaggcccgccaatggaaggggctggagctcatc 277 |||||||| ||||| || |||| ||||| || ||||||||||||||||| || ||||| Sbjct: 189 gagattgctgacattattgagcatgagaaagcacgccaatggaaggggctcgaactcatt 248 Query: 278 ccgtcggagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaac 337 || || || || ||||| || | |||||||||||||| || ||||| |||||||| ||| Sbjct: 249 ccatcagaaaatttcacttctgtttcggtgatgcaagcagttggatcagtcatgactaac 308 Query: 338 aagtacagcgaggggtaccccggcgccagatactacggtggaaatgaatacattgatatg 397 |||||||| || || || || || ||||||||||| || |||||||| ||||| || ||| Sbjct: 309 aagtacagtgaaggatatcctggtgccagatactatgggggaaatgagtacatagacatg 368 Query: 398 gccgagacgctgtgccagaaacgtgctttggaggccttcaatttggacccggagaagtgg 457 || || || | |||||||||||||||||||| || |||| ||||| || | || ||| Sbjct: 369 gcagaaaccttatgccagaaacgtgctttggaagcattcaggttggatcctgcaaaatgg 428 Query: 458 ggagtgaatgtgcaacctct 477 |||||||||||||| ||||| Sbjct: 429 ggagtgaatgtgcagcctct 448
>emb|Z25859.1|FPGHMT1 Flaveria pringlei mRNA for glycine hydroxymethyltransferase Length = 1746 Score = 127 bits (64), Expect = 4e-26 Identities = 274/344 (79%) Strand = Plus / Plus Query: 170 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 229 ||||| |||||||||||| | || || ||||| |||| || || || ||||| || || Sbjct: 169 gtcacttggccgaagcagttgaatgctccgcttgaggttgtggatcctgagatcgcggat 228 Query: 230 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 289 || || ||||| || ||||| || ||||||||||| || || ||||| || || |||||| Sbjct: 229 attattgagcttgaaaaggctcggcaatggaagggtcttgaactcataccatcagagaac 288 Query: 290 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgag 349 || ||||| || || ||||||||||| || |||||||| ||||| ||||| ||||| || Sbjct: 289 tttacctctctatcagtgatgcaagcagttggatccgtgatgaccaacaaatacagtgaa 348 Query: 350 gggtaccccggcgccagatactacggtggaaatgaatacattgatatggccgagacgctg 409 ||||| || || || |||||||| ||||||||||| || ||||| ||||| || ||| || Sbjct: 349 gggtatccaggagctagatactatggtggaaatgagtatattgacatggcggaaacgttg 408 Query: 410 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 469 || || || ||||| ||||| ||||| ||||| || | || ||||||||||||||| Sbjct: 409 tgtcaaaagcgtgcattggaagcctttcggttggatcctgcaaaatggggagtgaatgtg 468 Query: 470 caacctctgtcgggttcacctgccaacttccatgtatacactgc 513 || ||||| || || ||||| || || |||||||| |||||||| Sbjct: 469 cagcctctttcaggatcaccagctaatttccatgtctacactgc 512
>emb|Z25860.1|FPGHMT2 Flaveria pringlei mRNA for glycine hydroxymethyltransferase Length = 1779 Score = 119 bits (60), Expect = 1e-23 Identities = 237/296 (80%) Strand = Plus / Plus Query: 218 gagattgccgacatcatcgagctcgagaaggcccgccaatggaaggggctggagctcatc 277 |||||||| || || || ||||| || ||||| || ||||||||||| || || ||||| Sbjct: 208 gagattgctgatattattgagcttgaaaaggctcggcaatggaagggtcttgaactcata 267 Query: 278 ccgtcggagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaac 337 | || |||||||| ||||||||||| ||||||||||| || ||||| || ||||| ||| Sbjct: 268 ctctcagagaactttacctccctgtcagtgatgcaagcagttggatctgtgatgactaac 327 Query: 338 aagtacagcgaggggtaccccggcgccagatactacggtggaaatgaatacattgatatg 397 || ||||| || ||||| || || || |||||||| ||||||||||| |||||||| ||| Sbjct: 328 aaatacagtgaagggtatccgggtgctagatactatggtggaaatgagtacattgacatg 387 Query: 398 gccgagacgctgtgccagaaacgtgctttggaggccttcaatttggacccggagaagtgg 457 || || || |||| ||||| ||||| ||||| ||||| || || | | || ||| Sbjct: 388 gcggaaaccttgtgtcagaagcgtgccttggaagcctttcggttagatgctgcaaaatgg 447 Query: 458 ggagtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgc 513 |||||||||||||||||||| || || ||||| || || |||||||| || ||||| Sbjct: 448 ggagtgaatgtgcaacctctttcagggtcaccagcaaatttccatgtctatactgc 503
>ref|NM_119954.2| Arabidopsis thaliana SHM1 (SERINE HYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase AT4G37930 (SHM1) mRNA, complete cds Length = 1822 Score = 111 bits (56), Expect = 2e-21 Identities = 272/344 (79%) Strand = Plus / Plus Query: 170 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 229 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 256 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 315 Query: 230 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 289 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 316 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 375 Query: 290 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgag 349 ||||| || |||||||||||||||| || || || |||||||| ||||| ||||| || Sbjct: 376 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 435 Query: 350 gggtaccccggcgccagatactacggtggaaatgaatacattgatatggccgagacgctg 409 || || || || ||||||||||| || |||||||| || || || ||||| || || | Sbjct: 436 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 495 Query: 410 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 469 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 496 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 555 Query: 470 caacctctgtcgggttcacctgccaacttccatgtatacactgc 513 |||||| |||| || || ||||||||||||||||| |||||||| Sbjct: 556 caacctttgtctggatctcctgccaacttccatgtgtacactgc 599
>emb|AJ271726.1|ATH271726 Arabidopsis thaliana mRNA for serine hydroxymethyl transferase (shm1 gene) Length = 1797 Score = 111 bits (56), Expect = 2e-21 Identities = 272/344 (79%) Strand = Plus / Plus Query: 170 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 229 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 232 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 291 Query: 230 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 289 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 292 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 351 Query: 290 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgag 349 ||||| || |||||||||||||||| || || || |||||||| ||||| ||||| || Sbjct: 352 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 411 Query: 350 gggtaccccggcgccagatactacggtggaaatgaatacattgatatggccgagacgctg 409 || || || || ||||||||||| || |||||||| || || || ||||| || || | Sbjct: 412 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 471 Query: 410 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 469 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 472 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 531 Query: 470 caacctctgtcgggttcacctgccaacttccatgtatacactgc 513 |||||| |||| || || ||||||||||||||||| |||||||| Sbjct: 532 caacctttgtctggatctcctgccaacttccatgtgtacactgc 575
