ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal26a16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_493785.1| Oryza sativa (japonica cultivar-group), Ozsa850... 78 3e-11
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
3dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
4ref|XM_493782.1| Oryza sativa (japonica cultivar-group), Ozsa850... 58 3e-05
5dbj|AK109645.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
6gb|DQ415456.1| Antheraea roylii D-loop, complete sequence; mitoc... 46 0.11
7emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4,... 44 0.45
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.45
9dbj|AK111485.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.45
10gb|AC169813.2| Rhesus Macaque BAC CH250-16M3 (Children's Hospit... 42 1.8
11gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 42 1.8
12gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 1.8
13emb|CR749774.14| Zebrafish DNA sequence from clone CH211-167E20 ... 42 1.8
14gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.8
15emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete ... 42 1.8
16gb|AE005753.1| Caulobacter crescentus CB15 section 79 of 359 of ... 42 1.8
17gb|AC026115.27| Homo sapiens 12 BAC RP11-1026F22 (Roswell Park C... 42 1.8
18emb|CR792414.6| Zebrafish DNA sequence from clone CH211-95O10 in... 42 1.8
19emb|BX901908.8| Zebrafish DNA sequence from clone DKEY-268B12 in... 42 1.8
20emb|AL954657.14| Zebrafish DNA sequence from clone CH211-223E21 ... 42 1.8
21gb|DQ322651.1| Streptomyces sp. FR1 plasmid pFRL1, complete sequ... 42 1.8
22ref|NM_192293.1| Oryza sativa (japonica cultivar-group), predic... 40 7.0
23gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 7.0
24ref|XM_420224.1| PREDICTED: Gallus gallus similar to RIKEN cDNA ... 40 7.0
25emb|BX323794.17| Zebrafish DNA sequence from clone CH211-247C16 ... 40 7.0
26gb|AC127233.2| Mus musculus BAC clone RP24-559K11 from chromosom... 40 7.0
27gb|AC104396.7| Mus musculus BAC clone RP23-413J8 from chromosome... 40 7.0
28emb|CR848687.8| Zebrafish DNA sequence from clone DKEY-46H11 in ... 40 7.0
29ref|NM_001031118.1| Gallus gallus similar to RIKEN cDNA 2900009I... 40 7.0
30emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome... 40 7.0
31emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 7.0
32emb|AL583923.1|MLEPRTN7 Mycobacterium leprae strain TN complete ... 40 7.0
33emb|AJ719697.1| Gallus gallus mRNA for hypothetical protein, clo... 40 7.0
34gb|AC022558.9| Homo sapiens chromosome 15, clone RP11-90B9, comp... 40 7.0
35gb|AC005713.8|AC005713 Drosophila melanogaster, chromosome 2R, r... 40 7.0
36gb|AC007520.8|AC007520 Drosophila melanogaster, chromosome 2R, r... 40 7.0
37dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
38gb|AC108009.5| Homo sapiens BAC clone RP13-486L17 from 4, comple... 40 7.0
39dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
40dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
41emb|BX284684.8| Zebrafish DNA sequence from clone DKEY-14I10 in ... 40 7.0
42gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 7.0
43emb|BX649425.3| Zebrafish DNA sequence from clone CH211-239E6 in... 40 7.0
44gb|AE003804.4| Drosophila melanogaster chromosome 2R, section 46... 40 7.0
45dbj|AP001274.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.0
46dbj|AP002427.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.0
47gb|AD000013.1|MSGY219 Mycobacterium tuberculosis sequence from c... 40 7.0
48emb|AL355887.4|CNS05TCY Human chromosome 14 DNA sequence BAC R-1... 40 7.0
49emb|AL161713.4|CNS01RHE Human chromosome 14 DNA sequence BAC R-2... 40 7.0 
>ref|XM_493785.1| Oryza sativa (japonica cultivar-group), Ozsa8504 predicted mRNA
          Length = 1314

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 83/97 (85%), Gaps = 3/97 (3%)
 Strand = Plus / Plus

                                                                        
Query: 100  cttcgatgccatcgtcttcgccaccgggtaccgcagcacggcaaagaagtggctcaagag 159
            |||||| |||||||||||||||||||| ||||| |||||  | ||| |||||||||||||
Sbjct: 1038 cttcgacgccatcgtcttcgccaccggttaccggagcaccaccaagcagtggctcaagag 1097

                                                 
Query: 160  cgacggcggcgggctgatcggtgacgatgggatggcg 196
            |||    | |||||||||||| ||||| |||||||||
Sbjct: 1098 cga---tgacgggctgatcggcgacgacgggatggcg 1131



