>EME1_SCHPO (Q9C103) Crossover junction endonuclease eme1 (EC 3.1.22.-)|
           (Essential meiotic endonuclease 1)
          Length = 738

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -1

Query: 292 DTPPRSTKCTAATR-FPLILVDDEEDTSPPSELSVLLGVEKNLPDSVLVYL 143
           DTP RST+C +  + F   LV   ED  P    ++ +  +K++ D++L+ L
Sbjct: 47  DTPQRSTQCDSLLKSFSTPLVSGSEDVLPSPRDALNITNKKSVTDNLLLSL 97

>Y4DW_RHISN (P55422) Hypothetical 22.9 kDa protein y4dW|
          Length = 204

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 185 RRRKEPSRQRPGVPQERWPSAGSLCAAMRALLP 87
           ++RK   R RP +P+E+WP+     +A  A +P
Sbjct: 154 QKRKRGYRPRPSLPKEKWPAEAEHESATSAPVP 186

>YD73_SCHPO (Q10328) Putative homeobox protein C32A11.03c in chromosome I|
          Length = 942

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -1

Query: 283 PRSTKCT-AATRFPLILVDDEEDTSPPSELSVLLGVEKNLPD-SVLVYLRNDGHLPALCA 110
           P+S K    A +   +L +  +DT+PP  +   +G E N+P+ SV ++ +N      L +
Sbjct: 166 PKSKKQRLTADQLAYLLREFSKDTNPPPAIREKIGRELNIPERSVTIWFQNRRAKSKLIS 225

Query: 109 RR 104
           RR
Sbjct: 226 RR 227

>CTTB2_CALJA (Q2QLF8) Cortactin-binding protein 2 (CortBP2)|
          Length = 1662

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
 Frame = +1

Query: 217  CPLHR------RRGLEGSAWPPCISSNAAACPVPK--SALWRSMWTRTRQLAGRF 357
            CPL R      R   +G ++P  I S+  +C   K  S  WR + T  R+ +GRF
Sbjct: 1414 CPLPRAELEQHRADFKGGSFPLSIVSSYNSCSKKKGESGAWRKVNTSPRRKSGRF 1468


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,174,164
Number of Sequences: 219361
Number of extensions: 1129092
Number of successful extensions: 3928
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3924
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)