>gb|AY070726.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1775 Score = 111 bits (56), Expect = 2e-21 Identities = 272/344 (79%) Strand = Plus / Plus Query: 170 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 229 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 240 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 299 Query: 230 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 289 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 300 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 359 Query: 290 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgag 349 ||||| || |||||||||||||||| || || || |||||||| ||||| ||||| || Sbjct: 360 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 419 Query: 350 gggtaccccggcgccagatactacggtggaaatgaatacattgatatggccgagacgctg 409 || || || || ||||||||||| || |||||||| || || || ||||| || || | Sbjct: 420 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 479 Query: 410 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 469 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 480 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 539 Query: 470 caacctctgtcgggttcacctgccaacttccatgtatacactgc 513 |||||| |||| || || ||||||||||||||||| |||||||| Sbjct: 540 caacctttgtctggatctcctgccaacttccatgtgtacactgc 583
>gb|AY057645.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1716 Score = 111 bits (56), Expect = 2e-21 Identities = 272/344 (79%) Strand = Plus / Plus Query: 170 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 229 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 186 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 245 Query: 230 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 289 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 246 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 305 Query: 290 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgag 349 ||||| || |||||||||||||||| || || || |||||||| ||||| ||||| || Sbjct: 306 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 365 Query: 350 gggtaccccggcgccagatactacggtggaaatgaatacattgatatggccgagacgctg 409 || || || || ||||||||||| || |||||||| || || || ||||| || || | Sbjct: 366 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 425 Query: 410 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 469 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 426 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 485 Query: 470 caacctctgtcgggttcacctgccaacttccatgtatacactgc 513 |||||| |||| || || ||||||||||||||||| |||||||| Sbjct: 486 caacctttgtctggatctcctgccaacttccatgtgtacactgc 529
>gb|AF428388.1|AF428388 Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1730 Score = 111 bits (56), Expect = 2e-21 Identities = 272/344 (79%) Strand = Plus / Plus Query: 170 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 229 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 187 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 246 Query: 230 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 289 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 247 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 306 Query: 290 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgag 349 ||||| || |||||||||||||||| || || || |||||||| ||||| ||||| || Sbjct: 307 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 366 Query: 350 gggtaccccggcgccagatactacggtggaaatgaatacattgatatggccgagacgctg 409 || || || || ||||||||||| || |||||||| || || || ||||| || || | Sbjct: 367 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 426 Query: 410 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 469 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 427 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 486 Query: 470 caacctctgtcgggttcacctgccaacttccatgtatacactgc 513 |||||| |||| || || ||||||||||||||||| |||||||| Sbjct: 487 caacctttgtctggatctcctgccaacttccatgtgtacactgc 530
>gb|AY054254.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1770 Score = 111 bits (56), Expect = 2e-21 Identities = 272/344 (79%) Strand = Plus / Plus Query: 170 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 229 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 240 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 299 Query: 230 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 289 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 300 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 359 Query: 290 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgag 349 ||||| || |||||||||||||||| || || || |||||||| ||||| ||||| || Sbjct: 360 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 419 Query: 350 gggtaccccggcgccagatactacggtggaaatgaatacattgatatggccgagacgctg 409 || || || || ||||||||||| || |||||||| || || || ||||| || || | Sbjct: 420 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 479 Query: 410 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 469 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 480 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 539 Query: 470 caacctctgtcgggttcacctgccaacttccatgtatacactgc 513 |||||| |||| || || ||||||||||||||||| |||||||| Sbjct: 540 caacctttgtctggatctcctgccaacttccatgtgtacactgc 583
>gb|BT006353.1| Arabidopsis thaliana At4g37930/F20D10_50 gene, complete cds Length = 1554 Score = 111 bits (56), Expect = 2e-21 Identities = 272/344 (79%) Strand = Plus / Plus Query: 170 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 229 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 133 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 192 Query: 230 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 289 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 193 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 252 Query: 290 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgag 349 ||||| || |||||||||||||||| || || || |||||||| ||||| ||||| || Sbjct: 253 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 312 Query: 350 gggtaccccggcgccagatactacggtggaaatgaatacattgatatggccgagacgctg 409 || || || || ||||||||||| || |||||||| || || || ||||| || || | Sbjct: 313 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 372 Query: 410 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 469 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 373 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 432 Query: 470 caacctctgtcgggttcacctgccaacttccatgtatacactgc 513 |||||| |||| || || ||||||||||||||||| |||||||| Sbjct: 433 caacctttgtctggatctcctgccaacttccatgtgtacactgc 476