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 81/99 (81%)
 Strand = Plus / Plus

                                                                        
Query: 212  aagggggagaatgggttgtaccgcgctgggctggcagggagagggatctacggcagcggc 271
            ||||||||||| ||| ||||| |||| ||| |||   |||| || |||||||||||||||
Sbjct: 1156 aagggggagaacgggctgtactgcgccgggatggtgaggaggggaatctacggcagcggc 1215

                                                   
Query: 272  acagacggggagttcatcgcggaggacatcagcaggcag 310
               |||| |||| ||||||| || |||||||||| ||||
Sbjct: 1216 gaggacgcggagctcatcgccgacgacatcagcaagcag 1254
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                         
Query: 100     cttcgatgccatcgtcttcgccaccgggtaccgcagcacggcaaagaagtggctcaag 157
               |||||| |||||||||||||||||||| ||||| |||||  | ||| |||||||||||
Sbjct: 9512920 cttcgacgccatcgtcttcgccaccggttaccggagcaccaccaagcagtggctcaag 9512977



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 81/99 (81%)
 Strand = Plus / Plus

                                                                           
Query: 212     aagggggagaatgggttgtaccgcgctgggctggcagggagagggatctacggcagcggc 271
               ||||||||||| ||| ||||| |||| ||| |||   |||| || |||||||||||||||
Sbjct: 9513920 aagggggagaacgggctgtactgcgccgggatggtgaggaggggaatctacggcagcggc 9513979

                                                      
Query: 272     acagacggggagttcatcgcggaggacatcagcaggcag 310
                  |||| |||| ||||||| || |||||||||| ||||
Sbjct: 9513980 gaggacgcggagctcatcgccgacgacatcagcaagcag 9514018



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                           
Query: 74      gagttcgccggcggggagcggcaccgcttcgatgccatcgtcttcgccaccgggtaccgc 133
               |||||||||| |||  |||| |||  |||||| ||| |||||||||||||||| ||||| 
Sbjct: 9491882 gagttcgccgacggccagcgccacgccttcgacgccgtcgtcttcgccaccggctaccgg 9491941

                    
Query: 134     agcac 138
               |||||
Sbjct: 9491942 agcac 9491946



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 326      ggcgatgacggaggcgatgg 345
                ||||||||||||||||||||
Sbjct: 25897389 ggcgatgacggaggcgatgg 25897370



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 169     cgggctgatcggtgacgatgggatggcg 196
               |||||||||||| ||||| |||||||||
Sbjct: 9513868 cgggctgatcggcgacgacgggatggcg 9513895



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 169     cgggctgatcggtgacgatgggatggcg 196
               |||||||||||| ||||| |||||||||
Sbjct: 9492592 cgggctgatcggcgacgacgggatggcg 9492619
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>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0424A08
          Length = 151294

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                       
Query: 100   cttcgatgccatcgtcttcgccaccgggtaccgcagcacggcaaagaagtggctcaag 157
             |||||| |||||||||||||||||||| ||||| |||||  | ||| |||||||||||
Sbjct: 46349 cttcgacgccatcgtcttcgccaccggttaccggagcaccaccaagcagtggctcaag 46406



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 81/99 (81%)
 Strand = Plus / Plus

                                                                         
Query: 212   aagggggagaatgggttgtaccgcgctgggctggcagggagagggatctacggcagcggc 271
             ||||||||||| ||| ||||| |||| ||| |||   |||| || |||||||||||||||
Sbjct: 47349 aagggggagaacgggctgtactgcgccgggatggtgaggaggggaatctacggcagcggc 47408

                                                    
Query: 272   acagacggggagttcatcgcggaggacatcagcaggcag 310
                |||| |||| ||||||| || |||||||||| ||||
Sbjct: 47409 gaggacgcggagctcatcgccgacgacatcagcaagcag 47447



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 74    gagttcgccggcggggagcggcaccgcttcgatgccatcgtcttcgccaccgggtaccgc 133
             |||||||||| |||  |||| |||  |||||| ||| |||||||||||||||| ||||| 
Sbjct: 25311 gagttcgccgacggccagcgccacgccttcgacgccgtcgtcttcgccaccggctaccgg 25370

                  
Query: 134   agcac 138
             |||||
Sbjct: 25371 agcac 25375



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 169   cgggctgatcggtgacgatgggatggcg 196
             |||||||||||| ||||| |||||||||
Sbjct: 47297 cgggctgatcggcgacgacgggatggcg 47324



