ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal25l23 |
|---|---|
| Clone Library Name | barley_pub |
>VA0D1_ARATH (Q9LJI5) Probable vacuolar ATP synthase subunit d 1 (EC 3.6.3.14)| (V-ATPase d subunit 1) (Vacuolar proton pump d subunit 1) Length = 351 Score = 371 bits (953), Expect = e-103 Identities = 176/196 (89%), Positives = 191/196 (97%) Frame = +2 Query: 11 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 190 LVD+YKHMLCQA EP+STFL+YI YGHMIDNVVLIVTGTLHERDV EL+EKCHPLGMFDS Sbjct: 78 LVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHERDVQELIEKCHPLGMFDS 137 Query: 191 IASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFC 370 IA+LAVAQNMRELYRLVLVDTPLAPYFSEC+TSEDLDDMNIEIMRNTLYKAYL+DFYKFC Sbjct: 138 IATLAVAQNMRELYRLVLVDTPLAPYFSECLTSEDLDDMNIEIMRNTLYKAYLEDFYKFC 197 Query: 371 AKLGGATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAV 550 KLGGATA+IM +LL+FEADRRAVNITINSIGTELTR+DR+KLYSNFGLL+PYGHEELA+ Sbjct: 198 QKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTREDRKKLYSNFGLLYPYGHEELAI 257 Query: 551 CEDVDQVRGVMEKYPP 598 CED+DQVRGVMEKYPP Sbjct: 258 CEDIDQVRGVMEKYPP 273
>VA0D2_ARATH (Q9LHA4) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)| (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) Length = 351 Score = 369 bits (948), Expect = e-102 Identities = 175/196 (89%), Positives = 190/196 (96%) Frame = +2 Query: 11 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 190 LVD+YKHMLCQA EP+STFL+YI YGHMIDNVVLIVTGTLHERDV EL+EKCHPLGMFDS Sbjct: 78 LVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHERDVQELIEKCHPLGMFDS 137 Query: 191 IASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFC 370 IA+LAVAQNMRELYRLVLVDTPLAPYFSEC+TSEDLDDMNIEIMRNTLYKAYL+DFY FC Sbjct: 138 IATLAVAQNMRELYRLVLVDTPLAPYFSECLTSEDLDDMNIEIMRNTLYKAYLEDFYNFC 197 Query: 371 AKLGGATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAV 550 KLGGATA+IM +LL+FEADRRAVNITINSIGTELTR+DR+KLYSNFGLL+PYGHEELA+ Sbjct: 198 QKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTREDRKKLYSNFGLLYPYGHEELAI 257 Query: 551 CEDVDQVRGVMEKYPP 598 CED+DQVRGVMEKYPP Sbjct: 258 CEDIDQVRGVMEKYPP 273
>VA0D_DICDI (P54641) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 kDa accessory protein) (DVA41) Length = 356 Score = 259 bits (663), Expect = 3e-69 Identities = 122/195 (62%), Positives = 158/195 (81%), Gaps = 1/195 (0%) Frame = +2 Query: 11 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 190 LV E+ H+ QA EPLSTF+ +I+YG+MIDNVVL++TGTLHERD++EL++KCHPLG+F S Sbjct: 84 LVSEFNHIRNQAVEPLSTFMDFISYGYMIDNVVLLITGTLHERDISELVDKCHPLGLFKS 143 Query: 191 IASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFC 370 +A+L+V N+ +LY VL+DTPLAPY C++ EDLD+MN EI+RNTLYKAYL+DFY +C Sbjct: 144 MATLSVVHNVADLYNNVLIDTPLAPYIQGCLSEEDLDEMNNEIIRNTLYKAYLEDFYNYC 203 Query: 371 AKLGGATADIMCNLLSFEADRRAVNITINSIG-TELTRDDRRKLYSNFGLLFPYGHEELA 547 LGG T IM ++L FEADRR++NITINS G TEL++DDR KLY + GLL+P G +L Sbjct: 204 KYLGGQTELIMSDILKFEADRRSINITINSFGATELSKDDREKLYPSLGLLYPEGTSKLG 263 Query: 548 VCEDVDQVRGVMEKY 592 EDVDQVRG++E Y Sbjct: 264 KAEDVDQVRGILEVY 278