>emb|BX828432.1|CNS0A3VV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH89ZH08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1771 Score = 111 bits (56), Expect = 2e-21 Identities = 272/344 (79%) Strand = Plus / Plus Query: 170 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 229 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 229 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 288 Query: 230 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 289 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 289 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 348 Query: 290 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgag 349 ||||| || |||||||||||||||| || || || |||||||| ||||| ||||| || Sbjct: 349 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 408 Query: 350 gggtaccccggcgccagatactacggtggaaatgaatacattgatatggccgagacgctg 409 || || || || ||||||||||| || |||||||| || || || ||||| || || | Sbjct: 409 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 468 Query: 410 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 469 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 469 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 528 Query: 470 caacctctgtcgggttcacctgccaacttccatgtatacactgc 513 |||||| |||| || || ||||||||||||||||| |||||||| Sbjct: 529 caacctttgtctggatctcctgccaacttccatgtgtacactgc 572
>gb|AY089107.1| Arabidopsis thaliana clone 33799 mRNA, complete sequence Length = 1725 Score = 111 bits (56), Expect = 2e-21 Identities = 272/344 (79%) Strand = Plus / Plus Query: 170 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 229 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 194 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 253 Query: 230 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 289 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 254 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 313 Query: 290 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgag 349 ||||| || |||||||||||||||| || || || |||||||| ||||| ||||| || Sbjct: 314 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 373 Query: 350 gggtaccccggcgccagatactacggtggaaatgaatacattgatatggccgagacgctg 409 || || || || ||||||||||| || |||||||| || || || ||||| || || | Sbjct: 374 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 433 Query: 410 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 469 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 434 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 493 Query: 470 caacctctgtcgggttcacctgccaacttccatgtatacactgc 513 |||||| |||| || || ||||||||||||||||| |||||||| Sbjct: 494 caacctttgtctggatctcctgccaacttccatgtgtacactgc 537
>gb|DQ139269.1| Medicago truncatula serine hydroxymethyltransferase mRNA, complete cds Length = 1524 Score = 87.7 bits (44), Expect = 3e-14 Identities = 143/176 (81%) Strand = Plus / Plus Query: 254 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaa 313 |||||||||||||| ||||| || || || || || || || || |||||||||||||| Sbjct: 187 caatggaaggggctagagcttataccatcagaaaattttacgtcgttgtcggtgatgcaa 246 Query: 314 gccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactac 373 || || ||||| || |||||||| || ||||| || || || || || || |||||||| Sbjct: 247 gcggttggatcggttatgacgaataaatacagtgaaggttatcctggtgctagatactat 306 Query: 374 ggtggaaatgaatacattgatatggccgagacgctgtgccagaaacgtgctttgga 429 ||||||||||| |||||||| ||||| ||||| |||| ||||| ||||| ||||| Sbjct: 307 ggtggaaatgagtacattgacatggctgagactttgtgtcagaagcgtgcattgga 362
>gb|BT013569.1| Lycopersicon esculentum clone 132307R, mRNA sequence Length = 1923 Score = 85.7 bits (43), Expect = 1e-13 Identities = 151/187 (80%) Strand = Plus / Plus Query: 218 gagattgccgacatcatcgagctcgagaaggcccgccaatggaaggggctggagctcatc 277 |||||||||||||| || |||| ||||| || | ||||||||||| || ||||| ||| Sbjct: 223 gagattgccgacattattgagcatgagaaagctaggcaatggaagggtcttgagcttatc 282 Query: 278 ccgtcggagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaac 337 || || ||||| || || || ||||| ||||||||||| || ||||| || ||||| ||| Sbjct: 283 ccttcagagaattttacatcactgtcagtgatgcaagcagttggatcagtaatgaccaac 342 Query: 338 aagtacagcgaggggtaccccggcgccagatactacggtggaaatgaatacattgatatg 397 || ||||| || ||||| || || || |||||||| || |||||||| || ||||| ||| Sbjct: 343 aaatacagtgaagggtatcctggtgctagatactatggaggaaatgagtatattgacatg 402 Query: 398 gccgaga 404 || |||| Sbjct: 403 gcagaga 409
>ref|XM_503153.1| Yarrowia lipolytica CLIB122, YALI0D22484g predicted mRNA Length = 1446 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Plus Query: 275 atcccgtcggagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacg 334 ||||||||||| ||||||||||| | | | || ||| | ||| |||| ||||||||| | Sbjct: 175 atcccgtcggaaaacttcacctcgcaggccgtcatgaacgccctgggctccgtcatgcag 234 Query: 335 aacaagtacagcgaggggtaccccggcgccagatactacggtggaaatgaatacattgat 394 ||||||||| ||||| ||||| |||||| ||||||||||||| || || | ||||||| Sbjct: 235 aacaagtactctgagggctaccctggcgcccgatactacggtggtaacgagttcattgat 294 Query: 395 atggccgagacgctgtgccagaaacgtgctttggaggccttcaatttggaccc 447 ||||||| | ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 295 caggccgagtctctgtgccagaagcgagccctggaggcgttcaacctggaccc 347