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 169   cgggctgatcggtgacgatgggatggcg 196
             |||||||||||| ||||| |||||||||
Sbjct: 26021 cgggctgatcggcgacgacgggatggcg 26048
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>ref|XM_493782.1| Oryza sativa (japonica cultivar-group), Ozsa8501 predicted mRNA
          Length = 1197

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 100/123 (81%), Gaps = 3/123 (2%)
 Strand = Plus / Plus

                                                                        
Query: 74   gagttcgccggcggggagcggcaccgcttcgatgccatcgtcttcgccaccgggtaccgc 133
            |||||||||| |||  |||| |||  |||||| ||| |||||||||||||||| ||||| 
Sbjct: 910  gagttcgccgacggccagcgccacgccttcgacgccgtcgtcttcgccaccggctaccgg 969

                                                                        
Query: 134  agcacggcaaagaagtggctcaagagcgacggcggcgggctgatcggtgacgatgggatg 193
            |||||  | ||| | ||||||||||| ||    | |||||||||||| ||||| ||||||
Sbjct: 970  agcaccaccaagcactggctcaagagtga---tgacgggctgatcggcgacgacgggatg 1026

               
Query: 194  gcg 196
            |||
Sbjct: 1027 gcg 1029
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>dbj|AK109645.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-H02, full
            insert sequence
          Length = 1384

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 100/123 (81%), Gaps = 3/123 (2%)
 Strand = Plus / Plus

                                                                        
Query: 74   gagttcgccggcggggagcggcaccgcttcgatgccatcgtcttcgccaccgggtaccgc 133
            |||||||||| |||  |||| |||  |||||| ||| |||||||||||||||| ||||| 
Sbjct: 944  gagttcgccgacggccagcgccacgccttcgacgccgtcgtcttcgccaccggctaccgg 1003

                                                                        
Query: 134  agcacggcaaagaagtggctcaagagcgacggcggcgggctgatcggtgacgatgggatg 193
            |||||  | ||| | ||||||||||| ||    | |||||||||||| ||||| ||||||
Sbjct: 1004 agcaccaccaagcactggctcaagagtga---tgacgggctgatcggcgacgacgggatg 1060

               
Query: 194  gcg 196
            |||
Sbjct: 1061 gcg 1063
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>gb|DQ415456.1| Antheraea roylii D-loop, complete sequence; mitochondrial
          Length = 587

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 481 ttaaatattttaatataagaaaa 503
           |||||||||||||||||||||||
Sbjct: 351 ttaaatattttaatataagaaaa 329
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>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09,
             complete sequence
          Length = 96079

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 79    cgccggcggggagcggcaccgc 100
             ||||||||||||||||||||||
Sbjct: 16757 cgccggcggggagcggcaccgc 16778
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 79       cgccggcggggagcggcaccgc 100
                ||||||||||||||||||||||
Sbjct: 20913533 cgccggcggggagcggcaccgc 20913554
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>dbj|AK111485.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-G05, full
           insert sequence
          Length = 1070

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 79  cgccggcggggagcggcaccgc 100
           ||||||||||||||||||||||
Sbjct: 497 cgccggcggggagcggcaccgc 476
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>gb|AC169813.2| Rhesus Macaque  BAC CH250-16M3 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 168861

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 483    aaatattttaatataagaaaa 503
              |||||||||||||||||||||
Sbjct: 164810 aaatattttaatataagaaaa 164830
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 95      caccgcttcgatgccatcgtc 115
               |||||||||||||||||||||
Sbjct: 3204687 caccgcttcgatgccatcgtc 3204667
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 107     gccatcgtcttcgccaccggg 127
               |||||||||||||||||||||
Sbjct: 2041528 gccatcgtcttcgccaccggg 2041508
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>emb|CR749774.14| Zebrafish DNA sequence from clone CH211-167E20 in linkage group 8,
             complete sequence
          Length = 132644

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 483   aaatattttaatataagaaaa 503
             |||||||||||||||||||||
Sbjct: 92714 aaatattttaatataagaaaa 92734
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 102     tcgatgccatcgtcttcgccaccgg 126
               |||| ||||||||||||||||||||
Sbjct: 2082287 tcgacgccatcgtcttcgccaccgg 2082311
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>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 160    cgacggcggcgggctgatcgg 180
              |||||||||||||||||||||
Sbjct: 153383 cgacggcggcgggctgatcgg 153403
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>gb|AE005753.1| Caulobacter crescentus CB15 section 79 of 359 of the complete genome
          Length = 10329

