ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal26a16 |
|---|---|
| Clone Library Name | barley_pub |
>MYOC_DICDI (P42522) Myosin IC heavy chain| Length = 1181 Score = 34.7 bits (78), Expect = 0.16 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Frame = -3 Query: 256 PSPCQPSAVQPIL--PLGTSPGRHPIVTDQPAAVALEPLLCRAA-VPGGEDDGIEAVPLP 86 P+P P + P++ P T+PG P++ A P++ + A VPGG G A+ P Sbjct: 999 PAPAAPPSGPPVMKKPAPTAPGGAPMMKKPAPAPGGAPMMKKPAPVPGGPAPGGSAIMKP 1058 Query: 85 AG 80 AG Sbjct: 1059 AG 1060
>SPR1A_RAT (Q63532) Cornifin A (Small proline-rich protein 1A) (SPR1A) (SPRR1)| Length = 152 Score = 33.5 bits (75), Expect = 0.35 Identities = 18/44 (40%), Positives = 22/44 (50%) Frame = -3 Query: 256 PSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAAVP 125 P PCQP +P P P HP+V + VA EP C+ VP Sbjct: 93 PEPCQPKVPEPCHPKAPEP-CHPVVPEPCQPVAPEP--CQPVVP 133
>PLXB1_HUMAN (O43157) Plexin-B1 precursor (Semaphorin receptor SEP)| Length = 2135 Score = 33.5 bits (75), Expect = 0.35 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = -3 Query: 307 PADVLRDEL-PVCAAAVDPSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAA 131 P D+L L P AAV P+ P A+ P +PL P P T A +++P L Sbjct: 784 PEDLLASPLSPSEVAAVPPADPGPEALHPTVPLDLPPATVPATTFPGAMGSVKPALDWLT 843 Query: 130 VPGGE 116 GGE Sbjct: 844 REGGE 848
>CPN_DROME (Q02910) Calphotin| Length = 864 Score = 32.7 bits (73), Expect = 0.60 Identities = 25/80 (31%), Positives = 33/80 (41%) Frame = -3 Query: 385 ALYPIATVVGGDGSIASVIARALKQLPADVLRDELPVCAAAVDPSPCQPSAVQPILPLGT 206 A P+ VV + A A + A + + PV AA D PSA PI+ Sbjct: 420 AAEPVPAVVAEETPETPAPASAPVTIAALDIPEVAPVIAAPSDAPAEAPSAAAPIVSTPP 479 Query: 205 SPGRHPIVTDQPAAVALEPL 146 + P T PAAV EP+ Sbjct: 480 TTASVPETTAPPAAVPTEPI 499 Score = 28.9 bits (63), Expect = 8.7 Identities = 18/70 (25%), Positives = 29/70 (41%) Frame = -3 Query: 376 PIATVVGGDGSIASVIARALKQLPADVLRDELPVCAAAVDPSPCQPSAVQPILPLGTSPG 197 P+A ++ V++ + P +PV AA V P V P+L +P Sbjct: 140 PVAASAPTPAAVTPVVSPVIATPPVVPANTTVPV-AAPVAAVPAAVPVVAPVLAPAVAPA 198 Query: 196 RHPIVTDQPA 167 P+V + PA Sbjct: 199 VAPVVAETPA 208 Score = 28.9 bits (63), Expect = 8.7 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Frame = -3 Query: 349 GSIASVIAR--ALKQLPADVLRDELPVCAAAVDPSPCQPSAVQPILPLGTSPGRHPIVTD 176 G+I S ++ A P+ V V AAV P+P P AV P+ P T P Sbjct: 4 GTIPSPVSAPVAAPVTPSAVAAPVQVVSPAAVAPAPAAPIAVTPVAPPPTLASVQPATVT 63 Query: 175 QPA 167 PA Sbjct: 64 IPA 66
>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150) (Fragment) Length = 1324 Score = 32.0 bits (71), Expect = 1.0 Identities = 23/73 (31%), Positives = 33/73 (45%) Frame = -3 Query: 307 PADVLRDELPVCAAAVDPSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAAV 128 P+ +++ L AA + S QPS P P S H + +D PAA A + V Sbjct: 1241 PSQEMQEPLIAVAAPLAQSALQPSLETPPQPPPRSRSSHSLPSDAPAAAAGATI----RV 1296 Query: 127 PGGEDDGIEAVPL 89 G + G+ AV L Sbjct: 1297 TGEKQTGVSAVRL 1309