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Plus Query: 275 atcccgtcggagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacg 334 ||||||||||| ||||||||||| | | | || ||| | ||| |||| ||||||||| | Sbjct: 2873281 atcccgtcggaaaacttcacctcgcaggccgtcatgaacgccctgggctccgtcatgcag 2873340 Query: 335 aacaagtacagcgaggggtaccccggcgccagatactacggtggaaatgaatacattgat 394 ||||||||| ||||| ||||| |||||| ||||||||||||| || || | ||||||| Sbjct: 2873341 aacaagtactctgagggctaccctggcgcccgatactacggtggtaacgagttcattgat 2873400 Query: 395 atggccgagacgctgtgccagaaacgtgctttggaggccttcaatttggaccc 447 ||||||| | ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 2873401 caggccgagtctctgtgccagaagcgagccctggaggcgttcaacctggaccc 2873453
>dbj|AK061913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A08, full insert sequence Length = 1402 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 465 atgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagc 524 ||||||||||||| || || |||||||||||||||||||| |||||||| || |||| | Sbjct: 1 atgtgcaacctctatcagggtcacctgccaacttccatgtttacactgccctattgaaac 60 Query: 525 cacatgacagaat 537 ||||||| ||||| Sbjct: 61 cacatgagagaat 73
>gb|AF442558.1| Chlamydomonas reinhardtii serine hydroxymethyltransferase (shmt) mRNA, complete cds; nuclear gene for mitochondrial product Length = 2025 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 260 aaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgtg 319 ||||| |||||||| ||||| |||||||||||| || ||||||||| | || ||| Sbjct: 254 aagggcctggagctgatcccctcggagaacttcgtgtctgcctcggtgatggaggcggtg 313 Query: 320 ggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacgg 375 || ||||||||| ||||||||||||||||| |||||||||||| | |||||||| Sbjct: 314 ggcagcgtcatgaccaacaagtacagcgagggctaccccggcgcccgctactacgg 369
>dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11E23, TM0557 Length = 87695 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Plus Query: 259 gaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgt 318 ||||||||||||||| || || || ||||| ||||| || || || || |||||||| || Sbjct: 3540 gaaggggctggagctgataccctcagagaatttcacttctctctctgtaatgcaagctgt 3599 Query: 319 gggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtgg 378 || || |||||||| ||||| ||||| || || || ||||| || |||||||| ||||| Sbjct: 3600 tggctctgtcatgacaaacaaatacagtgaaggatatcccggtgcaagatactatggtgg 3659 Query: 379 aaatga 384 |||||| Sbjct: 3660 aaatga 3665
>dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H01, TM0541, complete sequence Length = 110985 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Plus Query: 259 gaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgt 318 ||||||||||||||| || || || ||||| ||||| || || || || |||||||| || Sbjct: 91143 gaaggggctggagctgataccctcagagaatttcacttctctctctgtaatgcaagctgt 91202 Query: 319 gggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtgg 378 || || |||||||| ||||| ||||| || || || ||||| || |||||||| ||||| Sbjct: 91203 tggctctgtcatgacaaacaaatacagtgaaggatatcccggtgcaagatactatggtgg 91262 Query: 379 aaatga 384 |||||| Sbjct: 91263 aaatga 91268
>emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88 Length = 198493 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 284 gagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtac 343 ||||||||||| || |||||||||||||||| || || || |||||||| ||||| ||| Sbjct: 136557 gagaacttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatac 136498 Query: 344 agcgaggggtaccccggcgccagatactacggtggaaatga 384 || || || || || || ||||||||||| || |||||||| Sbjct: 136497 agtgaaggctatcctggtgccagatactatggaggaaatga 136457 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 460 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgc 513 ||||||||| |||||| |||| || || ||||||||||||||||| |||||||| Sbjct: 136198 agtgaatgttcaacctttgtctggatctcctgccaacttccatgtgtacactgc 136145
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project) Length = 147215 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 284 gagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtac 343 ||||||||||| || |||||||||||||||| || || || |||||||| ||||| ||| Sbjct: 22142 gagaacttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatac 22083 Query: 344 agcgaggggtaccccggcgccagatactacggtggaaatga 384 || || || || || || ||||||||||| || |||||||| Sbjct: 22082 agtgaaggctatcctggtgccagatactatggaggaaatga 22042 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 460 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgc 513 ||||||||| |||||| |||| || || ||||||||||||||||| |||||||| Sbjct: 21783 agtgaatgttcaacctttgtctggatctcctgccaacttccatgtgtacactgc 21730
>ref|NM_180750.1| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.2 mRNA, complete cds Length = 1966 Score = 63.9 bits (32), Expect = 5e-07 Identities = 122/152 (80%) Strand = Plus / Plus Query: 254 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaa 313 ||||||||||| | || || || ||||| ||||| ||||| || || || ||||||||| Sbjct: 321 caatggaagggatttgaacttataccgtcagagaatttcacttctctatctgtgatgcaa 380 Query: 314 gccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactac 373 ||||| || || || ||||| || ||||| || || || ||||| || || |||||||| Sbjct: 381 gccgttggttctgttatgactaataagtatagtgaaggataccctggagctagatactat 440 Query: 374 ggtggaaatgaatacattgatatggccgagac 405 || |||||||| |||||||| ||||| ||||| Sbjct: 441 ggaggaaatgagtacattgacatggctgagac 472
>ref|NM_122560.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.3 mRNA, complete cds Length = 2072 Score = 63.9 bits (32), Expect = 5e-07 Identities = 122/152 (80%) Strand = Plus / Plus Query: 254 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaa 313 ||||||||||| | || || || ||||| ||||| ||||| || || || ||||||||| Sbjct: 321 caatggaagggatttgaacttataccgtcagagaatttcacttctctatctgtgatgcaa 380 Query: 314 gccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactac 373 ||||| || || || ||||| || ||||| || || || ||||| || || |||||||| Sbjct: 381 gccgttggttctgttatgactaataagtatagtgaaggataccctggagctagatactat 440 Query: 374 ggtggaaatgaatacattgatatggccgagac 405 || |||||||| |||||||| ||||| ||||| Sbjct: 441 ggaggaaatgagtacattgacatggctgagac 472