>VA0D1_DROME (Q9W4P5) Vacuolar ATP synthase subunit d 1 (EC 3.6.3.14) (V-ATPase| d subunit 1) (Vacuolar proton pump d subunit 1) (V-ATPase 39 kDa subunit 1) Length = 350 Score = 251 bits (641), Expect = 1e-66 Identities = 117/194 (60%), Positives = 152/194 (78%) Frame = +2 Query: 11 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 190 LV E++HM A EPLS FL +ITYG+MIDN++L++TGTLH+R ++EL+ KCHPLG F+ Sbjct: 77 LVIEFQHMRNHAVEPLSNFLDFITYGYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQ 136 Query: 191 IASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFC 370 + ++ VA ELY VLVDTPLAP+F +CI+ +DLD+MNIEI+RNTLYKAYL+ FY FC Sbjct: 137 MEAIHVASTPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYNFC 196 Query: 371 AKLGGATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAV 550 +GGATAD+MC +L+FEADRRA+ ITINS GTEL++DDR KLY N G ++P G LA Sbjct: 197 KNMGGATADVMCEILAFEADRRAIIITINSFGTELSKDDRAKLYPNCGKMYPDGLAALAR 256 Query: 551 CEDVDQVRGVMEKY 592 +D +QV+ V E Y Sbjct: 257 ADDYEQVKTVAEYY 270
>VA0D_MANSE (Q25531) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 40 kDa subunit) (M40) Length = 348 Score = 243 bits (621), Expect = 2e-64 Identities = 114/194 (58%), Positives = 150/194 (77%) Frame = +2 Query: 11 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 190 LV E++H+ + EPLSTFL +ITY +MIDN++L++TGTLH+R ++EL+ KCHPLG F+ Sbjct: 75 LVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQ 134 Query: 191 IASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFC 370 + ++ VA ELY VLVDTPLAP+F +CI+ +DLD+MNIEI+RNTLYKAYL+ FY FC Sbjct: 135 MEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYDFC 194 Query: 371 AKLGGATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAV 550 ++GG TAD+MC +L+FEADRRA+ ITINS GTEL++DDR KLY G L P G LA Sbjct: 195 KQIGGTTADVMCEILAFEADRRAIIITINSFGTELSKDDRAKLYPRCGKLNPDGLAALAR 254 Query: 551 CEDVDQVRGVMEKY 592 +D +QV+ V E Y Sbjct: 255 ADDYEQVKAVAEYY 268
>VA0D_PONPY (Q5R6I1) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) Length = 351 Score = 243 bits (619), Expect = 4e-64 Identities = 112/195 (57%), Positives = 150/195 (76%) Frame = +2 Query: 11 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 190 +V E++HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ Sbjct: 78 MVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQ 137 Query: 191 IASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFC 370 + ++ +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI+RNTLYKAYL+ FYKFC Sbjct: 138 MEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFC 197 Query: 371 AKLGGATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAV 550 LGG TAD MC +L FEADRRA ITINS GTEL+++DR KL+ + G L+P G +LA Sbjct: 198 TLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKLFPHCGRLYPEGLAQLAR 257 Query: 551 CEDVDQVRGVMEKYP 595 +D +QV+ V + YP Sbjct: 258 ADDYEQVKNVADYYP 272
>VA0D_MOUSE (P51863) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (Physophilin) Length = 351 Score = 243 bits (619), Expect = 4e-64 Identities = 112/195 (57%), Positives = 150/195 (76%) Frame = +2 Query: 11 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 190 +V E++HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ Sbjct: 78 MVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQ 137 Query: 191 IASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFC 370 + ++ +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI+RNTLYKAYL+ FYKFC Sbjct: 138 MEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFC 197 Query: 371 AKLGGATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAV 550 LGG TAD MC +L FEADRRA ITINS GTEL+++DR KL+ + G L+P G +LA Sbjct: 198 TLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKLFPHCGRLYPEGLAQLAR 257 Query: 551 CEDVDQVRGVMEKYP 595 +D +QV+ V + YP Sbjct: 258 ADDYEQVKNVADYYP 272