>V70K_EPMV (P20129) 70 kDa protein| Length = 649 Score = 31.2 bits (69), Expect = 1.8 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Frame = -3 Query: 310 LPADVLRDELPVCAAAVDPSPCQPSAVQPILPLGTSPGRHP-IVTDQPAAVALEPLLCRA 134 L DV E C + P P P+ + P+LP GT P P ++ P++++L L A Sbjct: 501 LATDVSNSETKNCPSPTVPPPFLPNHLHPLLP-GTDPPTTPRQLSPSPSSLSLRTFLDSA 559 Query: 133 AVPGGEDDGIEAVPLPA 83 + + P P+ Sbjct: 560 VISCDSSPVLPPSPSPS 576
>LZTS1_RAT (Q8CFC9) Leucine zipper putative tumor suppressor 1 (PSD-Zip70)| Length = 600 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 10/66 (15%) Frame = -3 Query: 259 DPSPCQPSAVQPILP-----LGTSPGR-----HPIVTDQPAAVALEPLLCRAAVPGGEDD 110 D + +P+A +P+LP L +SP HP+ D+P L+P LC A+ + Sbjct: 117 DKAAVRPTAFKPVLPRSGAILHSSPESTNHQLHPMPPDKPKEQELKPGLCSGALSDSGRN 176 Query: 109 GIEAVP 92 + ++P Sbjct: 177 SMSSLP 182
>LZTS1_MOUSE (P60853) Leucine zipper putative tumor suppressor 1 (F37/Esophageal| cancer-related gene-coding leucine-zipper motif) (Fez1) Length = 598 Score = 31.2 bits (69), Expect = 1.8 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 10/66 (15%) Frame = -3 Query: 259 DPSPCQPSAVQPILPLG----------TSPGRHPIVTDQPAAVALEPLLCRAAVPGGEDD 110 D +P+A +P+LP TS HP+ D+P L+P LC A+ + Sbjct: 117 DKGAVRPTAFKPVLPRSGAILHSSPESTSHQLHPMPPDKPKEQELKPGLCSGALSDSGRN 176 Query: 109 GIEAVP 92 + ++P Sbjct: 177 SMSSLP 182
>PLXB1_MOUSE (Q8CJH3) Plexin-B1 precursor| Length = 2119 Score = 31.2 bits (69), Expect = 1.8 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = -3 Query: 307 PADVLRD-ELPVCAAAVDPSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAA 131 P D+L P AAAV P+ P A+ ++ L PG P T A +++P+L Sbjct: 782 PEDLLASYPFPSDAAAVSPAEPGPEALPSMVALDQPPGTVPDTTFPGAPGSMKPVLDWLT 841 Query: 130 VPGGE 116 GGE Sbjct: 842 KGGGE 846
>NACAM_MOUSE (P70670) Nascent polypeptide-associated complex alpha subunit,| muscle-specific form (Alpha-NAC, muscle-specific form) Length = 2187 Score = 31.2 bits (69), Expect = 1.8 Identities = 26/74 (35%), Positives = 31/74 (41%) Frame = -3 Query: 313 QLPADVLRDELPVCAAAVDPSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRA 134 +LP DELP S +P QPIL P P T PA A +P+L Sbjct: 1939 KLPVPAEEDELPPLIPPEAVSGGEP--FQPILV--NMPAPKPAGTPAPAPSAKQPVLKNN 1994 Query: 133 AVPGGEDDGIEAVP 92 G E D E+VP Sbjct: 1995 KGSGTESDSDESVP 2008
>P85B_RAT (Q63788) Phosphatidylinositol 3-kinase regulatory beta subunit| (PI3-kinase p85-beta subunit) (PtdIns-3-kinase p85-beta) Length = 722 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/33 (48%), Positives = 16/33 (48%) Frame = -3 Query: 190 PIVTDQPAAVALEPLLCRAAVPGGEDDGIEAVP 92 P A A PLL RA PGGE DG E P Sbjct: 239 PATAVHALASAFGPLLLRAPPPGGEGDGSEPAP 271
