ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25l10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473883.1| Oryza sativa (japonica cultivar-group), predic... 117 2e-23
2dbj|AK069739.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 2e-23
3emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4,... 92 1e-15
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
5gb|AE009952.1| Yersinia pestis KIM, complete genome 42 0.93
6gb|AC164313.3| Mus musculus BAC clone RP23-24F12 from chromosome... 42 0.93
7gb|AC164662.6| Mus musculus 10 BAC RP24-279D11 (Roswell Park Can... 42 0.93
8gb|AC141561.5| Mus musculus BAC clone RP23-457C15 from chromosom... 42 0.93
9gb|AC114802.5| Homo sapiens BAC clone RP11-790N8 from 2, complet... 42 0.93
10gb|AC153496.4| Mus musculus 10 BAC RP23-373D1 (Roswell Park Canc... 42 0.93
11ref|XM_630211.1| Dictyostelium discoideum hypothetical protein (... 40 3.7
12gb|AC139335.3| Mus musculus BAC clone RP23-376N11 from chromosom... 40 3.7
13emb|CR318627.19| Zebrafish DNA sequence from clone DKEYP-97F4 in... 40 3.7
14ref|XM_726175.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 3.7
15emb|CR352228.11| Zebrafish DNA sequence from clone CH211-104F13 ... 40 3.7
16emb|AL845174.4| Mouse DNA sequence from clone RP23-156P22 on chr... 40 3.7 
>ref|XM_473883.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1602

 Score =  117 bits (59), Expect = 2e-23
 Identities = 177/214 (82%), Gaps = 2/214 (0%)
 Strand = Plus / Plus

                                                                        
Query: 47   gatgaggcaataaagatgattcaaaaagctctttccaagcatgaggattatctctgatgg 106
            ||||| |||||||| ||||||  | |||||||||||||||||||| || || ||||||||
Sbjct: 874  gatgaagcaataaaaatgattagagaagctctttccaagcatgag-atcatttctgatgg 932

                                                                        
Query: 107  aaatcacattcctctgcctcttaatgaggatatattaatatgggcgaaggaaactcaagg 166
             |  ||||||||  |||| ||| ||  ||||||||| | |||||| || || || || ||
Sbjct: 933  tatgcacattccattgccccttgatatggatatattgagatgggcaaaagagacaca-gg 991

                                                                        
Query: 167  atatcttatcccaggcaaagcttncaaaatcagtgaagttctacaatatttacgggattg 226
            || | || | | | ||||||||| ||||||||||||||||||||||||||||||| | ||
Sbjct: 992  atgttttgtgcaatgcaaagcttccaaaatcagtgaagttctacaatatttacggaactg 1051

                                              
Query: 227  attatgagactgctcatactgtttgctacgggag 260
            ||||||| ||||| ||||| ||| ||||||||||
Sbjct: 1052 attatgacactgcccataccgttcgctacgggag 1085
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>dbj|AK069739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027J22, full
            insert sequence
          Length = 2334

 Score =  117 bits (59), Expect = 2e-23
 Identities = 177/214 (82%), Gaps = 2/214 (0%)
 Strand = Plus / Plus

                                                                        
Query: 47   gatgaggcaataaagatgattcaaaaagctctttccaagcatgaggattatctctgatgg 106
            ||||| |||||||| ||||||  | |||||||||||||||||||| || || ||||||||
Sbjct: 1308 gatgaagcaataaaaatgattagagaagctctttccaagcatgag-atcatttctgatgg 1366

                                                                        
Query: 107  aaatcacattcctctgcctcttaatgaggatatattaatatgggcgaaggaaactcaagg 166
             |  ||||||||  |||| ||| ||  ||||||||| | |||||| || || || || ||
Sbjct: 1367 tatgcacattccattgccccttgatatggatatattgagatgggcaaaagagacaca-gg 1425

                                                                        
Query: 167  atatcttatcccaggcaaagcttncaaaatcagtgaagttctacaatatttacgggattg 226
            || | || | | | ||||||||| ||||||||||||||||||||||||||||||| | ||
Sbjct: 1426 atgttttgtgcaatgcaaagcttccaaaatcagtgaagttctacaatatttacggaactg 1485

                                              
Query: 227  attatgagactgctcatactgtttgctacgggag 260
            ||||||| ||||| ||||| ||| ||||||||||
Sbjct: 1486 attatgacactgcccataccgttcgctacgggag 1519
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>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17,
             complete sequence
          Length = 133279

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                         
Query: 181   gcaaagcttncaaaatcagtgaagttctacaatatttacgggattgattatgagactgct 240
             ||||||||| ||||||||||||||||||||||||||||||| | ||||||||| ||||| 
Sbjct: 73552 gcaaagcttccaaaatcagtgaagttctacaatatttacggaactgattatgacactgcc 73611