>VA0D_HUMAN (P61421) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (32 kDa accessory protein) Length = 351 Score = 243 bits (619), Expect = 4e-64 Identities = 112/195 (57%), Positives = 150/195 (76%) Frame = +2 Query: 11 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 190 +V E++HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ Sbjct: 78 MVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQ 137 Query: 191 IASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFC 370 + ++ +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI+RNTLYKAYL+ FYKFC Sbjct: 138 MEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFC 197 Query: 371 AKLGGATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAV 550 LGG TAD MC +L FEADRRA ITINS GTEL+++DR KL+ + G L+P G +LA Sbjct: 198 TLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKLFPHCGRLYPEGLAQLAR 257 Query: 551 CEDVDQVRGVMEKYP 595 +D +QV+ V + YP Sbjct: 258 ADDYEQVKNVADYYP 272
>VA0D_BOVIN (P61420) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (32 kDa accessory protein) Length = 351 Score = 243 bits (619), Expect = 4e-64 Identities = 112/195 (57%), Positives = 150/195 (76%) Frame = +2 Query: 11 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 190 +V E++HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ Sbjct: 78 MVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQ 137 Query: 191 IASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFC 370 + ++ +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI+RNTLYKAYL+ FYKFC Sbjct: 138 MEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFC 197 Query: 371 AKLGGATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAV 550 LGG TAD MC +L FEADRRA ITINS GTEL+++DR KL+ + G L+P G +LA Sbjct: 198 TLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKLFPHCGRLYPEGLAQLAR 257 Query: 551 CEDVDQVRGVMEKYP 595 +D +QV+ V + YP Sbjct: 258 ADDYEQVKNVADYYP 272
>VA0D_SCHPO (O13753) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) Length = 343 Score = 228 bits (580), Expect = 1e-59 Identities = 104/197 (52%), Positives = 153/197 (77%), Gaps = 3/197 (1%) Frame = +2 Query: 11 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 190 L+DE+ + QA+E LS F+ YITY +MIDN++L++TGT++ +D ++LLE+CHPLG F++ Sbjct: 74 LLDEFDLIRRQADETLSKFMDYITYAYMIDNIMLLLTGTVNGQDTHDLLERCHPLGWFET 133 Query: 191 IASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFC 370 + +L VA N+ ELY +VL++TPLAPYF +C++++DLD+ +IEI+RNTLYKAYL+DFY FC Sbjct: 134 LPALCVATNVEELYSVVLIETPLAPYFKDCLSADDLDEQHIEIIRNTLYKAYLEDFYNFC 193 Query: 371 AKLGGATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAV 550 K+G TAD M +L FEADRRA+ ITINS GTEL++++R K+Y +FG L+P+ LA Sbjct: 194 KKIGACTADTMLPILEFEADRRAITITINSFGTELSKEERAKMYPSFGRLYPFSTSILAR 253 Query: 551 CE---DVDQVRGVMEKY 592 E DV+ ++++Y Sbjct: 254 AENAGDVENACSLVKEY 270
>VA0D_NEUCR (P53659) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 kDa subunit) Length = 364 Score = 219 bits (559), Expect = 4e-57 Identities = 106/196 (54%), Positives = 143/196 (72%), Gaps = 4/196 (2%) Frame = +2 Query: 11 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 190 LV E++++ A L+ F+ Y+TYG+MIDNV L++TGTLHERD ELLE+CHPLG F++ Sbjct: 74 LVSEFRYVRANAAGSLAKFMDYLTYGYMIDNVALLITGTLHERDTRELLERCHPLGWFET 133 Query: 191 IASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFC 370 + L VA N+ ELY V+++TPLAPYF ++ +DLD++NIEI+RNTLYK YL+DFY F Sbjct: 134 MPVLCVATNIEELYNSVMIETPLAPYFKSSLSLQDLDELNIEIVRNTLYKNYLEDFYHFV 193 Query: 371 ----AKLGGATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHE 538 G TA++M LL FEADRRA+NIT+NS GTEL++ DR+KLY NFG L+P G Sbjct: 194 NTHPDMAGTPTAEVMSELLEFEADRRAINITLNSFGTELSKADRKKLYPNFGQLYPEGTL 253 Query: 539 ELAVCEDVDQVRGVME 586 L+ +D + VR +E Sbjct: 254 MLSRADDFEGVRLAVE 269