>GRP2_ORYSA (P29834) Glycine-rich cell wall structural protein 2 precursor| Length = 185 Score = 30.8 bits (68), Expect = 2.3 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +2 Query: 164 GGGLIGDDGMASGRCPKGENGLYRAGLAGRGIYGSGTDG 280 GGG G+ G + G+ Y AG+ G G YGSG G Sbjct: 79 GGGGGGEGGGSGSGYGSGQGSGYGAGVGGAGGYGSGGGG 117
>NUMB_MOUSE (Q9QZS3) Protein numb homolog (m-Numb) (m-Nb)| Length = 653 Score = 30.8 bits (68), Expect = 2.3 Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 2/86 (2%) Frame = -3 Query: 325 RALKQLPADVLRDELPVCAAAVDP--SPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALE 152 R L+++ V + V AA + P P P+A+ P P H +T QP V + Sbjct: 444 RWLEEVSKSVRAQQPQVSAAPLQPVLQPPPPAAIAPPAPPFQG---HAFLTSQPVPVGVV 500 Query: 151 PLLCRAAVPGGEDDGIEAVPLPAGEL 74 P L A VP +P PA + Sbjct: 501 PPLQPAFVPTQSYPVANGMPYPASNV 526
>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1186 Score = 30.4 bits (67), Expect = 3.0 Identities = 24/59 (40%), Positives = 29/59 (49%) Frame = +3 Query: 75 SSPAGSGTASMPSSSPPGTAARQRSGSRATAAG*SVTMGWRPGDVPRGRMGCTALGWQG 251 SSPAG TAS P P G A G+ TA G++PG P R G T G++G Sbjct: 619 SSPAGYKTASPPGPPPYGKRA-PSPGAYKTA----TPPGYKPGSPPSFRTG-TPPGYRG 671
>IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Protein UL69)| Length = 841 Score = 30.4 bits (67), Expect = 3.0 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 8/98 (8%) Frame = -3 Query: 367 TVVGGDG----SIASVIARALKQLPADVLRDELPVCAAAVDPSPCQPSAV----QPILPL 212 TV G +G S S ++ +Q P ++ A PSPC PS +P Sbjct: 577 TVHGQNGARGDSAPSRKSQQSQQQPETTSKESSKTAAMPPPPSPCSPSPASRERRPSKSP 636 Query: 211 GTSPGRHPIVTDQPAAVALEPLLCRAAVPGGEDDGIEA 98 +SP H + +PA E A G ED+G+ + Sbjct: 637 SSSPRPHDPPSGEPADAEKE-----LATAGDEDEGVRS 669
>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1185 Score = 30.4 bits (67), Expect = 3.0 Identities = 24/59 (40%), Positives = 29/59 (49%) Frame = +3 Query: 75 SSPAGSGTASMPSSSPPGTAARQRSGSRATAAG*SVTMGWRPGDVPRGRMGCTALGWQG 251 SSPAG TAS P P G A G+ TA G++PG P R G T G++G Sbjct: 618 SSPAGYKTASPPGPPPYGKRA-PSPGAYKTA----TPPGYKPGSPPSFRTG-TPPGYRG 670
>PQQF_KLEPN (P27508) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)| (Pyrroloquinoline quinone biosynthesis protein F) Length = 761 Score = 30.0 bits (66), Expect = 3.9 Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 7/117 (5%) Frame = -3 Query: 409 RRPHAFIQALY-----PIATVVGGDGSIASVIARALKQLPADVLRD--ELPVCAAAVDPS 251 RRP A +QA+ P+A++ SIA I + QLP + + AA S Sbjct: 505 RRPEAILQAILRQLALPVASLTPSPESIA--IRHLMAQLPERLGTSGHQKGWLAALAGGS 562 Query: 250 PCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAAVPGGEDDGIEAVPLPAG 80 V L L T+P P+ P +E R PGG+ + +PLP G Sbjct: 563 AEDAQWVARQLSLITAPVNPPMPAPAPCRRGVE----RLVYPGGDTALLVFIPLPDG 615