>ref|NM_180749.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.1 mRNA, complete cds Length = 1962 Score = 63.9 bits (32), Expect = 5e-07 Identities = 122/152 (80%) Strand = Plus / Plus Query: 254 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaa 313 ||||||||||| | || || || ||||| ||||| ||||| || || || ||||||||| Sbjct: 321 caatggaagggatttgaacttataccgtcagagaatttcacttctctatctgtgatgcaa 380 Query: 314 gccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactac 373 ||||| || || || ||||| || ||||| || || || ||||| || || |||||||| Sbjct: 381 gccgttggttctgttatgactaataagtatagtgaaggataccctggagctagatactat 440 Query: 374 ggtggaaatgaatacattgatatggccgagac 405 || |||||||| |||||||| ||||| ||||| Sbjct: 441 ggaggaaatgagtacattgacatggctgagac 472
>gb|BT001097.1| Arabidopsis thaliana clone C104687 (D) putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1633 Score = 63.9 bits (32), Expect = 5e-07 Identities = 122/152 (80%) Strand = Plus / Plus Query: 254 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaa 313 ||||||||||| | || || || ||||| ||||| ||||| || || || ||||||||| Sbjct: 217 caatggaagggatttgaacttataccgtcagagaatttcacttctctatctgtgatgcaa 276 Query: 314 gccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactac 373 ||||| || || || ||||| || ||||| || || || ||||| || || |||||||| Sbjct: 277 gccgttggttctgttatgactaataagtatagtgaaggataccctggagctagatactat 336 Query: 374 ggtggaaatgaatacattgatatggccgagac 405 || |||||||| |||||||| ||||| ||||| Sbjct: 337 ggaggaaatgagtacattgacatggctgagac 368
>gb|AY035117.1| Arabidopsis thaliana putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1933 Score = 63.9 bits (32), Expect = 5e-07 Identities = 122/152 (80%) Strand = Plus / Plus Query: 254 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaa 313 ||||||||||| | || || || ||||| ||||| ||||| || || || ||||||||| Sbjct: 320 caatggaagggatttgaacttataccgtcagagaatttcacttctctatctgtgatgcaa 379 Query: 314 gccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactac 373 ||||| || || || ||||| || ||||| || || || ||||| || || |||||||| Sbjct: 380 gccgttggttctgttatgactaataagtatagtgaaggataccctggagctagatactat 439 Query: 374 ggtggaaatgaatacattgatatggccgagac 405 || |||||||| |||||||| ||||| ||||| Sbjct: 440 ggaggaaatgagtacattgacatggctgagac 471
>gb|BT001113.1| Arabidopsis thaliana clone C104687 (D) putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1633 Score = 63.9 bits (32), Expect = 5e-07 Identities = 122/152 (80%) Strand = Plus / Plus Query: 254 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaa 313 ||||||||||| | || || || ||||| ||||| ||||| || || || ||||||||| Sbjct: 217 caatggaagggatttgaacttataccgtcagagaatttcacttctctatctgtgatgcaa 276 Query: 314 gccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactac 373 ||||| || || || ||||| || ||||| || || || ||||| || || |||||||| Sbjct: 277 gccgttggttctgttatgactaataagtatagtgaaggataccctggagctagatactat 336 Query: 374 ggtggaaatgaatacattgatatggccgagac 405 || |||||||| |||||||| ||||| ||||| Sbjct: 337 ggaggaaatgagtacattgacatggctgagac 368
>emb|AJ871334.1| Nyctotherus ovalis partial gene for serine hydroxymethyltransferase precursor Length = 1320 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 330 tgacgaacaagtacagcgaggggtaccccggcgccagatactacgg 375 ||||||||||||||||||| || |||||| ||||||||||||||| Sbjct: 373 tgacgaacaagtacagcgaaggctaccccaacgccagatactacgg 418 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 450 agaagtggggagtgaatgtgca 471 |||||||||||||||||||||| Sbjct: 493 agaagtggggagtgaatgtgca 514
>gb|M87649.1|PEASHMTA Pisum sativum serine hydroxymethyltransferase mRNA, complete cds Length = 1803 Score = 60.0 bits (30), Expect = 8e-06 Identities = 162/206 (78%) Strand = Plus / Plus Query: 308 atgcaagccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccaga 367 |||||||| || || || |||||||| ||||| ||||| || || || || || || ||| Sbjct: 295 atgcaagctgttggctctgtcatgacaaacaaatacagtgaaggttatcctggggcaaga 354 Query: 368 tactacggtggaaatgaatacattgatatggccgagacgctgtgccagaaacgtgctttg 427 || || || |||||||| || ||||| ||||| || || || |||||||| ||||| ||| Sbjct: 355 tattatggaggaaatgagtatattgacatggcagaaacactatgccagaagcgtgccttg 414 Query: 428 gaggccttcaatttggacccggagaagtggggagtgaatgtgcaacctctgtcgggttca 487 || || || ||||| || | || ||||||||||||||||| |||||||| ||||| Sbjct: 415 gaagcatttcggttggatcctgctaaatggggagtgaatgtgcagcctctgtctggttcg 474 Query: 488 cctgccaacttccatgtatacactgc 513 ||| | ||||| || || |||||||| Sbjct: 475 ccttcaaactttcaagtttacactgc 500
>emb|CR962125.2| Medicago truncatula chromosome 5 clone mth2-179a9, COMPLETE SEQUENCE Length = 113972 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 300 tgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccg 359 |||||||||||||||| || ||||| || |||||||| || ||||| || || || || | Sbjct: 15238 tgtcggtgatgcaagcggttggatcggttatgacgaataaatacagtgaaggttatcctg 15297 Query: 360 gcgccagatactacggtggaaatga 384 | || |||||||| ||||||||||| Sbjct: 15298 gtgctagatactatggtggaaatga 15322
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 64 catggcgacggcgctccgcaagctctcc 91 |||||||||||||||||||||||||||| Sbjct: 74072 catggcgacggcgctccgcaagctctcc 74045
>ref|XM_504017.1| Yarrowia lipolytica CLIB122, YALI0E16346g predicted mRNA Length = 1416 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 335 aacaagtacagcgaggggtaccccggcgccagatactacggtgg 378 ||||||||| |||||| |||||||||||| ||||||||||||| Sbjct: 187 aacaagtactccgagggataccccggcgcccgatactacggtgg 230
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 64 catggcgacggcgctccgcaagctctcc 91 |||||||||||||||||||||||||||| Sbjct: 19473360 catggcgacggcgctccgcaagctctcc 19473333
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 136 ggcgtccctgccggcgacggaggagagatccgcagtcacc 175 ||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 26702781 ggcgtgcctgccggcgatggaggagagatccggagtcacc 26702742 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 94 ccgcggccagcccctctcccgcctcacgccgc 125 |||| |||||||||||||||||||||| |||| Sbjct: 28239947 ccgcagccagcccctctcccgcctcaccccgc 28239916
>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0694A04 Length = 141476 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 136 ggcgtccctgccggcgacggaggagagatccgcagtcacc 175 ||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 49873 ggcgtgcctgccggcgatggaggagagatccggagtcacc 49834
