ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25l10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CF105_HUMAN (Q96IZ2) Protein C6orf105 32 0.55
2TNP6_ENTFC (Q06238) Transposase for transposon Tn1546 29 3.5
3DGK3_CAEEL (Q03603) Probable diacylglycerol kinase 3 (EC 2.7.1.1... 28 7.9
4POLG_HRV1B (P12916) Genome polyprotein [Contains: Coat protein V... 28 7.9

>CF105_HUMAN (Q96IZ2) Protein C6orf105|
          Length = 230

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = +1

Query: 7   WQGKVPYWESYEPG*GNKDDSKSSFQA*GLSLMEITFLCLLMRIY*YGRRKLKDILSQAK 186
           W   + Y+ S E     KD+ K    A G     +T L LL++   YG   L D+L + K
Sbjct: 16  WYTFLNYYISQE----GKDEVKPKILANGARWKYMTLLNLLLQTIFYGVTCLDDVLKRTK 71

Query: 187 LXKSVKFYNIY 219
             K +KF   +
Sbjct: 72  GGKDIKFLTAF 82



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>TNP6_ENTFC (Q06238) Transposase for transposon Tn1546|
          Length = 988

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 117 PLPLNEDILIWAKETQGYLIPGKAXKISEVLQYLR 221
           P   N+ IL W KE  G+  P    KI E L+Y+R
Sbjct: 205 PSESNKTILGWLKEPPGHPSPETFLKIIERLEYIR 239



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>DGK3_CAEEL (Q03603) Probable diacylglycerol kinase 3 (EC 2.7.1.107)|
           (Diglyceride kinase 3) (DGK-3) (DAG kinase 3)
          Length = 812

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 145 YGRRKLKDILSQAKLXKSVKFYNIYGIDYET 237
           Y RRKLKD+LS     +  KFY+   +D +T
Sbjct: 17  YSRRKLKDMLSD--FQQDGKFYSYLSVDGQT 45



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>POLG_HRV1B (P12916) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2156

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -2

Query: 128  KRQRNVISIRDNPHAWKELFESSLLPHPGSYDSQYGTFPC 9
            K +     I+  PH W E+ ES   P    Y+   G  PC
Sbjct: 918  KHKNRYYPIKVTPHDWYEIQESEYYPKHIQYNLLIGEGPC 957


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,175,982
Number of Sequences: 219361
Number of extensions: 688605
Number of successful extensions: 1615
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1615
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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