>WDR24_HUMAN (Q96S15) WD-repeat protein 24| Length = 920 Score = 30.0 bits (66), Expect = 3.9 Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 11/98 (11%) Frame = -3 Query: 310 LPADVL-------RDELPVCAAAVDPSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALE 152 +PAD L DEL + +DP P + +LP P RH IV P L+ Sbjct: 664 VPADYLLGDVEGEEDELYL----LDPEHAHPEDPECVLPQEAFPLRHEIVDTPPGPEHLQ 719 Query: 151 PLLCRAAVPGGEDDGIEAVPLPAG----ELHHVPFDAR 50 V G E D P+ + + H +D+R Sbjct: 720 DKADSPHVSGSEADVASLAPVDSSFSLLSVSHALYDSR 757
>ZN366_HUMAN (Q8N895) Zinc finger protein 366| Length = 744 Score = 30.0 bits (66), Expect = 3.9 Identities = 23/73 (31%), Positives = 32/73 (43%) Frame = -3 Query: 298 VLRDELPVCAAAVDPSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAAVPGG 119 +++DE AV +P P +QP+ G +P RHP P A+ R P G Sbjct: 7 MIKDEDVHFDLAVKKTPSFPHCLQPVASRGKAPQRHPF----PEALRGPFSQFRYEPPPG 62 Query: 118 EDDGIEAVPLPAG 80 + DG V AG Sbjct: 63 DLDGFPGVFEGAG 75
>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)| Length = 419 Score = 30.0 bits (66), Expect = 3.9 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 5/88 (5%) Frame = +2 Query: 29 DKVLPAMTSIEG-DVVEFAGGERHRFDAIVFATGYRSTAKKWLKSDGGGLIGDDGMASGR 205 ++V AM +I G D F G + ++ +T TA + G G +G S Sbjct: 119 ERVEDAMEAISGLDNTAFQG----KLMSVKLSTSRLRTAPGMGERTGCYRCGQEGHWSKE 174 Query: 206 CPKGENGLYRAGLAGRGI----YGSGTD 277 CP +NG YR G + G + SG D Sbjct: 175 CPLDQNGSYREGPSSEGFGPVRFDSGGD 202
>HUNB_DROCY (O46238) Protein hunchback (Fragments)| Length = 198 Score = 29.6 bits (65), Expect = 5.1 Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 12/89 (13%) Frame = -3 Query: 316 KQLPADVLRDELPVCAAAVDPSPCQ------------PSAVQPILPLGTSPGRHPIVTDQ 173 +Q P D L CAAA+ PSP P+ +Q I+P P T Sbjct: 81 QQQPMDTL------CAAAMTPSPSNNDQNSPLMPPGLPNPMQSIMPANLRPCPTATTTTT 134 Query: 172 PAAVALEPLLCRAAVPGGEDDGIEAVPLP 86 PAA A P A + +D ++A+ P Sbjct: 135 PAAAA--PTTTAATIVLQANDKLQALTPP 161
>HUNB_DROSL (O46256) Protein hunchback (Fragments)| Length = 196 Score = 29.6 bits (65), Expect = 5.1 Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 12/89 (13%) Frame = -3 Query: 316 KQLPADVLRDELPVCAAAVDPS------------PCQPSAVQPILPLGTSPGRHPIVTDQ 173 +Q P D L CAAA+ PS P P+ +Q I+P P T Sbjct: 79 QQQPMDTL------CAAAMTPSSSNNDQNSPLMPPGLPNPMQSIMPANLRPSPTATTTTT 132 Query: 172 PAAVALEPLLCRAAVPGGEDDGIEAVPLP 86 PAA A P A + +D ++A+ P Sbjct: 133 PAAAA--PTTTAATIALQANDKLQALTPP 159
>PLCL4_HUMAN (O75038) 1-phosphatidylinositol-4,5-bisphosphate| phosphodiesterase-like 4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-like 4) (Phospholipase C-like 4) (Fragment) Length = 1182 Score = 29.3 bits (64), Expect = 6.7 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +3 Query: 63 GTWWSSPAGSGTASMPSSSPPGTAARQRS 149 G W P GSG+ S SSSP +RS Sbjct: 1113 GAWRQGPGGSGSMSSDSSSPDSPGIPERS 1141