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 335 aacaagtacagcgaggggtaccccggcgccagatactacggtgg 378 ||||||||| |||||| |||||||||||| ||||||||||||| Sbjct: 1943290 aacaagtactccgagggataccccggcgcccgatactacggtgg 1943247
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 60 tggccatggcgacggcgctccgcaagctctc 90 ||||||| ||||||||||||||||||||||| Sbjct: 7238732 tggccatcgcgacggcgctccgcaagctctc 7238702 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 269 gagctcatcccgtcggagaacttcacctc 297 ||||||||| ||||||||||||||||||| Sbjct: 12440571 gagctcatcgcgtcggagaacttcacctc 12440543
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 60 tggccatggcgacggcgctccgcaagctctc 90 ||||||| ||||||||||||||||||||||| Sbjct: 7238611 tggccatcgcgacggcgctccgcaagctctc 7238581 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 269 gagctcatcccgtcggagaacttcacctc 297 ||||||||| ||||||||||||||||||| Sbjct: 12394941 gagctcatcgcgtcggagaacttcacctc 12394913
>emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb0078J08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121243 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 60 tggccatggcgacggcgctccgcaagctctc 90 ||||||| ||||||||||||||||||||||| Sbjct: 17374 tggccatcgcgacggcgctccgcaagctctc 17404
>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141427 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 60 tggccatggcgacggcgctccgcaagctctc 90 ||||||| ||||||||||||||||||||||| Sbjct: 95045 tggccatcgcgacggcgctccgcaagctctc 95015
>dbj|AK101088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024L02, full insert sequence Length = 1944 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 269 gagctcatcccgtcggagaacttcacctc 297 ||||||||| ||||||||||||||||||| Sbjct: 381 gagctcatcgcgtcggagaacttcacctc 409
>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163702 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 269 gagctcatcccgtcggagaacttcacctc 297 ||||||||| ||||||||||||||||||| Sbjct: 154936 gagctcatcgcgtcggagaacttcacctc 154908
>emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb0080P14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132241 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 269 gagctcatcccgtcggagaacttcacctc 297 ||||||||| ||||||||||||||||||| Sbjct: 42049 gagctcatcgcgtcggagaacttcacctc 42021
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.030 Identities = 36/40 (90%) Strand = Plus / Minus Query: 136 ggcgtccctgccggcgacggaggagagatccgcagtcacc 175 ||||| ||||||||||| ||| |||||||||| ||||||| Sbjct: 2199155 ggcgtgcctgccggcgatggaagagagatccggagtcacc 2199116 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 gacggcgctccgcaagctctcc 91 |||||||||||||||||||||| Sbjct: 9469716 gacggcgctccgcaagctctcc 9469695 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 gacggcgctccgcaagctctcc 91 |||||||||||||||||||||| Sbjct: 1316599 gacggcgctccgcaagctctcc 1316578
>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0478H03 Length = 167560 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 94 ccgcggccagcccctctcccgcctcacgccgc 125 |||| |||||||||||||||||||||| |||| Sbjct: 74454 ccgcagccagcccctctcccgcctcaccccgc 74423
>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445E10 Length = 145912 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 94 ccgcggccagcccctctcccgcctcacgccgc 125 |||| |||||||||||||||||||||| |||| Sbjct: 123941 ccgcagccagcccctctcccgcctcaccccgc 123910
>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_D01 Length = 97862 Score = 48.1 bits (24), Expect = 0.030 Identities = 36/40 (90%) Strand = Plus / Minus Query: 136 ggcgtccctgccggcgacggaggagagatccgcagtcacc 175 ||||| ||||||||||| ||| |||||||||| ||||||| Sbjct: 77417 ggcgtgcctgccggcgatggaagagagatccggagtcacc 77378
>dbj|AK110519.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-H01, full insert sequence Length = 1415 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 94 ccgcggccagcccctctcccgcctcacgccgc 125 |||| |||||||||||||||||||||| |||| Sbjct: 83 ccgcagccagcccctctcccgcctcaccccgc 52
>gb|AY616084.1| Prototheca wickerhamii plastid glycine hydroxymethyltransferase mRNA, partial cds; nuclear gene for plastid product Length = 657 Score = 48.1 bits (24), Expect = 0.030 Identities = 57/68 (83%) Strand = Plus / Plus Query: 284 gagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtac 343 ||||||||||| |||| | |||||||| || ||||| ||| |||||| ||||||||| Sbjct: 302 gagaacttcacgtcccgggcggtgatgacggcggtgggctcctgcatgaccaacaagtac 361 Query: 344 agcgaggg 351 |||||||| Sbjct: 362 agcgaggg 369
>gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete sequence Length = 110946 Score = 46.1 bits (23), Expect = 0.12 Identities = 86/107 (80%) Strand = Plus / Plus Query: 278 ccgtcggagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaac 337 ||||| ||||| ||||| || || || |||||||||||||| || || || ||||| || Sbjct: 20231 ccgtcagagaatttcacttctctatctgtgatgcaagccgttggttctgttatgactaat 20290 Query: 338 aagtacagcgaggggtaccccggcgccagatactacggtggaaatga 384 ||||| || || || ||||| || || |||||||| || |||||||| Sbjct: 20291 aagtatagtgaaggataccctggagctagatactatggaggaaatga 20337
>gb|BC066496.1| Danio rerio serine hydroxymethyltransferase 1 (soluble), mRNA (cDNA clone MGC:77524 IMAGE:6525877), complete cds Length = 1788 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 443 gacccggagaagtggggagtgaatgt 468 ||||||||||| |||||||||||||| Sbjct: 364 gacccggagaaatggggagtgaatgt 389
>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041C22, complete sequence Length = 161172 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 269 gagctcatcccgtcggagaacttcacctcc 298 ||||||||| | |||||||||||||||||| Sbjct: 84026 gagctcatcgcctcggagaacttcacctcc 84055
>ref|NM_201046.1| Danio rerio serine hydroxymethyltransferase 1 (soluble) (shmt1), mRNA Length = 1797 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 443 gacccggagaagtggggagtgaatgt 468 ||||||||||| |||||||||||||| Sbjct: 377 gacccggagaaatggggagtgaatgt 402
>gb|AC126010.13| Medicago truncatula clone mth2-20e4, complete sequence Length = 113964 Score = 44.1 bits (22), Expect = 0.47 Identities = 64/78 (82%) Strand = Plus / Plus Query: 460 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgct 519 |||||| ||||| ||| |||| ||||||||| | || || ||||| |||||||| || | Sbjct: 56204 agtgaacgtgcagcctttgtctggttcaccttcaaattttcatgtttacactgcattgtt 56263 Query: 520 gaagccacatgacagaat 537 ||| || ||||||||||| Sbjct: 56264 gaaacctcatgacagaat 56281