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 102  tcgatgccatcgtcttcgccaccgg 126
            |||| ||||||||||||||||||||
Sbjct: 2978 tcgacgccatcgtcttcgccaccgg 2954
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>gb|AC026115.27| Homo sapiens 12 BAC RP11-1026F22 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 99545

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 483   aaatattttaatataagaaaa 503
             |||||||||||||||||||||
Sbjct: 62054 aaatattttaatataagaaaa 62034
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>emb|CR792414.6| Zebrafish DNA sequence from clone CH211-95O10 in linkage group 4,
            complete sequence
          Length = 66595

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 484  aatattttaatataagaaaat 504
            |||||||||||||||||||||
Sbjct: 6671 aatattttaatataagaaaat 6651
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>emb|BX901908.8| Zebrafish DNA sequence from clone DKEY-268B12 in linkage group 4,
              complete sequence
          Length = 210697

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 484    aatattttaatataagaaaat 504
              |||||||||||||||||||||
Sbjct: 124826 aatattttaatataagaaaat 124806
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>emb|AL954657.14| Zebrafish DNA sequence from clone CH211-223E21 in linkage group 4,
              complete sequence
          Length = 200352

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 484    aatattttaatataagaaaat 504
              |||||||||||||||||||||
Sbjct: 178600 aatattttaatataagaaaat 178580
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>gb|DQ322651.1| Streptomyces sp. FR1 plasmid pFRL1, complete sequence
          Length = 54288

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 74    gagttcgccggcggggagcgg 94
             |||||||||||||||||||||
Sbjct: 36682 gagttcgccggcggggagcgg 36662
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>ref|NM_192293.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 753

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 ggcgatgacggaggcgatgg 345
           ||||||||||||||||||||
Sbjct: 447 ggcgatgacggaggcgatgg 428
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   cgacggcggcgggctgatcg 179
             ||||||||||||||||||||
Sbjct: 48312 cgacggcggcgggctgatcg 48293
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>ref|XM_420224.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 2900009I07
           (LOC422236), mRNA
          Length = 1174

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 gagcgacggcggcgggctga 176
           ||||||||||||||||||||
Sbjct: 144 gagcgacggcggcgggctga 163
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>emb|BX323794.17| Zebrafish DNA sequence from clone CH211-247C16 in linkage group 17,
             complete sequence
          Length = 91210

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 483   aaatattttaatataagaaa 502
             ||||||||||||||||||||
Sbjct: 43813 aaatattttaatataagaaa 43794
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>gb|AC127233.2| Mus musculus BAC clone RP24-559K11 from chromosome 3, complete sequence
          Length = 160255

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 483    aaatattttaatataagaaa 502
              ||||||||||||||||||||
Sbjct: 146259 aaatattttaatataagaaa 146240
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>gb|AC104396.7| Mus musculus BAC clone RP23-413J8 from chromosome 3, complete sequence
          Length = 195860

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 483    aaatattttaatataagaaa 502
              ||||||||||||||||||||
Sbjct: 175778 aaatattttaatataagaaa 175797
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>emb|CR848687.8| Zebrafish DNA sequence from clone DKEY-46H11 in linkage group 7,
             complete sequence
          Length = 87887

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 481   ttaaatattttaatataagaaaat 504
             |||||||||||||||||| |||||
Sbjct: 20044 ttaaatattttaatataaaaaaat 20021
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>ref|NM_001031118.1| Gallus gallus similar to RIKEN cDNA 2900009I07 (LOC422237), mRNA
          Length = 3016

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 gagcgacggcggcgggctga 176
           ||||||||||||||||||||
Sbjct: 307 gagcgacggcggcgggctga 326
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>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13
          Length = 341957

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   cgacggcggcgggctgatcg 179
             ||||||||||||||||||||
Sbjct: 48368 cgacggcggcgggctgatcg 48349
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>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             1/14
          Length = 343050

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   cgacggcggcgggctgatcg 179
             ||||||||||||||||||||
Sbjct: 48352 cgacggcggcgggctgatcg 48333
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>emb|AL583923.1|MLEPRTN7 Mycobacterium leprae strain TN complete genome; segment 7/10
          Length = 348950

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 91    gcggcaccgcttcgatgccatcgt 114
             ||||||| ||||||||||||||||
Sbjct: 81629 gcggcactgcttcgatgccatcgt 81606
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>emb|AJ719697.1| Gallus gallus mRNA for hypothetical protein, clone 5g5
          Length = 3043