>FMO5_CAVPO (P49109) Dimethylaniline monooxygenase [N-oxide-forming] 5 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 5) (FMO 5) (Dimethylaniline oxidase 5) Length = 532 Score = 29.3 bits (64), Expect = 6.7 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 8/42 (19%) Frame = +2 Query: 29 DKVLPAMTSIEGDVVEFA--------GGERHRFDAIVFATGY 130 ++++ M ++G+V EF G DA++FATGY Sbjct: 290 NRIIAGMVKVKGNVKEFTETAAIFEDGSREDDIDAVIFATGY 331
>USPA_PASMU (Q9CLE9) Universal stress protein A homolog| Length = 141 Score = 29.3 bits (64), Expect = 6.7 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Frame = -3 Query: 421 RITTRRPHAFIQ----ALYPIATVVGGDGSIASVIARALKQLPADVL 293 RI+T + +Q + YP+A + G G + V+A A+++ D+L Sbjct: 60 RISTETQQSLVQLAENSSYPVAEKLSGSGDLGQVLADAIEKYDVDLL 106
>SPR1A_MOUSE (Q62266) Cornifin A (Small proline-rich protein 1A) (SPR1A) (SPR1| A) Length = 144 Score = 29.3 bits (64), Expect = 6.7 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = -3 Query: 256 PSPCQPSAVQPILPLGTSPGRHPIVTDQ-PAAVALEP 149 P PCQP A +P P P HP+V + P+ V P Sbjct: 101 PEPCQPKAPEPCHPKAPEP-CHPVVPEPCPSTVTPSP 136
>PLCB3_HUMAN (Q01970) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| beta 3 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (Phospholipase C-beta-3) (PLC-beta-3) Length = 1234 Score = 29.3 bits (64), Expect = 6.7 Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 5/62 (8%) Frame = -3 Query: 244 QPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAAVPGGEDDGI-----EAVPLPAG 80 QPS+ PL SP R P T PA+ +L + PG DD I E P P Sbjct: 903 QPSSNPTPSPLDASPRRPPGPTTSPASTSL-------SSPGQRDDLIASILSEVAPTPLD 955 Query: 79 EL 74 EL Sbjct: 956 EL 957
>NHAB_RHOER (P13449) Nitrile hydratase subunit beta (EC 4.2.1.84) (Nitrilase)| (NHase) Length = 212 Score = 29.3 bits (64), Expect = 6.7 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = +2 Query: 185 DGMASGRCPKGENGLYRAGLAGRGIYGSGTDGEFIAEDISRQLLQ 319 D + GR GE Y A ++GS TDG + D+ L+ Sbjct: 165 DAIGHGRNDAGEEPTYHVKFAAEELFGSDTDGGSVVVDLFEGYLE 209
>K1C9_HUMAN (P35527) Keratin, type I cytoskeletal 9 (Cytokeratin-9) (CK-9)| (Keratin-9) (K9) Length = 623 Score = 28.9 bits (63), Expect = 8.7 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 3/71 (4%) Frame = +2 Query: 77 FAGGERHRFDAIVFATGYRSTAKKWLKSDGGGLIGDDGMA---SGRCPKGENGLYRAGLA 247 + GG F A G+ ++ + + GGG G G G G Y +G Sbjct: 73 YGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFG 132 Query: 248 GRGIYGSGTDG 280 G G +G G G Sbjct: 133 GLGGFGGGAGG 143