>VA0D_YEAST (P32366) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) Length = 345 Score = 186 bits (473), Expect = 3e-47 Identities = 93/194 (47%), Positives = 132/194 (68%), Gaps = 3/194 (1%) Frame = +2 Query: 11 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 190 L E+ ++ Q++ F+ YITYG+MIDNV L++TGT+H+RD E+L++CHPLG FD+ Sbjct: 76 LYHEFNYIRDQSSGSTRKFMDYITYGYMIDNVALMITGTIHDRDKGEILQRCHPLGWFDT 135 Query: 191 IASLAVAQNMRELYRLVLVDTPLAPYFSECI-TSEDLDDMNIEIMRNTLYKAYLQDFYKF 367 + +L+VA ++ LY VLVDTPLAPYF C T+E+LDDMNIEI+RN LYKAYL+DFY F Sbjct: 136 LPTLSVATDLESLYETVLVDTPLAPYFKNCFDTAEELDDMNIEIIRNKLYKAYLEDFYNF 195 Query: 368 CA-KLGGATADIMCNLLSFEADRRAVNITINSI-GTELTRDDRRKLYSNFGLLFPYGHEE 541 ++ + M LL FEADRR++NI +NS+ +++ D + L N G L+P Sbjct: 196 VTEEIPEPAKECMQTLLGFEADRRSINIALNSLQSSDIDPDLKSDLLPNIGKLYPLATFH 255 Query: 542 LAVCEDVDQVRGVM 583 LA +D + VR + Sbjct: 256 LAQAQDFEGVRAAL 269
>VA0D2_DROME (Q9VCQ3) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)| (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) (V-ATPase 39 kDa subunit 2) Length = 350 Score = 169 bits (427), Expect = 7e-42 Identities = 79/190 (41%), Positives = 123/190 (64%) Frame = +2 Query: 11 LVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDS 190 L+ +Y ++ + EPL+TF+++I Y MIDNV L+V G + R + LL CHPLG FD Sbjct: 74 LLQQYYYIRSHSTEPLTTFMEFIRYPFMIDNVALLVAGLNNHRSMKRLLRMCHPLGEFDQ 133 Query: 191 IASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFC 370 + ++ VA N EL+ VL+DTP+A + + E L +++EI+R LY+AYL+ FY +C Sbjct: 134 LGAIEVASNSAELFDAVLIDTPIARFVPRDLPMESLRYLDVEIVRAHLYRAYLEKFYAYC 193 Query: 371 AKLGGATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAV 550 ++LGG TA++M NLLSFEADRR + I +N+IG+++ +R K++ G L ++ Sbjct: 194 SQLGGNTANVMTNLLSFEADRRTITIAVNAIGSDIIPKERLKMFPTCGYLPKIALASMST 253 Query: 551 CEDVDQVRGV 580 D D++R V Sbjct: 254 LNDTDKIRDV 263
>DXR_BLOFL (Q7VRE2) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 391 Score = 31.2 bits (69), Expect = 2.4 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 5/123 (4%) Frame = +2 Query: 110 LIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTPLAPYFSECITS 289 L+++G L +V + PL DS + A+ QN+ +Y+ L L+ Y CI Sbjct: 113 LVLSGQLFMTEVYKYNASVLPL---DSEYN-AIFQNLSVIYQKKLGQVSLSQYGICCIVL 168 Query: 290 EDLDDMNIEIMRNTLYK-----AYLQDFYKFCAKLGGATADIMCNLLSFEADRRAVNITI 454 D + +I R L+K Y+ + K+ +A +M +L + N++ Sbjct: 169 TDSGGVLYKITRTKLFKITPVQVYIHPNWSMGLKISVNSATVMNRVLEYIEAHHLFNVSS 228 Query: 455 NSI 463 N I Sbjct: 229 NEI 231
>VATC_PYRHO (O57726) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 370 Score = 30.4 bits (67), Expect = 4.0 Identities = 27/136 (19%), Positives = 58/136 (42%) Frame = +2 Query: 179 MFDSIASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDF 358 MF + ++ ++ M E+ LV+++ + E + L +++++ LYK Y Sbjct: 153 MFPKVKAMVESKTMEEI--LVILE---GTEYEEPLRKLLLKEIDLQAFELELYKIYYSKL 207 Query: 359 YKFCAKLGGATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHE 538 K+ + G I + D R ++I + + + + ++ + L G+L E Sbjct: 208 LKYASSRKGEEKLISEEFIKMLIDYRNISIILRAKLSGMPSEEIKSLLIPGGMLSRAVLE 267 Query: 539 ELAVCEDVDQVRGVME 586 + EDV G +E Sbjct: 268 SMLSSEDVMMALGELE 283