                  
Query: 241   catac 245
             |||||
Sbjct: 73612 catac 73616



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 47    gatgaggcaataaagatgattcaaaaagctctttccaagcatgagg 92
             ||||| |||||||| ||||||  | |||||||||||||||||||||
Sbjct: 73327 gatgaagcaataaaaatgattagagaagctctttccaagcatgagg 73372
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                            
Query: 181      gcaaagcttncaaaatcagtgaagttctacaatatttacgggattgattatgagactgct 240
                ||||||||| ||||||||||||||||||||||||||||||| | ||||||||| ||||| 
Sbjct: 31251950 gcaaagcttccaaaatcagtgaagttctacaatatttacggaactgattatgacactgcc 31252009

                     
Query: 241      catac 245
                |||||
Sbjct: 31252010 catac 31252014



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 47       gatgaggcaataaagatgattcaaaaagctctttccaagcatgagg 92
                ||||| |||||||| ||||||  | |||||||||||||||||||||
Sbjct: 31251725 gatgaagcaataaaaatgattagagaagctctttccaagcatgagg 31251770
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 127     ttaatgaggatatattaatat 147
               |||||||||||||||||||||
Sbjct: 3576189 ttaatgaggatatattaatat 3576169
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>gb|AC164313.3| Mus musculus BAC clone RP23-24F12 from chromosome 3, complete sequence
          Length = 196368

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 54     caataaagatgattcaaaaag 74
              |||||||||||||||||||||
Sbjct: 112141 caataaagatgattcaaaaag 112121
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>gb|AC164662.6| Mus musculus 10 BAC RP24-279D11 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 154482

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 192    aaaatcagtgaagttctacaa 212
              |||||||||||||||||||||
Sbjct: 112195 aaaatcagtgaagttctacaa 112215
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>gb|AC141561.5| Mus musculus BAC clone RP23-457C15 from chromosome 3, complete sequence
          Length = 169547

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 54    caataaagatgattcaaaaag 74
             |||||||||||||||||||||
Sbjct: 67763 caataaagatgattcaaaaag 67743
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>gb|AC114802.5| Homo sapiens BAC clone RP11-790N8 from 2, complete sequence
          Length = 154814

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 107   aaatcacattcctctgcctct 127
             |||||||||||||||||||||
Sbjct: 10713 aaatcacattcctctgcctct 10733
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>gb|AC153496.4| Mus musculus 10 BAC RP23-373D1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 149839

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 192   aaaatcagtgaagttctacaa 212
             |||||||||||||||||||||
Sbjct: 18930 aaaatcagtgaagttctacaa 18910
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>ref|XM_630211.1| Dictyostelium discoideum hypothetical protein (DDB0191589), partial
            mRNA
          Length = 7659

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   ggcaataaagatgattcaaa 71
            ||||||||||||||||||||
Sbjct: 4915 ggcaataaagatgattcaaa 4934
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>gb|AC139335.3| Mus musculus BAC clone RP23-376N11 from chromosome 10, complete
             sequence
          Length = 195132

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   attcctctgcctcttaatga 133
             ||||||||||||||||||||
Sbjct: 86931 attcctctgcctcttaatga 86912
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>emb|CR318627.19| Zebrafish DNA sequence from clone DKEYP-97F4 in linkage group 23,
            complete sequence
          Length = 176131

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 223  attgattatgagactgctca 242
            ||||||||||||||||||||
Sbjct: 6816 attgattatgagactgctca 6835
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>ref|XM_726175.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03273)
           partial mRNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  aataaagatgattcaaaaag 74
           ||||||||||||||||||||
Sbjct: 664 aataaagatgattcaaaaag 683
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>emb|CR352228.11| Zebrafish DNA sequence from clone CH211-104F13 in linkage group 23,
             complete sequence
          Length = 175139

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   attgattatgagactgctca 242
             ||||||||||||||||||||
Sbjct: 20232 attgattatgagactgctca 20251
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>emb|AL845174.4| Mouse DNA sequence from clone RP23-156P22 on chromosome 2, complete
              sequence
          Length = 216475

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    aatcacattcctctgcctct 127
              ||||||||||||||||||||
Sbjct: 194455 aatcacattcctctgcctct 194436


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,617,605
Number of Sequences: 3902068
Number of extensions: 2617605
Number of successful extensions: 45853
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45793
Number of HSP's gapped (non-prelim): 60
length of query: 282
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 260
effective length of database: 17,147,199,772
effective search space: 4458271940720
effective search space used: 4458271940720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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