>LZTS1_HUMAN (Q9Y250) Leucine zipper putative tumor suppressor 1 (F37/esophageal| cancer-related gene-coding leucine-zipper motif) (Fez1) Length = 595 Score = 28.9 bits (63), Expect = 8.7 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 10/61 (16%) Frame = -3 Query: 244 QPSAVQPILP-----LGTSPGR-----HPIVTDQPAAVALEPLLCRAAVPGGEDDGIEAV 95 +P+A +P+LP L +SP HP D+P L+P LC A+ + + ++ Sbjct: 122 RPTAFKPVLPRSGAILHSSPESASHQLHPAPPDKPKEQELKPGLCSGALSDSGRNSMSSL 181 Query: 94 P 92 P Sbjct: 182 P 182
>FIBA_HUMAN (P02671) Fibrinogen alpha chain precursor [Contains: Fibrinopeptide| A] Length = 866 Score = 28.9 bits (63), Expect = 8.7 Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 13/63 (20%) Frame = +3 Query: 78 SPAGSGTASM----PSSSPPGTAARQRSGSRATAAG*SVTMG---------WRPGDVPRG 218 +P SGT P SS PG+ SGS T + + G W PG RG Sbjct: 309 NPGSSGTGGTATWKPGSSGPGSTGSWNSGSSGTGSTGNQNPGSPRPGSTGTWNPGSSERG 368 Query: 219 RMG 227 G Sbjct: 369 SAG 371
>SELU_RALEJ (Q476K0) tRNA 2-selenouridine synthase (EC 2.9.1.-)| (Selenophosphate-dependent tRNA 2-selenouridine synthase) Length = 366 Score = 28.9 bits (63), Expect = 8.7 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = -3 Query: 244 QPSAVQPILPLG--TSPGRHPIVTDQPAAVALEPLLCRAAVPGGEDDGIEAVPLP 86 Q +A Q L LG T G+ ++ + PAAV LE L C G G A P P Sbjct: 137 QAAAKQDFLVLGGLTGTGKTDVIAEVPAAVDLEGLACHR----GSAFGRRAQPQP 187
>RAB12_MOUSE (P35283) Ras-related protein Rab-12 (Rab-13) (Fragment)| Length = 191 Score = 28.9 bits (63), Expect = 8.7 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -3 Query: 319 LKQLPADVLRDELPVCAAAVDPSPCQPSAVQPILP 215 LK++P DVLR+EL ++ P P P + P P Sbjct: 152 LKKMPLDVLRNELSNSILSLQPEPEIPPELPPPRP 186
>SMAD5_BRARE (Q9W7E7) Mothers against decapentaplegic homolog 5 (SMAD 5)| (Mothers against DPP homolog 5) (Smad5) (Somitabun protein) Length = 464 Score = 28.9 bits (63), Expect = 8.7 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 8/63 (12%) Frame = +3 Query: 54 ASKGTWWSSPAGSGTAS---MPSSSPPGT-----AARQRSGSRATAAG*SVTMGWRPGDV 209 AS GT+ +SPA SG +S +P+ +PP + GS++ G S+ P ++ Sbjct: 199 ASSGTYPNSPASSGPSSPFQLPADTPPPAYMPPDEQMGQDGSQSMETGSSLA----PQNM 254 Query: 210 PRG 218 PRG Sbjct: 255 PRG 257
>NADB_PYRAB (Q9V2R0) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate| synthetase B) Length = 464 Score = 28.9 bits (63), Expect = 8.7 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 5/41 (12%) Frame = +2 Query: 77 FAGGERHRFDAIVFATG-----YRSTAKKWLKSDGGGLIGD 184 F GE +FDA+V ATG YR TA +K + G LIGD Sbjct: 158 FLNGELLKFDAVVVATGGFSGLYRFTA--GVKENIGLLIGD 196 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,818,869 Number of Sequences: 219361 Number of extensions: 1294009 Number of successful extensions: 5930 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5409 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5896 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