>gb|AY850381.1| Danio rerio serine hydroxymethyltransferase mRNA, complete cds Length = 1446 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 443 gacccggagaagtggggagtgaatgt 468 ||||||||||| |||||||||||||| Sbjct: 310 gacccggagaaatggggagtgaatgt 335
>gb|BC055527.1| Danio rerio serine hydroxymethyltransferase 1 (soluble), mRNA (cDNA clone MGC:66171 IMAGE:5601618), complete cds Length = 1797 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 443 gacccggagaagtggggagtgaatgt 468 ||||||||||| |||||||||||||| Sbjct: 377 gacccggagaaatggggagtgaatgt 402
>gb|AC068668.10| Homo sapiens chromosome 8, clone RP11-574K13, complete sequence Length = 69146 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 449 gagaagtggggagtgaatgtgcaacc 474 ||||||||| |||||||||||||||| Sbjct: 12909 gagaagtggtgagtgaatgtgcaacc 12934
>dbj|AB225985.1| Aspergillus oryzae cDNA, contig sequence: AoEST2841 Length = 1497 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 347 gaggggtaccccggcgccagatactacggtggaaatga 384 ||||| || ||||| |||||||||||||| |||||||| Sbjct: 380 gagggttatcccggtgccagatactacggaggaaatga 417
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Minus Query: 347 gaggggtaccccggcgccagatactacggtggaaatga 384 ||||| || ||||| |||||||||||||| |||||||| Sbjct: 2389134 gagggttatcccggtgccagatactacggaggaaatga 2389097
>gb|AC025856.13| Homo sapiens chromosome 8, clone RP11-430K7, complete sequence Length = 167416 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 449 gagaagtggggagtgaatgtgcaacc 474 ||||||||| |||||||||||||||| Sbjct: 96793 gagaagtggtgagtgaatgtgcaacc 96818
>gb|AC022709.7| Homo sapiens chromosome 8, clone RP11-88H1, complete sequence Length = 164290 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 449 gagaagtggggagtgaatgtgcaacc 474 ||||||||| |||||||||||||||| Sbjct: 42510 gagaagtggtgagtgaatgtgcaacc 42485
>gb|AC068349.6| Homo sapiens chromosome 8, clone RP11-696J24, complete sequence Length = 186012 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 449 gagaagtggggagtgaatgtgcaacc 474 ||||||||| |||||||||||||||| Sbjct: 147578 gagaagtggtgagtgaatgtgcaacc 147603
>gb|AC092417.2| Homo sapiens chromosome 3 clone RP11-90M23, complete sequence Length = 167263 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ctacccagaggagaggaggagg 36 |||||||||||||||||||||| Sbjct: 115074 ctacccagaggagaggaggagg 115095
>emb|BX649440.3| Zebrafish DNA sequence from clone CH211-198M12 in linkage group 3, complete sequence Length = 29954 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 443 gacccggagaagtggggagtgaatgt 468 ||||||||||| |||||||||||||| Sbjct: 10311 gacccggagaaatggggagtgaatgt 10336
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 269 gagctcatcccgtcggagaacttcacctcc 298 ||||||||| | |||||||||||||||||| Sbjct: 14860959 gagctcatcgcctcggagaacttcacctcc 14860988
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 gacggcgctccgcaagctctcc 91 |||||||||||||||||||||| Sbjct: 9870462 gacggcgctccgcaagctctcc 9870441
>dbj|AP004155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_D12 Length = 97572 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 gacggcgctccgcaagctctcc 91 |||||||||||||||||||||| Sbjct: 94307 gacggcgctccgcaagctctcc 94286
>dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073J19 Length = 165174 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 gacggcgctccgcaagctctcc 91 |||||||||||||||||||||| Sbjct: 145906 gacggcgctccgcaagctctcc 145885
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 gacggcgctccgcaagctctcc 91 |||||||||||||||||||||| Sbjct: 160704 gacggcgctccgcaagctctcc 160683
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 gacggcgctccgcaagctctcc 91 |||||||||||||||||||||| Sbjct: 67097 gacggcgctccgcaagctctcc 67076
>gb|BC049518.1| Danio rerio serine hydroxymethyltransferase 1 (soluble), mRNA (cDNA clone IMAGE:5916288), partial cds Length = 1465 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 443 gacccggagaagtggggagtgaatgt 468 ||||||||||| |||||||||||||| Sbjct: 363 gacccggagaaatggggagtgaatgt 388
>dbj|AP004254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1126_D10 Length = 90631 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 gacggcgctccgcaagctctcc 91 |||||||||||||||||||||| Sbjct: 8956 gacggcgctccgcaagctctcc 8935
>dbj|AK105624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C10, full insert sequence Length = 1811 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 269 gagctcatcccgtcggagaacttcacctcc 298 ||||||||| | |||||||||||||||||| Sbjct: 183 gagctcatcgcctcggagaacttcacctcc 212
>dbj|AK101450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039N02, full insert sequence Length = 1896 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 269 gagctcatcccgtcggagaacttcacctcc 298 ||||||||| | |||||||||||||||||| Sbjct: 184 gagctcatcgcctcggagaacttcacctcc 213
>dbj|AK071541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100I04, full insert sequence Length = 1811 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 269 gagctcatcccgtcggagaacttcacctcc 298 ||||||||| | |||||||||||||||||| Sbjct: 184 gagctcatcgcctcggagaacttcacctcc 213
>dbj|AP006193.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-815I22, complete sequence Length = 205834 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ctacccagaggagaggaggagg 36 |||||||||||||||||||||| Sbjct: 26238 ctacccagaggagaggaggagg 26259
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 96 gcggccagcccctctcccgcctcacgccgc 125 |||||||||||||| |||||| |||||||| Sbjct: 1468996 gcggccagcccctcccccgccccacgccgc 1469025
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 269 gagctcatcccgtcggagaacttcacctcc 298 ||||||||| | |||||||||||||||||| Sbjct: 14940927 gagctcatcgcctcggagaacttcacctcc 14940956
>dbj|AP000500.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:603 to 320, anti-oncogene region, section 3/3 Length = 254437 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 ctacccagaggagaggaggagg 36 |||||||||||||||||||||| Sbjct: 89803 ctacccagaggagaggaggagg 89782