>VATC_PYRAB (Q9UXU5) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 370 Score = 30.0 bits (66), Expect = 5.3 Identities = 33/165 (20%), Positives = 68/165 (41%), Gaps = 1/165 (0%) Frame = +2 Query: 95 IDNVVLIVTGTLHERDVNELLEKCHPLG-MFDSIASLAVAQNMRELYRLVLVDTPLAPYF 271 + N++ +V L + + P G M + ++A A+ M E+ LV+++ + Sbjct: 127 VRNIINVVKAKLSNMPPQDFIM---PAGKMLQKVKAMAEAKTMEEM--LVILE---GTDY 178 Query: 272 SECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADIMCNLLSFEADRRAVNIT 451 E + L+++ ++ LYK + ++ G I ++ D ++ Sbjct: 179 EEPLRRLLLNEITLQEFELELYKVHYSKLLRYVNSRKGEEKIIASEFVNMLIDYTNISTL 238 Query: 452 INSIGTELTRDDRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVME 586 + + + L ++D RKL G L E + EDV G +E Sbjct: 239 LRAKLSSLAQEDIRKLIIPGGTLSKSTIEAMINSEDVVMALGELE 283
>UHRF1_HUMAN (Q96T88) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Inverted CCAAT box-binding protein of 90 kDa) (Transcription factor ICBP90) (Nuclear zinc Length = 793 Score = 29.6 bits (65), Expect = 6.9 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 7/53 (13%) Frame = -3 Query: 374 SHKICKNPEDTLCRVCSS*SQYSCH-------PDPQM*CTLRSTVLRVYQLEP 237 S K CK+ + LCRVC +CH PD Q+ C +Y L+P Sbjct: 301 SCKHCKDDVNRLCRVC------ACHLCGGRQDPDKQLMCDECDMAFHIYCLDP 347
>TERT_YEAST (Q06163) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase| catalytic subunit) Length = 884 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 10/64 (15%) Frame = -1 Query: 232 VKLTHILSNCKRC----------NAIKHAQWMAFLQQFIDISFMQCPSNNKDNIIDHVSI 83 +++ H++ N C N ++ Q+ +FLQ+ I+++ CP D +I++ + Sbjct: 781 MQIDHVVKNISECYKSAFKDLSINVTQNMQFHSFLQRIIEMTVSGCPITKCDPLIEY-EV 839 Query: 82 RYVL 71 R+ + Sbjct: 840 RFTI 843
>AROA_STRMU (Q8DUV8) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +2 Query: 98 DNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTPLAPYFSE 277 D +++ LH VN + H +GM +IA+L V + EL R ++T +FS+ Sbjct: 363 DGMIIEGKTNLHGAKVNTFGD--HRIGMMTAIAALLVKEGEVELERAEAINTSYPTFFSD 420
>NU4M_ARTSA (P19046) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) (Fragment) Length = 71 Score = 29.3 bits (64), Expect = 9.0 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -2 Query: 528 YGNNRPKLEYSFLRSSLVSSVPILFIVMFT 439 Y R Y FL +L+SS+P+LFI+M T Sbjct: 37 YQPERLPASYYFLFYTLLSSLPLLFIIMLT 66
>RNH2_BARHE (Q6G4E3) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 223 Score = 29.3 bits (64), Expect = 9.0 Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 10/140 (7%) Frame = +2 Query: 209 AQNMRELYRLVLVDTPLAPYFSECITSEDLDDMN---IEIMRNTLYKAYLQDFYKFCAKL 379 AQ ELY +L S C + D D+ +E MR + + Y A + Sbjct: 73 AQRRYELYHEILQSALAISIASLCARTIDQSDIRKATLEAMRRCIRGLAVPAHY---ALV 129 Query: 380 GGATA--DIMCNLLSF-EADRRAVNITINSIGTELTRDDRR----KLYSNFGLLFPYGHE 538 G + C + + D+R+V+I SI ++TRD ++Y +GL G+ Sbjct: 130 DGRDIPFQLPCPATALIKGDQRSVSIAAASIIAKVTRDQMMECAGQVYKGYGLEKHVGYA 189 Query: 539 ELAVCEDVDQVRGVMEKYPP 598 LA R +EKY P Sbjct: 190 TLA-------HRAALEKYGP 202
>TGT_HELHP (Q7VHX2) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 381 Score = 29.3 bits (64), Expect = 9.0 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = +2 Query: 98 DNVVLIVTGTLHERDVNELLEKCHPLGMFD--SIASLAVAQNMRELYRLVLVDTPLAP 265 +N+ I+ G ++E ++ +G FD +I LAV + ++Y+ + TPL P Sbjct: 186 NNLFAIIQGGVNEHFRTLCAKQLVDMGDFDGFAIGGLAVGETSEQMYKTISFTTPLMP 243 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,531,357 Number of Sequences: 219361 Number of extensions: 1716852 Number of successful extensions: 4365 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 4218 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4359 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