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 gagcgacggcggcgggctga 176
           ||||||||||||||||||||
Sbjct: 307 gagcgacggcggcgggctga 326
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>gb|AC022558.9| Homo sapiens chromosome 15, clone RP11-90B9, complete sequence
          Length = 186403

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 474   aagatgcttaaatattttaa 493
             ||||||||||||||||||||
Sbjct: 37871 aagatgcttaaatattttaa 37890
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>gb|AC005713.8|AC005713 Drosophila melanogaster, chromosome 2R, region 54A1-54B2, BAC clone
             BACR48A11, complete sequence
          Length = 157507

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 470   acataagatgcttaaatatt 489
             ||||||||||||||||||||
Sbjct: 74999 acataagatgcttaaatatt 75018
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>gb|AC007520.8|AC007520 Drosophila melanogaster, chromosome 2R, region 53D-54A, BAC clone
              BACR11M15, complete sequence
          Length = 170994

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 470    acataagatgcttaaatatt 489
              ||||||||||||||||||||
Sbjct: 147637 acataagatgcttaaatatt 147656
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 156      agagcgacggcggcgggctg 175
                ||||||||||||||||||||
Sbjct: 23574201 agagcgacggcggcgggctg 23574182
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>gb|AC108009.5| Homo sapiens BAC clone RP13-486L17 from 4, complete sequence
          Length = 58375

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 484   aatattttaatataagaaaa 503
             ||||||||||||||||||||
Sbjct: 53114 aatattttaatataagaaaa 53133
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>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0510C12
          Length = 177049

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 326    ggcgatgacggaggcgatgg 345
              ||||||||||||||||||||
Sbjct: 137313 ggcgatgacggaggcgatgg 137294
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>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0481H08
          Length = 146841

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   agagcgacggcggcgggctg 175
             ||||||||||||||||||||
Sbjct: 55165 agagcgacggcggcgggctg 55146
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>emb|BX284684.8| Zebrafish DNA sequence from clone DKEY-14I10 in linkage group 8, complete
              sequence
          Length = 163766

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 481    ttaaatattttaatataaga 500
              ||||||||||||||||||||
Sbjct: 149892 ttaaatattttaatataaga 149911
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 482    taaatattttaatataagaa 501
              ||||||||||||||||||||
Sbjct: 506817 taaatattttaatataagaa 506798
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>emb|BX649425.3| Zebrafish DNA sequence from clone CH211-239E6 in linkage group 4,
             complete sequence
          Length = 133503

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   gatgcttaaatattttaata 495
             ||||||||||||||||||||
Sbjct: 62155 gatgcttaaatattttaata 62174
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>gb|AE003804.4| Drosophila melanogaster chromosome 2R, section 46 of 73 of the complete
              sequence
          Length = 260337

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 470    acataagatgcttaaatatt 489
              ||||||||||||||||||||
Sbjct: 210762 acataagatgcttaaatatt 210781
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>dbj|AP001274.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-840J5, complete
             sequence
          Length = 210282

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 485   atattttaatataagaaaat 504
             ||||||||||||||||||||
Sbjct: 89861 atattttaatataagaaaat 89880
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>dbj|AP002427.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-90I16, complete
              sequence
          Length = 154159

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 485    atattttaatataagaaaat 504
              ||||||||||||||||||||
Sbjct: 153582 atattttaatataagaaaat 153601
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>gb|AD000013.1|MSGY219 Mycobacterium tuberculosis sequence from clone y219
          Length = 38721

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   cgacggcggcgggctgatcg 179
             ||||||||||||||||||||
Sbjct: 13346 cgacggcggcgggctgatcg 13365
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>emb|AL355887.4|CNS05TCY Human chromosome 14 DNA sequence BAC R-179O11 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 159183

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 482    taaatattttaatataagaa 501
              ||||||||||||||||||||
Sbjct: 149652 taaatattttaatataagaa 149633
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>emb|AL161713.4|CNS01RHE Human chromosome 14 DNA sequence BAC R-22K10 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 157383

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 482    taaatattttaatataagaa 501
              ||||||||||||||||||||
Sbjct: 157361 taaatattttaatataagaa 157380


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,194,671
Number of Sequences: 3902068
Number of extensions: 4194671
Number of successful extensions: 101340
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100729
Number of HSP's gapped (non-prelim): 608
length of query: 516
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 493
effective length of database: 17,143,297,704
effective search space: 8451645768072
effective search space used: 8451645768072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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