>dbj|AB026899.1| Homo sapiens DNA, DLEC1 to ORCTL4 gene region, section 2/2 (downstream sequence from ORCTL4) Length = 80485 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 ctacccagaggagaggaggagg 36 |||||||||||||||||||||| Sbjct: 52474 ctacccagaggagaggaggagg 52453
>ref|XM_447650.1| Candida glabrata CBS138 hypothetical protein (CAGL0I09284g) partial mRNA Length = 1458 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 334 gaacaagtacagcgaggggtaccccggcgccagatactacggtgg 378 |||||||||| |||||| |||||||||| || ||||||||||| Sbjct: 213 gaacaagtactccgagggctaccccggcgagaggtactacggtgg 257
>emb|AL450338.5| Human DNA sequence from clone RP11-207F8 on chromosome 6 Contains a ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) pseudogene, complete sequence Length = 149216 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 452 aagtggggagtgaatgtgcaacctc 476 |||||| |||||||||||||||||| Sbjct: 5100 aagtggtgagtgaatgtgcaacctc 5124
>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence Length = 1089401 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 334 gaacaagtacagcgaggggtaccccggcgccagatactacggtgg 378 |||||||||| |||||| |||||||||| || ||||||||||| Sbjct: 895691 gaacaagtactccgagggctaccccggcgagaggtactacggtgg 895735
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 gattgccgacatcatcgagct 240 ||||||||||||||||||||| Sbjct: 2021081 gattgccgacatcatcgagct 2021061
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 caacgcgccgctggaggaggt 210 ||||||||||||||||||||| Sbjct: 1128134 caacgcgccgctggaggaggt 1128154
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 cgcaagctctccgcccgcggc 100 ||||||||||||||||||||| Sbjct: 1445067 cgcaagctctccgcccgcggc 1445047
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 ggaggtcgacccggagattgccga 228 |||||||||||||||||| ||||| Sbjct: 1921123 ggaggtcgacccggagatcgccga 1921100
>ref|XM_848436.1| PREDICTED: Canis familiaris similar to junctophilin 2 isoform 1 (LOC610874), mRNA Length = 1801 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ggcgtccctgccggcgacgg 155 |||||||||||||||||||| Sbjct: 1236 ggcgtccctgccggcgacgg 1217
>emb|AL451138.5| Human DNA sequence from clone RP11-152H3 on chromosome 9, complete sequence Length = 117273 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 451 gaagtggggagtgaatgtgcaacc 474 ||||||| |||||||||||||||| Sbjct: 10045 gaagtggtgagtgaatgtgcaacc 10068
>gb|DQ399504.1| Ictalurus punctatus clone SFFE07R serine hydroxymethyltransferase mRNA, partial cds Length = 436 Score = 40.1 bits (20), Expect = 7.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 443 gacccggagaagtggggagtgaatgtgcaacctctgtcgggttcacctgccaactt 498 ||||||||||| ||||| || |||||||| ||| || || |||||||||||||| Sbjct: 373 gacccggagaaatggggtgtaaatgtgcagccttattccgggtcacctgccaactt 428
>dbj|AB225812.1| Aspergillus oryzae cDNA, contig sequence: AoEST2667 Length = 1733 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 335 aacaagtacagcgaggggtaccccggcgccagatactacggtgg 378 ||||||||| |||||| |||||||| ||| | ||||||||||| Sbjct: 177 aacaagtactccgagggttaccccggtgcccgttactacggtgg 220
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 335 aacaagtacagcgaggggtaccccggcgccagatactacggtgg 378 ||||||||| |||||| |||||||| ||| | ||||||||||| Sbjct: 3497754 aacaagtactccgagggttaccccggtgcccgttactacggtgg 3497797
>gb|AC091814.10| Homo sapiens 12p BAC RP11-290C10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 149000 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 451 gaagtggggagtgaatgtgcaacc 474 ||||||| |||||||||||||||| Sbjct: 89962 gaagtggtgagtgaatgtgcaacc 89985
>gb|AC034176.8| Homo sapiens BAC clone RP11-755F5 from 4, complete sequence Length = 193100 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 451 gaagtggggagtgaatgtgcaacc 474 ||||||| |||||||||||||||| Sbjct: 92676 gaagtggtgagtgaatgtgcaacc 92699
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 gagctcatcccgtcggagaacttc 292 ||||||||| |||||||||||||| Sbjct: 1295505 gagctcatcgcgtcggagaacttc 1295482
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 catggcgacggcgctccgcaagctctcc 91 ||||||||||| |||| ||||||||||| Sbjct: 32282703 catggcgacggtgctctgcaagctctcc 32282730
>gb|AC156989.3| Mus musculus chromosome 1, clone RP23-379L2, complete sequence Length = 188691 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 gaaatgaatacattgatatg 397 |||||||||||||||||||| Sbjct: 40645 gaaatgaatacattgatatg 40626
>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0539D10 Length = 158691 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 catggcgacggcgctccgcaagctctcc 91 ||||||||||| |||| ||||||||||| Sbjct: 126716 catggcgacggtgctctgcaagctctcc 126743
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 catggcgacggcgctccgcaagctctcc 91 ||||||||||| |||| ||||||||||| Sbjct: 58535 catggcgacggtgctctgcaagctctcc 58562
>gb|AC154667.2| Mus musculus BAC clone RP23-153F8 from 16, complete sequence Length = 195017 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gagaacttcacctccctgtc 303 |||||||||||||||||||| Sbjct: 61233 gagaacttcacctccctgtc 61252
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 tggaggaggtcgacccggag 220 |||||||||||||||||||| Sbjct: 2278296 tggaggaggtcgacccggag 2278277
>emb|AL137062.13| Human DNA sequence from clone RP11-198M22 on chromosome 6, complete sequence Length = 137272 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 451 gaagtggggagtgaatgtgcaacc 474 ||||||| |||||||||||||||| Sbjct: 39756 gaagtggtgagtgaatgtgcaacc 39733 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,007,705 Number of Sequences: 3902068 Number of extensions: 4007705 Number of successful extensions: 87360 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86025 Number of HSP's gapped (non-prelim): 1331 length of query: 540 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 517 effective length of database: 17,143,297,704 effective search space: 8863084912968 effective search space used: 8863084912968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
